# terms

id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: FYPO:0000191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the establishment or maintenance of cell polarity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of establishment or maintenance of cell polarity","synonyms":[{"name":"abnormal regulation of establishment or maintenance of cell polarity during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of establishment or maintenance of cell polarity during vegetative growth","type":"exact"}],"termid":"FYPO:0000191"}


id: PBO:0088896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis RNA-binding protein Mrd1","termid":"PBO:0088896"}


id: PBO:0065718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 4","termid":"PBO:0065718"}


id: PBO:0046347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 5","termid":"PBO:0046347"}


id: PBO:0068872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 112, pseudogene","termid":"PBO:0068872"}


id: PBO:0052046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 2","termid":"PBO:0052046"}


id: GO:0140717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont into host plant tissue via the stromata, microscopic pores in the epidermis of the aerial parts of terrestrial plants. These pores are essential for photosynthesis, as they allow CO2 to diffuse into the plant. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17419713","PMID:29307013","PMID:16959560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host through the stromata","termid":"GO:0140717"}


id: PBO:0070139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 53 pseudogene","termid":"PBO:0070139"}


id: PBO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as ncRNA","termid":"PBO:0000406"}


id: PBO:0060685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-deacetylase and N-sulfotransferase 1","termid":"PBO:0060685"}


id: GO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune system process","synonyms":[{"name":"down regulation of immune system process","type":"exact"},{"name":"down-regulation of immune system process","type":"exact"},{"name":"downregulation of immune system process","type":"exact"},{"name":"inhibition of immune system process","type":"narrow"}],"termid":"GO:0002683"}


id: PBO:0036301
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative splicing","termid":"PBO:0036301"}


id: PBO:0051611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 36 alpha","termid":"PBO:0051611"}


id: GO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["PMID:11527960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"D-amino acid catabolic process","termid":"GO:0019478"},{"relation_name":"is_a","term_name":"D-cysteine metabolic process","termid":"GO:0046438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"D-cysteine catabolic process","synonyms":[{"name":"D-cysteine breakdown","type":"exact"},{"name":"D-cysteine catabolism","type":"exact"},{"name":"D-cysteine degradation","type":"exact"}],"termid":"GO:0019447"}


id: MOD:01804
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a glycosylphosphate through a phosphodiester bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphorylated residue","termid":"MOD:01804"}


id: PBO:0014234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit ubiquitin-protein ligase E3","termid":"PBO:0014234"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PR:Q9US03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.10","synonyms":[{"name":"Spom972h-klp2","type":"exact"}],"termid":"PR:Q9US03"}


id: PBO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-chromosome Associated Protein","termid":"PBO:0016578"}


id: FYPO:0000825
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115591,115589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115592,115590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is higher than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03118","SJAG_03689"],"name":"increased RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0001247","FYPO:0000910","FYPO:0002936"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation during vegetative growth","type":"related"},{"name":"RNA accumulation: increased during vegetative growth","type":"related"},{"name":"increased RNA accumulation during vegetative growth","type":"related"},{"name":"increased RNA level during mitotic cell cycle","type":"related"},{"name":"increased cellular RNA level during vegetative growth","type":"exact"},{"name":"increased cellular mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA accumulation during vegetative growth","type":"related"},{"name":"increased mRNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA level during vegetative growth","type":"narrow"},{"name":"increased mRNA transcript level during vegetative growth","type":"narrow"},{"name":"increased messenger RNA level during vegetative growth","type":"narrow"},{"name":"increased transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0000825","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null}}


id: GO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal tyrosine from a peptide.","definition_xrefs":["ISBN:0198506732","GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine aminopeptidase activity (obsolete GO:0009983)","synonyms":[{"name":"tyrosine aminopeptidase activity","type":"exact"}],"termid":"GO:0009983"}


id: PBO:0077090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 5","termid":"PBO:0077090"}


id: GO:0005648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, beta-subunit (obsolete GO:0005648)","synonyms":[{"name":"importin, beta-subunit","type":"exact"},{"name":"karyopherin-beta1","type":"exact"}],"termid":"GO:0005648"}


id: GO:0034772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by addition of two methyl groups to lysine at position 20 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 dimethylation (obsolete GO:0034772)","synonyms":[{"name":"histone H4 K20 dimethylation","type":"exact"},{"name":"histone lysine H4 K20 dimethylation","type":"exact"}],"termid":"GO:0034772"}


id: FYPO:0005313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which maintenance of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Maintenance of mitotic sister chromatid cohesion is the process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the mitotic spindle, and congress to the metaphase plate.","definition_xrefs":["GO:0034088","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"normal maintenance of mitotic chromosome cohesion","type":"exact"},{"name":"normal maintenance of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal maintenance of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005313"}


id: PBO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase Adh4","termid":"PBO:0000161"}


id: PBO:0064598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 1","termid":"PBO:0064598"}


id: PR:O14299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wis4 gene.","definition_xrefs":["UniProtKB:O14299","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase wis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.02","synonyms":[{"name":"MAP kinase kinase kinase wak1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAP kinase kinase kinase wik1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-wis4","type":"exact"}],"termid":"PR:O14299"}


id: PBO:0004015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G10 protein","termid":"PBO:0004015"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: PBO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 49","termid":"PBO:0039553"}


id: PBO:0069562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 834, pseudogene","termid":"PBO:0069562"}


id: PBO:0066039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 8","termid":"PBO:0066039"}


id: PBO:0029776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_curved,_elongated_vegetative_cell","termid":"PBO:0029776"}


id: PBO:0079308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 4","termid":"PBO:0079308"}


id: PBO:0026720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_localization_to_chromatin_at_protein_coding_gene","termid":"PBO:0026720"}


id: GO:0060925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to ventricular cardiac muscle cell fates and their capacity to differentiate into cardiac muscle cells of the ventricle. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell fate commitment","termid":"GO:0060923"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell differentiation","termid":"GO:0055012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell fate commitment","synonyms":[{"name":"ventricular cardiomyocyte cell fate commitment","type":"exact"},{"name":"ventricular heart muscle cell fate commitment","type":"exact"}],"termid":"GO:0060925"}


id: PBO:0058956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase interacting serine/threonine kinase 2 pseudogene 1","termid":"PBO:0058956"}


id: GO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"positively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"positive regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"positive regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080038"}


id: GO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the coronary sinus valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve formation","termid":"GO:0003191"}


id: GO:0048224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of lignin in the form of a three-dimensional polymeric network. Lignins are complex racemic aromatic heteropolymers derived from a variety of phenylpropane monomers coupled together by an assortment of carbon-carbon and ether linkages. Lignin is crucial for structural integrity of the cell wall and stiffness and strength of the stem. In addition, lignin waterproofs the cell wall, enabling transport of water and solutes through the vascular system, and plays a role in protecting plants against pathogens.","definition_xrefs":["PMID:14503002","GOC:jid","PMID:16662709","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"lignin network","termid":"GO:0048224"}


id: MOD:00739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a cluster of iron and sulfur atoms for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster containing modification","synonyms":[{"name":"FeSRes","type":"exact"}],"termid":"MOD:00739"}


id: PR:O74927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.10","synonyms":[{"name":"Spom972h-met11","type":"exact"}],"termid":"PR:O74927"}


id: GO:0033398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zeatin, 2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin biosynthetic process","termid":"GO:0009691"},{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"},{"relation_name":"is_a","term_name":"purine-containing compound biosynthetic process","termid":"GO:0072522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zeatin biosynthetic process","synonyms":[{"name":"zeatin anabolism","type":"exact"},{"name":"zeatin biosynthesis","type":"exact"},{"name":"zeatin formation","type":"exact"},{"name":"zeatin synthesis","type":"exact"}],"termid":"GO:0033398"}


id: PBO:0036298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg101","termid":"PBO:0036298"}


id: PBO:0082313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the eIF2 translation initiation factor complex; regulates translational initiation; conserved residues of this ATP-Grasp protein that bind to ATP-Mg2+ in the pombe ortholog are required for complex assembly in budding yeast; interaction with eIF2 subunit Gcd11p facilitates complex assembly and activity; required for the START transition and timely progression through G2; regulated by nutrient availability; human ortholog complements the yeast mutant","termid":"PBO:0082313"}


id: PBO:0041551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 12","termid":"PBO:0041551"}


id: GO:0006932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The translocation of the cell body forward during cell migration, mediated by tractional force on its substrate and tension in the cortical cytoskeleton. Adhesions transmit propulsive forces and serve as traction points over which the cell moves.","definition_xrefs":["PMID:11944043","PMID:14657486","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell contraction","synonyms":[{"name":"substrate-bound cell migration, cell contraction","type":"exact"}],"termid":"GO:0006932"}


id: PATO:0001535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with small spots, patches, or specks of hue or degree of saturation differing from that of the background.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dappled","synonyms":[{"name":"speckled","type":"related"}],"termid":"PATO:0001535"}


id: GO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the plasma membrane-derived thylakoid, containing either both large and small subunits or just small subunits. It carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatophore ribulose bisphosphate carboxylase complex","termid":"GO:0048494"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"},{"name":"plasma membrane ribulose bisphosphate carboxylase complex","type":"exact"},{"name":"ribulose bisphosphate carboxylase complex","type":"broad"}],"termid":"GO:0048493"}


id: PBO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Aim19","termid":"PBO:0032756"}


id: GO:0097266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.","definition_xrefs":["GOC:bf","GOC:gk","EC:1.14.13.149","PMID:21247899","PMID:20660314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-CoA 1,2-epoxidase activity","secondary_identifiers":["RHEA:32171","KEGG_REACTION:R09838"],"synonyms":[{"name":"phenylacetyl-CoA epoxidase activity","type":"exact"},{"name":"phenylacetyl-CoA monooxygenase activity","type":"related"},{"name":"ring 1,2-phenylacetyl-CoA epoxidase activity","type":"related"}],"termid":"GO:0097266"}


id: FYPO:0004938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis","termid":"FYPO:0003550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during meiosis I","synonyms":[{"name":"decreased protein accumulation during meiosis I","type":"related"},{"name":"decreased protein level during first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiosis I","type":"exact"}],"termid":"FYPO:0004938"}


id: FYPO:0000845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is abnormal. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein degradation during vegetative growth","synonyms":[{"name":"abnormal protein breakdown during vegetative growth","type":"exact"},{"name":"abnormal protein catabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein catabolism during vegetative growth","type":"exact"},{"name":"abnormal protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000845"}


id: PBO:0035762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_collapse_without_elongation","termid":"PBO:0035762"}


id: PBO:0054245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1627","termid":"PBO:0054245"}


id: GO:1904147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19260726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonylphenol","termid":"GO:1904147"}


id: PBO:0085329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol synthase; required for biosynthesis of phosphatidylinositol, which is a precursor for polyphosphoinositides, sphingolipids, and glycolipid anchors for some of the plasma membrane proteins","termid":"PBO:0085329"}


id: GO:0140341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:10029989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phosphatidylethanolamine floppase activity","synonyms":[{"name":"phosphatidylethanolamine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"}],"termid":"GO:0140341"}


id: GO:0070551
data:
  {"annotated_genes":["SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114137],"is_not":false,"summary":null,"term":"GO:0070551"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an siRNA, yielding 5'-phosphomonoesters.","definition_xrefs":["GOC:mah","PMID:15105377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"endoribonuclease activity, cleaving siRNA-paired mRNA","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9820842"],"synonyms":[{"name":"argonaute endoribonuclease activity","type":"related"}],"termid":"GO:0070551","terms_by_termid":{"GO:0070551":null}}


id: GO:0140276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heterochromatin maintenance that is involved in chromatin silencing at or near a centromere.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:21289066"],"gene_count":0,"genotype_count":0,"name":"obsolete pericentric heterochromatin maintenance (obsolete GO:0140276)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"related"},{"name":"heterochromatin maintenance involved in chromatin silencing at centromeric outer repeats","type":"exact"},{"name":"heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"}],"termid":"GO:0140276"}


id: PBO:0089913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18","termid":"PBO:0089913"}


id: GO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"}


id: PBO:0068270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 7","termid":"PBO:0068270"}


id: PBO:0113340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; well conserved across Saccharomyces species; added to genome annotation based on proteomic, translation, and evolutionary evidence","termid":"PBO:0113340"}


id: PBO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip","termid":"PBO:0030082"}


id: PR:000044701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044701"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: PBO:0051092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3","termid":"PBO:0051092"}


id: GO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of protozoan","synonyms":[{"name":"detection of protozoa","type":"exact"},{"name":"detection of protozoon","type":"exact"},{"name":"perception of protozoa","type":"related"}],"termid":"GO:0001563"}


id: PBO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate hydrolase 1B (pseudogene)","termid":"PBO:0047757"}


id: GO:1902321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methyl-branched fatty acid.","definition_xrefs":["GOC:TermGenie","PMID:15340492","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methyl-branched fatty acid metabolic process","termid":"GO:0097089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"methyl-branched fatty acid anabolism","type":"exact"},{"name":"methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"methyl-branched fatty acid formation","type":"exact"},{"name":"methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902321"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10344:SF0","OMA:SCHPO05042","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: PBO:0025543
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate dehydrogenase deficiency","termid":"PBO:0025543"}


