# terms

id: GO:1903901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of viral life cycle.","definition_xrefs":["PMID:18005716","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"negatively_regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral life cycle","synonyms":[{"name":"down regulation of lytic viral life cycle","type":"related"},{"name":"down regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down regulation of viral infectious cycle","type":"related"},{"name":"down regulation of viral life cycle","type":"exact"},{"name":"down regulation of viral replication","type":"related"},{"name":"down-regulation of lytic viral life cycle","type":"related"},{"name":"down-regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"down-regulation of viral infectious cycle","type":"related"},{"name":"down-regulation of viral life cycle","type":"exact"},{"name":"down-regulation of viral replication","type":"related"},{"name":"downregulation of lytic viral life cycle","type":"related"},{"name":"downregulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"downregulation of viral infectious cycle","type":"related"},{"name":"downregulation of viral life cycle","type":"exact"},{"name":"downregulation of viral replication","type":"related"},{"name":"inhibition of lytic viral life cycle","type":"related"},{"name":"inhibition of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"inhibition of viral infectious cycle","type":"related"},{"name":"inhibition of viral life cycle","type":"narrow"},{"name":"inhibition of viral replication","type":"related"},{"name":"negative regulation of lytic viral life cycle","type":"related"},{"name":"negative regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"negative regulation of viral infectious cycle","type":"related"},{"name":"negative regulation of viral replication","type":"related"}],"termid":"GO:1903901"}


id: GO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to pigment granules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"pigment granule maturation","termid":"GO:0048757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"endosome to pigment granule transport","termid":"GO:0043485"}


id: GO:0036181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a linear element. A linear element is a proteinaceous scaffold associated with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:mah","PMID:19756689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to condensed nuclear chromosome","termid":"GO:1903084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to linear element","synonyms":[{"name":"protein localisation to linear element","type":"exact"}],"termid":"GO:0036181"}


id: GO:0042539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic salinity response","synonyms":[{"name":"response to hypotonic salt stress","type":"exact"}],"termid":"GO:0042539"}


id: PBO:0069754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1037, pseudogene","termid":"PBO:0069754"}


id: PBO:0085042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential hydrolase involved in mRNA decapping; activates Xrn1p; may function in a feedback mechanism to regulate deadenylation, contains pyrophosphatase activity and a HIT (histidine triad) motif; acts as inhibitor of neutral trehalase Nth1p; required for growth on glycerol medium; protein abundance increases in response to DNA replication stress; DCS1 has a paralog, DCS2, that arose from the whole genome duplication","termid":"PBO:0085042"}


id: PBO:0072483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 12","termid":"PBO:0072483"}


id: PBO:0061029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninein","termid":"PBO:0061029"}


id: PBO:0052996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 1","termid":"PBO:0052996"}


id: PBO:0056052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 2, pre-mRNA splicing factor","termid":"PBO:0056052"}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: FYPO:0007661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of meiosis I.","definition_xrefs":["PMID:11331883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I metaphase","type":"exact"}],"termid":"FYPO:0007661"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: GO:0102672
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85960],"is_not":false,"summary":null,"term":"GO:0102672"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-saturated fatty acid + O2 = a (2R)-2-hydroperoxy fatty acid.","definition_xrefs":["RHEA:63508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty acid alpha-dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.13.11.92","MetaCyc:RXN-4121"],"synonyms":[{"name":"fatty acid alpha-oxygenase activity","type":"broad"}],"termid":"GO:0102672","terms_by_termid":{"GO:0102672":null}}


id: PBO:0029695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubules_absent_from_cell","termid":"PBO:0029695"}


id: GO:0000178
data:
  {"annotated_genes":["SJAG_01818","SJAG_01431","SJAG_04084","SJAG_04153","SJAG_04321","SJAG_01521","SJAG_03179","SJAG_04824","SJAG_02991","SJAG_00854","SJAG_03745","SJAG_04818","SJAG_01191","SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88332,89162,92011,93346,98169,100484,101329,102529,103526,111497,111944,114332],"is_not":false,"summary":null,"term":"GO:0000178"},{"annotations":[93344,114330,101327,98167,111942,100482,102527,89161,103525,92009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[95047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[111945,89163,114333,93347,92012,97130,88334,102530,111498,100485,101330,98170,103527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime exoribonuclease activity and possibly endoribonuclease activity, producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:26726035","PMID:20531386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"exosome (ribonucleasease complex)","type":"exact"},{"name":"exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000178","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0000178":null,"GO:0045025":null}}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: PBO:0081398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF236 divergent transcript","termid":"PBO:0081398"}


id: PBO:0047246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member B","termid":"PBO:0047246"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: FYPO:0001699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol (PPT). Cells stop growing (and may die) at a concentration of PPT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to PPT","synonyms":[{"name":"hypersensitive to PPT","type":"exact"},{"name":"sensitive to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol","type":"exact"},{"name":"sensitive to PPT during mitotic cell cycle","type":"related"},{"name":"sensitive to PPT during vegetative growth","type":"exact"}],"termid":"FYPO:0001699"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: PBO:0113760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snp27","termid":"PBO:0113760"}


id: PBO:0028022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_polymerase_activity","termid":"PBO:0028022"}


id: PBO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein","termid":"PBO:0000124"}


id: PBO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND5B antisense RNA 1","termid":"PBO:0044878"}


id: PBO:0058876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10392","termid":"PBO:0058876"}


id: GO:0098620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ser-tRNA(Sec) + ATP = Sep-tRNA(Sec) + ADP.","definition_xrefs":["PMID:15317934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0140101","GO:0016740"],"is_obsolete":false,"name":"seryl-selenocysteinyl-tRNA kinase activity","secondary_identifiers":["Reactome:R-HSA-2408507"],"termid":"GO:0098620"}


id: PBO:0074596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9","termid":"PBO:0074596"}


id: PBO:0059578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1","termid":"PBO:0059578"}


id: PBO:0049235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 6","termid":"PBO:0049235"}


id: GO:0051453
data:
  {"annotated_genes":["SJAG_05294","SJAG_01129","SJAG_00301","SJAG_04616","SJAG_00212","SJAG_04955","SJAG_01669","SJAG_02716","SJAG_02023","SJAG_00136","SJAG_01817","SJAG_01913","SJAG_01397","SJAG_04258","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83839,83840,94919,109848],"is_not":false,"summary":null,"term":"GO:0051453"},{"annotations":[86282,91761,85443,84178,100009,95012,114765,96110,97733,85973,98080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:tb","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH","termid":"GO:0030641"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell pH regulation","type":"exact"},{"name":"cellular pH regulation","type":"exact"},{"name":"pH regulation in cell","type":"exact"},{"name":"regulation of cell pH","type":"exact"}],"termid":"GO:0051453","terms_by_termid":{"GO:0007035":null,"GO:0051453":null}}


id: PBO:0026917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_18S_rRNA_acetylation","termid":"PBO:0026917"}


id: GO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.","definition_xrefs":["PMID:20066089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"desmosome","termid":"GO:0030057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extracellular core region of desmosome","synonyms":[{"name":"desmoglea","type":"exact"}],"termid":"GO:0090635"}


id: GO:0140914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a secretory vesicle.","definition_xrefs":["PMID:19496757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}


id: PBO:0087993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD2 has a paralog, TCD1, that arose from the whole genome duplication","termid":"PBO:0087993"}


id: PBO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12B","termid":"PBO:0050699"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: PBO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 3","termid":"PBO:0046068"}


id: PBO:0038762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 7","termid":"PBO:0038762"}


id: PBO:0066906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 207","termid":"PBO:0066906"}


id: GO:0046143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0046143)","synonyms":[{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0046143"}


id: GO:0010086
data:
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id: GO:0106096
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id: PATO:0001743
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id: GO:0035556
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id: PBO:0002907
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id: GO:0032943
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell proliferation","synonyms":[{"name":"PBMC proliferation","type":"narrow"},{"name":"peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032943"}


id: PR:Q9P7F9
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: GO:0098728
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id: PBO:0047260
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member C","termid":"PBO:0047260"}


id: _global:existence_ends_during
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"_global:existence_ends_during_or_before"},{"relation_name":"is_a","term_name":"existence_overlaps","termid":"_global:existence_overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","secondary_identifiers":["RO:0002492"],"termid":"_global:existence_ends_during"}


id: PBO:0054199
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1579","termid":"PBO:0054199"}


id: GO:0001402
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Relaying of environmental signals promoting filamentous growth.","definition_xrefs":["GOC:mcc","PMID:9728395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in filamentous growth","synonyms":[{"name":"MAPKKK cascade (pseudohyphal growth)","type":"related"},{"name":"signal transduction during filamentous growth","type":"related"}],"termid":"GO:0001402"}


id: GO:0003218
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: PBO:0034650
data:
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id: PBO:0059554
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Val (GUN)","termid":"PBO:0059554"}


id: PBO:0031501
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: PBO:0002395
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase Psd2","termid":"PBO:0002395"}


id: PBO:0091361
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human NRAS","termid":"PBO:0091361"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: GO:0098541
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the trans-Golgi network transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of transport vesicle membrane","termid":"GO:0098539"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"cytoplasmic side of trans-Golgi network transport vesicle membrane","synonyms":[{"name":"external side of trans-Golgi network transport vesicle membrane","type":"exact"}],"termid":"GO:0098541"}


id: GO:0003036
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of hydrogen ions are received and are converted to a molecular signal by chemoreceptors in an aortic body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of pH by chemoreceptor signaling","termid":"GO:0003022"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","termid":"GO:0003033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of pH by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of pH by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003036"}


id: GO:0071503
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heparin","termid":"GO:0071503"}


id: PBO:0071905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 43","termid":"PBO:0071905"}


id: PBO:0051972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodotyrosine deiodinase","termid":"PBO:0051972"}


id: PBO:0074699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70I","termid":"PBO:0074699"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: GO:0036456
data:
  {"annotated_genes":["SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91673],"is_not":false,"summary":null,"term":"GO:0036456"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine (S)-S-oxide + thioredoxin -> L-methionine + thioredoxin disulfide + H2O.","definition_xrefs":["GOC:vw","RHEA:19995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine:thioredoxin-disulfide S-oxidoreductase activity","termid":"GO:0033744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-methionine-(S)-S-oxide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036456","terms_by_termid":{"GO:0036456":null}}


id: PBO:0068112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 419","termid":"PBO:0068112"}


id: GO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"somatostatin secretion","termid":"GO:0070253"}


id: PBO:0070134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 48 pseudogene","termid":"PBO:0070134"}


id: GO:0034468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a glycosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005777","GO:0005737"],"is_obsolete":false,"name":"glycosome lumen","termid":"GO:0034468"}


id: PBO:0069425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 689, pseudogene","termid":"PBO:0069425"}


id: GO:0007178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0007178"}


id: PBO:0063331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 7","termid":"PBO:0063331"}


id: PBO:0057073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 153-1","termid":"PBO:0057073"}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: PBO:0045936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin A1","termid":"PBO:0045936"}


id: PBO:0083526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF RTT103","termid":"PBO:0083526"}


id: GO:0140794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone 3 L-arginyl = histone 3 L-citrullyl + NH4+, resulting in histone citrullination.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine deiminase activity","termid":"GO:0004668"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"histone arginine deiminase activity","synonyms":[{"name":"histone citrullination","type":"related"},{"name":"histone-arginine deiminase activity","type":"exact"}],"termid":"GO:0140794"}


id: PBO:0059114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 3","termid":"PBO:0059114"}


id: PBO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 2","termid":"PBO:0046115"}


id: GO:1904643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a curcumin stimulus.","definition_xrefs":["PMID:24755072","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to curcumin","termid":"GO:1904643"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: GO:0030570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.","definition_xrefs":["EC:4.2.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pectate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.2-RXN"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan lyase activity","type":"related"},{"name":"PGA lyase activity","type":"related"},{"name":"PPase-N activity","type":"related"},{"name":"alpha-1,4-D-endopolygalacturonic acid lyase activity","type":"related"},{"name":"endo-alpha-1,4-polygalacturonic acid lyase activity","type":"related"},{"name":"endogalacturonate transeliminase activity","type":"related"},{"name":"endopectin methyltranseliminase activity","type":"related"},{"name":"pectate transeliminase activity","type":"related"},{"name":"pectic acid lyase activity","type":"related"},{"name":"pectic acid transeliminase activity","type":"related"},{"name":"pectic lyase activity","type":"broad"},{"name":"pectin trans-eliminase activity","type":"broad"},{"name":"polygalacturonate lyase activity","type":"related"},{"name":"polygalacturonic acid lyase activity","type":"related"},{"name":"polygalacturonic acid trans-eliminase activity","type":"related"},{"name":"polygalacturonic transeliminase activity","type":"related"}],"termid":"GO:0030570"}


