# terms

id: GO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"}


id: GO:0141073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts opsonization by the host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28860090","PMID:18068388","PMID:2307127","PMID:18941224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host opsonization","synonyms":[{"name":"disruption by symbiont of host opsonization","type":"exact"}],"termid":"GO:0141073"}


id: PBO:0027557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_RNA_polymerase_II_promoter","termid":"PBO:0027557"}


id: GO:0019171
data:
  {"annotated_genes":["SJAG_04107","SJAG_00305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96840,98147],"is_not":false,"summary":null,"term":"GO:0019171"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R)-hydroxyacyl-[acyl-carrier-protein] = a (2E)-enoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["RHEA:13097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.2.1.59","MetaCyc:3-HYDROXYDECANOYL-ACP-DEHYDR-RXN"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"related"},{"name":"3-hydroxyacyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0019171","terms_by_termid":{"GO:0019171":null}}


id: PBO:0070688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 59","termid":"PBO:0070688"}


id: PBO:0039470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD17 divergent transcript","termid":"PBO:0039470"}


id: GO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"positively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development","termid":"GO:0061063"}


id: PBO:0004893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr7","termid":"PBO:0004893"}


id: MOD:01626
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cystine by forming a disulfide bond that either cross-links two peptidyl L-cysteine residues, or modifies a peptidyl cysteine with a free cysteine.","definition_xrefs":["PubMed:1988019","RESID:AA0025","ChEBI:16283","PubMed:2001356","PubMed:2076469","PubMed:8344916","PubMed:3083866","PubMed:366603","PubMed:7918467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:01626"}


id: PBO:0062185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 4C","termid":"PBO:0062185"}


id: GO:1905445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:15533940","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"positively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of clathrin coat assembly","synonyms":[{"name":"activation of clathrin cage assembly","type":"narrow"},{"name":"activation of clathrin coat assembly","type":"narrow"},{"name":"positive regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin coat assembly","type":"exact"},{"name":"up-regulation of clathrin cage assembly","type":"exact"},{"name":"up-regulation of clathrin coat assembly","type":"exact"},{"name":"upregulation of clathrin cage assembly","type":"exact"},{"name":"upregulation of clathrin coat assembly","type":"exact"}],"termid":"GO:1905445"}


id: PBO:0044476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 19 subfamily A member 1","termid":"PBO:0044476"}


id: PBO:0068170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 477","termid":"PBO:0068170"}


id: FYPO:0004708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the ratio of large to small ribosomal subunits present in the cytosol is lower than normal..","definition_xrefs":["PMID:26122634","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytosolic large:small ribosomal subunit ratio","synonyms":[{"name":"decreased 60S:40S cytosolic ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic 60S:40S ribosomal subunit ratio","type":"exact"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic large:small ribosomal subunit ratio during vegetative growth","type":"exact"},{"name":"decreased cytosolic ribosomal large:small subunit ratio","type":"exact"},{"name":"reduced cytosolic large:small ribosomal subunit ratio","type":"exact"}],"termid":"FYPO:0004708"}


id: PR:O14086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.03c","secondary_identifiers":["UniProtKB:O14086"],"synonyms":[{"name":"DNA-directed RNA polymerase I 49 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A49 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1E","type":"exact"}],"termid":"PR:O14086"}


id: PBO:0042294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD4 molecule","termid":"PBO:0042294"}


id: GO:0140279
data:
  {"annotated_genes":["SJAG_00514","SJAG_03048","SJAG_01188","SJAG_04776","SJAG_03704","SJAG_03342","SJAG_04666","SJAG_05290","SJAG_04597","SJAG_03631","SJAG_01114","SJAG_04468","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113939],"is_not":false,"summary":null,"term":"GO:0140279"},{"annotations":[98471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[109437,102456,85996,103125,88517,101256,113938,111530,85364,89908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[83675,90521,88518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic division septum formation. Division septum formation is the assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic division septum assembly","termid":"GO:0140278"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of mitotic division septum assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of division septum formation involved in mitotic cell cycle","type":"exact"},{"name":"regulation of formation of division septum involved in mitotic cell cycle","type":"exact"},{"name":"regulation of septin assembly and septum biosynthesis involved in mitotic cell cycle","type":"related"},{"name":"regulation of septin assembly and septum formation involved in mitotic cell cycle","type":"related"}],"termid":"GO:0140279","terms_by_termid":{"GO:0140279":null,"GO:0140281":null,"GO:1905757":null,"GO:1905758":null}}


id: GO:1990543
data:
  {"annotated_genes":["SJAG_01890","SJAG_01589"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84409,98699],"is_not":false,"summary":null,"term":"GO:1990543"}]},"cv_name":"biological_process","definition":"The process in which S-adenosyl-L-methionine is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14609944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosyl-L-methionine transmembrane transport","termid":"GO:1901962"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01589":null,"SJAG_01890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mitochondrial S-adenosyl-L-methionine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990543","terms_by_termid":{"GO:1990543":null}}


id: PBO:0066696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability 2","termid":"PBO:0066696"}


id: PBO:0081022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 3","termid":"PBO:0081022"}


id: PR:Q10367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glo3 gene.","definition_xrefs":["UniProtKB:Q10367","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase-activating protein glo3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.17c","synonyms":[{"name":"ARF GAP glo3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-glo3","type":"exact"}],"termid":"PR:Q10367"}


id: PBO:0017822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 L associated factor 1 Laf1","termid":"PBO:0017822"}


id: PBO:0041587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 2","termid":"PBO:0041587"}


id: PBO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0032706"}


id: GO:0010525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposition, RNA-mediated (obsolete GO:0010525)","termid":"GO:0010525"}


id: FYPO:0006203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular dATP level","synonyms":[{"name":"decreased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dATP level during vegetative growth","type":"exact"},{"name":"reduced cellular dATP level","type":"exact"}],"termid":"FYPO:0006203"}


id: PBO:0038798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3B (pseudogene)","termid":"PBO:0038798"}


id: PBO:0074839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32B","termid":"PBO:0074839"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: GO:0045113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of integrin biosynthetic process","synonyms":[{"name":"regulation of integrin anabolism","type":"exact"},{"name":"regulation of integrin biosynthesis","type":"exact"},{"name":"regulation of integrin formation","type":"exact"},{"name":"regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045113"}


id: GO:1905693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:PARL","PMID:23767959","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidic acid biosynthetic process","termid":"GO:0006654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidic acid biosynthetic process","synonyms":[{"name":"regulation of phosphatidic acid anabolism","type":"exact"},{"name":"regulation of phosphatidic acid biosynthesis","type":"exact"},{"name":"regulation of phosphatidic acid formation","type":"exact"},{"name":"regulation of phosphatidic acid synthesis","type":"exact"}],"termid":"GO:1905693"}


id: GO:0030742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex when at least one of the interacting partners is in the GTP-bound state.","definition_xrefs":["GOC:krc","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"GTP-dependent protein binding","termid":"GO:0030742"}


id: PBO:0069451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 716, pseudogene","termid":"PBO:0069451"}


id: PBO:0078441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma constant 1","termid":"PBO:0078441"}


id: PBO:0067225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 294, pseudogene","termid":"PBO:0067225"}


id: PBO:0034067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-role_of","termid":"PBO:0034067"}


id: PATO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000606 absolute angle value (obsolete PATO:0000606)","termid":"PATO:0000606"}


id: PBO:0084533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs","termid":"PBO:0084533"}


id: PBO:0086507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086507"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: PBO:0055234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2661","termid":"PBO:0055234"}


id: GO:0098898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the dense core granule membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"dense core granule lumen","synonyms":[{"name":"dense core vesicle lumen","type":"exact"}],"termid":"GO:0098898"}


id: PBO:0053658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 824","termid":"PBO:0053658"}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: PBO:0090439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec67","termid":"PBO:0090439"}


id: PBO:0078097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 5","termid":"PBO:0078097"}


id: PBO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu25","termid":"PBO:0003683"}


id: GO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mah","PMID:5002049","GOC:pg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"down regulation of aggregate size","type":"exact"},{"name":"down-regulation of aggregate size","type":"exact"},{"name":"downregulation of aggregate size","type":"exact"},{"name":"inhibition of aggregate size","type":"narrow"}],"termid":"GO:0031158"}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11739:SF0","OMA:SCHPO00965","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: PBO:0085094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor for the ribosomal pre-60S subunit; shuttling factor which directly binds FG rich nucleoporins and facilities translocation through the nuclear pore complex; interacts directly with Alb1p; responsible for Tif6p recycling defects in the absence of Rei1; associated with the ribosomal export complex","termid":"PBO:0085094"}


id: PBO:0054602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2006","termid":"PBO:0054602"}


id: PBO:0074911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 82","termid":"PBO:0074911"}


id: GO:0044135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host phyllosphere (obsolete GO:0044135)","termid":"GO:0044135"}


id: GO:0004612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + oxaloacetate = ADP + CO2 + H+ + phosphoenolpyruvate.","definition_xrefs":["EC:4.1.1.49","RHEA:18617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase (ATP) activity","secondary_identifiers":["MetaCyc:PEPCARBOXYKIN-RXN","KEGG_REACTION:R00341"],"synonyms":[{"name":"ATP:oxaloacetate carboxy-lyase (transphosphorylating)","type":"related"},{"name":"ATP:oxaloacetate carboxy-lyase (transphosphorylating; phosphoenolpyruvate-forming)","type":"related"},{"name":"PEPCK (ATP)","type":"related"},{"name":"PEPK","type":"related"},{"name":"phosphoenolpyruvate carboxylase (ATP)","type":"related"},{"name":"phosphoenolpyruvic carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase (adenosine triphosphate)","type":"related"},{"name":"phosphopyruvate carboxylase (ATP)","type":"related"}],"termid":"GO:0004612"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:cjm","GOC:mtg_cardio","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: PBO:0048715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 1","termid":"PBO:0048715"}


id: PR:O36032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutaredoxin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02023","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.20","secondary_identifiers":["UniProtKB:O36032"],"synonyms":[{"name":"Spom972h-GLRX","type":"exact"}],"termid":"PR:O36032"}


id: GO:0031503
data:
  {"annotated_genes":["SJAG_04379","SJAG_01756","SJAG_02274","SJAG_03882","SJAG_03729","SJAG_03719","SJAG_04721","SJAG_02210","SJAG_04076","SJAG_00753","SJAG_01449","SJAG_01065","SJAG_01013","SJAG_02761","SJAG_03496","SJAG_02624","SJAG_01339","SJAG_04148","SJAG_03658","SJAG_01358","SJAG_02737","SJAG_00727","SJAG_01745","SJAG_03012","SJAG_03540","SJAG_02814","SJAG_00794","SJAG_03299","SJAG_03593","SJAG_05196","SJAG_02250","SJAG_04940","SJAG_01805","SJAG_01338","SJAG_01391","SJAG_03683","SJAG_00471","SJAG_04308","SJAG_00178","SJAG_02757","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85718,113007,98914,87447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[113246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990735"},{"annotations":[105221,95318,114185,89901,98535,91416,96480,114702,111990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[101821,85908,99092,95734,97969,114232,113725,112298,87188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[95913,87189,99093,93179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[96512,101462,106506,97488,107517,112235,87822,102233,90095,85140,100042,93172,91084,98745,92228,99499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"}]},"cv_name":"biological_process","definition":"A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00727":null,"SJAG_00753":null,"SJAG_00794":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01805":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03012":null,"SJAG_03299":null,"SJAG_03496":null,"SJAG_03540":null,"SJAG_03593":null,"SJAG_03658":null,"SJAG_03683":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04076":null,"SJAG_04148":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034629"],"synonyms":[{"name":"cellular protein complex localisation","type":"related"},{"name":"cellular protein complex localization","type":"related"},{"name":"cellular protein-containing complex localization","type":"related"},{"name":"establishment and maintenance of cellular protein complex localization","type":"related"},{"name":"establishment and maintenance of protein complex localization","type":"exact"},{"name":"protein complex localisation","type":"exact"},{"name":"protein complex localization","type":"related"}],"termid":"GO:0031503","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0072766":null,"GO:1990571":null,"GO:1990735":null}}