id: PBO:0082765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair","termid":"PBO:0082765"}


id: GO:0008902
data:
  {"annotated_genes":["SJAG_04282","SJAG_02421","SJAG_02420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109666,109672,112090],"is_not":false,"summary":null,"term":"GO:0008902"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-amino-5-hydroxymethyl-2-methylpyrimidine + ATP = 4-amino-2-methyl-5-phosphomethylpyrimidine + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.49","RHEA:23096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02420":null,"SJAG_02421":null,"SJAG_04282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylpyrimidine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03471","MetaCyc:OHMETPYRKIN-RXN"],"synonyms":[{"name":"ATP:4-amino-5-hydroxymethyl-2-methylpyrimidine 5-phosphotransferase activity","type":"related"},{"name":"hydroxymethylpyrimidine kinase (phosphorylating)","type":"related"}],"termid":"GO:0008902","terms_by_termid":{"GO:0008902":null}}


id: GO:0009769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem II, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.","definition_xrefs":["ISBN:0716731363","ISBN:0816017360","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light harvesting in photosystem II","termid":"GO:0009769"}


id: PBO:0053872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1148","termid":"PBO:0053872"}


id: PBO:0056952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR-17-92a-1 cluster host gene","termid":"PBO:0056952"}


id: SO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base pair region at the 5' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:splice_donor_variant","type":"exact"},{"name":"Seattleseq:splice-donor","type":"exact"},{"name":"VAAST:splice_donor_variant","type":"exact"},{"name":"VEP:splice_donor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_DONOR","type":"exact"},{"name":"splice donor variant","type":"exact"}],"termid":"SO:0001575"}


id: PBO:0060815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEBL antisense RNA 1","termid":"PBO:0060815"}


id: GO:0006905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle transport (obsolete GO:0006905)","synonyms":[{"name":"vesicle transport","type":"exact"}],"termid":"GO:0006905"}


id: PBO:0083832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine-phosphate cytidylyltransferase; catalyzes the second step of phosphatidylethanolamine biosynthesis; involved in the maintenance of plasma membrane; similar to mammalian CTP: phosphocholine cytidylyl-transferases; inability of the null mutant to synthesize phosphatidylethanolamine and phosphatidylcholine from ethanolamine is functionally complemented by human PCYT2","termid":"PBO:0083832"}


id: PBO:0079397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 4","termid":"PBO:0079397"}


id: PBO:0030034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_leptomycin_B_binding","termid":"PBO:0030034"}


id: PBO:0063221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 1","termid":"PBO:0063221"}


id: PBO:0081783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 710","termid":"PBO:0081783"}


id: PBO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK6 antisense RNA 1","termid":"PBO:0042538"}


id: FYPO:0008256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008256"}


id: FYECO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with nitrogen containing rich medium and cells are allowed to grow for 5-12h.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 5-12h recovery in rich medium","termid":"FYECO:0000096"}


id: PBO:0050288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1A antisense RNA 1","termid":"PBO:0050288"}


id: GO:1904274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a tricellular tight junction.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:25097825","GO_REF:0000079","PMID:4203962","PMID:22640933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction assembly","termid":"GO:0120192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"tricellular tight junction assembly","synonyms":[{"name":"tricellular tight junction formation","type":"exact"}],"termid":"GO:1904274"}


id: GO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Cdc42, and CLIP-170; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP1-CLIP-170 complex","termid":"GO:0034746"}


id: PBO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30-3","termid":"PBO:0051150"}


id: PBO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 29, pseudogene","termid":"PBO:0044450"}


id: GO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + Mg2+ + protoporphyrin IX = ADP + 3 H+ + Mg-protoporphyrin IX + phosphate.","definition_xrefs":["RHEA:13961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"magnesium chelatase activity","secondary_identifiers":["EC:6.6.1.1","KEGG_REACTION:R03877","MetaCyc:RXN1F-20"],"synonyms":[{"name":"Mg-chelatase activity","type":"broad"},{"name":"Mg-protoporphyrin IX chelatase activity","type":"related"},{"name":"Mg-protoporphyrin IX magnesio-lyase activity","type":"related"},{"name":"Mg-protoporphyrin IX magnesium-lyase activity","type":"related"},{"name":"magnesium-chelatase activity","type":"related"},{"name":"magnesium-protoporphyrin IX chelatase activity","type":"related"},{"name":"magnesium-protoporphyrin chelatase activity","type":"related"},{"name":"protoporphyrin IX Mg-chelatase activity","type":"related"},{"name":"protoporphyrin IX magnesium-chelatase activity","type":"related"}],"termid":"GO:0016851"}


id: PBO:0047892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(q21)","termid":"PBO:0047892"}


id: GO:1902181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verruculogen.","definition_xrefs":["GOC:TermGenie","PMID:23649274","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"verruculogen metabolic process","termid":"GO:1902179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"verruculogen biosynthetic process","synonyms":[{"name":"verruculogen anabolism","type":"exact"},{"name":"verruculogen biosynthesis","type":"exact"},{"name":"verruculogen formation","type":"exact"},{"name":"verruculogen synthesis","type":"exact"}],"termid":"GO:1902181"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: PBO:0057167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-1","termid":"PBO:0057167"}


id: FYPO:0000824
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115591,115589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115590,115592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"},{"relation_name":"output_of","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"altered RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: abnormal","type":"related"},{"name":"abnormal RNA level","type":"exact"},{"name":"altered cellular RNA level","type":"exact"},{"name":"altered cellular mRNA level","type":"narrow"},{"name":"altered transcript level","type":"exact"}],"termid":"FYPO:0000824","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0060877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope integral membrane protein 2","termid":"PBO:0060877"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: GO:0001409
data:
  {"annotated_genes":["SJAG_00760"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111216],"is_not":false,"summary":null,"term":"GO:0001409"}]},"cv_name":"molecular_function","definition":"Enables the transfer of guanine nucleotides (GMP, GDP, and GTP) from one side of a membrane to the other.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"guanine nucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001409","terms_by_termid":{"GO:0001409":null}}


id: PR:P87169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic spindle assembly checkpoint protein MAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23168:SF0","OMA:SCHPO02796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle assembly checkpoint component mad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.04c","secondary_identifiers":["UniProtKB:P87169"],"synonyms":[{"name":"SPBC3D6.04c","type":"related"},{"name":"Spom972h-MAD1L1","type":"exact"},{"name":"mitotic arrest deficient protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87169"}


id: PBO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M (predicted)","termid":"PBO:0004328"}


id: GO:1904422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a D-galactosamine stimulus.","definition_xrefs":["PMID:12057922","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to D-galactosamine","termid":"GO:1904421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to D-galactosamine","termid":"GO:1904422"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxypseudooxynicotine hydrolase activity (obsolete GO:0034948)","termid":"GO:0034948"}


id: PBO:0065162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion protein","termid":"PBO:0065162"}


id: GO:0035196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional miRNA. Includes the cleavage of stem-loop RNA precursors into microRNAs (miRNAs). miRNAs are a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.","definition_xrefs":["GOC:rl","GOC:bc","GOC:dph","GOC:tb","PMID:15066275","GOC:aruk","PMID:28379604","PMID:23985560","PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA processing","secondary_identifiers":["GO:0030918"],"synonyms":[{"name":"gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"miRNA biogenesis","type":"related"},{"name":"miRNA biosynthetic process","type":"broad"},{"name":"miRNA maturation","type":"exact"},{"name":"miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"microRNA biogenesis","type":"exact"},{"name":"microRNA biosynthesis","type":"broad"},{"name":"microRNA biosynthetic process","type":"broad"},{"name":"microRNA metabolic process","type":"broad"},{"name":"microRNA metabolism","type":"broad"},{"name":"microRNA processing","type":"exact"},{"name":"microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035196"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: PBO:0078371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 15-1","termid":"PBO:0078371"}


id: PBO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Christianson Syndrome","termid":"PBO:0017733"}


id: FYPO:0007293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spherical vegetative cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost.","definition_xrefs":["PomBase:mah","PMID:10087262"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vegetative cell lysis","termid":"FYPO:0000647"},{"relation_name":"is_a","term_name":"inviable spherical vegetative cell","termid":"FYPO:0004104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"lysed spherical vegetative cell","synonyms":[{"name":"inviable spherical vegetative cell with cell lysis","type":"exact"}],"termid":"FYPO:0007293"}


id: GO:1901807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving capsanthin.","definition_xrefs":["MetaCyc:PWY-5174","GOC:TermGenie","GOC:yaf","PMID:10995282","UniPathway:UPA00806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsanthin metabolic process","synonyms":[{"name":"capsanthin metabolism","type":"exact"}],"termid":"GO:1901807"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:0033261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the rate or extent of the progression through the S phase of the cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of S phase (obsolete GO:0033261)","secondary_identifiers":["MetaCyc:SALVADEHYPOX-PWY","MetaCyc:SALVPURINE2-PWY","MetaCyc:PWY-5043"],"synonyms":[{"name":"regulation of S phase","type":"exact"},{"name":"regulation of S-phase","type":"exact"},{"name":"regulation of progression through S phase","type":"exact"}],"termid":"GO:0033261"}


id: GO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ionotropic glutamate receptor activity that exhibits fast gating by glutamate and acts by opening a cation channel permeable to sodium, potassium, and, in the absence of a GluR2 subunit, calcium.","definition_xrefs":["PMID:8804111","GOC:mah","PMID:10049997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"AMPA glutamate receptor activity","synonyms":[{"name":"AMPA receptor activity","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity","type":"exact"}],"termid":"GO:0004971"}


id: FYPO:0004754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle during mitosis","synonyms":[{"name":"abolished protein localization to mitotic spindle during mitotic M phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic M-phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during mitosis","type":"exact"},{"name":"protein absent from mitotic spindle during mitosis","type":"related"},{"name":"protein localisation to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to spindle abolished during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0004754"}


id: PBO:0086932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7","termid":"PBO:0086932"}


id: GO:0072240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell differentiation","termid":"GO:0072069"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell differentiation","synonyms":[{"name":"metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072240"}


id: GO:0106260
data:
  {"annotated_genes":["SJAG_00871","SJAG_03832","SJAG_03161","SJAG_03682","SJAG_00698","SJAG_00768","SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99273,108127,109464,111980,112600,112878],"is_not":false,"summary":null,"term":"GO:0106260"},{"annotations":[107960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two regions of a DNA molecule.","definition_xrefs":["PMID:29358048","PMID:30626735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"},{"relation_name":"is_a","term_name":"molecular adaptor activity","termid":"GO:0060090"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_00768":null,"SJAG_00871":null,"SJAG_01076":null,"SJAG_03161":null,"SJAG_03682":null,"SJAG_03832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA-DNA tethering activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0140564"],"synonyms":[{"name":"double-stranded DNA bridging","type":"exact"},{"name":"dsDNA bridging","type":"exact"}],"termid":"GO:0106260","terms_by_termid":{"GO:0106260":null,"GO:0140585":null}}


id: PBO:0055162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2582","termid":"PBO:0055162"}


id: PBO:0086561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene","termid":"PBO:0086561"}


id: PBO:0066009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY heterogeneous nuclear ribonucleoprotein","termid":"PBO:0066009"}


id: PBO:0051680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta B","termid":"PBO:0051680"}


id: PBO:0053122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 15","termid":"PBO:0053122"}


id: PBO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 26","termid":"PBO:0071888"}


id: PBO:0026630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maintenance_of_mitotic_sister_chromatid_cohesion","termid":"PBO:0026630"}


id: GO:0102823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol-3-rhamnoside = kaempferol 3-O-rhamnoside-7-O-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-rhamnoside-glucosyltransferase activity (obsolete GO:0102823)","termid":"GO:0102823"}


id: GO:0015494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: aromatic amino acid(out) + H+(out) = aromatic amino acid(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"aromatic amino acid:proton symporter activity","synonyms":[{"name":"aromatic amino acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015494"}


id: GO:0009202
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009202","terms_by_termid":{"GO:0009216":null}}


id: PBO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase (predicted)","termid":"PBO:0005036"}


id: SO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence CARCCCT.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv1_motif","synonyms":[{"name":"DMv1","type":"related"},{"name":"DMv1 motif","type":"exact"},{"name":"directional promoter motif v1","type":"related"}],"termid":"SO:0001165"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: PBO:0084505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific regulatory subunit of the Glc7p protein phosphatase; regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p","termid":"PBO:0084505"}


id: PBO:0085608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cystine transport; localizes to the vacuole, plasma membrane and endosome; similarity to human cystinosin, a H(+)-driven transporter involved in L-cystine export from lysosomes and implicated in the disease cystinosis; contains seven transmembrane domains; mutation is functionally complemented by human CTNS","termid":"PBO:0085608"}


id: PBO:0027538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_response_to_S-phase_DNA_damage_checkpoint_signaling","termid":"PBO:0027538"}