id: GO:0006457
data:
  {"annotated_genes":["SJAG_02919","SJAG_00790","SJAG_04352","SJAG_04741","SJAG_01737","SJAG_04187","SJAG_04602","SJAG_03030","SJAG_05414","SJAG_01615","SJAG_00353","SJAG_03267","SJAG_02875","SJAG_05191","SJAG_01747","SJAG_03463","SJAG_05189","SJAG_00750","SJAG_00112","SJAG_02270","SJAG_02301","SJAG_04371","SJAG_00447","SJAG_02926","SJAG_02378","SJAG_01510","SJAG_03320","SJAG_02489","SJAG_01186","SJAG_00436","SJAG_02825","SJAG_02014","SJAG_00524","SJAG_03414","SJAG_01246","SJAG_01626","SJAG_01684","SJAG_03135","SJAG_05206","SJAG_03052","SJAG_00609","SJAG_04055","SJAG_01160","SJAG_00196","SJAG_04336","SJAG_02694","SJAG_01733","SJAG_00403","SJAG_02032","SJAG_03815","SJAG_03784","SJAG_03992","SJAG_02827","SJAG_03601","SJAG_04784","SJAG_03570","SJAG_00983","SJAG_03238","SJAG_00558","SJAG_04844","SJAG_01641","SJAG_04518","SJAG_01002","SJAG_01121","SJAG_02672","SJAG_04046","SJAG_01664","SJAG_03166","SJAG_03955","SJAG_04121","SJAG_00564","SJAG_04228","SJAG_01914","SJAG_00954","SJAG_01545","SJAG_03794","SJAG_02367","SJAG_01874","SJAG_02461","SJAG_03022","SJAG_02413","SJAG_00288","SJAG_01052","SJAG_00505","SJAG_04012","SJAG_03717","SJAG_04074","SJAG_04567","SJAG_03094","SJAG_00574","SJAG_01714","SJAG_04014","SJAG_01526","SJAG_04197","SJAG_01647","SJAG_04511","SJAG_03237","SJAG_01038","SJAG_04817"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58605,66709,66879,76800,84982,86288,87003,87349,88082,88226,89011,89040,89356,90622,91844,92860,93067,93240,93611,93947,94548,95579,96807,96985,97919,98931,100436,100506,100757,100888,102093,102297,102319,102554,103416,103722,104112,105297,105598,105954,106085,106086,106933,107428,108993,109543,111797,112406,112858,113303,113983,114622],"is_not":false,"summary":null,"term":"GO:0006457"},{"annotations":[99819,101169,96806,103379,113688,100763,94017,113786,83624,93667,94664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051083"},{"annotations":[91717,85426,92440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006458"},{"annotations":[89958,91147,112857,113889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061077"},{"annotations":[96663,98546,89591,92656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007023"},{"annotations":[106056,101289,92441,114443,99022,88434,84754,106906,109730,87004,110847,88410,106113,91821,99283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034975"},{"annotations":[94594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022417"},{"annotations":[100307,84475,95340,111560,106911,89191,106357,112799,113217,98424,84052,100764,84879,107016,74954,84880,99284,111559,99023,101073,94665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042026"}]},"cv_name":"biological_process","definition":"The 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id: PBO:0050467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOX transcript antisense RNA","termid":"PBO:0050467"}


id: PBO:0004697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S10 (predicted)","termid":"PBO:0004697"}


id: PBO:0089457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein Qtr3-like","termid":"PBO:0089457"}


id: PBO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_astral_microtubule_nucleation_during_mitosis","termid":"PBO:0035962"}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: PBO:0058160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4454","termid":"PBO:0058160"}


id: PBO:0055975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 1","termid":"PBO:0055975"}


id: PBO:0061995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily E member 1 pseudogene","termid":"PBO:0061995"}


id: GO:0102007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone = H+ + an N-acyl-L-homoserine.","definition_xrefs":["EC:3.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acyl-L-homoserine-lactone lactonohydrolase activity","secondary_identifiers":["Reactome:R-HSA-9756150","Reactome:R-HSA-9756136","RHEA:22576","Reactome:R-HSA-9756177","Reactome:R-HSA-8932633","MetaCyc:3.1.1.81-RXN"],"termid":"GO:0102007"}


id: GO:0004816
data:
  {"annotated_genes":["SJAG_02517","SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98367,101150],"is_not":false,"summary":null,"term":"GO:0004816"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-asparagine + ATP + tRNA(Asn) = AMP + Asn-tRNA(Asn) + diphosphate + 2 H+.","definition_xrefs":["RHEA:11180","EC:6.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02517":null,"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"asparagine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03648","Reactome:R-HSA-379996","MetaCyc:ASPARAGINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380227"],"synonyms":[{"name":"L-asparagine:tRNAAsn ligase (AMP-forming)","type":"related"},{"name":"asparagine translase activity","type":"related"},{"name":"asparaginyl transfer RNA synthetase activity","type":"related"},{"name":"asparaginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"asparaginyl-tRNA synthetase activity","type":"exact"},{"name":"asparaginyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"asparagyl-transfer RNA synthetase activity","type":"related"}],"termid":"GO:0004816","terms_by_termid":{"GO:0004816":null}}


id: PBO:0109036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 20, pseudogene","termid":"PBO:0109036"}


id: GO:0036143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kringle domain. Kringle domains are protein domains that fold into large loops stabilized by 3 disulfide linkages, and are important in protein-protein interactions with blood coagulation factors.","definition_xrefs":["GOC:yaf","Wikipedia:Kringle_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"kringle domain binding","termid":"GO:0036143"}


id: GO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that functions with the RNA exosome and contributes to the degradation of abberant transcripts.","definition_xrefs":["PMID:21855801","PMID:29844170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear exosome targeting complex","synonyms":[{"name":"NEXT complex","type":"exact"}],"termid":"GO:0062141"}


id: PBO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 42","termid":"PBO:0044355"}


id: PBO:0052992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 4","termid":"PBO:0052992"}


id: PBO:0067809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 111","termid":"PBO:0067809"}


id: GO:0047209
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coniferyl alcohol + UDP-D-glucose = coniferin + UDP.","definition_xrefs":["EC:2.4.1.111","MetaCyc:2.4.1.111-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"coniferyl-alcohol glucosyltransferase activity","secondary_identifiers":["RHEA:23944"],"synonyms":[{"name":"UDP-glucose coniferyl alcohol glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:coniferyl-alcohol 4'-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-coniferyl alcohol glucosyltransferase activity","type":"related"}],"termid":"GO:0047209"}


id: PBO:0028512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation","termid":"PBO:0028512"}


id: PBO:0065561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 1","termid":"PBO:0065561"}


id: GO:0035453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid membrane","termid":"GO:0035452"},{"relation_name":"part_of","term_name":"plastid inner membrane","termid":"GO:0009528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of plastid inner membrane","synonyms":[{"name":"extrinsic to plastid inner membrane","type":"narrow"},{"name":"peripheral to plastid inner membrane","type":"exact"}],"termid":"GO:0035453"}


id: GO:0140629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a small conductance calcium-activated potassium channel.","definition_xrefs":["PMID:20562108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"small conductance calcium-activated potassium channel inhibitor activity","termid":"GO:0140629"}


id: GO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of coagulation, the process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of coagulation","synonyms":[{"name":"regulation of clotting","type":"exact"}],"termid":"GO:0050818"}


id: GO:0030154
data:
  {"annotated_genes":["SJAG_00821","SJAG_04615","SJAG_01662","SJAG_01321","SJAG_04080","SJAG_02320","SJAG_04271","SJAG_04868","SJAG_02529","SJAG_00826","SJAG_02241","SJAG_04483","SJAG_04922","SJAG_00971","SJAG_00405","SJAG_00486","SJAG_00974","SJAG_04275","SJAG_03688","SJAG_04901","SJAG_04859","SJAG_04010","SJAG_04236","SJAG_03013","SJAG_03536","SJAG_01531","SJAG_03587","SJAG_04238","SJAG_03746","SJAG_01483","SJAG_03915","SJAG_03090","SJAG_02736","SJAG_03557","SJAG_05309","SJAG_04140","SJAG_02169","SJAG_02712","SJAG_02392","SJAG_04781","SJAG_03057","SJAG_04184","SJAG_00114","SJAG_00514","SJAG_03483","SJAG_03250","SJAG_03581","SJAG_02248","SJAG_04853","SJAG_00993","SJAG_04470","SJAG_00663","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91949,85991,90683],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[114574,92625,100225,93040,92972,96824,103802,101198,106191,108784,110008,91475,107585],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030437"},{"annotations":[90569],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[113827,84352,86368,84843,87870],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[100268,105152,110153,113828,113837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[101049,93690,87603,105379,106192],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[95926,91476,93650,87395,95925,114575,112993,94923,115051,93691,95995,110009,106193,97806,101365,114868,103465],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[110010,92973,95928,102908,95927,93651,103803,88391,99014,100226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107274],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86841],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98387],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86843],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88287],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[102087,95929,95930,96214,90610,112037],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_differentiation"],"termid":"GO:0030154","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0034876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoniazid + H2O = isonicotinate + hydrazine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinic acid hydrazide hydrolase activity (obsolete GO:0034876)","termid":"GO:0034876"}


id: SO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-palindromic sequence found in the promoters of genes whose expression is regulated in response to androgen.","definition_xrefs":["PMID:21796522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen_response_element","synonyms":[{"name":"ARE","type":"exact"},{"name":"androgen response element","type":"exact"}],"termid":"SO:0001853"}


id: GO:1990434
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the lower end of a stereocilia tip link that provides the anchor in the stereocilia membrane at the tip of the stereocilium from which the tip link rises.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lower tip-link density","synonyms":[{"name":"LTLD","type":"exact"}],"termid":"GO:1990434"}


id: GO:0051503
data:
  {"annotated_genes":["SJAG_00612","SJAG_04325","SJAG_03452","SJAG_04328","SJAG_03334","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[106969,98950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[97451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[98951,106972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[88999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of adenine nucleotides, ATP, ADP, and/or AMP, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transport","termid":"GO:0015865"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"adenine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051503","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0140021":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: GO:0030234
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id: FYPO:0005748
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport","termid":"FYPO:0005747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein export from nucleus during glucose starvation","synonyms":[{"name":"normal protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"normal protein export from nucleus during glucose depletion","type":"exact"},{"name":"normal protein export from nucleus during glucose deprivation","type":"exact"},{"name":"normal protein export from nucleus during glucose limitation","type":"related"}],"termid":"FYPO:0005748"}


id: FYPO:0003557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is higher than normal. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["SO:0000644","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered antisense RNA level during vegetative growth","termid":"FYPO:0005857"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased antisense RNA level","synonyms":[{"name":"increased antisense RNA accumulation","type":"related"},{"name":"increased antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased antisense RNA level during vegetative growth","type":"exact"},{"name":"increased antisense RNA transcript level","type":"exact"},{"name":"increased level of antisense transcripts","type":"exact"}],"termid":"FYPO:0003557"}


id: GO:0044498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in modulation of blood pressure in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044498"}


id: PBO:0039854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 20","termid":"PBO:0039854"}


id: PBO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 5","termid":"PBO:0043315"}


id: PBO:0054350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1743","termid":"PBO:0054350"}


id: GO:0044786
data:
  {"annotated_genes":["SJAG_05239","SJAG_04879","SJAG_03843","SJAG_01677","SJAG_01210","SJAG_04272","SJAG_05197","SJAG_04210","SJAG_01624","SJAG_04183","SJAG_02198","SJAG_00857","SJAG_02439","SJAG_04816","SJAG_00729","SJAG_03525","SJAG_03720","SJAG_00814","SJAG_00874","SJAG_00618","SJAG_03722","SJAG_00863","SJAG_02908","SJAG_05301","SJAG_02098","SJAG_06022","SJAG_02079","SJAG_00364","SJAG_04341","SJAG_03855","SJAG_01267","SJAG_01076","SJAG_02627","SJAG_04623","SJAG_05232","SJAG_00311","SJAG_01374","SJAG_05180","SJAG_02992","SJAG_02294","SJAG_04994","SJAG_02667","SJAG_01354","SJAG_01410","SJAG_01221","SJAG_02172","SJAG_03695","SJAG_03495","SJAG_04877","SJAG_02610","SJAG_01644","SJAG_03927","SJAG_00399","SJAG_03160","SJAG_02690","SJAG_00573","SJAG_02162","SJAG_02818","SJAG_00884","SJAG_01762","SJAG_02074","SJAG_03840","SJAG_01823","SJAG_04150","SJAG_00198","SJAG_03780","SJAG_03438","SJAG_02607","SJAG_01010","SJAG_02394","SJAG_01832","SJAG_02822","SJAG_01884","SJAG_00400","SJAG_00247","SJAG_02348","SJAG_00696","SJAG_02182","SJAG_00536","SJAG_03451","SJAG_03048","SJAG_02039","SJAG_02199","SJAG_00272","SJAG_02800","SJAG_04995","SJAG_01068","SJAG_03898","SJAG_04190","SJAG_00728","SJAG_04671","SJAG_00327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93261,108814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902298"},{"annotations":[106020,109638,111464,103426],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[91373,85700,98922,111341,101007,111171,106023,109233,103325,90067,103428,108591,103060,109639,91340,105187,108352,111466,91162,100320],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[99419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[105650,85713,107625,107977,95379,112325,103917,100513,94224,102496,108904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[111173,113392,103919,102497,89081,99050,111343,103327,88062,107978,86558,106637,106298,103429,108110,93432,90656,93535,109234,111468,90047,104130,108514,109255,109641,101408,109556,107718,107461,95512,95519],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[114222,100324,91342,98924,101009,105189],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[90069,101010,91343,100325,103061,103430,91374,85701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[107834,105204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[86559,95520,106638],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[106639,111086,99421],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[91177,92118,85295,112873,92280,103840,95160,87061,105161,108594,95044,94349,90931,105631,103816],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[112918,104968],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[98468,93876,104969,85488],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99051,93536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[96741,97597,100250,88658,96705,88744,91164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[108113,113333,99422],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[102694,85190,112305,98473],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[98477],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[103328,103432,93537,107627,106299,91344,102498,88063,111174,111344,111345,100421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[95456],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[100251,84446,108595,99042],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that takes place as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"cell cycle 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cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044786","terms_by_termid":{"GO:0006279":null,"GO:0140529":null,"GO:0140530":null,"GO:1902298":null,"GO:1902315":null,"GO:1902969":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904514":null,"GO:1990426":null,"GO:1990505":null}}