id: GO:0070494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thrombin-activated receptor signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"regulation of thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070494"}


id: PBO:0087087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L5; nascent Rpl5p is bound by specific chaperone Syo1p during translation; homologous to mammalian ribosomal protein L5 and bacterial L18; binds 5S rRNA and is required for 60S subunit assembly","termid":"PBO:0087087"}


id: PBO:0082620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing the Tor2p kinase and other proteins; complex may have a role in regulation of cell growth","termid":"PBO:0082620"}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: PBO:0005758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc5","termid":"PBO:0005758"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GO_REF:0000058","GOC:TermGenie","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: PBO:0110158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit Sap18","termid":"PBO:0110158"}


id: PBO:0030447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity","termid":"PBO:0030447"}


id: FYPO:0006780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Rbin-1. Cells stop growing (and may die) at a concentration of Rbin-1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to Rbin-1","synonyms":[{"name":"hypersensitive to Rbin-1","type":"exact"},{"name":"sensitive to Rbin-1 during mitotic cell cycle","type":"related"},{"name":"sensitive to Rbin-1 during vegetative growth","type":"exact"},{"name":"sensitive to ribozinoindole-1","type":"exact"}],"termid":"FYPO:0006780"}


id: GO:0018395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-lysine to peptidyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine","termid":"GO:0018395"}


id: FYPO:0000080
data:
  {"alleles_by_uniquename":{"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115558,115635,115636,115637,115651],"is_not":false,"summary":null,"term":"FYPO:0000080"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal at a low temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_03198":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth at low temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:32243490":null},"secondary_identifiers":["FYPO:0002175"],"single_locus_annotated_genes":["SJAG_05207","SJAG_01946","SJAG_03198"],"single_locus_genotype_uniquenames":["cem1delta","cmp7delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","oar2delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression"],"synonyms":[{"name":"cold sensitive","type":"related"},{"name":"cold sensitivity: increased","type":"related"},{"name":"decreased growth at low temperature","type":"broad"},{"name":"decreased vegetative cell population growth at low temperature","type":"exact"},{"name":"growth defect, slow growth at low temperatures","type":"related"},{"name":"hypersensitive to cold","type":"related"},{"name":"reduced growth at low temperature","type":"related"},{"name":"sensitive to cold","type":"related"},{"name":"sensitive to cold during mitotic cell cycle","type":"related"},{"name":"sensitive to cold during vegetative growth","type":"exact"},{"name":"slow growth at low temperature","type":"related"}],"termid":"FYPO:0000080","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO_EXT:0000001":null}}


id: PBO:0049237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM7 antisense RNA 1","termid":"PBO:0049237"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: PBO:0073876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 4","termid":"PBO:0073876"}


id: PBO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase A","termid":"PBO:0051947"}


id: MOD:00200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to D-methionine.","definition_xrefs":["RESID:AA0193","PubMed:16033333","ChEBI:29984","PubMed:2542051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-methionine","synonyms":[{"name":"(2R)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"D-Met","type":"exact"},{"name":"D-methionine","type":"exact"},{"name":"MOD_RES D-methionine","type":"exact"}],"termid":"MOD:00200"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dph","PMID:12626695","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: FYPO:0007456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3' overhang single-stranded DNA endodeoxyribonuclease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased 3' overhang single-stranded DNA endodeoxyribonuclease activity","termid":"FYPO:0007456"}


id: FYPO:0005739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the division of chromosomes into two distinct unequal masses containing unseparated sister chromatids, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:11792803","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation with unseparated chromosomes","termid":"FYPO:0005739"}


id: PBO:0046887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member C","termid":"PBO:0046887"}


id: GO:0036085
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89433],"is_not":false,"summary":null,"term":"GO:0036085"}]},"cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the Golgi lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"GDP-fucose import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-fucose import into Golgi","type":"exact"},{"name":"GDP-fucose transport across Golgi membrane","type":"exact"},{"name":"GDP-fucose transport into Golgi lumen","type":"exact"}],"termid":"GO:0036085","terms_by_termid":{"GO:0036085":null}}


id: PBO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule","termid":"PBO:0035709"}


id: PBO:0043387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 1","termid":"PBO:0043387"}


id: PBO:0067674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 856, pseudogene","termid":"PBO:0067674"}


id: GO:0046151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment catabolic process","synonyms":[{"name":"eye pigment breakdown","type":"exact"},{"name":"eye pigment catabolism","type":"exact"},{"name":"eye pigment degradation","type":"exact"}],"termid":"GO:0046151"}


id: PBO:0031352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_respiration","termid":"PBO:0031352"}


id: GO:0035105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of a sterol regulatory element binding protein (SREBP) into the nucleus, across the nuclear membrane, in response to altered levels of one or more lipids. SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["PMID:12923525","GOC:bf","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein import into nucleus (obsolete GO:0035105)","synonyms":[{"name":"SREBP import into nucleus","type":"exact"},{"name":"SREBP import into nucleus involved in sterol depletion response","type":"exact"},{"name":"SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, SREBP import into nucleus","type":"exact"},{"name":"sterol depletion response, SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, sterol regulatory element binding protein import into nucleus","type":"exact"},{"name":"sterol depletion response, sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein import into nucleus involved in sterol depletion response","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation involved in sterol depletion response","type":"narrow"}],"termid":"GO:0035105"}


id: FYPO:0002485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of two meiotic reciprocal recombination events (crossovers) close to each other is decresed. As a result, the resolution of meiotic recombination intermediates results in the formation of a crossover at a lower frequency than normal, and the occurrence of intergenic meiotic recombination is decreased.","definition_xrefs":["PomBase:gs","PomBase:mah","PMID:22723423","PMID:16169489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased intergenic meiotic recombination","secondary_identifiers":["FYPO:0003180"],"synonyms":[{"name":"decreased meiotic intergenic recombination","type":"exact"},{"name":"decreased occurrence of meiotic cross-overs","type":"related"},{"name":"decreased resolution of meiotic recombination intermediates with crossover formation","type":"exact"},{"name":"reduced intergenic meiotic recombination","type":"exact"},{"name":"reduced resolution of meiotic recombination intermediates with crossover formation","type":"exact"}],"termid":"FYPO:0002485"}


id: MOD:00989
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant, the difference component of MOD:01079. Remap to MOD:01079.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00989 acetamidomethyl (Acm) (obsolete MOD:00989)","termid":"MOD:00989"}


id: GO:0016801
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any ether or thioether bond, -O- or -S- respectively.","definition_xrefs":["GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on ether bonds","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.3.-.-"],"termid":"GO:0016801","terms_by_termid":{"GO:0004301":null}}


id: FYPO:0001846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase A of mitosis is longer than normal. Anaphase A is the mitotic cell cycle phase during which the kinetochore microtubules shorten as chromosomes move toward the spindle poles.","definition_xrefs":["PomBase:mah","GO:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic anaphase","termid":"FYPO:0000618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic anaphase A","synonyms":[{"name":"delayed mitotic anaphase A progression","type":"related"},{"name":"increased duration of anaphase A during mitotic cell cycle","type":"exact"},{"name":"increased duration of mitotic anaphase A during vegetative growth","type":"exact"},{"name":"increased duration of mitotic anaphase A progression","type":"exact"},{"name":"prolonged mitotic anaphase A","type":"exact"}],"termid":"FYPO:0001846"}


id: PBO:0091882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase Pan5","termid":"PBO:0091882"}


id: PBO:0039226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 1","termid":"PBO:0039226"}


id: PBO:0040232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 4","termid":"PBO:0040232"}


id: PBO:0067747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 46","termid":"PBO:0067747"}


id: PATO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waisted","termid":"PATO:0002431"}


id: PBO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U3B","termid":"PBO:0004740"}


id: PBO:0091386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b translation regulator Cbp8","termid":"PBO:0091386"}


id: PBO:0053934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1233","termid":"PBO:0053934"}


id: GO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an animal in response to touch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thigmotaxis","synonyms":[{"name":"stereotaxis","type":"exact"},{"name":"taxis in response to mechanical stimulus","type":"broad"},{"name":"taxis in response to touch stimulus","type":"exact"}],"termid":"GO:0001966"}


id: GO:0002670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell anergy","synonyms":[{"name":"regulation of B lymphocyte anergy","type":"exact"},{"name":"regulation of B-cell anergy","type":"exact"},{"name":"regulation of B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002670"}


id: MOD:01992
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioether bond between a cysteine thiol and the alpha-carbon of another amino acid residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"}


id: GO:0008925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + maltose = CoA + acetyl-maltose.","definition_xrefs":["EC:2.3.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"maltose O-acetyltransferase activity","secondary_identifiers":["MetaCyc:MALTACETYLTRAN-RXN","RHEA:10456"],"synonyms":[{"name":"acetyl-CoA:maltose O-acetyltransferase activity","type":"related"},{"name":"maltose transacetylase activity","type":"related"}],"termid":"GO:0008925"}


id: GO:0071587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration of one or more amino acid residues within the CAAX box region of CAAX box proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"},{"relation_name":"part_of","term_name":"CAAX-box protein maturation","termid":"GO:0080120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"CAAX-box protein modification","termid":"GO:0071587"}


id: PR:O42844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 33 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase type II (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.06c","secondary_identifiers":["UniProtKB:O42844"],"synonyms":[{"name":"CAM kinase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-STK33","type":"exact"}],"termid":"PR:O42844"}


id: PR:O59680
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c1, heme protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03118","PRO:DNx","PANTHER:PTHR10266:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1, heme protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.18","secondary_identifiers":["UniProtKB:O59680"],"synonyms":[{"name":"Spom972h-CYC1","type":"exact"},{"name":"complex III subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"complex III subunit IV (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome b-c1 complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytochrome c-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59680"}


id: PBO:0091596
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerate PhosphoMutase","termid":"PBO:0091596"}


id: PBO:0045285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 36","termid":"PBO:0045285"}


id: GO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of a transport vesicle with a target membrane on another vesicle.","definition_xrefs":["GOC:bf","PMID:16618809","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with vesicle","synonyms":[{"name":"vesicle to vesicle fusion","type":"exact"},{"name":"vesicle-vesicle fusion","type":"exact"}],"termid":"GO:0061782"}


id: GO:0016484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Required for the maturation and activation of proprotein convertase 2.","definition_xrefs":["PMID:10749852","GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 2 activator activity (obsolete GO:0016484)","synonyms":[{"name":"proprotein convertase 2 activator activity","type":"exact"}],"termid":"GO:0016484"}


id: PBO:0041627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 A","termid":"PBO:0041627"}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:dph","GOC:tb","PMID:10358008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: PBO:0075695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 3 pseudogene 1","termid":"PBO:0075695"}


id: FYPO:0006775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-4-phosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular phosphatidylinositol-4-phosphate level","termid":"FYPO:0001015"},{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-4-phosphate level","synonyms":[{"name":"decreased PI-4-P accumulation","type":"related"},{"name":"decreased cellular PI(4)P level","type":"exact"},{"name":"decreased cellular PI-4-P level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-4-phosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-4-phosphate level","type":"exact"}],"termid":"FYPO:0006775"}


id: FYPO:0005730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal arginase activity","termid":"FYPO:0005730"}


id: FYPO:0000581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased spore germination frequency","synonyms":[{"name":"decreased spore germination","type":"exact"},{"name":"decreased spore viability","type":"related"},{"name":"reduced spore germination frequency","type":"exact"},{"name":"reduced spore viability","type":"related"},{"name":"spore germination: decreased","type":"related"}],"termid":"FYPO:0000581"}


id: PBO:0076506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 6 pseudogene","termid":"PBO:0076506"}