id: PBO:0088521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5","termid":"PBO:0088521"}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: PBO:0016965
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORnichon","termid":"PBO:0016965"}


id: GO:0016629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-en-1-yl}cyclopentyl]octanoate + NADP+ = (15Z)-12-oxophyto-10,15-dienoate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.42","RHEA:21888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"12-oxophytodienoate reductase activity","secondary_identifiers":["MetaCyc:12-OXOPHYTODIENOATE-REDUCTASE-RXN","KEGG_REACTION:R03401"],"synonyms":[{"name":"12-oxo-phytodienoate reductase activity","type":"exact"},{"name":"12-oxo-phytodienoic acid reductase activity","type":"related"},{"name":"8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0016629"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: GO:0016267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 1 O-glycan structure, Gal-beta-(1->3)-GalNAc.","definition_xrefs":["GOC:pr","PMID:10580130","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 1","termid":"GO:0016267"}


id: PBO:0046176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK3","termid":"PBO:0046176"}


id: PBO:0041181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A3","termid":"PBO:0041181"}


id: GO:0034450
data:
  {"annotated_genes":["SJAG_02685"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88795],"is_not":false,"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["PMID:17190603","PMID:10089879","GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin protein ligase activity","termid":"GO:0061630"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0004842","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-937050","Reactome:R-HSA-975122"],"synonyms":[{"name":"E4","type":"exact"}],"termid":"GO:0034450","terms_by_termid":{"GO:0034450":null}}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: GO:0000118
data:
  {"annotated_genes":["SJAG_03685","SJAG_01110","SJAG_02778","SJAG_05282","SJAG_03230","SJAG_01926","SJAG_02571","SJAG_02990","SJAG_04758","SJAG_00581","SJAG_01804","SJAG_03884","SJAG_03627","SJAG_04186","SJAG_02500","SJAG_01230","SJAG_03145","SJAG_00349","SJAG_04389","SJAG_04596","SJAG_00868","SJAG_02466","SJAG_04355","SJAG_03982","SJAG_02439","SJAG_00441","SJAG_02385","SJAG_03694","SJAG_04097","SJAG_02981","SJAG_04576","SJAG_03441","SJAG_03579","SJAG_03036","SJAG_05192","SJAG_02846","SJAG_03867","SJAG_01465","SJAG_03255","SJAG_04396","SJAG_03844","SJAG_00934","SJAG_02798"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92752],"is_not":false,"summary":null,"term":"GO:0000118"},{"annotations":[64160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070823"},{"annotations":[98873,90746,100799,74745,106548,110302,99948,101101,102820,105541,85235,77910,91550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033698"},{"annotations":[105542,98874,93323,77911,90747,91551,100800,89294,85236,110213,110303,89329,99949,102821,106549,101102,74746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070210"},{"annotations":[105543,85922,90410,89882,91987,91552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032221"},{"annotations":[89295,89330,110214,93324,100282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034967"},{"annotations":[88172,104240,109365,108179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[97070,94337,95058,110780,109225,109392,113324,88471,92753,86808,108316,105143,103960,113504,97785,84122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses histone deacetylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_00934":null,"SJAG_01110":null,"SJAG_01230":null,"SJAG_01465":null,"SJAG_01804":null,"SJAG_01926":null,"SJAG_02385":null,"SJAG_02439":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03579":null,"SJAG_03627":null,"SJAG_03685":null,"SJAG_03694":null,"SJAG_03844":null,"SJAG_03867":null,"SJAG_03884":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04186":null,"SJAG_04355":null,"SJAG_04389":null,"SJAG_04396":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04758":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"histone deacetylase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"HDAC complex","type":"exact"}],"termid":"GO:0000118","terms_by_termid":{"GO:0000118":null,"GO:0000812":null,"GO:0032221":null,"GO:0033698":null,"GO:0034967":null,"GO:0070210":null,"GO:0070823":null,"GO:0070824":null}}


id: GO:0061633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, in which the glucose is converted to glucose-6-phosphate intermediate coupled to transmembrane transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0055086","GO:0005975"],"is_obsolete":false,"name":"transport-coupled glycolytic process through glucose-6-phosphate","secondary_identifiers":["MetaCyc:GLYCOLYSIS"],"termid":"GO:0061633"}


id: PBO:0075939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain 2","termid":"PBO:0075939"}


id: PR:Q9Y7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grx3 gene.","definition_xrefs":["UniProtKB:Q9Y7N3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.06c","synonyms":[{"name":"Spom972h-grx3","type":"exact"}],"termid":"PR:Q9Y7N3"}


id: GO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Rel Homology Domain (RHD) of a protein. The RHD is found in a family of eukaryotic transcription factors, which includes NF-kappaB, Dorsal, Relish and NFAT.","definition_xrefs":["InterPro:IPR011539","Wikipedia:Rel_homology_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Rel homology domain binding","synonyms":[{"name":"RHD binding","type":"exact"}],"termid":"GO:0044197"}


id: GO:0140863
data:
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id: GO:1900295
data:
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id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95351],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: PBO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIPC PDZ domain containing family member 3","termid":"PBO:0048627"}


id: PBO:0063207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 3","termid":"PBO:0063207"}


id: PBO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYM antisense RNA 1","termid":"PBO:0045664"}


id: PBO:0072691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 2","termid":"PBO:0072691"}


id: PBO:0043935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage associated protein","termid":"PBO:0043935"}


id: PBO:0077996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF1A associated via death domain","termid":"PBO:0077996"}


id: GO:0007501
data:
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id: PBO:0082845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding metallothionein; required for wild-type copper resistance","termid":"PBO:0082845"}


id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"toluene-4-sulfonate metabolic process","termid":"GO:0018972"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: SOFP:linked_to
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linked_to","termid":"SOFP:linked_to"}


id: PBO:0043373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 3","termid":"PBO:0043373"}


id: GO:0009057
data:
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id: PR:P15258
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ral2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ral2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.05c","synonyms":[{"name":"Spom972h-ral2","type":"exact"}],"termid":"PR:P15258"}


id: PBO:0071262
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id: GO:0075197
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a neck-like structure for the purpose of penetration into its host organism. The neck-like structure connects haustorium mother cell and haustorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","Wikipedia:Haustorium"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haustorium neck formation","synonyms":[{"name":"formation of symbiont haustorium neck for entry into host","type":"related"},{"name":"symbiont haustorium neck formation for entry into host","type":"related"}],"termid":"GO:0075197"}


id: PBO:0004458
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein Spp41 (predicted)","termid":"PBO:0004458"}


id: GO:2000229
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic stellate cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast proliferation","termid":"GO:0048145"},{"relation_name":"regulates","term_name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic stellate cell proliferation","termid":"GO:2000229"}


id: GO:1901023
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-hydroxyphenylacetate.","definition_xrefs":["GOC:yaf","MetaCyc:RXN-8505","GOC:TermGenie","PMID:8550403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"4-hydroxyphenylacetate metabolic process","termid":"GO:1901022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"4-hydroxyphenylacetate catabolic process","synonyms":[{"name":"4-hydroxyphenylacetate breakdown","type":"exact"},{"name":"4-hydroxyphenylacetate catabolism","type":"exact"},{"name":"4-hydroxyphenylacetate degradation","type":"exact"}],"termid":"GO:1901023"}


id: GO:0071853
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id: FYPO:0005258
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the growth of a population of cells is increased relative to normal in the vegetative growth phase of the life cycle at high temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth at high temperature","synonyms":[{"name":"heat resistance","type":"related"},{"name":"increased cell population growth at high temperature during mitotic cell cycle","type":"related"},{"name":"increased growth at high temperature","type":"broad"},{"name":"increased vegetative cell population growth at high temperature","type":"exact"},{"name":"resistance to heat","type":"related"},{"name":"resistance to high temperature","type":"related"},{"name":"resistance to high temperature during vegetative growth","type":"related"},{"name":"resistant to heat","type":"related"}],"termid":"FYPO:0005258"}


id: PBO:0087981
data:
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id: GO:1990161
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id: PBO:0054454
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1851","termid":"PBO:0054454"}


id: GO:0070004
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of C- or N-terminal peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}


id: PBO:0043574
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IX alpha 2 chain","termid":"PBO:0043574"}


id: GO:0036437
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id: PBO:0026748
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id: GO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4) linkages in (1->4)-beta-D-glucans, to remove successive glucose units.","definition_xrefs":["EC:3.2.1.74","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-beta-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.74-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,4-beta-glucanase activity","type":"broad"},{"name":"beta-1,4-glucanase activity","type":"broad"},{"name":"exo-1,4-beta-D-glucosidase activity","type":"related"},{"name":"exo-1,4-beta-glucanase activity","type":"exact"},{"name":"exo-1,4-beta-glucosidase activity","type":"exact"},{"name":"exo-beta-1,4-glucanase activity","type":"exact"},{"name":"exo-beta-1,4-glucosidase activity","type":"exact"},{"name":"exocellulase activity","type":"exact"}],"termid":"GO:0031217"}


id: PBO:0012041
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lives if zapped","termid":"PBO:0012041"}


id: PBO:0014265
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae RAD24","termid":"PBO:0014265"}


id: PR:P22987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase kin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.06","synonyms":[{"name":"Spom972h-kin1","type":"exact"}],"termid":"PR:P22987"}


id: PBO:0040439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B1","termid":"PBO:0040439"}


id: PBO:0004648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChaC-like protein, predicted cation transport regulator","termid":"PBO:0004648"}


id: GO:1904920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of MAPK cascade involved in axon regeneration.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:20203177"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAPK cascade involved in axon regeneration (obsolete GO:1904920)","synonyms":[{"name":"regulation of ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"regulation of MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"regulation of MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"regulation of MAPK signaling involved in axon regeneration","type":"related"},{"name":"regulation of MAPK signalling involved in axon regeneration","type":"related"},{"name":"regulation of MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"regulation of MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"}],"termid":"GO:1904920"}


id: PBO:0057403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-5","termid":"PBO:0057403"}


id: GO:1905553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","GOC:nc","PMID:23201774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel branching","synonyms":[{"name":"regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905553"}


id: PBO:0072506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 35","termid":"PBO:0072506"}


id: GO:1904442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17646383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of thyroid gland epithelial cell proliferation","termid":"GO:1904441"},{"relation_name":"negatively_regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"down regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"down-regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"downregulation of Hurthle cell proliferation","type":"narrow"},{"name":"downregulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"downregulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"inhibition of Hurthle cell proliferation","type":"narrow"},{"name":"inhibition of thyroid follicular cell proliferation","type":"narrow"},{"name":"inhibition of thyroid gland epithelial cell proliferation","type":"narrow"},{"name":"negative regulation of Hurthle cell proliferation","type":"narrow"},{"name":"negative regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904442"}


id: PBO:0063651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 8","termid":"PBO:0063651"}


id: GO:0052221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052221)","synonyms":[{"name":"positive chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052221"}


id: MOD:01878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-threonine residue to L-threonine 5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["RESID:AA0554","PubMed:20961038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine 5-hydroxyoxazole-4-carbonthionic acid","synonyms":[{"name":"(4Z)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4-(sulfanylmethylidene)-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"CROSSLNK Threonine 5-hydroxy-oxazole-4-carbonthionic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine 5-hydroxy-oxazole-4-carbonthionic acid","type":"exact"}],"termid":"MOD:01878"}


id: PBO:0041528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 90","termid":"PBO:0041528"}


id: FYPO:0004798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:25891897","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished azygotic meiosis II","synonyms":[{"name":"abolished azygotic second meiotic nuclear division","type":"exact"},{"name":"abolished meiosis II during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004798"}


id: PBO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 4","termid":"PBO:0046286"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: GO:0070729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cyclic nucleotide, any nucleotide in which phosphate group is in diester linkage to two positions on the sugar residue, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cyclic nucleotide transport","termid":"GO:0070729"}


id: PBO:0063537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation and apoptosis adaptor protein 15","termid":"PBO:0063537"}


id: PBO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 16","termid":"PBO:0070884"}


id: PBO:0087701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RES complex; RES complex is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern due to a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids","termid":"PBO:0087701"}


id: PBO:0071383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 6","termid":"PBO:0071383"}


id: FYPO:0005801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the cell tip occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell tip","type":"exact"},{"name":"slow protein movement within plasma membrane at cell tip","type":"exact"}],"termid":"FYPO:0005801"}


id: PBO:0048985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled bile acid receptor 1","termid":"PBO:0048985"}


id: GO:0044676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three polypeptides which also contains molybdenum, a molybdopterin guanine dinucleotide and iron-sulfur clusters. This protein complex catalyzes the reversible conversion of CO2 and methanofuran to formylmethanofuran during methanogenesis.","definition_xrefs":["PMID:8954165","GOC:mengo_curators","PMID:1915887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"formyl-methanofuran dehydrogenase (molybdenum enzyme) complex","termid":"GO:0044676"}


id: PBO:0056869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICAL like 2","termid":"PBO:0056869"}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006486"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: GO:0048241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of epinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"catecholamine transport","termid":"GO:0051937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"epinephrine transport","synonyms":[{"name":"adrenaline transport","type":"exact"}],"termid":"GO:0048241"}