id: PBO:0068139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 446","termid":"PBO:0068139"}


id: FYPO:0004226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"},{"relation_name":"is_a","term_name":"abnormal nucleosome binding","termid":"FYPO:0004225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished nucleosome binding","synonyms":[{"name":"nucleosome binding abolished","type":"exact"}],"termid":"FYPO:0004226"}


id: SO:0001409
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region which is intended for use in an experiment.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biomaterial_region","synonyms":[{"name":"biomaterial region","type":"exact"}],"termid":"SO:0001409"}


id: PBO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 2, pseudogene","termid":"PBO:0051402"}


id: PBO:0083238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; encoded within the 25S rRNA gene on the opposite strand","termid":"PBO:0083238"}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: GO:1902671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","GOC:TermGenie","ISBN:9780124260207","GO_REF:0000064","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left anterior flagellum","termid":"GO:0097554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"left anterior basal body","synonyms":[{"name":"cilial basal body of left anterior cilium","type":"exact"},{"name":"cilial basal body of left anterior flagellum","type":"exact"},{"name":"ciliary basal body of left anterior cilium","type":"exact"},{"name":"ciliary basal body of left anterior flagellum","type":"exact"},{"name":"cilium basal body of left anterior cilium","type":"exact"},{"name":"cilium basal body of left anterior flagellum","type":"exact"},{"name":"left anterior flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left anterior cilium","type":"exact"},{"name":"microtubule basal body of left anterior flagellum","type":"exact"}],"termid":"GO:1902671"}


id: PBO:0061493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nik related kinase","termid":"PBO:0061493"}


id: PBO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains IDP (GATA)","termid":"PBO:0003817"}


id: PBO:0088375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, tricarboxylic acid Yhm2","termid":"PBO:0088375"}


id: PBO:0063750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 15","termid":"PBO:0063750"}


id: GO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-alkyl-2-acetyl-sn-glycerol + acyl-CoA = 1-O-alkyl-2-acetyl-3-acyl-sn-glycerol + CoA.","definition_xrefs":["MetaCyc:2.3.1.125-RXN","EC:2.3.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"1-alkyl-2-acetylglycerol O-acyltransferase activity","secondary_identifiers":["RHEA:21996"],"synonyms":[{"name":"1-hexadecyl-2-acetylglycerol acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-O-alkyl-2-acetyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0047167"}


id: GO:0032701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["GOC:mah","PMID:23710316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-18 production","termid":"GO:0032661"},{"relation_name":"negatively_regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-18 production","secondary_identifiers":["GO:0150121","GO:0045382"],"synonyms":[{"name":"down regulation of interleukin-18 production","type":"exact"},{"name":"down-regulation of interleukin-18 production","type":"exact"},{"name":"downregulation of interleukin-18 production","type":"exact"},{"name":"inhibition of interleukin-18 production","type":"narrow"},{"name":"negative regulation of IL-18 production","type":"exact"},{"name":"negative regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032701"}


id: GO:0018473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-2-methyl-5-isopropylhexa-2,5-dienal + NAD+ + H2O = NADH + H+ + cis-2-methyl-5-isopropylhexa-2,5-dienoic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-2-methyl-5-isopropylhexa-2,5-dienal dehydrogenase activity (obsolete GO:0018473)","termid":"GO:0018473"}


id: GO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+.","definition_xrefs":["EC:1.1.1.271","MetaCyc:1.1.1.271-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"GDP-L-fucose synthase activity","secondary_identifiers":["Reactome:R-HSA-6787642","RHEA:18885"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase activity","type":"related"},{"name":"GDP-L-fucose:NADP+ 4-oxidoreductase (3,5-epimerizing)","type":"related"},{"name":"GDP-fucose synthetase activity","type":"related"}],"termid":"GO:0050577"}


id: PR:O74453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p21-activated protein kinase-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04409","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shk1 kinase-binding protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.08c","secondary_identifiers":["UniProtKB:O74453"],"synonyms":[{"name":"Spom972h-PAK1IP1","type":"exact"}],"termid":"PR:O74453"}


id: GO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of kappa-opioid receptors, including high affinity for dynorphins.","definition_xrefs":["IUPHAR_RECEPTOR:318"],"gene_count":0,"genotype_count":0,"name":"obsolete kappa-opioid receptor activity (obsolete GO:0004987)","secondary_identifiers":["Wikipedia:Kappa_Opioid_receptor"],"synonyms":[{"name":"kappa-opioid receptor activity","type":"exact"}],"termid":"GO:0004987"}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: GO:0098832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A recycling endosome that is organized around the microtubule organizing center, close to the nucleus. This is the main recycling endosome of most cells. It receives input from the Golgi as well as recycled molecules from early endosomes.","definition_xrefs":["PMID:19696797","PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"peri-centrosomal recycling endosome","termid":"GO:0098832"}


id: GO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + spermidine = 1,3-diaminopropane + 4-aminobutanal + H2O2.","definition_xrefs":["RHEA:25820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"spermidine oxidase (propane-1,3-diamine-forming) activity","secondary_identifiers":["MetaCyc:RXN-10747","KEGG_REACTION:R01914","EC:1.5.3.14"],"synonyms":[{"name":"polyamine oxidase (propane-1,3-diamine-forming) activity","type":"broad"},{"name":"spermidine:(acceptor) oxidoreductase activity","type":"broad"}],"termid":"GO:0052896"}


id: PATO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the reduction in amount of water the bearer contains.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Dehydrated"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"water composition","termid":"PATO:0001800"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased water composition","synonyms":[{"name":"dehydrated","type":"exact"},{"name":"dry","type":"related"}],"termid":"PATO:0001801"}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: GO:0009171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009157"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate biosynthetic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate formation","type":"exact"},{"name":"purine deoxyribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009171"}


id: PBO:0077250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMED2 divergent transcript","termid":"PBO:0077250"}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: PBO:0040989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA2-SMG1P6 readthrough","termid":"PBO:0040989"}


id: PBO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035787"}


id: GO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"labyrinthine layer morphogenesis","termid":"GO:0060713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labyrinthine layer formation","termid":"GO:0060714"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: GO:0007362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the terminal regions (the two non-segmented ends) of the embryo by the gap genes; exemplified in insects by the actions of huckebein and tailless gene products.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"terminal region determination","termid":"GO:0007362"}


id: SO:0002317
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that results in no gene product.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"null_mutation","termid":"SO:0002055"},{"relation_name":"is_a","term_name":"decreased_gene_product_level","termid":"SO:0002316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent_gene_product","synonyms":[{"name":"absent gene product","type":"exact"}],"termid":"SO:0002317"}


id: PBO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator related","termid":"PBO:0004958"}


id: PR:Q09781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps101 gene.","definition_xrefs":["UniProtKB:Q09781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.02c","synonyms":[{"name":"S3aE-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps101","type":"exact"}],"termid":"PR:Q09781"}


id: FYPO:0002371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores, undivided germinated spores, and germinated spores that go on to divide once or twice. Some germinated spores remain septated and do not complete cell division.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, undivided germinated spores and divided germinated spores (obsolete FYPO:0002371)","synonyms":[{"name":"inviable mixed population including spores and undivided and divided germinated spores","type":"exact"}],"termid":"FYPO:0002371"}


id: GO:0039719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory derived from the Golgi in which Bunyaviridae replication takes place. Tubes are membranous structures close to the assembly and budding sites, and their function may be to connect viral replication and morphogenesis inside viral factories.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tube viral factory","termid":"GO:0039719"}


id: PBO:0045941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B1","termid":"PBO:0045941"}


id: PBO:0073242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 7","termid":"PBO:0073242"}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: PBO:0077612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 3","termid":"PBO:0077612"}


id: PBO:0043070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 4","termid":"PBO:0043070"}


id: GO:0080136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that enables cells to respond in a more rapid and robust manner than nonprimed cells to much lower levels of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:19318610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"priming of cellular response to stress","synonyms":[{"name":"priming of response to stress","type":"broad"},{"name":"priming of stress response","type":"broad"}],"termid":"GO:0080136"}


id: GO:0160020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:32015325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of ferroptosis","termid":"GO:0110075"},{"relation_name":"positively_regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferroptosis","termid":"GO:0160020"}


id: PBO:0082287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF family GTPase; component of the COPII vesicle coat; required for transport vesicle formation during ER to Golgi protein transport; lowers membrane rigidity aiding vesicle formation; localizes to ER-mitochondrial contact sites where it enhances membrane curvature, thereby reducing contact size via its N-terminal amphipathic helix; regulates mitochondrial fission and fusion dynamics","termid":"PBO:0082287"}


id: PBO:0003497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase Wis1","termid":"PBO:0003497"}


id: GO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = alpha-D-glucose 1,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:13377","EC:2.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"phosphoglucokinase activity","secondary_identifiers":["KEGG_REACTION:R00949","MetaCyc:PHOSPHOGLUCOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"ATP:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose-phosphate kinase activity","type":"related"},{"name":"phosphoglucokinase (phosphorylating)","type":"related"}],"termid":"GO:0050190"}


id: MOD:00106
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine amide.","definition_xrefs":["PubMed:1390774","RESID:AA0097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine amide","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanamide","type":"exact"},{"name":"L-threonine amide","type":"exact"},{"name":"MOD_RES Threonine amide","type":"exact"},{"name":"ThrN","type":"exact"},{"name":"amidated L-threonine","type":"exact"},{"name":"threoninamide","type":"exact"}],"termid":"MOD:00106"}


id: GO:0048592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye morphogenesis","secondary_identifiers":["GO:0048748"],"termid":"GO:0048592"}


id: PR:O14183
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug114 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 114 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.08","synonyms":[{"name":"Spom972h-mug114","type":"exact"}],"termid":"PR:O14183"}


id: PBO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DCP1B","termid":"PBO:0018077"}


id: GO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium germination","synonyms":[{"name":"modulation of sporangium germination","type":"narrow"},{"name":"modulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075223"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","secondary_identifiers":["MetaCyc:SUCUTIL-PWY"],"synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: GO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of elastin biosynthetic process","termid":"GO:0051543"},{"relation_name":"negatively_regulates","term_name":"elastin biosynthetic process","termid":"GO:0051542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of elastin biosynthetic process","synonyms":[{"name":"down regulation of elastin biosynthetic process","type":"exact"},{"name":"down-regulation of elastin biosynthetic process","type":"exact"},{"name":"downregulation of elastin biosynthetic process","type":"exact"},{"name":"inhibition of elastin biosynthetic process","type":"narrow"}],"termid":"GO:0051545"}


id: PBO:0011110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt6 binding correlates with that of RNAPII at the heterochromatin","termid":"PBO:0011110"}


id: GO:0000470
data:
  {"annotated_genes":["SJAG_02952","SJAG_05190","SJAG_00752","SJAG_00537","SJAG_00722","SJAG_04492","SJAG_03789","SJAG_02275","SJAG_00949","SJAG_04289","SJAG_03012","SJAG_01581","SJAG_04669","SJAG_04330","SJAG_04108","SJAG_00689","SJAG_02417","SJAG_01811","SJAG_02374","SJAG_02830","SJAG_05223","SJAG_00882","SJAG_00749"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88907,88996,103956,109688,112234,114935],"is_not":false,"summary":null,"term":"GO:0000470"},{"annotations":[87795,114599,91062,100212],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[113718,102078,96832,113697,94052,111839,85967,88487,85755,94085,106888,110912,111838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000463"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01581":null,"SJAG_01811":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04330":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000470","terms_by_termid":{"GO:0000448":null,"GO:0000463":null,"GO:0000470":null}}


id: PBO:0038424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-2-macroglobulin like 1","termid":"PBO:0038424"}


id: PBO:0064246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D family member 5","termid":"PBO:0064246"}


id: PBO:0041569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 173","termid":"PBO:0041569"}


id: PBO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor","termid":"PBO:0060875"}


id: GO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U6atac small nuclear RNA (U6atac snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6atac snRNA binding","termid":"GO:0030624"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: PBO:0109600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 family member B, pseudogene","termid":"PBO:0109600"}


id: PBO:0051417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-11","termid":"PBO:0051417"}


id: PBO:0042149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 8","termid":"PBO:0042149"}


id: GO:0140887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["PMID:34471130","PMID:35308047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of chromatin organization","termid":"GO:1905269"},{"relation_name":"positively_regulates","term_name":"nucleosome assembly","termid":"GO:0006334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleosome disassembly","termid":"GO:0140887"}


id: PBO:0056954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 18b","termid":"PBO:0056954"}


id: GO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:go_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"juvenile hormone secretion","termid":"GO:0045443"}