id: PBO:0051584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 binding protein","termid":"PBO:0051584"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: PBO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS6 pseudogene 1","termid":"PBO:0075315"}


id: GO:0071585
data:
  {"annotated_genes":["SJAG_01344","SJAG_03497","SJAG_04516","SJAG_00988","SJAG_02599","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114240,104509,89401,93156,93117,93474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of cadmium ion. These may include transport of cadmium away from sensitive areas and to compartments or complexes whose purpose is sequestration of cadmium ion.","definition_xrefs":["PMID:16741752","GOC:kmv","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"stress response to cadmium ion","termid":"GO:1990170"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of cadmium ion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071585","terms_by_termid":{"GO:0098849":null}}


id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: PBO:0079630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q2","termid":"PBO:0079630"}


id: PBO:0024474
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HRR25","termid":"PBO:0024474"}


id: GO:0140010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-aspartate from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:7914198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-aspartate transmembrane transporter activity","termid":"GO:0140010"}


id: PBO:0045732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAF1 antisense RNA 1","termid":"PBO:0045732"}


id: PBO:0063352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen C-endopeptidase enhancer","termid":"PBO:0063352"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: PR:000050217
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P09988, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PMID:31468675","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Ubiq(K14)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K14-ubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"hht1/InitMet-/Ubiq:(K15)","type":"exact"},{"name":"hht1/Ubiq(K14)","type":"exact"}],"termid":"PR:000050217"}


id: GO:0140978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:28892042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit binding","termid":"GO:0043023"},{"relation_name":"is_a","term_name":"mitochondrial ribosome binding","termid":"GO:0097177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit binding","synonyms":[{"name":"mitochondrial ribosomal large subunit binding","type":"exact"}],"termid":"GO:0140978"}


id: PBO:0056769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 21A pseudogene 1","termid":"PBO:0056769"}


id: GO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by a steroid hormone binding to a receptor.","definition_xrefs":["PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"steroid hormone receptor signaling pathway","synonyms":[{"name":"steroid hormone mediated signalling","type":"exact"},{"name":"steroid hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0043401"}


id: PBO:0071239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 80","termid":"PBO:0071239"}


id: PBO:0058333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4707","termid":"PBO:0058333"}


id: PBO:0069556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 828, pseudogene","termid":"PBO:0069556"}


id: PBO:0045998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1A domain containing","termid":"PBO:0045998"}


id: FYPO:0006225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tetramethylammonium. Cells stop growing (and may die) at a concentration of tetramethylammonium that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tetramethylammonium","synonyms":[{"name":"hypersensitive to tetramethylammonium","type":"exact"},{"name":"sensitive to TMA","type":"exact"},{"name":"sensitive to tetramethylammonium during mitotic cell cycle","type":"related"},{"name":"sensitive to tetramethylammonium during vegetative growth","type":"exact"}],"termid":"FYPO:0006225"}


id: PBO:0084172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication","termid":"PBO:0084172"}


id: PBO:0030742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology_during_nitrogen_starvation","termid":"PBO:0030742"}


id: PATO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000548 blue light sensitivity value (obsolete PATO:0000548)","termid":"PATO:0000548"}


id: PBO:0080415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS50 subunit of EARP/GARPII complex","termid":"PBO:0080415"}


id: GO:0052834
data:
  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008934"},{"annotations":[65165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052832"},{"annotations":[65166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052833"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol monophosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24056","MetaCyc:RXN-10949"],"synonyms":[{"name":"L-myo-inositol-phosphate phosphatase activity","type":"related"},{"name":"inositol phosphatase activity","type":"related"},{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"inositol-phosphate phosphatase activity","type":"related"},{"name":"myo-inositol monophosphatase activity","type":"related"},{"name":"myo-inositol phosphatase activity","type":"related"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"},{"name":"myo-inositol-phosphatase activity","type":"related"},{"name":"myo-inositol-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0052834","terms_by_termid":{"GO:0008934":null,"GO:0052832":null,"GO:0052833":null}}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: GO:1990253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of leucine.","definition_xrefs":["PMID:19033384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid starvation","termid":"GO:0034198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leucine starvation","termid":"GO:1990253"}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: GO:1902002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation that is involved in cellular protein catabolic process.","definition_xrefs":["PMID:21993622","PMID:23264631","GOC:rb","GOC:TermGenie","PMID:21098119"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in cellular protein catabolic process (obsolete GO:1902002)","synonyms":[{"name":"protein amino acid phosphorylation involved in cellular protein breakdown","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein catabolic process","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein catabolism","type":"exact"},{"name":"protein amino acid phosphorylation involved in cellular protein degradation","type":"exact"},{"name":"protein phosphorylation involved in cellular protein breakdown","type":"exact"},{"name":"protein phosphorylation involved in cellular protein catabolism","type":"exact"},{"name":"protein phosphorylation involved in cellular protein degradation","type":"exact"}],"termid":"GO:1902002"}


id: GO:0035339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex at least composed of serine palmitoyltransferases and ORM proteins (known as ORMDL proteins in mammals and other higher vertebrates) that plays a key role in sphingolipid homeostasis.","definition_xrefs":["PMID:20182505"],"gene_count":0,"genotype_count":0,"name":"obsolete SPOTS complex (obsolete GO:0035339)","synonyms":[{"name":"serine palmitoyltransferase, Orm1/2, Tsc3 and Sac1 complex","type":"narrow"}],"termid":"GO:0035339"}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: GO:0005553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A protein encoded by some ubiquitin genes which consists of a single copy of ubiquitin fused to a ribosomal protein.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-ribosomal protein fusion protein (obsolete GO:0005553)","synonyms":[{"name":"ubiquitin-ribosomal protein fusion protein","type":"exact"}],"termid":"GO:0005553"}


id: FYPO:0005084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal RNA (rRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at rRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at rRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at rDNA","type":"exact"},{"name":"normal protein localization to chromatin at rRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at rRNA gene during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at ribosomal DNA","type":"exact"}],"termid":"FYPO:0005084"}


id: GO:0075260
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075260","terms_by_termid":{"GO:0075319":null}}


id: PBO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cochlin","termid":"PBO:0043532"}


id: PR:O13994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kei1 gene.","definition_xrefs":["UniProtKB:O13994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.13c","synonyms":[{"name":"ICP synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-kei1","type":"exact"}],"termid":"PR:O13994"}


id: PATO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased intensity","synonyms":[{"name":"high intensity","type":"exact"}],"termid":"PATO:0001782"}


id: PBO:0091844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, heat shock specific","termid":"PBO:0091844"}


id: PBO:0053757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 999","termid":"PBO:0053757"}


id: PBO:0027722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_deacetylation","termid":"PBO:0027722"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: PBO:0080211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Hippel-Lindau tumor suppressor","termid":"PBO:0080211"}


id: PBO:0066895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 195","termid":"PBO:0066895"}


id: FYPO:0001906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to thiamine starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to thiamine starvation","synonyms":[{"name":"abnormal cellular response to thiamin starvation","type":"exact"},{"name":"abnormal cellular response to thiamine depletion","type":"exact"},{"name":"abnormal cellular response to thiamine deprivation","type":"exact"},{"name":"abnormal cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to vitamin B1 starvation","type":"exact"}],"termid":"FYPO:0001906"}


id: GO:0021841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons toward the signal, where this process is involved in migration from the subpallium to the cortex.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"positive chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021841"}


id: PR:P0CT67
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.01c","synonyms":[{"name":"Spom972h-rps1802","type":"exact"}],"termid":"PR:P0CT67"}


id: GO:0042653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The mitochondrial membrane segment of respiratory chain complex I. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["ISBN:0716749556","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"},{"relation_name":"part_of","term_name":"respiratory chain complex I","termid":"GO:0045271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I, membrane segment","synonyms":[{"name":"NADH-Q oxidoreductase complex, membrane segment","type":"broad"}],"termid":"GO:0042653"}


id: GO:0015608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + carbohydrate(out) -> ADP + phosphate + carbohydrate(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"carbohydrate-importing ABC transporter activity","secondary_identifiers":["TC:3.A.1.1.1"],"synonyms":[{"name":"carbohydrate uptake transporter activity","type":"exact"},{"name":"carbohydrate-importing ATPase activity","type":"broad"},{"name":"sugar transporter","type":"narrow"}],"termid":"GO:0015608"}


id: GO:2000196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of female gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of female gonad development","termid":"GO:2000194"},{"relation_name":"positively_regulates","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female gonad development","synonyms":[{"name":"positive regulation of ovarian development","type":"exact"},{"name":"positive regulation of ovary development","type":"exact"}],"termid":"GO:2000196"}


id: PBO:0062675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily C member 36","termid":"PBO:0062675"}


id: MOD:00700
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a tetrapyrrole group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrapyrrole modified residue","synonyms":[{"name":"TetrapyrRes","type":"exact"}],"termid":"MOD:00700"}


id: GO:0048185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to activin, a dimer of inhibin-beta subunits.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"activin binding","termid":"GO:0048185"}


id: GO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which an organism or tissue maintains a population of germ-line stem cells.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell population maintenance","termid":"GO:0030718"}


id: PBO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0001933"}


id: PBO:0054995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2410","termid":"PBO:0054995"}


id: PBO:0060512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF attachment protein gamma","termid":"PBO:0060512"}


id: FYPO:0000309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has an abnormal morphology (i.e. size, shape, or structure). An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore morphology","termid":"FYPO:0000348"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable spore with abnormal morphology","synonyms":[{"name":"lethal; spore with abnormal morphology","type":"exact"},{"name":"spore germination abolished, abnormal spore morphology","type":"related"},{"name":"spore germination abolished, misshapen spores","type":"related"}],"termid":"FYPO:0000309"}


id: SO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_methyladenosine","secondary_identifiers":["RNAMOD:005"],"synonyms":[{"name":"2-methylthio-N6-methyladenosine","type":"exact"},{"name":"ms2m6A","type":"exact"},{"name":"two methylthio N6 methyladenosine","type":"exact"}],"termid":"SO:0001299"}


id: PBO:0057337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 523","termid":"PBO:0057337"}


id: GO:0008113
data:
  {"annotated_genes":["SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91674],"is_not":false,"summary":null,"term":"GO:0008113"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin, and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the S enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.8.4.11","GOC:mah","PMID:11169920","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peptide-methionine (S)-S-oxide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676940","MetaCyc:RXN-8668","RHEA:14217","GO:0033742","GO:0072561","Reactome:R-HSA-1222363"],"synonyms":[{"name":"MsrA","type":"related"},{"name":"methionine S-oxide reductase (S-form oxidizing) activity","type":"related"},{"name":"methionine S-oxide reductase activity","type":"broad"},{"name":"methionine sulfoxide (protein) reductase activity","type":"exact"},{"name":"methionine sulfoxide reductase A activity","type":"related"},{"name":"methionine sulfoxide reductase activity","type":"broad"},{"name":"methionine sulphoxide reductase A activity","type":"related"},{"name":"peptide Met(O) reductase activity","type":"related"},{"name":"peptide methionine sulfoxide reductase activity","type":"related"},{"name":"peptide-L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (S)-S-oxide-forming] activity","type":"related"},{"name":"peptide-methionine-(S)-S-oxide reductase activity","type":"exact"},{"name":"protein-methionine-S-oxide reductase activity","type":"exact"}],"termid":"GO:0008113","terms_by_termid":{"GO:0008113":null}}


id: FYPO:0008155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which regulatory lncRNA 3' end processing is abnormal.","definition_xrefs":["PMID:32415063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal regulatory lncRNA 3'-end processing","termid":"FYPO:0008155"}


id: PBO:0083363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene SIR2/YDL042C","termid":"PBO:0083363"}


id: PBO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone)(predicted)","termid":"PBO:0015666"}