id: FYPO:0002243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of acid phosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal acid phosphatase activity","termid":"FYPO:0001044"},{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased acid phosphatase activity","termid":"FYPO:0002243"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: PBO:0069387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 647, pseudogene","termid":"PBO:0069387"}


id: PBO:0038423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A2M antisense RNA 1","termid":"PBO:0038423"}


id: FYPO:0006394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the meiotic spindle is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic spindle localization","synonyms":[{"name":"abnormal establishment of meiotic spindle localization","type":"exact"},{"name":"abnormal meiotic spindle localisation","type":"exact"},{"name":"abnormal spindle localization during meiosis","type":"exact"},{"name":"abnormal spindle localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006394"}


id: PBO:0055756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA periodontal mesenchymal stem cell osteogenesis related","termid":"PBO:0055756"}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: PBO:0076169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1B member 1","termid":"PBO:0076169"}


id: PR:Q9UUK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An OTU domain-containing protein 6B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin thioesterase otu2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.03","secondary_identifiers":["UniProtKB:Q9UUK3"],"synonyms":[{"name":"OTU domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC1952.03","type":"related"},{"name":"Spom972h-OTUD6B","type":"exact"}],"termid":"PR:Q9UUK3"}


id: FYPO:0006324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of the septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal septin ring morphology","synonyms":[{"name":"normal medial cortex septin ring morphology","type":"exact"},{"name":"normal septin ring morphology during mitotic cell cycle","type":"related"},{"name":"normal septin ring morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0006324"}


id: PBO:0066919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 221","termid":"PBO:0066919"}


id: PBO:0054850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2264","termid":"PBO:0054850"}


id: GO:0008792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H+ = agmatine + CO2.","definition_xrefs":["EC:4.1.1.19","RHEA:17641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arginine decarboxylase activity","secondary_identifiers":["MetaCyc:ARGDECARBOX-RXN","Reactome:R-HSA-350598","KEGG_REACTION:R00566"],"synonyms":[{"name":"L-arginine carboxy-lyase (agmatine-forming)","type":"related"},{"name":"L-arginine carboxy-lyase activity","type":"related"},{"name":"SpeA","type":"related"}],"termid":"GO:0008792"}


id: PBO:0091407
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly at damage sites is facilitated by Swi5 independently of Rad57","termid":"PBO:0091407"}


id: PBO:0053691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 886","termid":"PBO:0053691"}


id: PBO:0029643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_osmolarity","termid":"PBO:0029643"}


id: PBO:0029160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical","termid":"PBO:0029160"}


id: PBO:0111528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 8","termid":"PBO:0111528"}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: GO:0052927
data:
  {"annotated_genes":["SJAG_02288","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74007,83881],"is_not":false,"summary":null,"term":"GO:0052927"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + CTP = a tRNA with a 3' CC end + 2 diphosphate.","definition_xrefs":["RHEA:60008","PMID:31936900","PMID:33095240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"CTP:tRNA cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0052928"],"synonyms":[{"name":"CTP:3'-cytidine-tRNA cytidylyltransferase activity","type":"related"}],"termid":"GO:0052927","terms_by_termid":{"GO:0052927":null}}


id: PR:O14209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C6B12.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.04c","secondary_identifiers":["UniProtKB:O14209"],"synonyms":[{"name":"Spom972h-ybdL","type":"exact"}],"termid":"PR:O14209"}


id: PBO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 6","termid":"PBO:0044655"}


id: PBO:0076545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAT antisense RNA 1","termid":"PBO:0076545"}


id: PBO:0047864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(p16.2)","termid":"PBO:0047864"}


id: PBO:0049620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 23","termid":"PBO:0049620"}


id: GO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transferase activity","synonyms":[{"name":"down regulation of transferase activity","type":"exact"},{"name":"down-regulation of transferase activity","type":"exact"},{"name":"downregulation of transferase activity","type":"exact"},{"name":"inhibition of transferase activity","type":"narrow"},{"name":"transferase inhibitor","type":"exact"}],"termid":"GO:0051348"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: PBO:0013083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 Sap14","termid":"PBO:0013083"}


id: PBO:0068513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 104, pseudogene","termid":"PBO:0068513"}


id: GO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0043946)","synonyms":[{"name":"activation of enzyme activity in other organism","type":"narrow"},{"name":"activation of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of catalytic activity in other organism during symbiotic interaction","type":"related"},{"name":"up regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"up-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"upregulation of enzyme activity in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0043946"}


id: PBO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_protein_transport_during_vegetative_growth","termid":"PBO:0035881"}


id: PBO:0090565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog","termid":"PBO:0090565"}


id: PBO:0055512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2946","termid":"PBO:0055512"}


id: GO:0102337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA(4-) + malonyl-CoA(5-) + H+ = 3-oxohexacosanoyl-CoA + carbon dioxide + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-cerotoyl-CoA synthase activity (obsolete GO:0102337)","termid":"GO:0102337"}


id: GO:1900555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"depsipeptide metabolic process","termid":"GO:0050761"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"emericellamide metabolic process","synonyms":[{"name":"emericellamide metabolism","type":"exact"}],"termid":"GO:1900555"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: PBO:0050910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1 pseudogene 1","termid":"PBO:0050910"}


id: PBO:0063500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase catalytic subunit 1","termid":"PBO:0063500"}


id: PBO:0076591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 12","termid":"PBO:0076591"}


id: PBO:0069473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 740, pseudogene","termid":"PBO:0069473"}


id: PBO:0053624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 667","termid":"PBO:0053624"}


id: PBO:0058786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7155","termid":"PBO:0058786"}


id: PBO:0064481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta pseudogene 1","termid":"PBO:0064481"}


id: PBO:0045586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 8","termid":"PBO:0045586"}


id: GO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endocardial cushion cell over time, from its formation to the mature state.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell development","termid":"GO:0061444"}


id: PBO:0046693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETNK1 divergent transcript","termid":"PBO:0046693"}


id: GO:0090184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:yaf","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"positively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney development","synonyms":[{"name":"positive regulation of nephrogenesis","type":"related"}],"termid":"GO:0090184"}


id: GO:0010005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of microtubules underlying and connected to the plasma membrane, in the cortical cytosol, oriented mainly with their axes transverse to the long axis of the cell (and root in plants). In plants it influences the direction of cellulose microfibril deposition.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005938","GO:0005737"],"is_obsolete":false,"name":"cortical microtubule, transverse to long axis","termid":"GO:0010005"}


id: GO:0033149
data:
  {"annotated_genes":["SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70971],"is_not":false,"summary":null,"term":"GO:0033149"}]},"cv_name":"molecular_function","definition":"Binding to a FFAT motif, a short motif containing diphenylalanine in an acidic tract that targets proteins to the cytosolic surface of the ER and to the nuclear membrane by binding directly to members of the VAP (VAMP-associated protein) protein family.","definition_xrefs":["PMID:16004875","PMID:12727870","PMID:15455074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"FFAT motif binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0033149","terms_by_termid":{"GO:0033149":null}}


id: GO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in host (obsolete GO:0044000)","synonyms":[{"name":"movement in host environment","type":"related"},{"name":"movement of symbiont in host","type":"exact"},{"name":"movement of symbiont within host","type":"exact"},{"name":"movement within host","type":"exact"},{"name":"symbiont movement in host","type":"exact"},{"name":"symbiont movement within host","type":"related"}],"termid":"GO:0044000"}


id: PBO:0031658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth_during_cellular_hyperosmotic_response","termid":"PBO:0031658"}


id: GO:0140777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex, thus preventing an interaction with a factor that would promote dissociation of the complex.","definition_xrefs":["PMID:34040253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}


id: PATO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A moderate yellow-orange to orange color.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow orange","termid":"PATO:0001944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre","termid":"PATO:0001945"}


id: FYPO:0007416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere maintenance, i.e. any process that contributes to the maintenance of proper telomeric length and structure, is abnormal during G0 phase.","definition_xrefs":["PomBase:mah","GO:0000723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000293"],"is_obsolete":false,"name":"abnormal telomere maintenance during G0","synonyms":[{"name":"abnormal telomere maintenance during cell quiescence","type":"exact"},{"name":"abnormal telomere maintenance during quiescence","type":"exact"}],"termid":"FYPO:0007416"}


id: PBO:0078782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 7-1","termid":"PBO:0078782"}


id: PBO:0063713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 2","termid":"PBO:0063713"}


id: PBO:0053985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1301","termid":"PBO:0053985"}


id: PBO:0034291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_expresses","termid":"PBO:0034291"}


id: GO:0008571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. This is a highly diverse group of enzymes that perform many functions that are similar to those of chaperonins. They comprise a number of heat-shock-cognate proteins. They are also active in clathrin uncoating and in the oligomerization of actin.","definition_xrefs":["EC:3.6.4.10"],"gene_count":0,"genotype_count":0,"name":"obsolete non-chaperonin molecular chaperone ATPase activity (obsolete GO:0008571)","synonyms":[{"name":"non-chaperonin molecular chaperone ATPase activity","type":"exact"}],"termid":"GO:0008571"}


id: PBO:0005726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase Imt2","termid":"PBO:0005726"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_05349","SJAG_00474","SJAG_00249","SJAG_00147","SJAG_00206","SJAG_05025","SJAG_01214","SJAG_01008","SJAG_02455","SJAG_03430","SJAG_00076","SJAG_00602","SJAG_01810","SJAG_01654","SJAG_01315","SJAG_02722","SJAG_03469","SJAG_03966","SJAG_03995","SJAG_01870","SJAG_00911","SJAG_00363","SJAG_00504","SJAG_02078","SJAG_01301","SJAG_03983","SJAG_02304","SJAG_00859","SJAG_00498","SJAG_02185","SJAG_01452","SJAG_02227","SJAG_03427","SJAG_02560","SJAG_00058","SJAG_04898","SJAG_04318","SJAG_02558","SJAG_04117","SJAG_03547","SJAG_00597","SJAG_00094","SJAG_03210","SJAG_04214","SJAG_00809","SJAG_01504","SJAG_00225","SJAG_03301","SJAG_03112","SJAG_01152","SJAG_04783","SJAG_02279","SJAG_05240","SJAG_00414","SJAG_00322","SJAG_16453","SJAG_04911","SJAG_02844","SJAG_03993","SJAG_05009","SJAG_04163","SJAG_00577"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83920,84658,86079,91902,92270,93779,96786,98738,99111,99116,99289,100572,100602,100932,101720,103247,107358,109939,111050,114016,114928],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[106731,101937,97339,93935,114751,99299,87662,109348,91274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[91497,96785,113276,92941,101848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[92942,104841,102620,102474,113277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[85122,86307,104943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[110427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[101707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[84657,102836,108731,102475,101594,104842,106130,106734,101947,91029,87666,112474,109928,91708,108443,92435,109352,106705,91441,111311,93939,97836,105581,114755,89143,103018,99303,91283,106723,89471,97342,98640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["GOC:krc","GOC:mah","PMID:11343900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01315":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: GO:0090023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"positively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil chemotaxis","termid":"GO:0090023"}


id: MOD:01711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01711"}


id: GO:0070046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 3 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3 complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070046"}


id: PBO:0065082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primase and DNA directed polymerase","termid":"PBO:0065082"}


id: PBO:0065184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich 2","termid":"PBO:0065184"}


id: PATO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on right side of a another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right side of","termid":"PATO:0001793"}


id: GO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular component that forms a specialized region of connection between two or more cells, or between a cell and the extracellular matrix, or between two membrane-bound components of a cell, such as flagella.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:mah","ISBN:0198506732","PMID:28096264","PMID:26820516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell junction","secondary_identifiers":["Wikipedia:Cell_junction"],"termid":"GO:0030054"}


id: FYPO:0004769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular asparagine level","termid":"FYPO:0006953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar asparagine level","synonyms":[{"name":"increased level of asparagine in vacuole","type":"exact"},{"name":"increased vacuolar L-asparagine level","type":"exact"},{"name":"increased vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004769"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: GO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl ester = 11-cis-retinol + fatty acid.","definition_xrefs":["RHEA:31771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","secondary_identifiers":["MetaCyc:RXN-12550","EC:3.1.1.64","KEGG_REACTION:R08388"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl ester acylhydrolase, 11-cis retinol forming activity","type":"related"},{"name":"all-trans-retinylester 11-cis isomerohydrolase activity","type":"related"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052885"}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: PR:O74466
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1739.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1739.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.04c","synonyms":[{"name":"Spom972h-SPCC1739.04c","type":"exact"}],"termid":"PR:O74466"}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: FYPO:0000365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"small nucleus","synonyms":[{"name":"size of nucleus: decreased","type":"related"},{"name":"small nuclei","type":"exact"},{"name":"small nucleus during mitotic cell cycle","type":"related"},{"name":"small nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000365"}