id: GO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0065003","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"mitotic spindle-templated microtubule nucleation","termid":"GO:0090221"}


id: FYPO:0003134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal during a cellular response to calcium starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall alpha-glucan level","termid":"FYPO:0001084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation","synonyms":[{"name":"increased cell wall alpha-D-glucan level during cellular response to calcium starvation","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation during cellular response to calcium starvation","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003134"}


id: PBO:0012016
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HGT1","termid":"PBO:0012016"}


id: GO:0010399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the alternating alpha-(1->2)-linked rhamnose and alpha-(1->2)-linked B-galacturonic acid residues of the rhamnogalacturonan I backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I metabolic process","termid":"GO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"rhamnogalacturonan I backbone metabolic process","synonyms":[{"name":"rhamnogalacturonan I backbone metabolism","type":"exact"}],"termid":"GO:0010399"}


id: PBO:0043748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7B pseudogene 2","termid":"PBO:0043748"}


id: MOD:00772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a vanadium atom or a cluster containing vanadium for hydrogen atoms, or that coordinates a vanadium ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadium containing modified residue","synonyms":[{"name":"VRes","type":"exact"}],"termid":"MOD:00772"}


id: PBO:0065860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB17 divergent transcript","termid":"PBO:0065860"}


id: FYPO:0002518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002517"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abolished response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abolished cell cycle checkpoint arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic cell cycle checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0002518"}


id: FYPO:0004257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus and has a larger volume than normal.","definition_xrefs":["PomBase:mah","PMID:10503548"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"swollen multinucleate vegetative cell","synonyms":[{"name":"enlarged multinucleate cell","type":"related"},{"name":"large multinucleate cell","type":"related"},{"name":"multinucleate cell with increased cell size","type":"related"},{"name":"multinucleate cell with increased cell volume","type":"exact"},{"name":"swollen multinucleate cell during vegetative growth","type":"exact"},{"name":"swollen multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004257"}


id: PBO:0067468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 597, pseudogene","termid":"PBO:0067468"}


id: PBO:0057153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 301a","termid":"PBO:0057153"}


id: GO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen bound to the B cell receptor.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following receptor mediated endocytosis","termid":"GO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation mediated by B cell receptor uptake of antigen","synonyms":[{"name":"B lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-cell antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"}],"termid":"GO:0002417"}


id: PBO:0004330
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Spindle Disanchored","termid":"PBO:0004330"}


id: GO:0039699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An innate immune response evasion mechanism in which a symbiont methylates the 2'-O-ribose of the first or second transcribed nucleotide of its mRNAs. Methylation allows evasion of the host innate immune response, which degrades cap0 (non-methylated) mRNAs. This mechanism of immune evasion is used by viruses.","definition_xrefs":["PMID:35215972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of mRNA degradation by host via mRNA cap methylation","synonyms":[{"name":"IFIT mRNA restriction evasion by virus","type":"exact"},{"name":"evasion of mRNA degradation by host via mRNA cap methylation","type":"exact"},{"name":"viral mRNA cap methylation","type":"related"}],"termid":"GO:0039699"}


id: PBO:0049078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 119","termid":"PBO:0049078"}


id: PBO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner nuclear membrane protein Ima1","termid":"PBO:0018192"}


id: GO:0044271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound biosynthetic process (obsolete GO:0044271)","termid":"GO:0044271"}


id: GO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + thioredoxin disulfide + H2O = CTP + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["MetaCyc:1.17.4.2-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reductase activity (obsolete GO:0051065)","synonyms":[{"name":"CTP reduction","type":"related"}],"termid":"GO:0051065"}


id: PBO:0111784
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBP type","termid":"PBO:0111784"}


id: GO:0047227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1L-1-O-(indol-3-yl)acetyl-myo-inositol + UDP-D-galactose = 5-O-(indol-3-ylacetyl)-myo-inositol D-galactoside + H+ + UDP.","definition_xrefs":["RHEA:21148","EC:2.4.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"indolylacetyl-myo-inositol galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04334","MetaCyc:2.4.1.156-RXN"],"synonyms":[{"name":"UDP-galactose:(indol-3-yl)acetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:indol-3-ylacetyl-myo-inositol 5-O-D-galactosyltransferase activity","type":"related"},{"name":"indol-3-ylacetyl-myo-inositol galactoside synthase activity","type":"related"},{"name":"uridine diphosphogalactose-indolylacetylinositol galactosyltransferase activity","type":"related"}],"termid":"GO:0047227"}


id: GO:0019864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgG isotype.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgG binding","termid":"GO:0019864"}


id: GO:0098887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the postsynaptic endosome to the postsynaptic membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport, endosome to plasma membrane","termid":"GO:0099639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor transport, endosome to postsynaptic membrane","synonyms":[{"name":"postsynaptic neurotransmitter receptor endosomal trafficking","type":"broad"}],"termid":"GO:0098887"}


id: PBO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs20 (predicted)","termid":"PBO:0003763"}


id: PATO:0002384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxy","termid":"PATO:0002384"}


id: GO:1903749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16857185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"activation of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"positive regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"positive regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization to mitochondrion","type":"exact"}],"termid":"GO:1903749"}


id: PBO:0082222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in down-regulation of general amino acid transporter Gap1p upon shift to preferred nitrogen source; involved in lactate transporter Jen1p endocytosis; BUL1 has a paralog, BUL2, that arose from the whole genome duplication","termid":"PBO:0082222"}


id: PBO:0029433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029433"}


id: MOD:00082
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to pros-methyl-L-histidine (N-pi-methyl-L-histidine, 3'-methyl-L-histidine).","definition_xrefs":["PubMed:8076","PubMed:8645219","PubMed:11875433","PubMed:3467365","PubMed:6692818","RESID:AA0073","PubMed:10660523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated L-histidine","termid":"MOD:00724"},{"relation_name":"is_a","term_name":"monomethylated L-histidine","termid":"MOD:02038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"3'-methyl-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-methyl-3H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1-methylhistidine","type":"related"},{"name":"3'-methyl-L-histidine","type":"exact"},{"name":"MOD_RES Pros-methylhistidine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylhistidine","type":"exact"},{"name":"N(pi)-methylhistidine","type":"exact"},{"name":"NpMeHis","type":"exact"},{"name":"pros-methylated L-histidine","type":"exact"},{"name":"pros-methylhistidine","type":"exact"}],"termid":"MOD:00082"}


id: PBO:0028666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028666"}


id: PBO:0045929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 2","termid":"PBO:0045929"}


id: GO:0016144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-glycosides, any compound in which a glycosyl group has been substituted into a thiol group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-glycoside biosynthetic process","synonyms":[{"name":"S-glycoside anabolism","type":"exact"},{"name":"S-glycoside biosynthesis","type":"exact"},{"name":"S-glycoside formation","type":"exact"},{"name":"S-glycoside synthesis","type":"exact"},{"name":"thioglycoside biosynthesis","type":"exact"},{"name":"thioglycoside biosynthetic process","type":"exact"}],"termid":"GO:0016144"}


id: PATO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001092 flux value (obsolete PATO:0001092)","termid":"PATO:0001092"}


id: GO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The last stage of flower development during which programmed degradation of macromolecules and nutrient recycling take place.","definition_xrefs":["PMID:21689171","PMID:19380421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ senescence","termid":"GO:0090693"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ senescence","termid":"GO:0080187"}


id: GO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue, which typically differentiates from monocytes.","definition_xrefs":["GOC:hjd","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast proliferation","termid":"GO:0002158"}


id: PBO:0070004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1300, pseudogene","termid":"PBO:0070004"}


id: PBO:0048677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase","termid":"PBO:0048677"}


id: PBO:0014592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor Sre2","termid":"PBO:0014592"}


id: GO:0102058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-leucine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-leucine.","definition_xrefs":["PMID:17291501","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-leucine synthetase activity (obsolete GO:0102058)","termid":"GO:0102058"}


id: PR:P40902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp7 gene.","definition_xrefs":["UniProtKB:P40902","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.13c","synonyms":[{"name":"Spom972h-isp7","type":"exact"}],"termid":"PR:P40902"}


id: PBO:0059756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 30","termid":"PBO:0059756"}


id: GO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"positive regulation of VLDL remodeling","type":"exact"},{"name":"positive regulation of VLDL remodelling","type":"exact"},{"name":"positive regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010902"}


id: PBO:0078227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-2 (pseudogene)","termid":"PBO:0078227"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01818","PANTHER:PTHR10741:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: GO:1905586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24472721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of outer hair cell apoptotic process","termid":"GO:1905585"},{"relation_name":"negatively_regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of outer hair cell apoptotic process","synonyms":[{"name":"down regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of outer hair cell apoptotic process","type":"exact"},{"name":"inhibition of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of cochlear outer hair cell apoptotic process","type":"narrow"},{"name":"inhibition of outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of outer hair cell apoptotic process","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"negative regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905586"}


id: GO:2000348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of CD40 signaling pathway","synonyms":[{"name":"regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000348"}


id: GO:2001236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of extrinsic apoptosis","type":"narrow"},{"name":"regulation of extrinsic apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001236"}


id: GO:0031231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the peroxisomal membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of peroxisomal membrane (obsolete GO:0031231)","synonyms":[{"name":"intrinsic to peroxisomal membrane","type":"narrow"}],"termid":"GO:0031231"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: PBO:0027835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septum_disassembly","termid":"PBO:0027835"}


id: GO:0032461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"positively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein oligomerization","synonyms":[{"name":"activation of protein oligomerization","type":"narrow"},{"name":"induction of protein oligomerization","type":"related"},{"name":"stimulation of protein oligomerization","type":"narrow"},{"name":"up regulation of protein oligomerization","type":"exact"},{"name":"up-regulation of protein oligomerization","type":"exact"},{"name":"upregulation of protein oligomerization","type":"exact"}],"termid":"GO:0032461"}


id: GO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II interferon receptor. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type II interferon receptor binding","synonyms":[{"name":"interferon-gamma","type":"narrow"},{"name":"interferon-gamma receptor binding","type":"exact"},{"name":"interferon-gamma receptor ligand","type":"narrow"}],"termid":"GO:0005133"}


id: PBO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_sulfide_level","termid":"PBO:0030288"}


id: GO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"musculoskeletal movement, spinal reflex action","termid":"GO:0050883"}


id: GO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for the ingestion of food by the cell into phagosomes.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cytostome","secondary_identifiers":["Wikipedia:Cytostome"],"termid":"GO:0031910"}


id: GO:1905179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:BHF_miRNA","PMID:23222520","GOC:BHF","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"down regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"down-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"downregulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"inhibition of cardiac muscle tissue regeneration","type":"narrow"}],"termid":"GO:1905179"}


id: GO:0047378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycerol + H2O = 1-alkyl-sn-glycerol + acetate + H+.","definition_xrefs":["EC:3.1.1.71","RHEA:11552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetylalkylglycerol acetylhydrolase activity","secondary_identifiers":["MetaCyc:3.1.1.71-RXN","KEGG_REACTION:R04043"],"synonyms":[{"name":"2-acetyl-1-alkyl-sn-glycerol acetylhydrolase activity","type":"related"},{"name":"alkylacetylglycerol acetylhydrolase activity","type":"related"}],"termid":"GO:0047378"}


id: GO:0033650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A semiautonomous, self replicating organelle as found in host cells that occurs in varying numbers, shapes, and sizes in the cell cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrion","synonyms":[{"name":"host mitochondria","type":"exact"}],"termid":"GO:0033650"}


id: PBO:0059221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 3, pseudogene","termid":"PBO:0059221"}


id: PBO:0056196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA6 divergent transcript","termid":"PBO:0056196"}


id: PBO:0068460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 36, pseudogene","termid":"PBO:0068460"}


id: PBO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 2 (predicted)","termid":"PBO:0002482"}


id: PBO:0079748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase L3","termid":"PBO:0079748"}


id: FYPO:0006950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of myo-inositol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular myo-inositol level","synonyms":[{"name":"increased cellular myo-inositol level during mitotic cell cycle","type":"related"},{"name":"increased cellular myo-inositol level during vegetative growth","type":"exact"},{"name":"increased myo-inositol accumulation","type":"related"}],"termid":"FYPO:0006950"}


id: PBO:0084094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for Cdc42p; required for polarity establishment and maintenance, and mutants have morphological defects in bud formation and shmooing; relocalizes from nucleus to cytoplasm upon DNA replication stress; thermosensitivity of the cdc24-4 mutant in the presence of sorbitol is functionally complemented by human CDC42","termid":"PBO:0084094"}


id: FYPO:0004251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is greater than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:20051983","PMID:24806966","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased DNA resection during replication fork processing","synonyms":[{"name":"increased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"increased DNA resectioning during replication fork processing","type":"exact"},{"name":"increased extent of DNA resection during replication fork processing","type":"exact"},{"name":"increased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0004251"}


id: PBO:0074993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-4","termid":"PBO:0074993"}


id: PBO:0058822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8052","termid":"PBO:0058822"}


id: GO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hypoxanthine + NAD+ + H2O = xanthine + NADH + H+.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hypoxanthine dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-9727347"],"synonyms":[{"name":"NAD-hypoxanthine dehydrogenase activity","type":"related"},{"name":"hypoxanthine oxidoreductase activity","type":"broad"},{"name":"hypoxanthine-NAD oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD(+) oxidoreductase activity","type":"related"},{"name":"hypoxanthine/NAD+ oxidoreductase activity","type":"related"},{"name":"hypoxanthine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0070674"}