id: FYPO:0003855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide). Cells stop growing (and may die) at a concentration of MTT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to MTT","synonyms":[{"name":"hypersensitive to MTT","type":"exact"},{"name":"sensitive to 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide","type":"exact"},{"name":"sensitive to MTT during mitotic cell cycle","type":"related"},{"name":"sensitive to MTT during vegetative growth","type":"exact"}],"termid":"FYPO:0003855"}


id: PBO:0089595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Spt16","termid":"PBO:0089595"}


id: PBO:0056054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0056054"}


id: PBO:0053895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1180","termid":"PBO:0053895"}


id: GO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when a double layer of distinct follicle cells surrounds the oocyte. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198542771","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double layer follicle stage","synonyms":[{"name":"mammalian oogenesis stage 4","type":"exact"}],"termid":"GO:0048161"}


id: PBO:0113503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; endo-exonuclease with a role in DNA repair","termid":"PBO:0113503"}


id: PBO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-24","termid":"PBO:0051330"}


id: PBO:0011458
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Changed Amiloride Resistance","termid":"PBO:0011458"}


id: PBO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 6","termid":"PBO:0070368"}


id: PBO:0085645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor","termid":"PBO:0085645"}


id: PBO:0027400
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_triglyceride_biosynthetic_process","termid":"PBO:0027400"}


id: GO:0019718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Vesicular particles formed from disrupted endoplasmic reticulum membranes and studded with ribosomes on the outside.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete rough microsome (obsolete GO:0019718)","synonyms":[{"name":"rough microsome","type":"exact"}],"termid":"GO:0019718"}


id: PBO:0070558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 24","termid":"PBO:0070558"}


id: PBO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 35","termid":"PBO:0050218"}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: GO:1905251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GOC:BHF_miRNA","PMID:23069713","GOC:TermGenie","GOC:bc","GO_REF:0000060","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"heart process","termid":"GO:0003015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"EGFR signaling pathway involved in heart process","type":"exact"},{"name":"ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905251"}


id: GO:0004408
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90546,103561],"is_not":false,"summary":null,"term":"GO:0004408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: holocytochrome c = apocytochrome c + heme.","definition_xrefs":["EC:4.4.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"holocytochrome-c synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOLOCYTOCHROME-C-SYNTHASE-RXN","RHEA:22648"],"synonyms":[{"name":"cytochrome c heme-lyase activity","type":"related"},{"name":"cytochrome c synthase activity","type":"related"},{"name":"holocytochrome c synthetase activity","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase (heme-forming)","type":"related"},{"name":"holocytochrome-c apocytochrome-c-lyase activity","type":"related"}],"termid":"GO:0004408","terms_by_termid":{"GO:0004408":null}}


id: GO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation involved in immune response","synonyms":[{"name":"T cell development involved in immune response","type":"related"},{"name":"T cell differentiation during immune response","type":"related"},{"name":"T lymphocyte differentiation during immune response","type":"related"},{"name":"T-cell differentiation during immune response","type":"related"},{"name":"T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002292"}


id: PBO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U","termid":"PBO:0061190"}


id: PBO:0029787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_septated_cell_with_abnormal_morphology","termid":"PBO:0029787"}


id: GO:0033980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphonopyruvate + 2 H+ = CO2 + phosphonoacetaldehyde.","definition_xrefs":["RHEA:20768","EC:4.1.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphonopyruvate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R04053","MetaCyc:4.1.1.82-RXN"],"synonyms":[{"name":"3-phosphonopyruvate carboxy-lyase (2-phosphonoacetaldehyde-forming) activity","type":"related"},{"name":"3-phosphonopyruvate carboxy-lyase activity","type":"related"}],"termid":"GO:0033980"}


id: GO:0071121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to vascular endothelial growth factor D.","definition_xrefs":["PMID:15590642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-VEGF-D complex","synonyms":[{"name":"ITGA9-ITGB1-FIGF complex","type":"narrow"}],"termid":"GO:0071121"}


id: GO:0038166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by angiotensin II binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10977869","GOC:signaling","GOC:nhn","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"cellular response to angiotensin","termid":"GO:1904385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway","synonyms":[{"name":"angiotensin II-mediated signaling pathway","type":"exact"},{"name":"angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0038166"}


id: PBO:0082779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sum1p-Rfm1p-Hst1p complex; Rfm1p tethers the Hst1p histone deacetylase to the DNA-binding protein Sum1p; complex is involved in transcriptional repression of middle sporulation genes and in initiation of DNA replication","termid":"PBO:0082779"}


id: FYPO:0005156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by altered ascus morphology, i.e. the size, shape, or structure of the ascus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascus morphology","termid":"FYPO:0005156"}


id: PBO:0060282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 pseudogene","termid":"PBO:0060282"}


id: PR:000050491
data:
  {"annotation_feature_type":"gene","cv_name":"protein","direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC4B3.15","termid":"PR:000050491"}


id: PBO:0015257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring myosin V regulator Rng9","termid":"PBO:0015257"}


id: PBO:0072375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 1","termid":"PBO:0072375"}


id: GO:0060345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the spleen. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"spleen development","termid":"GO:0048536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spleen trabecula formation","synonyms":[{"name":"spleen trabecula biogenesis","type":"related"},{"name":"spleen trabeculation","type":"exact"}],"termid":"GO:0060345"}


id: GO:0140255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:29414789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"}


id: SO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL9 RNA leader sequence to the 5' end of an mRNA. SL9 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL9_acceptor_site","synonyms":[{"name":"SL9 acceptor site","type":"exact"}],"termid":"SO:0001754"}


id: SO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A consensus AFLP fragment is an AFLP sequence produced from any alignment algorithm which uses assembled multiple AFLP sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_AFLP_fragment","synonyms":[{"name":"consensus AFLP fragment","type":"exact"},{"name":"consensus amplified fragment length polymorphism fragment","type":"exact"}],"termid":"SO:0001991"}


id: GO:0035361
data:
  {"annotated_genes":["SJAG_03728","SJAG_02837","SJAG_04142","SJAG_04971"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78280,93594,95467,107287],"is_not":false,"summary":null,"term":"GO:0035361"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.","definition_xrefs":["GOC:krc","PMID:20139071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02837":null,"SJAG_03728":null,"SJAG_04142":null,"SJAG_04971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035361","terms_by_termid":{"GO:0035361":null}}


id: PATO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000437 sleep pattern value (obsolete PATO:0000437)","termid":"PATO:0000437"}


id: GO:0061766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the lungs.","definition_xrefs":["PMID:22161164","GOC:bc","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung blood pressure","synonyms":[{"name":"positive regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061766"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: PBO:0113348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for initiation of the G0 program; prevents degradation of nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway; phosphorylation (S63) by Rim15p increases interaction with and inhibition of PP2A-Cdc55 for timely mitotic progression; can also activate PP2A-Cdc55 complexes and influence Cdc55p localization along with Igo2p; GFP protein localizes to the cytoplasm and nucleus; IGO1 has a paralog, IGO2, that arose from the whole genome duplication","termid":"PBO:0113348"}


id: GO:0072744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to trichodermin","termid":"GO:1901324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to trichodermin","termid":"GO:0072744"}


id: PBO:0017781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node Gef2-related protein protein Nod1","termid":"PBO:0017781"}


id: GO:0008736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-fucose = L-fuculose.","definition_xrefs":["EC:5.3.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"L-fucose isomerase activity","secondary_identifiers":["MetaCyc:FUCISOM-RXN","RHEA:17233"],"synonyms":[{"name":"L-fucose aldose-ketose-isomerase activity","type":"related"},{"name":"L-fucose ketol-isomerase activity","type":"related"}],"termid":"GO:0008736"}


id: PBO:0076746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 1","termid":"PBO:0076746"}


id: PBO:0063460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor subunit B","termid":"PBO:0063460"}


id: PR:O94718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ipi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein ipi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.06c","synonyms":[{"name":"Spom972h-ipi1","type":"exact"}],"termid":"PR:O94718"}


id: PBO:0061328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B6","termid":"PBO:0061328"}


id: PBO:0026925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026925"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: PBO:0049382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 4","termid":"PBO:0049382"}


id: PBO:0031575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_vegetative_growth","termid":"PBO:0031575"}


id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: CHEBI:16907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitroquinoline N-oxide","termid":"CHEBI:16907"}


id: GO:1902764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"positively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic skeletal joint development","synonyms":[{"name":"activation of embryonic skeletal joint development","type":"narrow"},{"name":"up regulation of embryonic skeletal joint development","type":"exact"},{"name":"up-regulation of embryonic skeletal joint development","type":"exact"},{"name":"upregulation of embryonic skeletal joint development","type":"exact"}],"termid":"GO:1902764"}


id: GO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of septins and associated proteins to form a tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring assembly","termid":"GO:0000921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}


id: PBO:0063306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCGEM1 prostate-specific transcript","termid":"PBO:0063306"}


id: PBO:0055173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2597","termid":"PBO:0055173"}


id: PBO:0046248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 4","termid":"PBO:0046248"}


id: MOD:01552
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01552"}


id: PBO:0089790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACC protein Alp7","termid":"PBO:0089790"}


id: MOD:00286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0281","Unimod:424#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-cysteinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-cystein-S-yl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:00286"}


id: PBO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cek1","termid":"PBO:0005620"}


id: PBO:0067506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 646, pseudogene","termid":"PBO:0067506"}


id: PBO:0074983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-25","termid":"PBO:0074983"}


id: PBO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck1","termid":"PBO:0001517"}


id: GO:0061563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the trigeminal ganglion This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion structural organization","termid":"GO:0061562"},{"relation_name":"part_of","term_name":"trigeminal nerve structural organization","termid":"GO:0021637"},{"relation_name":"part_of","term_name":"trigeminal ganglion morphogenesis","termid":"GO:0061556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion structural organization","synonyms":[{"name":"trigeminal ganglia organization","type":"related"}],"termid":"GO:0061563"}


id: PR:O00091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-6-phosphate 1-dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.18","secondary_identifiers":["UniProtKB:O00091"],"synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3A12.18","type":"related"},{"name":"Spom972h-G6PD","type":"exact"}],"termid":"PR:O00091"}


id: PBO:0084608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YBL103C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBL104C","termid":"PBO:0084608"}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: GO:1902913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16916506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"positively_regulates","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuroepithelial cell differentiation","synonyms":[{"name":"activation of neuroepithelial cell differentiation","type":"narrow"},{"name":"up regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"up-regulation of neuroepithelial cell differentiation","type":"exact"},{"name":"upregulation of neuroepithelial cell differentiation","type":"exact"}],"termid":"GO:1902913"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02226","SJAG_01620","SJAG_02748","SJAG_00331","SJAG_02945","SJAG_00792","SJAG_03715","SJAG_02187","SJAG_06621","SJAG_00757","SJAG_00642","SJAG_02708","SJAG_03903","SJAG_00027","SJAG_02267","SJAG_06622","SJAG_03828","SJAG_02657","SJAG_02135","SJAG_03405","SJAG_01807","SJAG_01419","SJAG_01410","SJAG_02183","SJAG_01587","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100659,84737,93026,87864,96681,96649,88774,95168,102147,112513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[108938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[90171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[105049,105047,105045,105051,107791,105046,105048,105050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[91364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[115012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[87264,91365,114321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[110971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[99536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a small molecule and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"small molecule sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: PR:O14088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.05c gene.","definition_xrefs":["UniProtKB:O14088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C2F3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.05c","synonyms":[{"name":"Spom972h-SPAC2F3.05c","type":"exact"}],"termid":"PR:O14088"}


id: PBO:0064558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation protein","termid":"PBO:0064558"}


id: PBO:0081614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 542, pseudogene","termid":"PBO:0081614"}


id: FYPO:0002198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have abnormal cell shape, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable vegetative cell population with abnormal cell shape (obsolete FYPO:0002198)","synonyms":[{"name":"viable, abnormally shaped vegetative cell population","type":"exact"}],"termid":"FYPO:0002198"}