id: GO:0023019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression as a consequence of a process in which a signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in regulation of gene expression","synonyms":[{"name":"regulation of gene expression as a consequence of signal transmission","type":"related"}],"termid":"GO:0023019"}


id: PBO:0112873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA regulator of IL2RA","termid":"PBO:0112873"}


id: GO:0019762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside catabolic process","termid":"GO:0016145"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"glucosinolate catabolic process","secondary_identifiers":["MetaCyc:PWY-5267"],"synonyms":[{"name":"glucosinolate breakdown","type":"exact"},{"name":"glucosinolate catabolism","type":"exact"},{"name":"glucosinolate degradation","type":"exact"}],"termid":"GO:0019762"}


id: GO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["PMID:5002049","GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"activation of aggregate size","type":"narrow"},{"name":"stimulation of aggregate size","type":"narrow"},{"name":"up regulation of aggregate size","type":"exact"},{"name":"up-regulation of aggregate size","type":"exact"},{"name":"upregulation of aggregate size","type":"exact"}],"termid":"GO:0031159"}


id: PBO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae PMP3","termid":"PBO:0016995"}


id: PBO:0061700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0061700"}


id: GO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A blood microparticle that is derived from, and contains membrane receptors as well as other proteins characteristic of, an endothelial cell.","definition_xrefs":["PMID:16373184","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle","termid":"GO:0072562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"endothelial microparticle","termid":"GO:0072563"}


id: PBO:0060552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma associated transcript 1","termid":"PBO:0060552"}


id: PBO:0045620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 32 (pseudogene)","termid":"PBO:0045620"}


id: PBO:0076035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32C","termid":"PBO:0076035"}


id: PBO:0113176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin adaptor required for nuclear translocation of the proteasome; mediates interaction between nuclear import factor Srp1p and the proteasome; nuclear import of the 26S proteasome is coupled to RanGTP-initiated, ubiquitin-independent proteasomal degradation of Sts1p; Sts1p and Srp1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation; role in ubiquitin-mediated protein degradation; contains a bipartite nuclear localization sequence","termid":"PBO:0113176"}


id: PBO:0028571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleotide-excision_repair_during_vegetative_growth","termid":"PBO:0028571"}


id: PBO:0077969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (AGC) 21-1","termid":"PBO:0077969"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: PBO:0054959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2373","termid":"PBO:0054959"}


id: GO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + NADPH + H+ + O2 = catechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenol 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENOL-2-MONOOXYGENASE-RXN","RHEA:17061","UM-BBD_enzymeID:e0208"],"synonyms":[{"name":"phenol hydroxylase activity","type":"related"},{"name":"phenol o-hydroxylase activity","type":"related"},{"name":"phenol,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018662"}


id: GO:0003300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy","termid":"GO:0003300"}


id: PR:Q9UTK7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTK7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.02c","synonyms":[{"name":"Spom972h-dsc2","type":"exact"},{"name":"UBA domain-containing protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"defective for SREBP cleavage protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK7"}


id: PBO:0029122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased","termid":"PBO:0029122"}


id: FYPO:0002997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to MMS","type":"exact"},{"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002997"}


id: PBO:0079373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 8","termid":"PBO:0079373"}


id: GO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphorylated threonine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"phosphothreonine residue binding","synonyms":[{"name":"phosphothreonine binding","type":"related"}],"termid":"GO:0050816"}


id: PBO:0069512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 781, pseudogene","termid":"PBO:0069512"}


id: GO:1905275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a Rohon-Beard neuron.","definition_xrefs":["GOC:TermGenie","ZFIN:ZDB-PUB-120807-45","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Rohon-Beard neuron differentiation","termid":"GO:1905275"}


id: GO:0050552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4S)-limonene + diphosphate.","definition_xrefs":["EC:4.2.3.16","MetaCyc:4.2.3.16-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(4S)-limonene synthase activity","secondary_identifiers":["RHEA:12869"],"synonyms":[{"name":"(-)-(4S)-limonene synthase activity","type":"exact"},{"name":"4S-(-)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (-)-(4S)-limonene-forming]","type":"related"},{"name":"geranyldiphosphate diphosphate lyase (limonene forming)","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [cyclizing, (4S)-limonene-forming]","type":"related"}],"termid":"GO:0050552"}


id: PBO:0046714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eva-1 homolog C","termid":"PBO:0046714"}


id: PBO:0086497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative pimeloyl-CoA synthetase involved in biotin biosynthesis; in S. cerevisiae strains YJM627 and A364a; highly degraded pseudogenic copy of BIO1/YAR070W-A, which is a paralog of YJR154W","termid":"PBO:0086497"}


id: PATO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000095 absolute drug sensitivity (obsolete PATO:0000095)","termid":"PATO:0000095"}


id: PBO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressed by thiamine","termid":"PBO:0003192"}


id: PBO:0110473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF6 pseudogene 1","termid":"PBO:0110473"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: PBO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 2","termid":"PBO:0046829"}


id: GO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein beta subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein beta subunit (obsolete GO:0075094)","termid":"GO:0075094"}


id: FYPO:0003175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is decreased during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleotide-excision repair during vegetative growth","termid":"FYPO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"decreased NER during cellular response to UV","type":"exact"},{"name":"decreased excision repair during cellular response to UV","type":"broad"},{"name":"decreased nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"reduced nucleotide-excision repair during cellular response to UV","type":"exact"}],"termid":"FYPO:0003175"}


id: PBO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 30","termid":"PBO:0080060"}


id: PBO:0065296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 3","termid":"PBO:0065296"}


id: PBO:0003748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA guanylyltransferase Ceg1","termid":"PBO:0003748"}


id: GO:0043032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stimulates, induces or increases the rate of macrophage activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"positively_regulates","term_name":"macrophage activation","termid":"GO:0042116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage activation","synonyms":[{"name":"activation of macrophage activation","type":"narrow"},{"name":"positive regulation of macrophage polarization","type":"exact"},{"name":"stimulation of macrophage activation","type":"narrow"},{"name":"up regulation of macrophage activation","type":"exact"},{"name":"up-regulation of macrophage activation","type":"exact"},{"name":"upregulation of macrophage activation","type":"exact"}],"termid":"GO:0043032"}


id: FYPO:0004498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"normal positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004498"}


id: FYPO:0001502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is higher than normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose level during vegetative growth","termid":"FYPO:0001444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular trehalose level during cellular response to osmotic stress","synonyms":[{"name":"increased cellular trehalose level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose level during vegetative growth and during cellular response to osmotic stress","type":"exact"},{"name":"increased cellular trehalose level in response to osmotic stress","type":"exact"},{"name":"increased trehalose accumulation during cellular response to osmotic stress","type":"related"}],"termid":"FYPO:0001502"}


id: PBO:0070204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 129 pseudogene","termid":"PBO:0070204"}


id: PBO:0050305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 7","termid":"PBO:0050305"}


id: PBO:0002581
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Processosome Mitochondrial","termid":"PBO:0002581"}


id: PBO:0029881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methylated_histone_residue_binding","termid":"PBO:0029881"}


id: PBO:0014247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0014247"}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: PBO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18","termid":"PBO:0075248"}


id: PR:O14232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superkiller viralicidic activity 2-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00545","PANTHER:PTHR11752:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase mtr4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.16c","secondary_identifiers":["UniProtKB:O14232"],"synonyms":[{"name":"Spom972h-SKIV2L2","type":"exact"}],"termid":"PR:O14232"}


id: GO:0016763
data:
  {"annotated_genes":["SJAG_03708","SJAG_00827","SJAG_04747","SJAG_04354","SJAG_01859","SJAG_06284","SJAG_04713","SJAG_06634","SJAG_03775","SJAG_00694","SJAG_01661","SJAG_03167","SJAG_01359","SJAG_03881","SJAG_05228","SJAG_04709","SJAG_00683","SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89643,89865,103461],"is_not":false,"summary":null,"term":"GO:0016763"},{"annotations":[89641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003999"},{"annotations":[93912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004044"},{"annotations":[100478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004048"},{"annotations":[90856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003879"},{"annotations":[89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052657"},{"annotations":[89864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004422"},{"annotations":[106490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000107"},{"annotations":[112173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050144"},{"annotations":[107992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004588"},{"annotations":[87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004731"},{"annotations":[85905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"},{"annotations":[93133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043399"},{"annotations":[85808,91900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008479"},{"annotations":[84593,88073,83606,110985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004845"},{"annotations":[89866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000310"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_00694":null,"SJAG_00827":null,"SJAG_01359":null,"SJAG_01661":null,"SJAG_01859":null,"SJAG_01974":null,"SJAG_03167":null,"SJAG_03708":null,"SJAG_03775":null,"SJAG_03881":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04747":null,"SJAG_05228":null,"SJAG_06284":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pentosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.4.2.-","Reactome:R-HSA-112265","Reactome:R-HSA-112266"],"synonyms":[{"name":"transferase activity, transferring pentosyl groups","type":"exact"}],"termid":"GO:0016763","terms_by_termid":{"GO:0000107":null,"GO:0000310":null,"GO:0003879":null,"GO:0003999":null,"GO:0004044":null,"GO:0004048":null,"GO:0004422":null,"GO:0004588":null,"GO:0004731":null,"GO:0004845":null,"GO:0008479":null,"GO:0016763":null,"GO:0017061":null,"GO:0043399":null,"GO:0050144":null,"GO:0052657":null}}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: GO:0071679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commissural neuron axon guidance","synonyms":[{"name":"commissural neuron axon pathfinding","type":"exact"}],"termid":"GO:0071679"}


id: GO:0072078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a nephron tubule are generated and organized. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubule morphogenesis","termid":"GO:0061333"},{"relation_name":"is_a","term_name":"nephron epithelium morphogenesis","termid":"GO:0072088"},{"relation_name":"part_of","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule morphogenesis","termid":"GO:0072078"}


id: PBO:0030905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_vegetative_growth","termid":"PBO:0030905"}


id: PBO:0073560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHC adaptor protein 3","termid":"PBO:0073560"}


id: PBO:0004807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetohydroxyacid reductoisomerase (predicted)","termid":"PBO:0004807"}


id: PBO:0065997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene B","termid":"PBO:0065997"}


id: GO:0097614
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a dinoflagellate cell below the cingulum; also referred to as the posterior portion of a dinoflagellate cell. It is separated from the epicone by the cingulum.","definition_xrefs":["Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate hypocone","synonyms":[{"name":"hypocone","type":"broad"},{"name":"hyposome","type":"related"},{"name":"hypotheca","type":"related"}],"termid":"GO:0097614"}


id: PR:O42888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aldo-keto reductase family 1 member E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C8E4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.04","secondary_identifiers":["UniProtKB:O42888"],"synonyms":[{"name":"Spom972h-Akr1e1","type":"exact"}],"termid":"PR:O42888"}


id: PBO:0083481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism","termid":"PBO:0083481"}


id: PBO:0049779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 13 pseudogene","termid":"PBO:0049779"}


id: PBO:0069065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 312, pseudogene","termid":"PBO:0069065"}


id: GO:1905437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K4 trimethylation.","definition_xrefs":["PMID:27541139","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 trimethylation (obsolete GO:1905437)","synonyms":[{"name":"activation of histone H3-K4 trimethylation","type":"narrow"},{"name":"up regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"up-regulation of histone H3-K4 trimethylation","type":"exact"},{"name":"upregulation of histone H3-K4 trimethylation","type":"exact"}],"termid":"GO:1905437"}


id: GO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"(1->6)-beta-D-glucan biosynthetic process","termid":"GO:0006078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of (1->6)-beta-D-glucan biosynthetic process","synonyms":[{"name":"regulation of 1,6-beta-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060917"}


id: PBO:0088368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0088368"}


id: GO:0098936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic membrane (obsolete GO:0098936)","synonyms":[{"name":"intrinsic to postsynaptic membrane","type":"narrow"}],"termid":"GO:0098936"}


id: PBO:0027825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meroterically_attached_lagging_mitotic_chromosomes","termid":"PBO:0027825"}


id: GO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ether","termid":"GO:0071362"}


id: SO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus","termid":"SO:0000993"}


id: PBO:0011953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-component_or_sequence","termid":"PBO:0011953"}


id: PBO:0059805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 31","termid":"PBO:0059805"}


id: PBO:0053633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 680","termid":"PBO:0053633"}


id: GO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein secretion","synonyms":[{"name":"down regulation of protein secretion","type":"exact"},{"name":"down-regulation of protein secretion","type":"exact"},{"name":"downregulation of protein secretion","type":"exact"},{"name":"inhibition of protein secretion","type":"narrow"}],"termid":"GO:0050709"}


id: FYPO:0007581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling occurs to a lower extent than normal during anaphase B of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased septation initiation network signaling during anaphase B","synonyms":[{"name":"decreased SIN signaling during anaphase B","type":"exact"},{"name":"decreased septation initiation network signaling during mitotic anaphase B","type":"exact"},{"name":"decreased septation initiation network signalling during anaphase B","type":"exact"},{"name":"decreased septation initiation signaling during anaphase B","type":"exact"},{"name":"reduced septation initiation network signaling during anaphase B","type":"exact"}],"termid":"FYPO:0007581"}