id: PBO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 2","termid":"PBO:0045745"}


id: GO:0010665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell apoptotic process","termid":"GO:0010662"},{"relation_name":"regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010665"}


id: RO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"RO:0002018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","termid":"RO:0002017"}


id: PR:O13970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.10c","secondary_identifiers":["UniProtKB:O13970"],"synonyms":[{"name":"Spom972h-rpsB","type":"exact"}],"termid":"PR:O13970"}


id: GO:0106434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reactions involved in isomerization of all trans to all cis retnal.","definition_xrefs":["PMID:21447403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal metabolic process","termid":"GO:0042574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"retinal isomerization","termid":"GO:0106434"}


id: PBO:0004279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type","termid":"PBO:0004279"}


id: GO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a light-responsive receptor in the compound eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor development","synonyms":[{"name":"adult eye photoreceptor development","type":"narrow"}],"termid":"GO:0042051"}


id: PBO:0086018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086018"}


id: PBO:0049834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDHD5 antisense RNA 1","termid":"PBO:0049834"}


id: PBO:0045350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication fork stabilization factor DONSON","termid":"PBO:0045350"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_03764","SJAG_00747","SJAG_00924","SJAG_04954","SJAG_02903","SJAG_03656","SJAG_03774","SJAG_02102","SJAG_05219","SJAG_01950","SJAG_04821","SJAG_00437","SJAG_00394","SJAG_00334","SJAG_03056","SJAG_03311","SJAG_04952","SJAG_00831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86494,87231,90002,92526,94445,94498,94779,96087,96104,98396,99671,99871,101078,102796,105366,107161,108631,112810],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["GOC:jl","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide-lipid intermediate biosynthetic process","termid":"GO:0006490"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation","termid":"GO:0006487"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: PBO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 4","termid":"PBO:0061049"}


id: PBO:0058646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6775","termid":"PBO:0058646"}


id: PATO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature","termid":"PATO:0001701"}


id: PBO:0065796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 2","termid":"PBO:0065796"}


id: GO:0031386
data:
  {"annotated_genes":["SJAG_03843","SJAG_03849","SJAG_03971","SJAG_02253","SJAG_03616","SJAG_02891","SJAG_06309","SJAG_01226","SJAG_00615","SJAG_00452","SJAG_01365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84250,84251,84252,86209,87145,87146,87147,94742,94743,95896,95897,98967,104754,105316,105635,113256],"is_not":false,"summary":null,"term":"GO:0031386"}]},"cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another protein where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.","definition_xrefs":["GOC:dos","PMID:19028679","PMID:6305978","PMID:20054389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular tag activity","termid":"GO:0141047"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_02253":null,"SJAG_02891":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03849":null,"SJAG_03971":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein tag activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"protein tag","type":"exact"},{"name":"protein tagging activity","type":"related"},{"name":"ubiquitin","type":"related"},{"name":"ubiquitin-like protein modifier","type":"exact"}],"termid":"GO:0031386","terms_by_termid":{"GO:0031386":null}}


id: GO:1904800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron remodeling.","definition_xrefs":["GO_REF:0000058","PMID:21609829","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron maturation","termid":"GO:0014043"},{"relation_name":"is_a","term_name":"regulation of neuron remodeling","termid":"GO:1904799"},{"relation_name":"negatively_regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron remodeling","synonyms":[{"name":"down regulation of axon pruning","type":"narrow"},{"name":"down regulation of neuron remodeling","type":"exact"},{"name":"down regulation of neuronal remodeling","type":"exact"},{"name":"down-regulation of axon pruning","type":"narrow"},{"name":"down-regulation of neuron remodeling","type":"exact"},{"name":"down-regulation of neuronal remodeling","type":"exact"},{"name":"downregulation of axon pruning","type":"narrow"},{"name":"downregulation of neuron remodeling","type":"exact"},{"name":"downregulation of neuronal remodeling","type":"exact"},{"name":"inhibition of axon pruning","type":"narrow"},{"name":"inhibition of neuron remodeling","type":"narrow"},{"name":"inhibition of neuronal remodeling","type":"narrow"},{"name":"negative regulation of axon pruning","type":"narrow"},{"name":"negative regulation of neuron remodelling","type":"exact"},{"name":"negative regulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904800"}


id: PR:Q9Y7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing ATP-dependent RNA helicase prp28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.11","secondary_identifiers":["UniProtKB:Q9Y7T7"],"synonyms":[{"name":"Spom972h-DDX23","type":"exact"}],"termid":"PR:Q9Y7T7"}


id: PBO:0063817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family A member 2","termid":"PBO:0063817"}


id: GO:0099602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that directly (via physical interaction or direct modification) activates, inhibits or otherwise modulates the activity of a neurotransmitter receptor. Modulation of activity includes changes in desensitization rate, ligand affinity, ion selectivity and pore-opening/closing.","definition_xrefs":["GOC:dos","PMID:12740117","PMID:18387948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}


id: PBO:0051172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-60 (pseudogene)","termid":"PBO:0051172"}


id: PBO:0039031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene","termid":"PBO:0039031"}


id: GO:0090701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of a plant organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ formation","termid":"GO:1905393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ identity","termid":"GO:0090701"}


id: MOD:01942
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to D-aspartic acid.","definition_xrefs":["ChEBI:48094","RESID:AA0190","PubMed:9384562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01942"}


id: PBO:0070031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1328, pseudogene","termid":"PBO:0070031"}


id: GO:0048732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland development","termid":"GO:0048732"}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: PBO:0077425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B pseudogene 1","termid":"PBO:0077425"}


id: PBO:0081127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger homeobox 4","termid":"PBO:0081127"}


id: PBO:0031839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_morphology","termid":"PBO:0031839"}


id: PBO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (predicted)","termid":"PBO:0001707"}


id: PBO:0043016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule L1 like","termid":"PBO:0043016"}


id: GO:0042579
data:
  {"annotated_genes":["SJAG_01474","SJAG_00891","SJAG_04315","SJAG_02619","SJAG_02848","SJAG_00947","SJAG_01685","SJAG_03324","SJAG_02384","SJAG_00706","SJAG_03715","SJAG_02630","SJAG_00114","SJAG_02247","SJAG_03440","SJAG_00702","SJAG_00974","SJAG_02997","SJAG_02693","SJAG_03671","SJAG_03091","SJAG_04146","SJAG_02496","SJAG_01165","SJAG_04299","SJAG_04763","SJAG_03781","SJAG_00326","SJAG_04823","SJAG_01854","SJAG_03493","SJAG_04467","SJAG_03166"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101381,107907,110811,107924,111819,114325,86548],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005782"},{"annotations":[86345,113313,107465,93059,102764,110966,113363,91531,86540,107313,62853,101316,111820,107925,99184,84350,114210,97401],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005778"},{"annotations":[95936,110014,110138,112795,99185,105697,101188,93686,107926,96050,92692,98856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005777"}]},"cv_name":"cellular_component","definition":"Cytoplasmic organelles, spherical or oval in shape, that are bounded by a single membrane and contain oxidative enzymes, especially those utilizing hydrogen peroxide (H2O2).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01474":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02247":null,"SJAG_02384":null,"SJAG_02496":null,"SJAG_02619":null,"SJAG_02630":null,"SJAG_02693":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03091":null,"SJAG_03166":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03671":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04299":null,"SJAG_04315":null,"SJAG_04467":null,"SJAG_04763":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microbody"],"termid":"GO:0042579","terms_by_termid":{"GO:0005777":null,"GO:0005778":null,"GO:0005782":null}}


id: PBO:0018143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing Dbl1","termid":"PBO:0018143"}


id: PBO:0059238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11","termid":"PBO:0059238"}


id: PBO:0001798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (predicted)","termid":"PBO:0001798"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: PBO:0064178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XE, pseudogene","termid":"PBO:0064178"}


id: GO:0060812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which orthodenticle mRNA is transported to and maintained in the oocyte and/or syncytial embryo as part of the process that will specify the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"orthodenticle mRNA localization","synonyms":[{"name":"orthodenticle mRNA localisation","type":"exact"}],"termid":"GO:0060812"}


id: GO:0060560
data:
  {"annotated_genes":["SJAG_00244","SJAG_02392","SJAG_00514","SJAG_04509","SJAG_01017","SJAG_03581","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85991,91949,90683],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[84032,90123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[86841],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111114],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an anatomical structure that contributes to the structure attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental growth involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"differential growth","type":"exact"}],"termid":"GO:0060560","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: GO:0090068
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  {"annotated_genes":["SJAG_01311","SJAG_01000","SJAG_03592","SJAG_01401","SJAG_01188","SJAG_03438","SJAG_03695","SJAG_02723","SJAG_03342","SJAG_01805","SJAG_02336","SJAG_01801","SJAG_00845","SJAG_00514","SJAG_01456","SJAG_04259","SJAG_00666","SJAG_02342","SJAG_02451","SJAG_03486","SJAG_03720","SJAG_02392","SJAG_02380","SJAG_04140","SJAG_02074","SJAG_02498","SJAG_03936","SJAG_00082","SJAG_01825","SJAG_03631","SJAG_03681","SJAG_01297","SJAG_02592","SJAG_00364","SJAG_01901","SJAG_04666","SJAG_03353","SJAG_04573","SJAG_03309","SJAG_03591","SJAG_01837","SJAG_00823","SJAG_01787","SJAG_02838","SJAG_00256","SJAG_00883","SJAG_03501","SJAG_03602","SJAG_03704","SJAG_04853","SJAG_03160","SJAG_04486","SJAG_04771","SJAG_00100","SJAG_04776","SJAG_03048","SJAG_01679","SJAG_04332","SJAG_04280","SJAG_03067","SJAG_00214","SJAG_03581","SJAG_04468","SJAG_03699","SJAG_03350","SJAG_03126","SJAG_00145","SJAG_01210","SJAG_04597","SJAG_01114","SJAG_00216","SJAG_02169","SJAG_00117","SJAG_04968","SJAG_03624","SJAG_02404","SJAG_00266","SJAG_02332","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[109857,110338,99992,86838,108035,111966,104333,103311,95682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[98387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[108036,101255,112076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[112555,114268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140648"},{"annotations":[108113,113333,99422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[86119,89855,98472,108037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[101888,113131,97718,102042,102731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[89906,94535,87834,103314,107276,90516,104652,106419,88237,84189,90647,97854,90477,112745,95095,112556,99590,92429,84198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[97480,83995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[90648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[102694,112305,85190,98473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[109862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[104436,98476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[91264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[90517,86120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[83674,106600,109436,90518,90686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[98477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[112747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[112748,98478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[103488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"},{"annotations":[89907,86121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903490"},{"annotations":[115244,99802,86885,91957,106844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[101256,103125,102456,85996,89908,113938,85364,109437,111530,88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[110339,98205,107450,89909,96235,110836,93801,98479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[112749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[89910,86122,107277,98480,112750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[95704,93802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[90519,86123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[90521,83675,88518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[85191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[83657,88519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[106601,83676,86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process that increases the rate, frequency or extent of a cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"positively_regulates","term_name":"cell cycle 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regulation of cell cycle process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"termid":"GO:0090068","terms_by_termid":{"GO:0007089":null,"GO:0010845":null,"GO:0010846":null,"GO:0010971":null,"GO:0031031":null,"GO:0031536":null,"GO:0032215":null,"GO:0045842":null,"GO:0075296":null,"GO:0090267":null,"GO:0110032":null,"GO:0110161":null,"GO:0140281":null,"GO:0140429":null,"GO:0140499":null,"GO:0140648":null,"GO:0140748":null,"GO:1900087":null,"GO:1901970":null,"GO:1902425":null,"GO:1902426":null,"GO:1902846":null,"GO:1903024":null,"GO:1903380":null,"GO:1903465":null,"GO:1903468":null,"GO:1903473":null,"GO:1903490":null,"GO:1903501":null,"GO:1903617":null,"GO:1904514":null,"GO:1905191":null,"GO:1905263":null,"GO:1905287":null,"GO:1905326":null,"GO:1905406":null,"GO:1905758":null,"GO:1905824":null}}


id: PBO:0078785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-2","termid":"PBO:0078785"}


id: FYPO:0007187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any heme measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular heme level","synonyms":[{"name":"decreased cellular haem level","type":"exact"},{"name":"decreased cellular heme level during mitotic cell cycle","type":"related"},{"name":"decreased cellular heme level during vegetative growth","type":"exact"},{"name":"reduced cellular heme level","type":"exact"}],"termid":"FYPO:0007187"}


id: PBO:0054231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1613","termid":"PBO:0054231"}


id: PBO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein protein Pof1","termid":"PBO:0000932"}


id: PBO:0042846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP53 pseudogene 1","termid":"PBO:0042846"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"NAD+ ADP-ribosyltransferase activity","secondary_identifiers":["MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-5651723","Reactome:R-HSA-5688276","Reactome:R-HSA-8938073","Reactome:R-HSA-5687653","Reactome:R-HSA-3640858","Reactome:R-HSA-8948800","Reactome:R-HSA-9729279","Reactome:R-HSA-9686061","Reactome:R-HSA-2187325"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: PATO:0002029
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased osmolality","synonyms":[{"name":"high osmolality","type":"exact"}],"termid":"PATO:0002029"}