id: PBO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1 pseudogene 1","termid":"PBO:0048394"}


id: GO:1905293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["PMID:15073157","GO_REF:0000058","GOC:TermGenie","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell differentiation","synonyms":[{"name":"down regulation of neural crest cell differentiation","type":"exact"},{"name":"down-regulation of neural crest cell differentiation","type":"exact"},{"name":"downregulation of neural crest cell differentiation","type":"exact"},{"name":"inhibition of neural crest cell differentiation","type":"narrow"}],"termid":"GO:1905293"}


id: PBO:0080629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 76","termid":"PBO:0080629"}


id: GO:1903619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transdifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22118091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of transdifferentiation","termid":"GO:1903618"},{"relation_name":"negatively_regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transdifferentiation","synonyms":[{"name":"down regulation of transdifferentiation","type":"exact"},{"name":"down-regulation of transdifferentiation","type":"exact"},{"name":"downregulation of transdifferentiation","type":"exact"},{"name":"inhibition of transdifferentiation","type":"narrow"}],"termid":"GO:1903619"}


id: GO:0032881
data:
  {"annotated_genes":["SJAG_00963","SJAG_03705","SJAG_00610","SJAG_04462","SJAG_01787","SJAG_02278","SJAG_04666","SJAG_04771","SJAG_04509","SJAG_04668","SJAG_01376","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87044,77742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[88515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[83657,88519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[84037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[86886,88504,88521,113952,98942,101421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[88525,98944,85565,91043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving polysaccharides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of polysaccharide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032881","terms_by_termid":{"GO:0032951":null,"GO:0045719":null,"GO:0060635":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0080432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 16","termid":"PBO:0080432"}


id: PBO:0046185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 1","termid":"PBO:0046185"}


id: PBO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm2","termid":"PBO:0003515"}


id: PATO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperelliptic","termid":"PATO:0002322"}


id: PBO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035902"}


id: PBO:0031558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_catalytic_activity","termid":"PBO:0031558"}


id: PBO:0083088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein that recognizes oligo(dA).oligo(dT) tracts; Arg side chain in its N-terminal pentad Gly-Arg-Lys-Pro-Gly repeat is required for DNA-binding; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0083088"}


id: PBO:0087448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit k of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; associated only with the dimeric form of ATP synthase","termid":"PBO:0087448"}


id: GO:0102731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol 1,3,4,6-tetrakisphosphate(8-) + ATP = H+ + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate(10-) + ADP.","definition_xrefs":["GOC:pz","EC:2.7.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity","secondary_identifiers":["MetaCyc:RXN-7185"],"termid":"GO:0102731"}


id: GO:0019208
data:
  {"annotated_genes":["SJAG_04968","SJAG_00095","SJAG_04627","SJAG_03309","SJAG_00229","SJAG_02380","SJAG_00534","SJAG_00078","SJAG_03681","SJAG_04871","SJAG_03793","SJAG_03353","SJAG_01901","SJAG_00883","SJAG_00369","SJAG_03272","SJAG_04999","SJAG_01270","SJAG_04638","SJAG_03940","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84864,114616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[114617,103316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[89023,93804,102657,111045,113992,111971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[85507,86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[93805,95684,97372,89024,89075,92431,108824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019888"},{"annotations":[107453,95531,83998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[86090,93966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_00883":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019208","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019211":null,"GO:0019888":null,"GO:0072542":null}}


id: PBO:0075374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 11","termid":"PBO:0075374"}


id: GO:0046377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving colanic acid, a capsular bacterial polysaccharide composed of glucose, galactose, fucose and glucuronic acid residues.","definition_xrefs":["GOC:ai","PMID:35630322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colanic acid metabolic process","synonyms":[{"name":"colanic acid metabolism","type":"exact"}],"termid":"GO:0046377"}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: PBO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt1 (predicted)","termid":"PBO:0004912"}


id: PBO:0078005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 5","termid":"PBO:0078005"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: GO:0033950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the exohydrolysis of 1,4-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"xyloglucan-specific exo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.155-RXN"],"synonyms":[{"name":"Cel74A","type":"related"},{"name":"[(1->6)-alpha-D-xylo]-(1->4)-beta-D-glucan exo-glucohydrolase activity","type":"related"}],"termid":"GO:0033950"}


id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: PBO:0074622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 21","termid":"PBO:0074622"}


id: PBO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb6","termid":"PBO:0005277"}


id: GO:1901567
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to fatty acid derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fatty acid derivative binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901567","terms_by_termid":{"GO:0036042":null}}


id: GO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citrate = cis-aconitate + H2O.","definition_xrefs":["EC:4.2.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete citrate dehydratase activity (obsolete GO:0047780)","synonyms":[{"name":"aconitate hydratase activity","type":"broad"},{"name":"citrate hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate hydro-lyase (cis-aconitate-forming) activity","type":"exact"},{"name":"citrate hydro-lyase activity","type":"broad"}],"termid":"GO:0047780"}


id: PR:O94586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt1 gene.","definition_xrefs":["UniProtKB:O94586","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hit family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.14c","synonyms":[{"name":"Spom972h-hnt1","type":"exact"},{"name":"adenosine 5'-monophosphoramidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94586"}


id: FYPO:0006481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin ssDNA (lagging strand) loading is increased during the mitotic cell cycle. Cohesin ssDNA (lagging strand) loading is the topological linking of a cohesin ring complex to single-stranded DNA, i.e. the lagging strand, in chromatin.","definition_xrefs":["PomBase:mah","GO:0062022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"increased cohesin ssDNA (lagging strand) loading during mitotic cell cycle","type":"exact"},{"name":"increased cohesin ssDNA (lagging strand) loading during vegetative growth","type":"exact"},{"name":"increased mitotic cohesin association with ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased mitotic cohesin localization to ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased second-DNA capture","type":"exact"}],"termid":"FYPO:0006481"}


id: GO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction dependent upon an immune response, typically a response by a mature T or B cell in the periphery resulting tolerance towards an antigen via induction of anergy, cellular deletion, or regulatory T cell activation.","definition_xrefs":["GOC:jal","GO_REF:0000022","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction dependent upon immune response","synonyms":[{"name":"immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002461"}


id: PBO:0068851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 89, pseudogene","termid":"PBO:0068851"}


id: PBO:0052367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 15","termid":"PBO:0052367"}


id: GO:1990624
data:
  {"annotated_genes":["SJAG_02786","SJAG_03629"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88300,93338],"is_not":false,"summary":null,"term":"GO:1990624"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a guanyl nucleotide exchange factor.","definition_xrefs":["GOC:vw","PMID:25635048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02786":null,"SJAG_03629":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"guanyl nucleotide exchange factor inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990624","terms_by_termid":{"GO:1990624":null}}


id: GO:1990860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cyclin dependent kinase (CDK) complex that contains a kinase subunit and a regulatory cyclin subunit. An example of this complex in budding yeast S. cerevisiae consists of the Pho85 kinase and the Pho80 cyclin.","definition_xrefs":["PMID:8108735","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Pho85-Pho80 CDK-cyclin complex","termid":"GO:1990860"}


id: SO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An ISRE is a transcriptional cis regulatory region, containing the consensus region: YAGTTTC(A/T)YTTTYCC, responsible for increased transcription via interferon binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISRE","synonyms":[{"name":"interferon stimulated response element","type":"exact"}],"termid":"SO:0001715"}


id: GO:0033447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"AGA codon-amino acid adaptor activity","synonyms":[{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033447"}


id: PBO:0058775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7109","termid":"PBO:0058775"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: PBO:0051910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha V","termid":"PBO:0051910"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: GO:1904259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:23940118","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of basement membrane organization","termid":"GO:0110011"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix assembly","termid":"GO:1901201"},{"relation_name":"regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"}


id: GO:0034196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an acylglycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An acylglycerol is any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"acylglycerol transport","synonyms":[{"name":"glyceride transport","type":"exact"}],"termid":"GO:0034196"}


id: GO:0018715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + UDP-glucuronate = 9-phenanthryl-beta-D-glucuronide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol UDP-glucuronosyltransferase activity (obsolete GO:0018715)","termid":"GO:0018715"}


id: PBO:0042906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 3","termid":"PBO:0042906"}


id: PR:O13953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mortality factor 4-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein eaf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.12","secondary_identifiers":["UniProtKB:O13953"],"synonyms":[{"name":"ESA1-associated factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC23H4.12","type":"related"},{"name":"Spom972h-MORF4L1","type":"exact"},{"name":"altered polarity protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eaf3","type":"related"}],"termid":"PR:O13953"}


id: PBO:0053387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 314","termid":"PBO:0053387"}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0014297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator (predicted)","termid":"PBO:0014297"}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["GOC:jl","PMID:10074466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: FYPO:0007125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation begins when the mitotic spindle is not present.","definition_xrefs":["PomBase:mah","PMID:9864354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"mitotic sister chromatid separation in absence of mitotic spindle","synonyms":[{"name":"mitotic chromosome separation in absence of mitotic spindle","type":"exact"},{"name":"mitotic sister chromatid separation in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic sister chromatid separation without mitotic spindle","type":"exact"},{"name":"sister chromatid separation in absence of spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007125"}


id: MOD:01824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysTMT6plex-127 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01824"}


id: GO:1903013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22365144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"response to DIF-1","type":"related"},{"name":"response to DIF1","type":"related"}],"termid":"GO:1903013"}


id: GO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzyl cetraxate + H2O = benzyl alcohol + cetraxate + H+.","definition_xrefs":["RHEA:23460","EC:3.1.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cetraxate benzylesterase activity","secondary_identifiers":["KEGG_REACTION:R03612","MetaCyc:CETRAXATE-BENZYLESTERASE-RXN"],"synonyms":[{"name":"cetraxate-benzyl-ester benzylhydrolase activity","type":"related"}],"termid":"GO:0047741"}


id: GO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-3 production","secondary_identifiers":["GO:0045399"],"synonyms":[{"name":"regulation of IL-3 production","type":"exact"},{"name":"regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032672"}


id: PBO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 27","termid":"PBO:0072463"}


id: GO:1902381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 11-oxo-beta-amyrin.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"11-oxo-beta-amyrin metabolic process","synonyms":[{"name":"11-oxo-beta-amyrin metabolism","type":"exact"}],"termid":"GO:1902381"}


id: PR:O14254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NADP], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11822:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NADP], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.08","secondary_identifiers":["UniProtKB:O14254"],"synonyms":[{"name":"IDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"IDP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC6G10.08","type":"related"},{"name":"Spom972h-IDH2nadp","type":"exact"},{"name":"oxalosuccinate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14254"}


id: PBO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal could be generated by overlap of UTRs","termid":"PBO:0000150"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: GO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-carrier-protein biosynthetic process (obsolete GO:0042967)","synonyms":[{"name":"ACP biosynthesis","type":"exact"},{"name":"ACP biosynthetic process","type":"exact"},{"name":"acyl carrier protein biosynthesis","type":"exact"},{"name":"acyl carrier protein biosynthetic process","type":"exact"},{"name":"acyl-carrier protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein anabolism","type":"exact"},{"name":"acyl-carrier-protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein formation","type":"exact"},{"name":"acyl-carrier-protein synthesis","type":"exact"}],"termid":"GO:0042967"}


id: PBO:0053850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1119","termid":"PBO:0053850"}


id: GO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002739","GO:0002742"],"synonyms":[{"name":"regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"regulation of cytokine production during immune response","type":"related"},{"name":"regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002718"}


id: PBO:0027224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_division_timing_change_upon_nitrogen_source_shift","termid":"PBO:0027224"}


id: PBO:0026884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_nitrogen_starvation","termid":"PBO:0026884"}


id: GO:0034865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanoate + CoASH = 2,4,4-trimethylpentanoyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanoate-CoA ligase activity (obsolete GO:0034865)","termid":"GO:0034865"}