id: FYPO:0004704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"interphase microtubules present in increased numbers","synonyms":[{"name":"cytoplasmic microtubules present in greater numbers","type":"exact"},{"name":"cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"increased level of interphase MTs","type":"exact"},{"name":"interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"interphase microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004704"}


id: PBO:0090984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3","termid":"PBO:0090984"}


id: PBO:0028375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxanine_DNA_N-glycosylase_activity","termid":"PBO:0028375"}


id: GO:0090658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A biochemically and structurally distinct domain of the retinal interphotoreceptor matrix that is specifically associated with cone photoreceptor cell inner and outer segments.","definition_xrefs":["GOC:mr","PMID:2055688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"interphotoreceptor matrix","termid":"GO:0033165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone matrix sheath","termid":"GO:0090658"}


id: PBO:0074047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A28 divergent transcript","termid":"PBO:0074047"}


id: PBO:0068255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 2","termid":"PBO:0068255"}


id: GO:0098787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA cleavage involved in mRNA processing (obsolete GO:0098787)","termid":"GO:0098787"}


id: PBO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate dehydrogenase","termid":"PBO:0061830"}


id: PR:Q10490
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.13c","secondary_identifiers":["UniProtKB:Q10490"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10490"}


id: PBO:0109432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: PBO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antiparallel microtubule cross-linking factor Ase1","termid":"PBO:0001220"}


id: FYPO:0004384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of single-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"normal single-stranded DNA binding","synonyms":[{"name":"normal ssDNA binding","type":"exact"}],"termid":"FYPO:0004384"}


id: GO:0043134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["UBERON:0001046","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hindgut contraction","termid":"GO:0043134"}


id: GO:0014722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing the calcium ion signals that trigger contraction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"},{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by calcium ion signaling","synonyms":[{"name":"regulation of skeletal muscle contraction by calcium ion signalling","type":"exact"}],"termid":"GO:0014722"}


id: PBO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation","termid":"PBO:0030966"}


id: GO:0019332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.","definition_xrefs":["MetaCyc:P282-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using nitrite as electron donor","synonyms":[{"name":"nitrite oxidation","type":"broad"}],"termid":"GO:0019332"}


id: PBO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 2","termid":"PBO:0045317"}


id: GO:0062194
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93379],"is_not":false,"summary":null,"term":"GO:0062194"}]},"cv_name":"cellular_component","definition":"A microtubule minus end that is part of a cytoplasmic microtubule.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule minus-end","termid":"GO:0036449"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"cytoplasmic microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062194","terms_by_termid":{"GO:0062194":null}}


id: PBO:0053096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3D","termid":"PBO:0053096"}


id: GO:1901823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of delta-carotene.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-5946","PMID:8837512","UniPathway:UPA00801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"delta-carotene metabolic process","termid":"GO:1901822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"delta-carotene catabolic process","synonyms":[{"name":"delta-carotene breakdown","type":"exact"},{"name":"delta-carotene catabolism","type":"exact"},{"name":"delta-carotene degradation","type":"exact"}],"termid":"GO:1901823"}


id: PR:O74314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.09c gene.","definition_xrefs":["UniProtKB:O74314","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.09c","synonyms":[{"name":"O-succinylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC15D4.09c","type":"exact"}],"termid":"PR:O74314"}


id: PBO:0049884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 3","termid":"PBO:0049884"}


id: PBO:0060016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 4","termid":"PBO:0060016"}


id: PBO:0049852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 1","termid":"PBO:0049852"}


id: PBO:0084874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; MRP1 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator, and with PET123, encoding a small subunit mitochondrial ribosomal protein","termid":"PBO:0084874"}


id: PBO:0062754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily M member 1","termid":"PBO:0062754"}


id: GO:0051417
data:
  {"annotated_genes":["SJAG_03540","SJAG_07018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97084,114703],"is_not":false,"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the spindle pole body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule nucleation by spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPB-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by SPB","type":"exact"},{"name":"spindle pole body-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051417","terms_by_termid":{"GO:0051417":null}}


id: PBO:0070582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 48","termid":"PBO:0070582"}


id: GO:0070429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070425"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"negative regulation of NOD1 signaling pathway","type":"exact"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070429"}


id: FYPO:0008186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere central core is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008186"}


id: PR:Q9UTE8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTE8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin-remodeling complex subunit ies6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.04c","synonyms":[{"name":"Spom972h-ies6","type":"exact"}],"termid":"PR:Q9UTE8"}


id: PBO:0049322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 1","termid":"PBO:0049322"}


id: PBO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial ring protein Mid2","termid":"PBO:0002667"}


id: PBO:0068143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 450","termid":"PBO:0068143"}


id: GO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + arsenite + H2O = AH(2) + arsenate + 2 H+.","definition_xrefs":["RHEA:18449","EC:1.20.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase (donor) activity","secondary_identifiers":["MetaCyc:1.20.99.1-RXN","KEGG_REACTION:R05752"],"synonyms":[{"name":"arsenate:(acceptor) oxidoreductase activity","type":"related"},{"name":"arsenate:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0050612"}


id: GO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: branched-chain dodecylbenzene sulfonate + 1/2 O2 + H+ = sulfurous acid + branched-chain dodecyl-4-hydroxy-benzene + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1079"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain dodecylbenzene sulfonate monooxygenase activity (obsolete GO:0034802)","termid":"GO:0034802"}


id: SO:1000119
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000119 sequence_variant_causing_inactive_ligand_binding_site (obsolete SO:1000119)","synonyms":[{"name":"mutation causing inactive ligand binding site","type":"related"},{"name":"sequence variant causing inactive ligand binding site","type":"exact"}],"termid":"SO:1000119"}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: GO:0033032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid cell apoptotic process","synonyms":[{"name":"regulation of myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033032"}


id: PBO:0086856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; involved in regulation of early and middle sporulation genes; forms amyloid-like aggregates under starvation that are active in translational repression","termid":"PBO:0086856"}


id: PBO:0074733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 91","termid":"PBO:0074733"}


id: PBO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 42, pseudogene","termid":"PBO:0052802"}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: GO:0098565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"lumenal side of endosome membrane","synonyms":[{"name":"internal leaflet of endosome membrane","type":"exact"},{"name":"internal side of endosome membrane","type":"exact"}],"termid":"GO:0098565"}


id: PBO:0072036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 6","termid":"PBO:0072036"}


id: PBO:0047705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 1","termid":"PBO:0047705"}


id: GO:0036110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of inositol.","definition_xrefs":["PMID:19606215","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to inositol starvation","termid":"GO:0036110"}


id: GO:0003951
data:
  {"annotated_genes":["SJAG_01582","SJAG_03946","SJAG_01566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88021,92561,93577],"is_not":false,"summary":null,"term":"GO:0003951"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NAD+ = ADP + 2 H+ + NADP+.","definition_xrefs":["RHEA:18629","EC:2.7.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_01582":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"NAD+ kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00104","Reactome:R-HSA-8955030","MetaCyc:NAD-KIN-RXN","Reactome:R-HSA-197198"],"synonyms":[{"name":"ATP:NAD+ 2'-phosphotransferase activity","type":"related"},{"name":"DPN kinase activity","type":"related"},{"name":"NAD kinase activity","type":"exact"},{"name":"NADK","type":"related"},{"name":"nicotinamide adenine dinucleotide kinase (phosphorylating)","type":"related"},{"name":"nicotinamide adenine dinucleotide kinase activity","type":"related"}],"termid":"GO:0003951","terms_by_termid":{"GO:0003951":null}}


id: GO:0042969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transport (obsolete GO:0042969)","termid":"GO:0042969"}


id: PBO:0053690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 885","termid":"PBO:0053690"}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PBO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_form_id","termid":"PBO:0006268"}


id: GO:2000839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of androstenedione secretion","termid":"GO:2000837"},{"relation_name":"positively_regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of androstenedione secretion","synonyms":[{"name":"positive regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000839"}


id: FYPO:0002333
data:
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id: PBO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 6","termid":"PBO:0052638"}


id: GO:0036365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of transforming growth factor beta 2 (TGF-beta2) from its latent state.","definition_xrefs":["PMID:12482908","PMID:9170210","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta2 activation (obsolete GO:0036365)","synonyms":[{"name":"TGF-beta 2 activation","type":"exact"},{"name":"TGFB2 activation","type":"exact"},{"name":"TGFbeta 2 activation","type":"exact"}],"termid":"GO:0036365"}


id: GO:0140970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the AIM2 inflammasome complex.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"AIM2 inflammasome complex assembly","termid":"GO:0140970"}


id: PBO:0057159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302d","termid":"PBO:0057159"}


id: PR:O60163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-sensitive aspartokinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.04","secondary_identifiers":["UniProtKB:O60163"],"synonyms":[{"name":"Spom972h-lysC","type":"exact"},{"name":"aspartate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60163"}


id: GO:0160083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an activated T cell acquires specialized features of an exhausted T cell.","definition_xrefs":["PMID:31570879","PMID:21739672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exhausted T cell differentiation","synonyms":[{"name":"T cell dysfuction","type":"related"},{"name":"T cell exhaustion","type":"exact"}],"termid":"GO:0160083"}


id: PBO:0041272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 4","termid":"PBO:0041272"}


id: PBO:0064687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 23","termid":"PBO:0064687"}


id: PBO:0027930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027930"}


id: PBO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 89","termid":"PBO:0042777"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: PR:Q09670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.04 gene.","definition_xrefs":["UniProtKB:Q09670","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C5H10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.04","synonyms":[{"name":"Old yellow enzyme homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC5H10.04","type":"exact"}],"termid":"PR:Q09670"}


id: GO:0007245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAPKKK activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Saccharomyces) (obsolete GO:0007245)","synonyms":[{"name":"activation of MAPKKK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007245"}


id: GO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 28 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S28 phosphorylation (obsolete GO:0043988)","synonyms":[{"name":"histone H3 phosphorylation at S28","type":"exact"},{"name":"histone H3S28 phosphorylation","type":"exact"}],"termid":"GO:0043988"}


id: PBO:0029616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029616"}


id: PBO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds STREP motif","termid":"PBO:0000899"}


id: GO:0140103
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of a biochemical reaction at physiological temperatures in which one of the substrates is a glycoprotein.","definition_xrefs":["GOC:pdt","GOC:molecular_function_refactoring"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"catalytic activity, acting on a glycoprotein","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140103","terms_by_termid":{"GO:0047220":null}}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: PBO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk4/ sensor for unfolded proteins in the ER (predicted)","termid":"PBO:0001032"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 15 Y-linked","termid":"PBO:0061825"}


id: GO:0048819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle maturation","termid":"GO:0048819"}


id: PBO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-5","termid":"PBO:0052894"}


id: GO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent alteration of one or more amino acid residues within a histone protein that takes place during, and results in a modification pattern characteristic of, S phase of the cell cycle.","definition_xrefs":["GOC:mah","PMID:9990026"],"gene_count":0,"genotype_count":0,"name":"obsolete S phase-specific histone modification (obsolete GO:0006324)","synonyms":[{"name":"S phase-specific histone modification","type":"exact"},{"name":"S-phase-specific histone modification","type":"exact"}],"termid":"GO:0006324"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: PBO:0077018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS4 antisense RNA 1","termid":"PBO:0077018"}


id: PBO:0028406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_with_swollen_medial_region","termid":"PBO:0028406"}


id: GO:1903963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an arachidonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bhm","PMID:15642721","GOC:TermGenie","GO_REF:0000065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"arachidonate transport","synonyms":[{"name":"arachidonic acid transport","type":"exact"}],"termid":"GO:1903963"}


id: FYPO:0005815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the perinuclear region of the cytoplasm is abnormal during mitotic nuclear division.","definition_xrefs":["PomBase:mah","GO:1905719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to perinuclear region of cytoplasm during mitotic interphase","synonyms":[{"name":"abnormal protein localisation to perinuclear region of cytoplasm during mitotic interphase","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase during vegetative growth","type":"exact"},{"name":"abnormal protein localization to perinuclear region of cytoplasm during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localisation to nuclear region during mitotic interphase","type":"related"},{"name":"protein localization to nuclear region during mitotic interphase","type":"related"}],"termid":"FYPO:0005815"}


id: PBO:0043128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIBAR1 divergent transcript","termid":"PBO:0043128"}


id: PBO:0081701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF622 pseudogene 1","termid":"PBO:0081701"}


id: PBO:0029007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_long_introns","termid":"PBO:0029007"}


id: GO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15224093","PMID:16181335","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","termid":"GO:0042590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of exogenous peptide antigen via MHC class I","type":"exact"},{"name":"TAP-independent exogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I, TAP-independent","type":"exact"}],"termid":"GO:0002480"}


id: GO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic adenosine monophosphate + H2O = cyclic inosine monophosphate + NH3.","definition_xrefs":["PMID:24074367","RHEA:22908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"cAMP deaminase activity","secondary_identifiers":["EC:3.5.4.46"],"synonyms":[{"name":"cyclic adenosine monophosphate deaminase activity","type":"exact"}],"termid":"GO:0090612"}