id: GO:1990478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultrasonic stimulus.","definition_xrefs":["PMID:20950932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ultrasound","termid":"GO:1990478"}


id: GO:0170046
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  {"annotated_genes":["SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96337],"is_not":false,"summary":null,"term":"GO:0170046"}]},"cv_name":"biological_process","definition":"The process in which isopentenyl pyrophosphate is transported across a membrane into the mitochondrion.","definition_xrefs":["GOC:ew","PMID:37813972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"isopentenyl pyrophosphate import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170046","terms_by_termid":{"GO:0170046":null}}


id: PBO:0073736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A3 antisense RNA 1","termid":"PBO:0073736"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: GO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate.","definition_xrefs":["PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-glutamine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["EC:2.6.1.50"],"synonyms":[{"name":"L-glutamine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080100"}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: PBO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ISCA1 orholog","termid":"PBO:0010081"}


id: PBO:0088795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1","termid":"PBO:0088795"}


id: PBO:0046032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta","termid":"PBO:0046032"}


id: GO:0046505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sulfolipids, any compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.","definition_xrefs":["PMID:9751667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sulfolipid metabolic process","synonyms":[{"name":"sulfolipid metabolism","type":"exact"},{"name":"sulpholipid metabolic process","type":"exact"},{"name":"sulpholipid metabolism","type":"exact"}],"termid":"GO:0046505"}


id: PBO:0038756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 1","termid":"PBO:0038756"}


id: GO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kappa-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"kappa-type opioid receptor binding","synonyms":[{"name":"dynorphin receptor binding","type":"related"},{"name":"kappa-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031851"}


id: PBO:0066123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 3","termid":"PBO:0066123"}


id: PBO:0059985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 5","termid":"PBO:0059985"}


id: PBO:0084028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi-localized protein with homology to gamma-adaptin; interacts with and regulates Arf1p and Arf2p in a GTP-dependent manner in order to facilitate traffic through the late Golgi; GGA1 has a paralog, GGA2, that arose from the whole genome duplication","termid":"PBO:0084028"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: PBO:0036364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate transmembrane transporter (predicted)","termid":"PBO:0036364"}


id: GO:0007519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental sequence of events leading to the formation of adult skeletal muscle tissue. The main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue development","secondary_identifiers":["GO:0048637"],"synonyms":[{"name":"myogenesis","type":"related"}],"termid":"GO:0007519"}


id: GO:0046502
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving uroporphyrinogen III, a precursor for synthesis of vitamin B12, chlorophyll, and heme in organisms that produce these compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0033013"],"is_obsolete":false,"name":"uroporphyrinogen III metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uroporphyrinogen III metabolism","type":"exact"}],"termid":"GO:0046502","terms_by_termid":{"GO:0006780":null}}


id: PR:Q9HDX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A11.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AB hydrolase superfamily protein B1A11.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.02","synonyms":[{"name":"Spom972h-SPAPB1A11.02","type":"exact"}],"termid":"PR:Q9HDX3"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["PMID:16391231","GOC:mah","PMID:15485915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: GO:1901411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glutamate","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901411"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: GO:0022608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a multicellular organism to a substrate or other organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism adhesion","termid":"GO:0022608"}


id: PBO:0036458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA binding protein involved in CCR4-NOT dependent deadenylation (predicted)","termid":"PBO:0036458"}


id: PBO:0030890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_response_phenotype_during_vegetative_growth","termid":"PBO:0030890"}


id: PBO:0056506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose binding lectin 1, pseudogene","termid":"PBO:0056506"}


id: GO:0052724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 3-diphospho-1D-myo-inositol (1,2,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol hexakisphosphate 3-kinase activity","secondary_identifiers":["EC:2.7.4.21","MetaCyc:RXN-10971"],"termid":"GO:0052724"}


id: PBO:0034032
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_message_for_curators","termid":"PBO:0034032"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: PBO:0066468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5","termid":"PBO:0066468"}


id: PBO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: PBO:0002749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic acid transport protein Mae1","termid":"PBO:0002749"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: PBO:0068622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 2","termid":"PBO:0068622"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: PATO:0001880
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a tail or tail-like projection.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudate","synonyms":[{"name":"caudal","type":"exact"},{"name":"tailed","type":"related"}],"termid":"PATO:0001880"}


id: FYPO:0004994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis I","synonyms":[{"name":"delayed meiosis I","type":"exact"},{"name":"delayed onset of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004994"}


id: GO:0047520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 11-cis-retinyl palmitate + H2O = 11-cis-retinol + H+ + palmitate.","definition_xrefs":["EC:3.1.1.63","RHEA:19697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"11-cis-retinyl-palmitate hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2465941","MetaCyc:11-CIS-RETINYL-PALMITATE-HYDROLASE-RXN","KEGG_REACTION:R03049"],"synonyms":[{"name":"11-cis-retinol palmitate esterase activity","type":"related"},{"name":"11-cis-retinyl-palmitate acylhydrolase activity","type":"related"},{"name":"RPH","type":"related"}],"termid":"GO:0047520"}


id: SO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of sequence from the HERV family of mobile elements with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_insertion","termid":"SO:0001837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_insertion","synonyms":[{"name":"HERV insertion","type":"exact"}],"termid":"SO:0002187"}


id: PBO:0079158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 17","termid":"PBO:0079158"}


id: GO:1990942
data:
  {"annotated_genes":["SJAG_02336","SJAG_01613","SJAG_01297","SJAG_01224","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90303,94722,95325,99995,104338],"is_not":false,"summary":null,"term":"GO:1990942"}]},"cv_name":"biological_process","definition":"A mechanism to recapture 'lost' chromosomes (chromosomes which have become detached from the spindle) during metaphase of mitotic chromosome segregation. Chromosomes with unattached kinetochores are migrated along (non polar) spindle microtubules to the mitotic spindle pole body by a combination of microtubule depolymerisation and 'kinetochore sliding' (migration of the chromosome along the microtubule). The chromosome subsequently migrates along the polar spindle microtubule to the metaphase plate.","definition_xrefs":["PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of chromosome localization","termid":"GO:0051303"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02336":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic metaphase chromosome recapture","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905185"],"synonyms":[{"name":"kinetochore retrieval","type":"exact"},{"name":"metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in kinetochore retrieval","type":"exact"},{"name":"microtubule sliding involved in metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"microtubule sliding involved in mitotic metaphase chromosome recapture","type":"related"},{"name":"microtubule sliding involved in sister kinetochore recapture","type":"exact"},{"name":"sister kinetochore recapture","type":"exact"}],"termid":"GO:1990942","terms_by_termid":{"GO:1990942":null}}


id: PBO:0045822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 12","termid":"PBO:0045822"}


id: GO:0097098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An activity that facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops.","definition_xrefs":["PMID:21699496","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA hybrid binding","termid":"GO:0071667"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA/RNA hybrid annealing activity","termid":"GO:0097098"}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: FYPO:0005724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased protein methyltransferase activity","termid":"FYPO:0005724"}


id: GO:0043605
data:
  {"annotated_genes":["SJAG_02766","SJAG_05287","SJAG_00035","SJAG_04679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88557,87875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000256"},{"annotations":[87553,115028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043419"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_02766":null,"SJAG_04679":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular amide catabolic process","type":"exact"}],"termid":"GO:0043605","terms_by_termid":{"GO:0000256":null,"GO:0043419":null}}


id: PATO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated green","synonyms":[{"name":"bright green","type":"related"}],"termid":"PATO:0001271"}


id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: PBO:0030765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0030765"}


id: FYPO:0002148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of abnormal morphology (i.e. size, shape, or structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, abnormal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, abnormal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, abnormal morphology","type":"exact"}],"termid":"FYPO:0002148"}


id: FYPO:0006610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of longer duration than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"increased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"increased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006610"}


id: PBO:0055467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2900","termid":"PBO:0055467"}


id: GO:0031761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a fMet-Leu-Phe receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"fMet-Leu-Phe receptor binding","synonyms":[{"name":"N-formyl peptide receptor binding","type":"exact"},{"name":"fMet-Leu-Phe receptor ligand","type":"narrow"}],"termid":"GO:0031761"}


id: GO:1902584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GOC:TermGenie","PMID:24198318","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"positively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to water deprivation","synonyms":[{"name":"activation of drought tolerance","type":"related"},{"name":"activation of response to dehydration","type":"narrow"},{"name":"activation of response to drought","type":"narrow"},{"name":"activation of response to thirst","type":"narrow"},{"name":"activation of response to water deprivation","type":"narrow"},{"name":"positive regulation of drought tolerance","type":"related"},{"name":"positive regulation of response to dehydration","type":"exact"},{"name":"positive regulation of response to drought","type":"exact"},{"name":"positive regulation of response to thirst","type":"exact"},{"name":"up regulation of drought tolerance","type":"related"},{"name":"up regulation of response to dehydration","type":"exact"},{"name":"up regulation of response to drought","type":"exact"},{"name":"up regulation of response to thirst","type":"exact"},{"name":"up regulation of response to water deprivation","type":"exact"},{"name":"up-regulation of drought tolerance","type":"related"},{"name":"up-regulation of response to dehydration","type":"exact"},{"name":"up-regulation of response to drought","type":"exact"},{"name":"up-regulation of response to thirst","type":"exact"},{"name":"up-regulation of response to water deprivation","type":"exact"},{"name":"upregulation of drought tolerance","type":"related"},{"name":"upregulation of response to dehydration","type":"exact"},{"name":"upregulation of response to drought","type":"exact"},{"name":"upregulation of response to thirst","type":"exact"},{"name":"upregulation of response to water deprivation","type":"exact"}],"termid":"GO:1902584"}


id: PBO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0B","termid":"PBO:0002328"}


id: SO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing or overlapping no genes that is bounded on either side by a gene, or bounded by a gene and the end of the chromosome.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Intergenic_region"],"synonyms":[{"name":"intergenic region","type":"exact"}],"termid":"SO:0000605"}


id: GO:0000172
data:
  {"annotated_genes":["SJAG_00955","SJAG_03425","SJAG_01551","SJAG_02547","SJAG_03796","SJAG_06613","SJAG_03234","SJAG_01369","SJAG_03952","SJAG_01623","SJAG_02553","SJAG_04916","SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87193,90810,92600,92891,95584,100635,100853,101731,101732,109560,111368,111453,114632],"is_not":false,"summary":null,"term":"GO:0000172"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains an RNA molecule of the snoRNA family, and cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication.","definition_xrefs":["GOC:sgd_curators","PMID:7510714","PMID:10690410","PMID:14729943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA-containing ribonucleoprotein complex","termid":"GO:0005732"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00955":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ribonuclease MRP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase MRP complex","type":"exact"},{"name":"ribonuclease mitochondrial RNA processing complex","type":"exact"}],"termid":"GO:0000172","terms_by_termid":{"GO:0000172":null}}


id: PBO:0003121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase (predicted)","termid":"PBO:0003121"}


id: PBO:0040710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 15","termid":"PBO:0040710"}


id: GO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VIII alpha chains; [alpha1(VIII)2]alpha2(VIII) and alpha1(VIII)[alpha2(VIII)]2 trimers have been observed; type VIII collagen triple helices associate to form regular hexagonal nets.","definition_xrefs":["PMID:21421911","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain collagen trimer","termid":"GO:0005598"},{"relation_name":"is_a","term_name":"sheet-forming collagen trimer","termid":"GO:0030935"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type VIII trimer","termid":"GO:0005591"}


id: GO:0002951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction leukotriene C(4) + H2O= leukotriene D(4) + L-glutamate.","definition_xrefs":["PMID:9774450","RHEA:31563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0008233","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"leukotriene-C(4) hydrolase","secondary_identifiers":["EC:3.4.19.14"],"termid":"GO:0002951"}


id: GO:0008734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + O2 = iminosuccinate + H2O2. Can also use fumatate as electron acceptor under anaerobic conditions, yielding succinate.","definition_xrefs":["EC:1.4.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-aspartate oxidase activity","synonyms":[{"name":"L-aspartate:oxygen oxidoreductase","type":"related"}],"termid":"GO:0008734"}


id: PBO:0030086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glutathione","termid":"PBO:0030086"}


id: PBO:0029256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_S_phase","termid":"PBO:0029256"}


id: PBO:0028326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028326"}


id: PBO:0078795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-2","termid":"PBO:0078795"}


id: PBO:0086709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; mRNA expression appears to be regulated by SUT1 and UPC2","termid":"PBO:0086709"}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:12651739","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: PBO:0083704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER integral membrane protein, ERMES complex subunit; ERMES links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0083704"}


id: GO:0015263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amine/amide/polyamine channel activity (obsolete GO:0015263)","synonyms":[{"name":"amine/amide/polyamine channel activity","type":"exact"}],"termid":"GO:0015263"}


id: PBO:0070127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 41 pseudogene","termid":"PBO:0070127"}


id: FYPO:0005236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21945095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at stalled replication fork","synonyms":[{"name":"normal protein localisation to chromatin at stalled replication fork","type":"exact"},{"name":"normal protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0005236"}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: GO:1903767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of sweet taste receptor activity.","definition_xrefs":["GOC:TermGenie","PMID:16720576","GO_REF:0000088","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor complex","termid":"GO:1903768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sweet taste receptor complex","termid":"GO:1903767"}