id: PBO:0084641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule associated protein; regulates microtubule dynamics; required for accurate meiotic chromosome segregation; null mutant displays large budded cells due to delayed mitotic progression, increased levels of spontaneous Rad52 foci; IRC15 has a paralog, LPD1, that arose from the whole genome duplication","termid":"PBO:0084641"}


id: PR:O13746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16E8.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18","synonyms":[{"name":"Spom972h-SPAC16E8.18","type":"exact"}],"termid":"PR:O13746"}


id: PBO:0061628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 11","termid":"PBO:0061628"}


id: PR:Q9URV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A platelet-activating factor acetylhydrolase 2, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.11c","secondary_identifiers":["UniProtKB:Q9URV1"],"synonyms":[{"name":"1-alkyl-2-acetylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAFAH2","type":"exact"}],"termid":"PR:Q9URV1"}


id: GO:1904799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron remodeling.","definition_xrefs":["PMID:21609829","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"regulates","term_name":"neuron remodeling","termid":"GO:0016322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron remodeling","synonyms":[{"name":"regulation of axon pruning","type":"narrow"},{"name":"regulation of neuron remodelling","type":"exact"},{"name":"regulation of neuronal remodeling","type":"exact"}],"termid":"GO:1904799"}


id: PBO:0058191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4484","termid":"PBO:0058191"}


id: GO:0007530
data:
  {"annotated_genes":["SJAG_05153","SJAG_01419","SJAG_02226","SJAG_02556","SJAG_01410","SJAG_03221","SJAG_00247","SJAG_00399","SJAG_00073","SJAG_01601","SJAG_02724","SJAG_02401","SJAG_01465","SJAG_01113","SJAG_01677","SJAG_01076","SJAG_05239","SJAG_02079","SJAG_03097","SJAG_02319","SJAG_01495","SJAG_02460","SJAG_06638","SJAG_00757","SJAG_02828","SJAG_01068","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84072,95219,112917,114877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[106376,102142,93532,102707,104592,85292,84073,112870,85416,92278,106898,95220,96675,111085,114798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[103130,115117,115118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007531"},{"annotations":[95157,106899,92279,92756,88769,95222,114799,106377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[99049,99324,104593,90185],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89451],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of sexual status of an individual organism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Sex-determination_system"],"termid":"GO:0007530","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: PBO:0048744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 6","termid":"PBO:0048744"}


id: GO:1902616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acyl carnitine is transported across a membrane.","definition_xrefs":["GOC:pr","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl carnitine transport","termid":"GO:0006844"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"acyl carnitine transmembrane transport","synonyms":[{"name":"O-acylcarnitine transmembrane transport","type":"exact"}],"termid":"GO:1902616"}


id: FYPO:0005689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested before cell separation takes place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"},{"relation_name":"is_a","term_name":"binucleate aseptate vegetative cell","termid":"FYPO:0004562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000631","FYPO:0001320","FYPO:0000004","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","synonyms":[{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cytokinetic cell separation","type":"exact"},{"name":"inviable binucleate cell with mitotic cell cycle arrest before septation","type":"related"},{"name":"inviable cell with nuclear division arrest without septation (normal cell length)","type":"exact"},{"name":"lethal; binucleate aseptate cell with mitotic cell cycle arrest before cell separation","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0005689"}


id: PBO:0045932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFHD2 antisense RNA 1","termid":"PBO:0045932"}


id: GO:1903893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["PMID:22013210","GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"positively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"activation of ATF6 branch of UPR","type":"narrow"},{"name":"activation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6-beta UPR branch","type":"narrow"},{"name":"activation of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"activation of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"positive regulation of ATF6 branch of UPR","type":"exact"},{"name":"positive regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"positive regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"positive regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"positive regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up regulation of ATF6 branch of UPR","type":"exact"},{"name":"up regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up-regulation of ATF6 branch of UPR","type":"exact"},{"name":"up-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"upregulation of ATF6 branch of UPR","type":"exact"},{"name":"upregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"upregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"upregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"upregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"upregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903893"}


id: PBO:0091620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase","termid":"PBO:0091620"}


id: CHEBI:29016
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine","termid":"CHEBI:29016"}


id: PBO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensor Fra2","termid":"PBO:0034738"}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: PBO:0054117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1483","termid":"PBO:0054117"}


id: PBO:0059650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 16","termid":"PBO:0059650"}


id: PBO:0064516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit L","termid":"PBO:0064516"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: FYPO:0006791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of lipid droplets.","definition_xrefs":["PMID:30355493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"lipid droplets present in normal numbers","synonyms":[{"name":"lipid droplets present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"lipid droplets present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0006791"}


id: PBO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 9","termid":"PBO:0072120"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PBO:0034180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homology_relationship_with","termid":"PBO:0034180"}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tomatidine UDP-glucosyltransferase activity (obsolete GO:0051509)","termid":"GO:0051509"}


id: PBO:0070874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 5","termid":"PBO:0070874"}


id: PBO:0065577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 2","termid":"PBO:0065577"}


id: PBO:0063102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase","termid":"PBO:0063102"}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: PBO:0028216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0028216"}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: PBO:0086536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; partially overlaps the verified ORF RSF2","termid":"PBO:0086536"}


id: PBO:0051129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-10 (pseudogene)","termid":"PBO:0051129"}


id: PBO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 19","termid":"PBO:0075163"}


id: PBO:0060144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-methyltetrahydrofolate-homocysteine methyltransferase","termid":"PBO:0060144"}


id: PBO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin transmembrane transporter Pmd1","termid":"PBO:0018184"}


id: GO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline metabolic process","synonyms":[{"name":"choline metabolism","type":"exact"}],"termid":"GO:0019695"}


id: PBO:0110503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C (pseudogene)","termid":"PBO:0110503"}


id: PBO:0027879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_H4-K20_trimethylation","termid":"PBO:0027879"}


id: CHEBI:63041
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A manganese coordination entity in which manganese(II) is coordinated to two chloride ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(II) chloride","termid":"CHEBI:63041"}


id: PBO:0041962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 3","termid":"PBO:0041962"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: PR:Q9P7D0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4H10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.19c","synonyms":[{"name":"Spom972h-SPBP4H10.19c","type":"exact"}],"termid":"PR:Q9P7D0"}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: GO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Replication of circular DNA following excision from the chromosome; replication of extrachromosomal circular DNA generally occurs independently of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:33867825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"replication of extrachromosomal circular DNA","termid":"GO:0001326"}


id: GO:1990676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the trans portion of the Golgi complex.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna membrane","termid":"GO:0032580"},{"relation_name":"part_of","term_name":"Golgi trans cisterna","termid":"GO:0000138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi trans cisterna membrane","synonyms":[{"name":"trans-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990676"}


id: PBO:0084565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane glycoprotein v-SNARE; involved in retrograde transport from the Golgi to the endoplasmic reticulum (ER); required for N- and O-glycosylation in the Golgi but not in the ER and for efficient nuclear fusion during mating; mediates Sey1p-independent homotypic ER fusion; interacts with the Dsl1p complex through Tip20p","termid":"PBO:0084565"}


id: PATO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the rear of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised posteriorly","termid":"PATO:0001922"}


id: GO:0075606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus. The process begins after viral entry, and ends when the viral material is at the nuclear membrane.","definition_xrefs":["GOC:bf","VZ:990","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of viral material towards nucleus","synonyms":[{"name":"cytoplasmic inwards viral transport","type":"exact"},{"name":"transport of viral material to nucleus","type":"exact"},{"name":"viral genome transport to host cell nucleus","type":"exact"}],"termid":"GO:0075606"}


id: PBO:0084261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein, regulates phospholipid metabolism; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane (PM) and regulate PI4P levels by controlling access of Sac1p phosphatase to substrate PI4P in the PM; interacts with FFAT motifs in Opi1p, Swh1p, Osh2p, and Osh3p; involved in telomeric silencing; VAP homolog; SCS2 has a paralog, SCS22, that arose from the whole genome duplication","termid":"PBO:0084261"}


id: PR:Q09856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14212:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U5/U6 small nuclear ribonucleoprotein prp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.02","secondary_identifiers":["UniProtKB:Q09856"],"synonyms":[{"name":"SPAC29E6.02","type":"related"},{"name":"Spom972h-PRPF3","type":"exact"},{"name":"pre-mRNA-splicing factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09856"}


id: GO:0005543
data:
  {"annotated_genes":["SJAG_01769","SJAG_00663","SJAG_01783","SJAG_00268","SJAG_03250","SJAG_03405","SJAG_03847","SJAG_00907","SJAG_04024","SJAG_04010","SJAG_01722","SJAG_02492","SJAG_01564","SJAG_02657","SJAG_01382","SJAG_04219","SJAG_01748","SJAG_02177","SJAG_04221","SJAG_00724","SJAG_01324","SJAG_00314","SJAG_02414","SJAG_05179","SJAG_01863","SJAG_00152","SJAG_02728","SJAG_01516","SJAG_02248","SJAG_00821","SJAG_01143","SJAG_00946","SJAG_05245","SJAG_04600","SJAG_00216","SJAG_02468","SJAG_03596","SJAG_00638","SJAG_00118","SJAG_04960","SJAG_04644","SJAG_01437","SJAG_03970","SJAG_02274","SJAG_01945","SJAG_02989","SJAG_00467","SJAG_04417","SJAG_04413","SJAG_04275","SJAG_02902","SJAG_04001","SJAG_02852","SJAG_02392","SJAG_03851","SJAG_03563","SJAG_01229","SJAG_01309","SJAG_00173","SJAG_00117","SJAG_00115","SJAG_02587","SJAG_16459","SJAG_01519","SJAG_03593","SJAG_01135","SJAG_00971","SJAG_04963","SJAG_02572","SJAG_02912","SJAG_00368","SJAG_03756","SJAG_01794","SJAG_00970","SJAG_04077","SJAG_02166"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84233,87823,87947,88685,91086,92520,97884,98527,99364,100144,100384,101490,102817,104774,108386,114718,114983,115013],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[104288,102101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[102667,102284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901612"},{"annotations":[102671,102286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070300"},{"annotations":[111817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[109726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008429"},{"annotations":[62339,108940,97815,88388,89582,111271,93559,104821,113603,115055,103452,95076,99531,101052,114039,103714,110840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035091"},{"annotations":[91962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[84202,98524,113518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[94708,96384,95423,93712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[100913,94709,108535,104734,87609,86696,95797,95933,106070,111291,95934,96385,93713,97810,105722,105871,92037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[115011,95387,97866,97856,114543,85742,102672,102102,110951,113102,84134,95424,98017,86866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[94816,96218,95388,108575,90614,98525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"},{"annotations":[84135,98526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid 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binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005543","terms_by_termid":{"GO:0001786":null,"GO:0005543":null,"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0008429":null,"GO:0031210":null,"GO:0032266":null,"GO:0035091":null,"GO:0070273":null,"GO:0070300":null,"GO:0080025":null,"GO:1901612":null,"GO:1901981":null}}


id: PBO:0088773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8","termid":"PBO:0088773"}


id: GO:1990224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide (NMN-) + H2O = beta-nicotinamide D-riboside (nicotinamide ribose, NmR) + phosphate.","definition_xrefs":["GOC:rb","PMID:21349851","RHEA:30815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NMN phosphatase activity","synonyms":[{"name":"beta-nicotinamide D-ribonucleotide phosphatase activity","type":"exact"},{"name":"nicotinamide mononucleotide phosphatase activity","type":"exact"}],"termid":"GO:1990224"}


id: GO:1903861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite extension.","definition_xrefs":["PMID:24898855","GOC:pad","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"positively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite extension","synonyms":[{"name":"activation of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite extension","type":"exact"},{"name":"up-regulation of dendrite extension","type":"exact"},{"name":"upregulation of dendrite extension","type":"exact"}],"termid":"GO:1903861"}


id: PATO:0000791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000791 immune function value (obsolete PATO:0000791)","termid":"PATO:0000791"}