id: MOD:00070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-methyl-L-alanine.","definition_xrefs":["RESID:AA0061","ChEBI:17519","PubMed:337304","PubMed:323502","PubMed:7007074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated alanine","termid":"MOD:01461"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-alanine","synonyms":[{"name":"(2S)-2-methylaminopropanoic acid","type":"exact"},{"name":"2-methylazanylpropanoic acid","type":"exact"},{"name":"MOD_RES N-methylalanine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-alanine","type":"exact"},{"name":"N-methylalanine","type":"exact"},{"name":"N-methylated L-alanine","type":"exact"},{"name":"NMe1Ala","type":"exact"}],"termid":"MOD:00070"}


id: PATO:0001920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the abdomen of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised ventrally","termid":"PATO:0001920"}


id: PBO:0065291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 1","termid":"PBO:0065291"}


id: PBO:0084359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucyl aminopeptidase yscIV with epoxide hydrolase activity; metalloenzyme containing one zinc atom; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; also known as leukotriene A4 hydrolase","termid":"PBO:0084359"}


id: PBO:0054089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1442","termid":"PBO:0054089"}


id: FYPO:0002280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division","synonyms":[{"name":"inviable following spore germination, single cell division","type":"exact"},{"name":"inviable germinated spore, single cell division","type":"exact"},{"name":"lethal after spore germination, single cell division","type":"exact"}],"termid":"FYPO:0002280"}


id: PBO:0059442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A13","termid":"PBO:0059442"}


id: PBO:0063385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD4 antisense RNA 1","termid":"PBO:0063385"}


id: PBO:0000248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase (predicted)","termid":"PBO:0000248"}


id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["PMID:20505341","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0082858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); hydrophilic homodimeric protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles","termid":"PBO:0082858"}


id: GO:0015897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organomercurial compound is transported across a membrane. Organomercurial substances are any organic compound containing a mercury atom.","definition_xrefs":["PMID:18793329","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercurial transport (obsolete GO:0015897)","termid":"GO:0015897"}


id: PBO:0082884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; forms a functional kinase complex with Pho85p cyclin-dependent kinase (Cdk), expressed in late M/early G1 phase, activated by Swi5p; PCL9 has a paralog, PCL2, that arose from the whole genome duplication","termid":"PBO:0082884"}


id: PBO:0000771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haemolysin-III family protein (predicted)","termid":"PBO:0000771"}


id: PBO:0029925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ionizing_radiation_during_vegetative_growth","termid":"PBO:0029925"}


id: PBO:0065956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 pseudogene 1","termid":"PBO:0065956"}


id: GO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine metabolic process","termid":"GO:0008617"},{"relation_name":"is_a","term_name":"guanosine-containing compound biosynthetic process","termid":"GO:1901070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine biosynthetic process","synonyms":[{"name":"guanosine anabolism","type":"exact"},{"name":"guanosine biosynthesis","type":"exact"},{"name":"guanosine formation","type":"exact"},{"name":"guanosine synthesis","type":"exact"}],"termid":"GO:0046114"}


id: MOD:01357
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-lysine residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-lysine.","definition_xrefs":["PubMed:12686488","PubMed:16335955","Unimod:510#K"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6-dimethyl-L-lysine","termid":"MOD:00084"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"2x(13)C,4x(2)H labeled dimethylated residue","termid":"MOD:00927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated L-lysine","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:01357"}


id: GO:0098814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The low level of synaptic transmission that occurs via spontaneous neurotransmitter release into the synaptic cleft in the absence of a presynaptic action potential.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"spontaneous synaptic transmission","synonyms":[{"name":"basal synaptic transmission","type":"exact"}],"termid":"GO:0098814"}


id: PBO:0082346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase; component of the mitochondrial degradosome along with the RNase Dss1p; the degradosome associates with the ribosome and mediates RNA turnover; also required during splicing of the COX1 AI5_beta intron; expression of a processed form of human homolog SUPV3L1 carrying an N-terminal deletion of 46 amino acids rescues yeast suv3 null mutant","termid":"PBO:0082346"}


id: PBO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1298, pseudogene","termid":"PBO:0070002"}


id: PBO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc1","termid":"PBO:0001729"}


id: FYPO:0000458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000458"}


id: PBO:0012055
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpb3 was previously considered to be SPAC17G8.03c but this new gene product appears to be the true ortholog of DPB3/POLE4 see Treefam:TF103009","termid":"PBO:0012055"}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: FYPO:0003865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal when the cell is in G0 phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during G0","synonyms":[{"name":"decreased protein accumulation during G0","type":"related"},{"name":"decreased protein level during cell quiescence","type":"exact"},{"name":"decreased protein level during quiescence","type":"exact"},{"name":"reduced protein level during G0","type":"exact"}],"termid":"FYPO:0003865"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: GO:0098806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An RNA interference pathway in which a miRNA binding to mRNA triggers shortening of the poly(A) tail of a nuclear-transcribed mRNA, resulting in destabilization of the mRNA and a reduction the amount of translated transcript.","definition_xrefs":["GOC:dos","PMID:21118121","GOC:BHF","PMID:23209154"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated gene silencing by mRNA deadenylation (obsolete GO:0098806)","synonyms":[{"name":"deadenylation involved in gene silencing by miRNA","type":"exact"},{"name":"mRNA deadenylation-mediated gene silencing by miRNA","type":"exact"}],"termid":"GO:0098806"}


id: PBO:0065620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase mitochondrial 1","termid":"PBO:0065620"}


id: PBO:0046725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 5","termid":"PBO:0046725"}


id: PBO:0084042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase of the endoplasmic reticulum (ER); negatively regulates COPII vesicle formation; prevents production of vesicles with defective subunits; required for proper discrimination between resident ER proteins and Golgi-bound cargo molecules; functional ortholog of human PGAP1, mutation of which is associated with intellectual disability and encephalopathy","termid":"PBO:0084042"}


id: PR:Q09798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PAB-dependent poly(A)-specific ribonuclease subunit PAN2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15728:SF0","PRO:DNx","OMA:SCHPO00288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit PAN2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.04","secondary_identifiers":["UniProtKB:Q09798"],"synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex catalytic subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAN2","type":"exact"}],"termid":"PR:Q09798"}


id: PBO:0079477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWSG1 divergent transcript","termid":"PBO:0079477"}


id: PBO:0028062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-encoded_protein_in_cell","termid":"PBO:0028062"}


id: PBO:0082848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding transcription factor; activates transcription of the metallothionein genes CUP1-1 and CUP1-2 in response to elevated copper concentrations; required for regulation of copper genes in response to DNA-damaging reagents; CUP2 has a paralog, HAA1, that arose from the whole genome duplication","termid":"PBO:0082848"}


id: PBO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential function does not appear to reside in its role in the folding or retention of misfolded proteins","termid":"PBO:0001331"}


id: PR:Q9USN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.06c","secondary_identifiers":["UniProtKB:Q9USN0"],"synonyms":[{"name":"GPI mannosyltransferase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGB","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USN0"}


id: PBO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body","termid":"PBO:0030023"}


id: PR:O60063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nam9 gene.","definition_xrefs":["UniProtKB:O60063","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S4-like, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.01c","synonyms":[{"name":"Spom972h-nam9","type":"exact"}],"termid":"PR:O60063"}


id: GO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"},{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"positively_regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"}


id: GO:1905403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["PMID:24187568","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"negatively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905403"}


id: PBO:0080192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox","termid":"PBO:0080192"}


id: PR:Q9P6J6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A periplasmic beta-glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.04","secondary_identifiers":["UniProtKB:Q9P6J6"],"synonyms":[{"name":"Cellobiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Gentiobiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bglX","type":"exact"},{"name":"beta-D-glucoside glucohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6J6"}


id: GO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of an ion channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of ion channel activity in another organism","synonyms":[{"name":"modulation of ion channel activity in other organism","type":"exact"},{"name":"regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044561"}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: PBO:0063560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelota mRNA surveillance and ribosome rescue factor","termid":"PBO:0063560"}


id: PBO:0085216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase for Vac8p; required for vacuolar membrane fusion; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; autoacylates; required for vacuolar integrity under stress conditions","termid":"PBO:0085216"}


id: PBO:0053103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 2","termid":"PBO:0053103"}


id: GO:0032904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotrophin production","termid":"GO:0032900"},{"relation_name":"is_a","term_name":"regulation of nerve growth factor production","termid":"GO:0032903"},{"relation_name":"negatively_regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nerve growth factor production","synonyms":[{"name":"down regulation of nerve growth factor production","type":"exact"},{"name":"down-regulation of nerve growth factor production","type":"exact"},{"name":"downregulation of nerve growth factor production","type":"exact"},{"name":"inhibition of nerve growth factor production","type":"narrow"},{"name":"negative regulation of NGF production","type":"exact"}],"termid":"GO:0032904"}


id: PBO:0057126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 210","termid":"PBO:0057126"}


id: GO:0035615
data:
  {"annotated_genes":["SJAG_02453","SJAG_00104","SJAG_00152","SJAG_02805","SJAG_00800","SJAG_00379","SJAG_04931","SJAG_00108","SJAG_04609","SJAG_01809","SJAG_03726","SJAG_01167","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85042,90295,92237,92376,95421,97230,104419,107576,107672,107734,108863,109089,114922],"is_not":false,"summary":null,"term":"GO:0035615"}]},"cv_name":"molecular_function","definition":"Bringing together a cargo protein with clathrin, responsible for the formation of endocytic vesicles.","definition_xrefs":["GOC:BHF","PMID:15728179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo adaptor activity","termid":"GO:0140312"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"clathrin adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"clathrin-associated adaptor activity","type":"exact"}],"termid":"GO:0035615","terms_by_termid":{"GO:0035615":null}}


id: GO:0071122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor A.","definition_xrefs":["PMID:17363377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-A complex","synonyms":[{"name":"ITGA9-ITGB1-VEGFA complex","type":"narrow"}],"termid":"GO:0071122"}


id: PBO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 3","termid":"PBO:0042476"}


id: PBO:0043502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP2 antisense RNA 1","termid":"PBO:0043502"}


id: GO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075164)","synonyms":[{"name":"negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075164"}


id: PBO:0075600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative)","termid":"PBO:0075600"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: PBO:0056624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 6","termid":"PBO:0056624"}


id: PBO:0085867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene","termid":"PBO:0085867"}


id: GO:0034105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue remodeling","synonyms":[{"name":"positive regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034105"}


id: PBO:0079567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing B","termid":"PBO:0079567"}


id: GO:0098964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in nerve cell dendrites towards the postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde dendritic transport","termid":"GO:0098937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde dendritic transport of messenger ribonucleoprotein complex","synonyms":[{"name":"anterograde dendritic transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0098964"}


id: PBO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO38 divergent transcript","termid":"PBO:0047400"}


id: GO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA.","definition_xrefs":["EC:5.1.99.1","RHEA:20553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylmalonyl-CoA epimerase activity","secondary_identifiers":["MetaCyc:METHYLMALONYL-COA-EPIM-RXN","Reactome:R-HSA-71020","KEGG_REACTION:R02765"],"synonyms":[{"name":"2-methyl-3-oxopropanoyl-CoA 2-epimerase activity","type":"related"},{"name":"DL-methylmalonyl-CoA racemase activity","type":"related"},{"name":"methylmalonyl coenzyme A racemase activity","type":"related"},{"name":"methylmalonyl-CoA 2-epimerase activity","type":"related"},{"name":"methylmalonyl-CoA racemase activity","type":"related"}],"termid":"GO:0004493"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: PBO:0074246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 2","termid":"PBO:0074246"}


id: GO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reproductive fruiting body development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reproductive fruiting body development","synonyms":[{"name":"regulation of fruiting body formation","type":"exact"}],"termid":"GO:0031155"}


id: PBO:0090713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX2 complex subunit Sac3","termid":"PBO:0090713"}


id: GO:0050302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + indole-3-acetaldehyde + O2 = (indol-3-yl)acetate + H+ + H2O2.","definition_xrefs":["RHEA:16277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl-aldehyde oxidase activity","termid":"GO:0018488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetaldehyde oxidase activity","secondary_identifiers":["KEGG_REACTION:R02681","MetaCyc:INDOLE-3-ACETALDEHYDE-OXIDASE-RXN","EC:1.2.3.7"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"AO1","type":"related"},{"name":"IAA oxidase activity","type":"related"},{"name":"IAAld oxidase activity","type":"related"},{"name":"indole-3-acetaldehyde:oxygen oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde oxidase activity","type":"related"}],"termid":"GO:0050302"}


id: GO:1905650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shell calcification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"positively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shell calcification","synonyms":[{"name":"activation of shell calcification","type":"narrow"},{"name":"up regulation of shell calcification","type":"exact"},{"name":"up-regulation of shell calcification","type":"exact"},{"name":"upregulation of shell calcification","type":"exact"}],"termid":"GO:1905650"}