id: GO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"negatively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-22 production","secondary_identifiers":["GO:0045394"],"synonyms":[{"name":"down regulation of interleukin-22 production","type":"exact"},{"name":"down-regulation of interleukin-22 production","type":"exact"},{"name":"downregulation of interleukin-22 production","type":"exact"},{"name":"inhibition of interleukin-22 production","type":"narrow"},{"name":"negative regulation of IL-22 production","type":"exact"},{"name":"negative regulation of interleukin-22 biosynthetic process","type":"narrow"}],"termid":"GO:0032706"}


id: GO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell apoptotic process","synonyms":[{"name":"activation of glial cell apoptosis","type":"narrow"},{"name":"positive regulation of glial cell apoptosis","type":"narrow"},{"name":"stimulation of glial cell apoptosis","type":"narrow"},{"name":"up regulation of glial cell apoptosis","type":"exact"},{"name":"up-regulation of glial cell apoptosis","type":"exact"},{"name":"upregulation of glial cell apoptosis","type":"exact"}],"termid":"GO:0034352"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: GO:1901904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrocidine.","definition_xrefs":["PMID:9352938","GOC:yaf","GOC:TermGenie","UniPathway:UPA00180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"tyrocidine metabolic process","termid":"GO:1901902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyrocidine biosynthetic process","synonyms":[{"name":"tyrocidine anabolism","type":"exact"},{"name":"tyrocidine biosynthesis","type":"exact"},{"name":"tyrocidine formation","type":"exact"},{"name":"tyrocidine synthesis","type":"exact"}],"termid":"GO:1901904"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["EC:4.3.2.4","MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0009975","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


id: GO:0046403
data:
  {"annotated_genes":["SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89806],"is_not":false,"summary":null,"term":"GO:0046403"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'end (2'-deoxyribonucleotide 3'-phosphate)-DNA + H2O = a 3'-end 2'-deoxyribonucleotide-DNA + phosphate.","definition_xrefs":["RHEA:14113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"polynucleotide 3'-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.3.32","MetaCyc:POLYNUCLEOTIDE-3-PHOSPHATASE-RXN","Reactome:R-HSA-5649705"],"synonyms":[{"name":"2'(3')-polynucleotidase activity","type":"related"},{"name":"5'-polynucleotidekinase 3'-phosphatase activity","type":"related"},{"name":"DNA 3'-phosphatase activity","type":"related"},{"name":"deoxyribonucleate 3'-phosphatase activity","type":"related"},{"name":"polynucleotide 3'-phosphohydrolase activity","type":"related"}],"termid":"GO:0046403","terms_by_termid":{"GO:0046403":null}}


id: GO:2000551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell cytokine production","termid":"GO:0002724"},{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000551"}


id: PBO:0048273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT9 antisense RNA 1","termid":"PBO:0048273"}


id: PBO:0078706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-1","termid":"PBO:0078706"}


id: GO:0097416
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic inclusion found in neurons. It consists of filaments and granular materials, exhibits a dense core with a rough peripheral halo and lacks a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments.","definition_xrefs":["PMID:18026741","NIF_Subcellular:nlx_subcell_20090105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body-like hyaline inclusion","synonyms":[{"name":"LBHI","type":"exact"}],"termid":"GO:0097416"}


id: GO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichyl diphosphate, a diphosphorylated dolichol derivative. In eukaryotes, these function as carriers of mono- and oligosaccharide residues in the glycosylation of lipids and proteins within intracellular membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dolichyl diphosphate metabolic process","synonyms":[{"name":"dolichyl diphosphate metabolism","type":"exact"}],"termid":"GO:0046465"}


id: GO:1904629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["PMID:19765580","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diterpene","termid":"GO:1904629"}


id: GO:0015911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell, across the plasma membrane and into the cytosol. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"fatty acid transmembrane transport","termid":"GO:1902001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"long-chain fatty acid import across plasma membrane","synonyms":[{"name":"plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0015911"}


id: GO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the 14 parasegments of the embryo into anterior and posterior compartments; exemplified by the actions of the segment polarity gene products.","definition_xrefs":["ISBN:0632030488","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segment polarity determination","termid":"GO:0007367"}


id: GO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate determination","termid":"GO:0043703"}


id: PBO:0109316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair WLM domain metallopeptidase Wss1","termid":"PBO:0109316"}


id: PBO:0065404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 6","termid":"PBO:0065404"}


id: PBO:0081821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 738","termid":"PBO:0081821"}


id: FYPO:0003594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal anaphase-promoting complex-dependent protein catabolic process","synonyms":[{"name":"normal anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex-dependent protein catabolic process during vegetative growth","type":"exact"},{"name":"normal anaphase-promoting complex-dependent protein degradation","type":"exact"}],"termid":"FYPO:0003594"}


id: PBO:0087183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A43","termid":"PBO:0087183"}


id: GO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"negative regulation of axonogenesis","termid":"GO:0050771"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting","synonyms":[{"name":"down regulation of collateral sprouting","type":"exact"},{"name":"down-regulation of collateral sprouting","type":"exact"},{"name":"downregulation of collateral sprouting","type":"exact"},{"name":"inhibition of collateral sprouting","type":"narrow"}],"termid":"GO:0048671"}


id: PBO:0069868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1155, pseudogene","termid":"PBO:0069868"}


id: PBO:0027013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_molecular_function","termid":"PBO:0027013"}


id: FYPO:0001527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GTP binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal GTP binding","termid":"FYPO:0001527"}


id: GO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of juvenile hormone metabolic process","termid":"GO:0045928"},{"relation_name":"is_a","term_name":"regulation of juvenile hormone catabolic process","termid":"GO:0045952"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone catabolic process","synonyms":[{"name":"down regulation of juvenile hormone catabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone catabolic process","type":"exact"},{"name":"downregulation of juvenile hormone catabolic process","type":"exact"},{"name":"inhibition of juvenile hormone catabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone breakdown","type":"exact"},{"name":"negative regulation of juvenile hormone catabolism","type":"exact"},{"name":"negative regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045970"}


id: GO:0033847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + hydrogen sulfide = L-cysteine + phosphate.","definition_xrefs":["EC:2.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-phosphoserine sulfhydrylase activity","secondary_identifiers":["MetaCyc:2.5.1.65-RXN","RHEA:10252"],"synonyms":[{"name":"O-phospho-L-serine:hydrogen-sulfide 2-amino-2-carboxyethyltransferase activity","type":"related"},{"name":"O-phosphoserine(thiol)-lyase activity","type":"related"}],"termid":"GO:0033847"}


id: SO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from plasmid sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"plasmid_location","termid":"SO:0000749"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid_gene","synonyms":[{"name":"plasmid gene","type":"exact"}],"termid":"SO:0000098"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: PBO:0045293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 45","termid":"PBO:0045293"}


id: PR:O94480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.13c gene.","definition_xrefs":["UniProtKB:O94480","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (uridine-N(3))-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.13c","synonyms":[{"name":"Spom972h-SPCC1919.13c","type":"exact"}],"termid":"PR:O94480"}


id: GO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by lymphocytes expressing specific receptors for antigen produced through a somatic diversification process that includes somatic recombination of variable lymphocyte receptors (VLR) incorporating leucine-rich repeat (LRR) domains, and allowing for enhanced responses upon subsequent exposures to the same antigen (immunological memory). Examples of this process are found in jawless fish, including the lampreys (Petromyzontidae) and hagfishes (Myxinidae).","definition_xrefs":["PMID:16373579","GOC:mtg_sensu","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune response based on somatic recombination of immune receptors built from leucine-rich repeat domains","synonyms":[{"name":"adaptive immune response based on somatic recombination of VLR built from LRR domains","type":"exact"},{"name":"adaptive immune response based on somatic recombination of variable lymphocyte receptors built from leucine-rich repeat domains","type":"exact"},{"name":"adaptive immune response in jawless fish","type":"exact"}],"termid":"GO:0002459"}


id: GO:0016711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavonoid + NADPH + H+ + O2 = 3'-hydroxyflavonoid + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"flavonoid 3'-monooxygenase activity","secondary_identifiers":["RHEA:16337","MetaCyc:FLAVONOID-3-MONOOXYGENASE-RXN"],"synonyms":[{"name":"NADPH:flavonoid-3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3'-hydroxylase activity","type":"related"},{"name":"flavonoid 3-hydroxylase","type":"related"},{"name":"flavonoid 3-monooxygenase","type":"related"},{"name":"flavonoid,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"}],"termid":"GO:0016711"}


id: PR:O60114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dhx29 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C15C4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.05","synonyms":[{"name":"Spom972h-dhx29","type":"exact"}],"termid":"PR:O60114"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GOC:rph","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: GO:0035226
data:
  {"annotated_genes":["SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66805],"is_not":false,"summary":null,"term":"GO:0035226"}]},"cv_name":"molecular_function","definition":"Binding to the catalytic subunit of glutamate-cysteine ligase.","definition_xrefs":["PMID:12954617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glutamate-cysteine ligase catalytic subunit binding","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0035226","terms_by_termid":{"GO:0035226":null}}


id: GO:1900286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of cellotriose transport","termid":"GO:1900285"},{"relation_name":"negatively_regulates","term_name":"cellotriose transport","termid":"GO:2001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellotriose transport","synonyms":[{"name":"down regulation of cellotriose transport","type":"exact"},{"name":"down-regulation of cellotriose transport","type":"exact"},{"name":"downregulation of cellotriose transport","type":"exact"},{"name":"inhibition of cellotriose transport","type":"narrow"}],"termid":"GO:1900286"}


id: GO:0014729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates velocity of shortening of a skeletal muscle contraction. The shortening leads to reduction of the length of muscle fibers and sarcomeres.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the velocity of shortening of skeletal muscle modulating contraction","synonyms":[{"name":"regulation of the velocity of shortening of skeletal muscle during contraction","type":"related"}],"termid":"GO:0014729"}


id: PBO:0041196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog","termid":"PBO:0041196"}


id: PBO:0060678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dependent diflavin oxidoreductase 1","termid":"PBO:0060678"}


id: GO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the pronephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in pronephros development","synonyms":[{"name":"cell differentiation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039014"}


id: PBO:0004907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase (predicted)","termid":"PBO:0004907"}


id: PBO:0084389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity vacuolar phosphate transporter; exports phosphate from the vacuolar lumen to the cytosol; regulates phosphate and polyphosphate metabolism; acts upstream of Pho81p in regulation of the PHO pathway; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); deletion of pho84, pho87, pho89, pho90, and pho91 causes synthetic lethality; transcription independent of Pi and Pho4p activity; overexpression results in vigorous growth","termid":"PBO:0084389"}


id: PBO:0015220
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homooligomeric","termid":"PBO:0015220"}


id: GO:0005886
data:
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id: GO:0090562
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id: PBO:0067927
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id: PBO:0065025
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id: PBO:0055866
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id: GO:0008162
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id: GO:0140592
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id: GO:1902185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of shoot apical meristem development","termid":"GO:1902183"},{"relation_name":"positively_regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shoot apical meristem development","synonyms":[{"name":"activation of SAM development","type":"exact"},{"name":"activation of primary shoot meristem development","type":"related"},{"name":"activation of promeristem development","type":"broad"},{"name":"activation of shoot apical meristem development","type":"narrow"},{"name":"positive regulation of SAM development","type":"exact"},{"name":"positive regulation of primary shoot meristem development","type":"related"},{"name":"positive regulation of promeristem development","type":"broad"},{"name":"up regulation of SAM development","type":"exact"},{"name":"up regulation of primary shoot meristem development","type":"related"},{"name":"up regulation of promeristem development","type":"broad"},{"name":"up regulation of shoot apical meristem development","type":"exact"},{"name":"up-regulation of SAM development","type":"exact"},{"name":"up-regulation of primary shoot meristem development","type":"related"},{"name":"up-regulation of promeristem development","type":"broad"},{"name":"up-regulation of shoot apical meristem development","type":"exact"},{"name":"upregulation of SAM development","type":"exact"},{"name":"upregulation of primary shoot meristem development","type":"related"},{"name":"upregulation of promeristem development","type":"broad"},{"name":"upregulation of shoot apical meristem development","type":"exact"}],"termid":"GO:1902185"}


id: FYPO:0001908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased pre-mRNA level","synonyms":[{"name":"accumulation of pre-mRNA transcripts","type":"related"},{"name":"increased pre-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0001908"}


id: PBO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family","termid":"PBO:0000111"}


id: PBO:0029692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology,_single_irregular_mass","termid":"PBO:0029692"}


id: MOD:01130
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SucPhencarb Lysyl","termid":"MOD:01130"}


id: PBO:0086730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene YPT6; deletion causes a vacuolar protein sorting defect; decreased levels of protein in enolase deficient mutant","termid":"PBO:0086730"}


id: PBO:0011091
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after cerevisiae","termid":"PBO:0011091"}


id: GO:0010272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silver ion stimulus.","definition_xrefs":["PMID:16367966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to silver ion","termid":"GO:0010272"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: PBO:0073625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC10 antisense RNA 1","termid":"PBO:0073625"}