id: GO:0033778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7alpha-hydroxycholest-4-en-3-one + H+ + NADPH + O2 = 7alpha,12alpha-dihydroxycholest-4-en-3-one + H2O + NADP+.","definition_xrefs":["PMID:10051404","PMID:1400444","RHEA:46752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol 12-alpha-hydroxylase activity","termid":"GO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7alpha-hydroxycholest-4-en-3-one 12alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192157","Reactome:R-HSA-193709","Reactome:R-HSA-193845","KEGG_REACTION:R04826","MetaCyc:1.14.13.95-RXN"],"synonyms":[{"name":"7alpha-hydroxy-4-cholesten-3-one 12alpha-monooxygenase activity","type":"related"}],"termid":"GO:0033778"}


id: GO:0002276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a basophil resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the basophil has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"basophil activation","termid":"GO:0045575"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil activation involved in immune response","synonyms":[{"name":"basophil activation during immune response","type":"related"}],"termid":"GO:0002276"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: PBO:0043569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VI alpha 6 chain","termid":"PBO:0043569"}


id: FYPO:0001030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dithiothreitol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on dithiothreitol","synonyms":[{"name":"normal cell population growth in presence of dithiothreitol","type":"exact"},{"name":"normal cell population growth on 1,4-dithiothreitol","type":"exact"},{"name":"normal cell population growth on DTT","type":"exact"},{"name":"normal cell population growth on dithiothreitol","type":"exact"},{"name":"normal cellular response to dithiothreitol","type":"related"},{"name":"normal vegetative cell population growth on dithiothreitol","type":"exact"}],"termid":"FYPO:0001030"}


id: GO:0046557
data:
  {"annotated_genes":["SJAG_05001","SJAG_01171","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98046,98047,104152],"is_not":false,"summary":null,"term":"GO:0046557"}]},"cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->6) linkages in (1->6)-beta-D-glucans.","definition_xrefs":["EC:3.2.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01171":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"glucan endo-1,6-beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.75-RXN"],"synonyms":[{"name":"1,6-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan 6-glucanohydrolase activity","type":"related"},{"name":"beta-1,6-glucan hydrolase activity","type":"related"},{"name":"beta-1,6-glucanase activity","type":"related"},{"name":"beta-1,6-glucanase-pustulanase activity","type":"related"},{"name":"beta-1->6-glucan hydrolase activity","type":"related"},{"name":"endo-(1,6)-beta-D-glucanase activity","type":"exact"},{"name":"endo-(1->6)-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-D-glucanase activity","type":"related"},{"name":"endo-1,6-beta-glucanase activity","type":"related"},{"name":"endo-beta-1,6-glucanase activity","type":"related"}],"termid":"GO:0046557","terms_by_termid":{"GO:0046557":null}}


id: SO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including D-J-region with 5' UTR and 3' UTR, also designated as D-J-segment.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_gene_segment","synonyms":[{"name":"D-J-GENE","type":"exact"},{"name":"DJ gene","type":"exact"}],"termid":"SO:0000572"}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: GO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["GOC:add","PMID:2757794","PMID:12077222","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"diacyl lipopeptide binding","synonyms":[{"name":"bacterial diacyl lipopeptide binding","type":"narrow"},{"name":"bacterial diacyl lipoprotein binding","type":"related"},{"name":"diacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042498"}


id: PBO:0057179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 330","termid":"PBO:0057179"}


id: PBO:0074458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 3","termid":"PBO:0074458"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: GO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of an animal organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ axis polarity","termid":"GO:0010084"}


id: PBO:0004623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate kinase (predicted)","termid":"PBO:0004623"}


id: GO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compact cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular compact myocardium morphogenesis","termid":"GO:0003223"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: GO:0005029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete CD27 receptor activity (obsolete GO:0005029)","synonyms":[{"name":"CD27 receptor activity","type":"exact"}],"termid":"GO:0005029"}


id: PATO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001091 relative elasticity value (obsolete PATO:0001091)","termid":"PATO:0001091"}


id: PBO:0085777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein needed for ER membrane biosynthesis in response to ER stress; member of the highly conserved FIT family of proteins involved in triglyceride droplet biosynthesis; homologous to human FIT2/FITM2, a fatty acyl-CoA diphosphatase; interacts with Sst2p and Hsp82p in high-throughput two-hybrid screens","termid":"PBO:0085777"}


id: GO:0140779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of XCL1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:7973732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"XCL1 production","secondary_identifiers":["Wikipedia:XCL1"],"synonyms":[{"name":"lymphotactin production","type":"exact"}],"termid":"GO:0140779"}


id: GO:0016737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_00197","SJAG_00444","SJAG_00533","SJAG_05024","SJAG_00694","SJAG_04709","SJAG_00964","SJAG_04354","SJAG_00779","SJAG_03708","SJAG_00412","SJAG_03164","SJAG_04713","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[94600,107990,112790,85577,89515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[111636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89062,110979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[111637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[88071,83605,84592,89063,110981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[89518,102591,96170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00412":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: PBO:0091458
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YNG2","termid":"PBO:0091458"}


id: PBO:0090083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn5","termid":"PBO:0090083"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: PBO:0081251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF22 antisense RNA 1","termid":"PBO:0081251"}


id: PBO:0040440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP8B1 antisense RNA 1","termid":"PBO:0040440"}


id: PBO:0036388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AIG1 and ADTRP ortholog","termid":"PBO:0036388"}


id: PBO:0078100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 8","termid":"PBO:0078100"}


id: GO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"positively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of homocysteine metabolic process","synonyms":[{"name":"activation of homocysteine metabolic process","type":"narrow"},{"name":"positive regulation of Hcy metabolic process","type":"exact"},{"name":"positive regulation of Hcy metabolism","type":"exact"},{"name":"positive regulation of homocysteine metabolism","type":"exact"},{"name":"stimulation of homocysteine metabolic process","type":"narrow"},{"name":"up regulation of homocysteine metabolic process","type":"exact"},{"name":"up-regulation of homocysteine metabolic process","type":"exact"},{"name":"upregulation of homocysteine metabolic process","type":"exact"}],"termid":"GO:0050668"}


id: PBO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, ribosomal subunit L35 (predicted)","termid":"PBO:0003602"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: PBO:0065155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5 pseudogene 1","termid":"PBO:0065155"}


id: PBO:0082419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional inositol pyrophosphate kinase and phosphatase; contains an N-terminal PP-InsP kinase domain that phosphorylates inositol hexakisphosphate and heptakisphosphate, and a C-terminal phosphatase domain that hydrolyzes both 1PP-InsP5 and 5PP-InsP5; IP7 levels decrease during starvation, suggesting a role for PP-InsP enzymes in Pi homeostasis; may regulate the dimorphic switch and the function of the cortical actin cytoskeleton","termid":"PBO:0082419"}


id: PR:Q9P381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13A2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.03","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-DG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC13A2.03","type":"exact"}],"termid":"PR:Q9P381"}


id: PR:O60187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom972h-sid4","type":"exact"}],"termid":"PR:O60187"}


id: PBO:0041989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 33","termid":"PBO:0041989"}


id: GO:1905618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:PARL","PMID:23409027","GOC:TermGenie","GO_REF:0000058","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905618)","synonyms":[{"name":"upregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"activation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"activation of miRNA mediated inhibition of translation","type":"narrow"},{"name":"activation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"activation of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"positive regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"positive regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"positive regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"positive regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"positive regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"positive regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"up-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"up-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"up-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"up-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"up-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"up-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"upregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"upregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"upregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"upregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"upregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905618"}


id: PBO:0054030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1361","termid":"PBO:0054030"}


id: PBO:0073782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 4","termid":"PBO:0073782"}


id: PBO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase (predicted)","termid":"PBO:0000964"}


id: CHEBI:43732
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiazole","termid":"CHEBI:43732"}


id: PBO:0053278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B4","termid":"PBO:0053278"}


id: PBO:0067007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 14, pseudogene","termid":"PBO:0067007"}


id: GO:0000056
data:
  {"annotated_genes":["SJAG_01358","SJAG_01338","SJAG_02250","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87189,93179,95913,99093],"is_not":false,"summary":null,"term":"GO:0000056"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01338":null,"SJAG_01358":null,"SJAG_02250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0008150","GO:0006810","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"ribosomal small subunit export from nucleus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000058"],"synonyms":[{"name":"30S ribosomal subunit export from nucleus","type":"narrow"},{"name":"40S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"ribosomal small subunit export out of nucleus","type":"exact"},{"name":"ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:0000056","terms_by_termid":{"GO:0000056":null}}


id: GO:0018997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer carrier (obsolete GO:0018997)","synonyms":[{"name":"electron transfer carrier","type":"exact"}],"termid":"GO:0018997"}


id: GO:0070421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III and XRCC1, and is involved in base excision repair.","definition_xrefs":["PMID:15141024","PMID:7760816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"DNA ligase III-XRCC1 complex","termid":"GO:0070421"}


id: PBO:0048016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMPD3 antisense RNA 1","termid":"PBO:0048016"}


id: PATO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's consisting of keratin.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinous","termid":"PATO:0002507"}


id: PBO:0088280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6 Pam1","termid":"PBO:0088280"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04369","PANTHER:PTHR13889:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: PBO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 19","termid":"PBO:0045829"}


id: PBO:0074615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 16B","termid":"PBO:0074615"}


id: GO:0042997
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84229],"is_not":false,"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"negatively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of Golgi to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"down-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"downregulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"inhibition of Golgi to plasma membrane protein transport","type":"narrow"}],"termid":"GO:0042997","terms_by_termid":{"GO:0042997":null}}


id: PBO:0088622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase","termid":"PBO:0088622"}


id: GO:0160005
data:
  {"annotated_genes":["SJAG_05414","SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87348,104476],"is_not":false,"summary":null,"term":"GO:0160005"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the correct folding of multipass membrane proteins in the ER membrane. In human, the substrate-binding Asterix (PAT10, WDR83OS) forms an obligate heterodimer with CCDC47.","definition_xrefs":["PMID:33082068","PMID:33960686","PMID:32814900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03930":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"PAT complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160005","terms_by_termid":{"GO:0160005":null}}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["UniProtKB:Q10412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: PBO:0055509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2943","termid":"PBO:0055509"}


id: PBO:0042472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB domain containing protein 1","termid":"PBO:0042472"}


id: GO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuromedin B receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuromedin B receptor binding","synonyms":[{"name":"neuromedin B receptor ligand","type":"narrow"}],"termid":"GO:0031710"}


id: PBO:0055954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 66","termid":"PBO:0055954"}


id: PBO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue3 (predicted)","termid":"PBO:0005728"}


id: FYPO:0002185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and tapered cells (obsolete FYPO:0002185)","synonyms":[{"name":"inviable mixed population including germinated spores and bottle/skittle cells","type":"related"},{"name":"inviable mixed population including germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002185"}


id: GO:0048567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ectodermal digestive tract are generated and organized. The ectodermal digestive tract includes those portions of the digestive tract that are derived from ectoderm.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract morphogenesis","synonyms":[{"name":"ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048567"}


id: PBO:0072872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB homeobox 2","termid":"PBO:0072872"}


id: PBO:0091066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3, found in association with TRAMP complex","termid":"PBO:0091066"}


id: GO:0015115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of silicates from one side of a membrane to the other. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"silicate transmembrane transporter activity","termid":"GO:0015115"}


id: FYPO:0002513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased protein palmitoylation during meiosis","synonyms":[{"name":"increased protein palmitoylation during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002513"}