id: PBO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 11","termid":"PBO:0072081"}


id: PBO:0068370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 152 pseudogene 1","termid":"PBO:0068370"}


id: GO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 2.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 2 signaling pathway","synonyms":[{"name":"TLR2 signaling pathway","type":"exact"},{"name":"toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034134"}


id: PBO:0055217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2643","termid":"PBO:0055217"}


id: GO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + mucus glycoprotein = CoA + O-palmitoylglycoprotein.","definition_xrefs":["MetaCyc:GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN","EC:2.3.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"glycoprotein O-fatty-acyltransferase activity","synonyms":[{"name":"fatty-acyl-CoA:mucus-glycoprotein fatty-acyltransferase activity","type":"related"},{"name":"protein acyltransferase activity","type":"related"}],"termid":"GO:0047965"}


id: PBO:0066859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 159","termid":"PBO:0066859"}


id: GO:0030190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a molecular chaperone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone inhibitor activity (obsolete GO:0030190)","synonyms":[{"name":"chaperone inhibitor activity","type":"exact"}],"termid":"GO:0030190"}


id: PBO:0003661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/EH/EF hand domain protein Ucp8","termid":"PBO:0003661"}


id: FYPO:0003108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere","termid":"FYPO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to telomere during vegetative growth","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"abnormal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003108"}


id: MOD:01847
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine sulfinyl phosphate.","definition_xrefs":["RESID:AA0557","PubMed:16565085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine sulfinyl phosphate","synonyms":[{"name":"(2R)-2-amino-3-[(phosphonooxy)sulfinyl]propanoic acid","type":"exact"},{"name":"L-cysteine sulfinyl phosphate","type":"exact"},{"name":"cysteine sulfinic phosphoryl ester","type":"exact"}],"termid":"MOD:01847"}


id: PBO:0113022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches and the cytokinetic contractile ring; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0113022"}


id: GO:0008967
data:
  {"annotated_genes":["SJAG_03108"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99723],"is_not":false,"summary":null,"term":"GO:0008967"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate.","definition_xrefs":["RHEA:14369","EC:3.1.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphoglycolate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GPH-RXN","KEGG_REACTION:R01334"],"synonyms":[{"name":"2-phosphoglycolate phosphatase activity","type":"related"},{"name":"2-phosphoglycolate phosphohydrolase activity","type":"related"},{"name":"P-glycolate phosphatase activity","type":"related"},{"name":"phosphoglycolate hydrolase activity","type":"related"},{"name":"phosphoglycollate phosphatase activity","type":"related"}],"termid":"GO:0008967","terms_by_termid":{"GO:0008967":null}}


id: PBO:0014258
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HIS1","termid":"PBO:0014258"}


id: PBO:0049643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 46","termid":"PBO:0049643"}


id: PR:P0C5Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ten1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0C5Y7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ten1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.14","synonyms":[{"name":"Spom972h-ten1","type":"exact"}],"termid":"PR:P0C5Y7"}


id: PR:Q9Y7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.01c","synonyms":[{"name":"Spom972h-psy2","type":"exact"}],"termid":"PR:Q9Y7J8"}


id: PBO:0045987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 1","termid":"PBO:0045987"}


id: PBO:0067304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 390, pseudogene","termid":"PBO:0067304"}


id: PBO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Lsp1","termid":"PBO:0005766"}


id: PBO:0070037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1334, pseudogene","termid":"PBO:0070037"}


id: PBO:0058429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4799","termid":"PBO:0058429"}


id: PBO:0042028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85C","termid":"PBO:0042028"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: PBO:0058420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4789","termid":"PBO:0058420"}


id: GO:0047385
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O-phospho-L-seryl-[3-methyl-2-oxobutanoate dehydrogenase] = L-seryl-[3-methyl-2-oxobutanoate dehydrogenase] + phosphate.","definition_xrefs":["EC:3.1.3.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004721","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"[3-methyl-2-oxobutanoate dehydrogenase (lipoamide)]-phosphatase activity","secondary_identifiers":["RHEA:77247","MetaCyc:3.1.3.52-RXN"],"synonyms":[{"name":"branched-chain 2-keto acid dehydrogenase phosphatase activity","type":"exact"},{"name":"branched-chain alpha-keto acid dehydrogenase phosphatase","type":"exact"},{"name":"branched-chain oxo-acid dehydrogenase phosphatase activity","type":"exact"}],"termid":"GO:0047385"}


id: FYPO:0005131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spores germinate to a lower extent than wild type following exposure to ethanol.","definition_xrefs":["PomBase:mah","PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spores sensitive to ethanol","termid":"FYPO:0005131"}


id: PBO:0070778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 8","termid":"PBO:0070778"}


id: PBO:0028825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_migration_during_mating","termid":"PBO:0028825"}


id: GO:0150104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-brain barrier.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:29377008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"transport across blood-brain barrier","synonyms":[{"name":"transport across BBB","type":"exact"},{"name":"transport across blood brain barrier","type":"exact"}],"termid":"GO:0150104"}


id: PBO:0039103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 7","termid":"PBO:0039103"}


id: PBO:0053185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 9","termid":"PBO:0053185"}


id: PBO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase involved in genome maintenance Pgp1","termid":"PBO:0005380"}


id: GO:1905228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GO_REF:0000058","PMID:15659068","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905228)","synonyms":[{"name":"activation of adhesion of symbiont to host epithelial cell","type":"narrow"},{"name":"up regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"up-regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"upregulation of adhesion of symbiont to host epithelial cell","type":"exact"}],"termid":"GO:1905228"}


id: PATO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a three dimensional cavity with a narrow or no opening, and often containing an anatomical substance.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccular","synonyms":[{"name":"sacular","type":"exact"}],"termid":"PATO:0001987"}


id: PBO:0089067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein, human IK ortholog, implicated in meiotic chromosome segregation in fission yeast, splicing or spindle checkpoint in human","termid":"PBO:0089067"}


id: PBO:0086021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss","termid":"PBO:0086021"}


id: PBO:0042678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein alpha","termid":"PBO:0042678"}


id: PBO:0071447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 53","termid":"PBO:0071447"}


id: PBO:0078921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 10-1","termid":"PBO:0078921"}


id: GO:0035101
data:
  {"annotated_genes":["SJAG_03128","SJAG_02416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107340,109675],"is_not":false,"summary":null,"term":"GO:0035101"}]},"cv_name":"cellular_component","definition":"A histone chaperone complex that facilitates nucleosome disassembly and reassembly upon DNA or RNA polymerase passage.","definition_xrefs":["PMID:34731638","PMID:12934007","PMID:12934006","PMID:16678108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"FACT complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Facilitates chromatin transcription complex","type":"exact"}],"termid":"GO:0035101","terms_by_termid":{"GO:0035101":null}}


id: PBO:0018282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Cmp7 (predicted)","termid":"PBO:0018282"}


id: PBO:0077421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 160","termid":"PBO:0077421"}


id: PBO:0091984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote-like Wtf21","termid":"PBO:0091984"}


id: GO:1903742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["PMID:25329901","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"}


id: PBO:0079138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 1","termid":"PBO:0079138"}


id: GO:0007529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process in which a synapse between a motor neuron and a muscle is initially formed.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"},{"relation_name":"part_of","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of synaptic specificity at neuromuscular junction","termid":"GO:0007529"}


id: GO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum secundum is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"septum secundum development","termid":"GO:0003285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum secundum morphogenesis","termid":"GO:0003290"}


id: GO:1990621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ESCRT complex that has AAA-ATPase activity and is involved in ESCRT-mediated intralumenal vesicle formation and the final stages of cytokinesis. The complex catalyzes disassembly of the ESCRT III filament around the neck of the budding vesicle in an ATP-driven reaction, resulting in membrane scission and recycling of the ESCRT III components back to the cytosol. In yeast, it is formed by the AAA ATPase Vps4 and its cofactor Vta1.","definition_xrefs":["PMID:21925211","GOC:bhm","PMID:24456136","PMID:26775243","GOC:ha","PMID:20653365","PMID:20696398","PMID:25164817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"ESCRT IV complex","synonyms":[{"name":"ESCRT-IV","type":"exact"},{"name":"VPS4A-VPS4B","type":"narrow"},{"name":"VPS4A/B complex","type":"narrow"},{"name":"Vps4 complex","type":"related"},{"name":"Vps4-Vta1 complex","type":"narrow"},{"name":"Vta1-Vps4 complex","type":"related"},{"name":"vacuolar protein sorting-associated complex","type":"related"}],"termid":"GO:1990621"}


id: PBO:0085999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Listeria monocytogenes major sigma factor (rpoD gene product); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085999"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["UniProtKB:Q9P784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: PBO:0050845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet cell autoantigen 1","termid":"PBO:0050845"}


id: GO:0071523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a TIR domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete TIR domain-mediated complex assembly (obsolete GO:0071523)","termid":"GO:0071523"}


id: GO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the semicircular canals are generated and organized.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal morphogenesis","synonyms":[{"name":"embryonic semicircular canal morphogenesis","type":"exact"}],"termid":"GO:0048752"}


id: PBO:0068424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1","termid":"PBO:0068424"}


id: PBO:0053246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX1 divergent transcript","termid":"PBO:0053246"}


id: GO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell wall that is no longer able to expand and so does not permit growth. Secondary cell walls contain less pectin that primary cell walls. The secondary cell is mostly composed of cellulose and is strengthened with lignin.","definition_xrefs":["ISBN:0943088399","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"secondary cell wall","secondary_identifiers":["Wikipedia:Secondary_cell_wall"],"termid":"GO:0009531"}


id: PBO:0028418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_nitrosative_stress","termid":"PBO:0028418"}


id: PBO:0029879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029879"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: PBO:0088758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25","termid":"PBO:0088758"}


id: PBO:0084841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: PBO:0052069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 8","termid":"PBO:0052069"}


id: PBO:0068740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 3, pseudogene","termid":"PBO:0068740"}


id: PBO:0026872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0026872"}


id: MOD:01337
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartate 4-methyl ester.","definition_xrefs":["Unimod:528#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"deamidated and methyl esterified residue","termid":"MOD:01369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated 4-methyl esterified asparagine","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01337"}


id: PBO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 15","termid":"PBO:0072138"}


id: PBO:0030438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA-Asp_C48,_C49,_C60,_C61_and_C62_methylation","termid":"PBO:0030438"}


id: PBO:0054038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1374","termid":"PBO:0054038"}


id: PBO:0113393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113393"}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0051017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 3","termid":"PBO:0051017"}


id: PBO:0082540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to a beta-1,3- and beta-1,6-glucan heteropolymer through a phosphodiester bond; required for propionic acid resistance","termid":"PBO:0082540"}


id: PR:O74419
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC162.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.02c","synonyms":[{"name":"Spom972h-SPCC162.02c","type":"exact"}],"termid":"PR:O74419"}


id: PBO:0017785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor for cytoplasmic methionyl-and glutamyl-tRNA synthetases Asc1 (predicted)","termid":"PBO:0017785"}


id: GO:0046523
data:
  {"annotated_genes":["SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103086],"is_not":false,"summary":null,"term":"GO:0046523"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-5-thio-alpha-D-ribose 1-phosphate = S-methyl-5-thio-D-ribulose 1-phosphate.","definition_xrefs":["EC:5.3.1.23","RHEA:19989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"S-methyl-5-thioribose-1-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237096","Reactome:R-HSA-1299507","MetaCyc:5.3.1.23-RXN","KEGG_REACTION:R04420"],"synonyms":[{"name":"1-PMTR isomerase activity","type":"related"},{"name":"1-phospho-5'-S-methylthioribose isomerase activity","type":"related"},{"name":"5-methylthio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"5-methylthioribose-1-phosphate isomerase activity","type":"exact"},{"name":"MTR-1-P isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate ketol-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"S-methyl-5-thio-alpha-D-ribose-1-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"methylthioribose 1-phosphate isomerase activity","type":"related"}],"termid":"GO:0046523","terms_by_termid":{"GO:0046523":null}}


id: PBO:0032767
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1 kinase consensus phosphorylation site is [RK]-X-[ST]","termid":"PBO:0032767"}


id: GO:1903006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["PMID:22970133","GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein deubiquitination","termid":"GO:1903003"},{"relation_name":"is_a","term_name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"},{"relation_name":"positively_regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein K63-linked deubiquitination","synonyms":[{"name":"activation of protein K63-linked deubiquitination","type":"narrow"},{"name":"up regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked deubiquitination","type":"exact"}],"termid":"GO:1903006"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:22759634","PMID:22704558","PMID:22705370","PMID:22888405","PMID:21078962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: PBO:0086746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; potential Cdc28p substrate; null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2","termid":"PBO:0086746"}


id: PBO:0110427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 2","termid":"PBO:0110427"}


id: PR:Q10413
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.08c","synonyms":[{"name":"Spom972h-SPAC1F3.08c","type":"exact"}],"termid":"PR:Q10413"}


id: PBO:0076794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane epididymal protein 1","termid":"PBO:0076794"}


id: GO:0044391
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