id: PBO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal fragment of Rec8 generated by separase-mediated cleavage is an endogenous substrate of the N-end rule pathway","termid":"PBO:0015687"}


id: GO:2000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular visceral epithelial cell development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"metanephric podocyte development","termid":"GO:0072249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric podocyte development","synonyms":[{"name":"regulation of metanephric glomerular visceral epithelial cell development","type":"exact"}],"termid":"GO:2000477"}


id: PR:Q9UQX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Mn], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11404:SF5","PRO:DNx","OMA:SCHPO01332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Mn], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.01","secondary_identifiers":["UniProtKB:Q9UQX0"],"synonyms":[{"name":"Spom972h-SOD2","type":"exact"}],"termid":"PR:Q9UQX0"}


id: GO:0052462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont phagocytosis (obsolete GO:0052462)","termid":"GO:0052462"}


id: PBO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 2","termid":"PBO:0061552"}


id: GO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germinal center formation","termid":"GO:0002634"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of germinal center formation","synonyms":[{"name":"activation of germinal center formation","type":"narrow"},{"name":"stimulation of germinal center formation","type":"narrow"},{"name":"up regulation of germinal center formation","type":"exact"},{"name":"up-regulation of germinal center formation","type":"exact"},{"name":"upregulation of germinal center formation","type":"exact"}],"termid":"GO:0002636"}


id: PBO:0046028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit epsilon","termid":"PBO:0046028"}


id: GO:0043455
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary metabolism, the chemical reactions and pathways involving compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of secondary metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of secondary metabolism","type":"exact"}],"termid":"GO:0043455","terms_by_termid":{"GO:1905569":null}}


id: PBO:0012062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of Ofd1, Nro1","termid":"PBO:0012062"}


id: GO:2000403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"positively_regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte migration","termid":"GO:2000403"}


id: GO:0099048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense response of that serves to clear host cells of foreign DNA and RNA. It has three distinct stage: acquisition of foreign DNA by integration into CRISPR loci in the host chromosome, CRISPR RNA (crRNA) biogenesis, and target interference. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeat, which describes the nature of the loci.","definition_xrefs":["PMID:29440578","PMID:23495939","PMID:27302758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CRISPR-cas system","termid":"GO:0099048"}


id: SO:1000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a guanine to an adenine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_A_transition","synonyms":[{"name":"G to A transition","type":"exact"}],"termid":"SO:1000016"}


id: PR:Q9HGM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.05c gene.","definition_xrefs":["UniProtKB:Q9HGM6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter C543.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.05c","synonyms":[{"name":"Spom972h-SPBC543.05c","type":"exact"}],"termid":"PR:Q9HGM6"}


id: GO:0019682
data:
  {"annotated_genes":["SJAG_04192","SJAG_00501","SJAG_04263","SJAG_03934","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[92465,104506,85073,109889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009052"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_03934":null,"SJAG_04192":null,"SJAG_04263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate metabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate metabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate metabolism","type":"exact"}],"termid":"GO:0019682","terms_by_termid":{"GO:0009052":null,"GO:0046166":null}}


id: GO:1900684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumonisin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of fumonisin biosynthetic process","termid":"GO:1900683"},{"relation_name":"negatively_regulates","term_name":"fumonisin biosynthetic process","termid":"GO:1900541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumonisin biosynthetic process","synonyms":[{"name":"down regulation of fumonisin anabolism","type":"exact"},{"name":"down regulation of fumonisin biosynthesis","type":"exact"},{"name":"down regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down regulation of fumonisin formation","type":"exact"},{"name":"down regulation of fumonisin synthesis","type":"exact"},{"name":"down-regulation of fumonisin anabolism","type":"exact"},{"name":"down-regulation of fumonisin biosynthesis","type":"exact"},{"name":"down-regulation of fumonisin biosynthetic process","type":"exact"},{"name":"down-regulation of fumonisin formation","type":"exact"},{"name":"down-regulation of fumonisin synthesis","type":"exact"},{"name":"downregulation of fumonisin anabolism","type":"exact"},{"name":"downregulation of fumonisin biosynthesis","type":"exact"},{"name":"downregulation of fumonisin biosynthetic process","type":"exact"},{"name":"downregulation of fumonisin formation","type":"exact"},{"name":"downregulation of fumonisin synthesis","type":"exact"},{"name":"inhibition of fumonisin anabolism","type":"exact"},{"name":"inhibition of fumonisin biosynthesis","type":"exact"},{"name":"inhibition of fumonisin biosynthetic process","type":"narrow"},{"name":"inhibition of fumonisin formation","type":"exact"},{"name":"inhibition of fumonisin synthesis","type":"exact"},{"name":"negative regulation of fumonisin anabolism","type":"exact"},{"name":"negative regulation of fumonisin biosynthesis","type":"exact"},{"name":"negative regulation of fumonisin formation","type":"exact"},{"name":"negative regulation of fumonisin synthesis","type":"exact"}],"termid":"GO:1900684"}


id: FYPO:0002648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during prometaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic prometaphase","synonyms":[{"name":"increased protein phosphorylation during mitotic prometaphase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0002648"}


id: PBO:0084686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial citrate synthase; catalyzes condensation of acetyl coenzyme A and oxaloacetate to form citrate, which is the first and rate-limiting step of the TCA cycle; transcription subject to glucose repression; CIT1 has a paralog, CIT2, that arose from the whole genome duplication","termid":"PBO:0084686"}


id: GO:0009413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating flooding, short-term immersion in water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flooding","termid":"GO:0009413"}


id: GO:0036065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a fucosyl group to an acceptor molecule.","definition_xrefs":["GOC:sart","PMID:19948734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fucosylation","termid":"GO:0036065"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: FYPO:0005235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is abolished.","definition_xrefs":["PomBase:mah","PMID:21945095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at stalled replication fork","synonyms":[{"name":"abolished protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at stalled replication fork during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005235"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: PBO:0064662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4E","termid":"PBO:0064662"}


id: PBO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase (predicted)","termid":"PBO:0003323"}


id: PATO:0025000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being fit to be used as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potability","synonyms":[{"name":"drinkability","type":"exact"}],"termid":"PATO:0025000"}


id: PBO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule","termid":"PBO:0042317"}


id: PBO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex (predicted)","termid":"PBO:0001133"}


id: GO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP1 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"EP1 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP1 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP1 receptor binding","type":"exact"}],"termid":"GO:0031864"}


id: PBO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR and DUF1771 domain protein (predicted)","termid":"PBO:0002686"}


id: PBO:0073413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 17","termid":"PBO:0073413"}


id: PBO:0040739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 5","termid":"PBO:0040739"}


id: PBO:0056803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1 pseudogene 1","termid":"PBO:0056803"}


id: PBO:0031405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_cell","termid":"PBO:0031405"}


id: GO:0034931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + XCH3 = 1-methoxypyrene + HX.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene methyltransferase activity (obsolete GO:0034931)","termid":"GO:0034931"}


id: PBO:0052469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 15","termid":"PBO:0052469"}


id: GO:0018545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of a nitrate group to an amino or hydroxylamino group on toluene or a toluene derivative.","definition_xrefs":["UM-BBD_enzymeID:e0346"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H nitroreductase activity (obsolete GO:0018545)","termid":"GO:0018545"}


id: GO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.","definition_xrefs":["GOC:ef","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antibiotic","synonyms":[{"name":"antibiotic susceptibility/resistance","type":"related"}],"termid":"GO:0046677"}


id: PBO:0068237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal N3","termid":"PBO:0068237"}


id: PBO:0109129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 1","termid":"PBO:0109129"}


id: PBO:0000566
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperammonemia","termid":"PBO:0000566"}


id: PBO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 2","termid":"PBO:0048808"}


id: PBO:0046037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 5","termid":"PBO:0046037"}


id: GO:0010470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastrulation","termid":"GO:0010470"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["MeSH:D009435","GOC:dos","GOC:jl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


id: GO:0099006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into a host cell, following endocytosis, via permeabilization of the endosomal membrane by membrane penetration protein(s) of the symbiont. This process mediates the entry of some non-enveloped virus into eukaryotic cells. In some cases, viral membrane-penetration protein requires to be activated to display its membrane penetrating activity. Activation can be due to receptor binding or the acidic pH of the endosomal lumen.","definition_xrefs":["PMID:25055856","PMID:15329727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of endosomal membrane","synonyms":[{"name":"viral entry via permeabilization of endosomal membrane","type":"narrow"}],"termid":"GO:0099006"}


id: SO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig composed of mRNA_reads.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_contig","synonyms":[{"name":"mRNA contig","type":"related"}],"termid":"SO:0001829"}


id: GO:0004707
data:
  {"annotated_genes":["SJAG_02592","SJAG_02923","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90486,92482,98250],"is_not":false,"summary":null,"term":"GO:0004707"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein + ATP = protein phosphate + ADP. This reaction is the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02923":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0016740","GO:0003824","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"MAP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5654562","Reactome:R-HSA-5654566","Reactome:R-HSA-5654560","Reactome:R-HSA-198733","Reactome:R-HSA-9626832","GO:0016909","Reactome:R-HSA-111898","MetaCyc:2.7.11.24-RXN","GO:0016908","Reactome:R-HSA-73722","KEGG_REACTION:R00162","GO:0008339","GO:0008338","Reactome:R-HSA-451366","Reactome:R-HSA-5654565","EC:2.7.11.24","Reactome:R-HSA-445079"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKK-activated) activity","type":"related"},{"name":"ERK","type":"related"},{"name":"ERK1","type":"exact"},{"name":"ERK2","type":"related"},{"name":"MAP kinase 1 activity","type":"narrow"},{"name":"MAP kinase 2 activity","type":"narrow"},{"name":"MAPK","type":"related"},{"name":"MBP kinase I activity","type":"narrow"},{"name":"MBP kinase II activity","type":"narrow"},{"name":"SAP kinase activity","type":"narrow"},{"name":"SAPK","type":"narrow"},{"name":"extracellular signal-regulated kinase activity","type":"narrow"},{"name":"mitogen activated kinase activity","type":"exact"},{"name":"mitogen-activated protein kinase activity","type":"related"},{"name":"myelin basic protein kinase activity","type":"narrow"},{"name":"stress-activated kinase activity","type":"narrow"},{"name":"stress-activated protein kinase activity","type":"narrow"}],"termid":"GO:0004707","terms_by_termid":{"GO:0004707":null}}


id: PBO:0066223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM26 antisense RNA 1","termid":"PBO:0066223"}


id: GO:0015453
data:
  {"annotated_genes":["SJAG_01490","SJAG_05629","SJAG_01355","SJAG_01077","SJAG_01190","SJAG_MIT13","SJAG_02504","SJAG_04152","SJAG_00976","SJAG_07006","SJAG_00601","SJAG_MIT03","SJAG_07007","SJAG_00755","SJAG_02646","SJAG_03337","SJAG_MIT20","SJAG_MIT04","SJAG_03490"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115112,115087,110297,104364,85348,115086,110723,115111,112888,115065,88053,111518,84339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[108934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[100578,109476,115090,113735,114202,100175,104042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Primary active transport of a solute across a membrane, driven by exothermic flow of electrons from a reduced substrate to an oxidized substrate. Primary active transport is catalysis of the transport of a solute across a membrane, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is driven by a primary energy source.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","TC:3.D.-.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oxidoreduction-driven active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:3.D"],"synonyms":[{"name":"oxidoreduction-driven transporter","type":"exact"}],"termid":"GO:0015453","terms_by_termid":{"GO:0004129":null,"GO:0008121":null,"GO:0008137":null}}


id: PBO:0054273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1661","termid":"PBO:0054273"}


id: PATO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to retain radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absorption quality","termid":"PATO:0001293"}


id: RO:HOM0000036
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves two members of a larger set of homologs.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_homology_relationship_with","synonyms":[{"name":"many to many homologous to","type":"exact"},{"name":"many-to-many homology","type":"exact"},{"name":"many:many homology ","type":"exact"}],"termid":"RO:HOM0000036"}


id: PBO:0065727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 4","termid":"PBO:0065727"}


id: PBO:0079788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A9","termid":"PBO:0079788"}


id: PBO:0091511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma1","termid":"PBO:0091511"}


id: FYECO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin","termid":"FYECO:0000398"}


id: PBO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit delta","termid":"PBO:0048206"}


id: GO:0047941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + NADP+ = D-glucurono-3,6-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.20","RHEA:18925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronolactone reductase activity","secondary_identifiers":["MetaCyc:GLUCURONOLACTONE-REDUCTASE-RXN","KEGG_REACTION:R03183"],"termid":"GO:0047941"}


id: PBO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 6 pseudogene","termid":"PBO:0062059"}


id: GO:0003805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Arg-Ala and Arg-Val bonds in factor IX to form factor IXa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor XIa activity (obsolete GO:0003805)","synonyms":[{"name":"activated blood-coagulation factor XI","type":"related"},{"name":"activated plasma thromboplastin antecedent","type":"related"},{"name":"blood coagulation factor XI activity","type":"exact"},{"name":"blood-coagulation factor XIa","type":"related"},{"name":"coagulation factor XIa activity","type":"exact"},{"name":"plasma thromboplastin antecedent activity","type":"related"}],"termid":"GO:0003805"}


id: GO:0009210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate catabolic process","termid":"GO:0009203"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009210"}