id: FYPO:0000058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondrial nucleoids than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mitochondrial nucleoids present in decreased numbers","synonyms":[{"name":"decreased number of mitochondrial nucleoids","type":"exact"},{"name":"fewer mitochondrial nucleoids present","type":"exact"},{"name":"mitochondrial nucleoid decreased number","type":"exact"},{"name":"mitochondrial nucleoids present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondrial nucleoids present in decreased numbers during vegetative growth","type":"exact"},{"name":"mitochondrial nucleoids present in reduced numbers","type":"exact"}],"termid":"FYPO:0000058"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: FYPO:0001462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered cellular calcium level","synonyms":[{"name":"abnormal cellular calcium accumulation","type":"related"},{"name":"abnormal cellular calcium level","type":"exact"},{"name":"altered cellular calcium ion level","type":"exact"},{"name":"altered cellular calcium level during mitotic cell cycle","type":"related"},{"name":"altered cellular calcium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001462"}


id: GO:1990536
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89434,108334],"is_not":false,"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into the Golgi lumen across the Golgi membrane.","definition_xrefs":["PMID:25195688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transport","termid":"GO:0089722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990536","terms_by_termid":{"GO:1990536":null}}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: PBO:0069625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 902, pseudogene","termid":"PBO:0069625"}


id: PR:O14367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transport inducer 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.01c","synonyms":[{"name":"Spom972h-gti1","type":"exact"}],"termid":"PR:O14367"}


id: CHEBI:23414
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal sulfate compound having copper(2+) as the counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(2+) sulfate","termid":"CHEBI:23414"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: GO:0032075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclease activity","synonyms":[{"name":"activation of nuclease activity","type":"narrow"},{"name":"nuclease activator","type":"related"},{"name":"stimulation of nuclease activity","type":"narrow"},{"name":"up regulation of nuclease activity","type":"exact"},{"name":"up-regulation of nuclease activity","type":"exact"},{"name":"upregulation of nuclease activity","type":"exact"}],"termid":"GO:0032075"}


id: PBO:0087978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNAHis guanylyltransferase; adds a guanosine residue to the 5' end of tRNAH is after transcription and RNase P cleavage; can also catalyze reverse (3'-5') polymerization with certain substrates in a template-dependent reaction; couples nuclear division and migration to cell budding and cytokinesis; essential enzyme conserved among eukaryotes","termid":"PBO:0087978"}


id: PATO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diploidy quality inhering in a bearer in by virtue of belonging in a species whose one of the sexes has haploid cells and the other has diploid cells.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Haplodiploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diploid","termid":"PATO:0001394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplodiploid","termid":"PATO:0001395"}


id: FYPO:0002442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell division site","synonyms":[{"name":"normal protein localisation to cell division site","type":"exact"},{"name":"normal protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0002442"}


id: PR:O43088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rba50 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II-associated protein rba50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.13","synonyms":[{"name":"Spom972h-rba50","type":"exact"}],"termid":"PR:O43088"}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: GO:0051784
data:
  {"annotated_genes":["SJAG_03353","SJAG_04259","SJAG_00364","SJAG_02336","SJAG_04999","SJAG_04287","SJAG_04884","SJAG_01330","SJAG_03126","SJAG_01679","SJAG_01837","SJAG_04699","SJAG_03529","SJAG_01680","SJAG_03681","SJAG_03327","SJAG_00883","SJAG_01082","SJAG_00266","SJAG_02169","SJAG_03438","SJAG_01297","SJAG_04126","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99992,108035,104333,95682,110338,103311,109857,86838,111966],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102390,110564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[85189,102689,76907,110328,112129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[102392,112743,86840,97892,110567,95530,105986,111615,109861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111616,102393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90305],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[104050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109862],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112747],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[97430],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of nuclear division","termid":"GO:0051783"},{"relation_name":"negatively_regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear division","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nuclear division","type":"exact"},{"name":"down-regulation of nuclear division","type":"exact"},{"name":"downregulation of nuclear division","type":"exact"},{"name":"inhibition of nuclear division","type":"narrow"}],"termid":"GO:0051784","terms_by_termid":{"GO:0007094":null,"GO:0045128":null,"GO:0045841":null,"GO:0051598":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0077999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 3","termid":"PBO:0077999"}


id: GO:0035046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the male and female pronuclei towards each other prior to their fusion.","definition_xrefs":["GOC:bf","PMID:9199363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pronuclear migration","termid":"GO:0035046"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: PATO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000887 relative litter size value (obsolete PATO:0000887)","termid":"PATO:0000887"}


id: PBO:0087442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0087442"}


id: PBO:0057592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 921","termid":"PBO:0057592"}


id: GO:0097400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ic","PMID:21602493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-17","termid":"GO:0097398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-17-mediated signaling pathway","synonyms":[{"name":"IL-17-mediated signaling pathway","type":"exact"},{"name":"IL-17-mediated signalling pathway","type":"exact"},{"name":"interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:0097400"}


id: PR:O74420
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf13 gene.","definition_xrefs":["UniProtKB:O74420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.04c","synonyms":[{"name":"Spom972h-wtf13","type":"exact"}],"termid":"PR:O74420"}


id: GO:1902860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionyl-CoA.","definition_xrefs":["PMID:15514053","GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"propionyl-CoA metabolic process","termid":"GO:1902858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006629","GO:0006790"],"is_obsolete":false,"name":"propionyl-CoA biosynthetic process","synonyms":[{"name":"propionyl-CoA anabolism","type":"exact"},{"name":"propionyl-CoA biosynthesis","type":"exact"},{"name":"propionyl-CoA formation","type":"exact"},{"name":"propionyl-CoA synthesis","type":"exact"}],"termid":"GO:1902860"}


id: GO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroxymonodemethylisoproturon + H2O = formaldehyde + 4'-(2-hydroxyisopropyl)phenylurea + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0894"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroxymonomethylisoproturon dimethylaminedehydrogenase activity (obsolete GO:0034570)","termid":"GO:0034570"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04340","PANTHER:PTHR23427:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: PATO:0001050
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001050 relative susceptibility (obsolete PATO:0001050)","termid":"PATO:0001050"}


id: PBO:0087148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype","termid":"PBO:0087148"}


id: GO:1902162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"regulates","term_name":"DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator","termid":"GO:1902162"}


id: GO:0089718
data:
  {"annotated_genes":["SJAG_04637","SJAG_02605","SJAG_00991","SJAG_03591","SJAG_03970","SJAG_05346","SJAG_04718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[96459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[84230],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[106617,89425,87842,94974],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[94975,89426,87843],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[89427],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[96451,97310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"}]},"cv_name":"biological_process","definition":"The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"amino acid import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043092","GO:0044745","GO:1902837"],"synonyms":[{"name":"L-amino acid import","type":"broad"},{"name":"L-amino acid uptake","type":"narrow"},{"name":"amino acid import into cell","type":"exact"},{"name":"amino acid transmembrane import","type":"broad"}],"termid":"GO:0089718","terms_by_termid":{"GO:0097638":null,"GO:0097639":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null}}


id: PBO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion associated, oncogene regulated","termid":"PBO:0042582"}


id: PBO:0054276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1666","termid":"PBO:0054276"}


id: PBO:0005199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIE beta subunit, TFIIEB, Tfa2","termid":"PBO:0005199"}


id: PBO:0054570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1972","termid":"PBO:0054570"}


id: PBO:0087469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p from the endosome to the plasma membrane; involved in phosphate transport and telomeric chromatin silencing; activated by the the Iml1p (GAP) subunit of the SEACIT complex; similar to human RagA and RagB","termid":"PBO:0087469"}


id: GO:0006786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme c, a derivative of heme found in cytochromes c, b4, and f.","definition_xrefs":["PubChem_Compound:122208","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme biosynthetic process","termid":"GO:0006783"},{"relation_name":"is_a","term_name":"heme C metabolic process","termid":"GO:0046162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme C biosynthetic process","synonyms":[{"name":"heme C formation","type":"exact"},{"name":"heme C synthesis","type":"exact"},{"name":"haem C biosynthesis","type":"exact"},{"name":"haem C biosynthetic process","type":"exact"},{"name":"heme C anabolism","type":"exact"},{"name":"heme C biosynthesis","type":"exact"}],"termid":"GO:0006786"}


id: SO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded DNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_sequence_secondary_structure","synonyms":[{"name":"DNA sequence secondary structure","type":"exact"}],"termid":"SO:0000142"}


id: GO:0080130
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94453],"is_not":false,"summary":null,"term":"GO:0080130"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2-oxoglutarate = 3-phenylpyruvate + L-glutamate.","definition_xrefs":["PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:25152","EC:2.6.1.57","MetaCyc:RXN-10814","KEGG_REACTION:R00694"],"synonyms":[{"name":"L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080130","terms_by_termid":{"GO:0080130":null}}


id: SO:0001141
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three consecutive residues and one H-bond in which: residue(i) is Serine (S) or Threonine (T), the side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_turn_motif","termid":"SO:0001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_turn","secondary_identifiers":["BS:00231"],"synonyms":[{"name":"serine/threonine turn","type":"exact"},{"name":"st_turn","type":"exact"}],"termid":"SO:0001141"}


id: PBO:0084250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in the de novo synthesis of GTP; member of a four-gene family in S. cerevisiae, constitutively expressed; IMD4 has a paralog, IMD3, that arose from the whole genome duplication","termid":"PBO:0084250"}


id: GO:0034266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the cytokinin 6-isopentenyladenine.","definition_xrefs":["GOC:mah","PMID:18216168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin catabolic process","termid":"GO:0009823"},{"relation_name":"is_a","term_name":"isopentenyl adenine metabolic process","termid":"GO:0034264"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenyl adenine catabolic process","synonyms":[{"name":"isopentenyl adenine breakdown","type":"exact"},{"name":"isopentenyl adenine catabolism","type":"exact"},{"name":"isopentenyl adenine degradation","type":"exact"},{"name":"isopentenyladenine catabolic process","type":"exact"}],"termid":"GO:0034266"}


id: GO:0044642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, alternative pathway in another organism (obsolete GO:0044642)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044642"}


id: GO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing, a protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"regulation of protein processing","secondary_identifiers":["GO:0010953"],"synonyms":[{"name":"regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0070613"}


id: PBO:0076441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13","termid":"PBO:0076441"}


id: GO:1990115
data:
  {"annotated_genes":["SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102557,114099],"is_not":false,"summary":null,"term":"GO:1990115"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase III complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase III assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase III complex assembly","type":"exact"},{"name":"RNA Polymerase III complex assembly","type":"exact"}],"termid":"GO:1990115","terms_by_termid":{"GO:1990115":null}}


id: PBO:0058593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-4","termid":"PBO:0058593"}


id: PR:O94523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.06c","synonyms":[{"name":"Spom972h-SPCC1281.06c","type":"exact"},{"name":"delta(9)-desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-9 desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"fatty acid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"stearoyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94523"}


id: FYPO:0007204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an rDNA spacer replication fork barrier by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-stranded DNA binding","termid":"FYPO:0007543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"abolished rDNA spacer replication fork barrier binding","synonyms":[{"name":"abolished DNA binding at rDNA spacer replication fork barrier","type":"exact"}],"termid":"FYPO:0007204"}


id: GO:0140270
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88587],"is_not":false,"summary":null,"term":"GO:0140270"}]},"cv_name":"biological_process","definition":"The directed movement of gluconate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate transmembrane transport","termid":"GO:0035429"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gluconate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140270","terms_by_termid":{"GO:0140270":null}}


id: PBO:0027845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027845"}


id: PBO:0038722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 17","termid":"PBO:0038722"}


id: PBO:0113193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy; involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); role in preventing L-A mycovirus pathogenesis; encodes ortholog of mammalian endoG","termid":"PBO:0113193"}


id: PBO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-70D","termid":"PBO:0051132"}


id: PBO:0029458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vacuolar_morphology","termid":"PBO:0029458"}


id: PATO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green","termid":"PATO:0000320"}


id: PR:O60105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylosuccinate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04018","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.09c","secondary_identifiers":["UniProtKB:O60105"],"synonyms":[{"name":"ASL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ASase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Adenylosuccinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ADSL","type":"exact"}],"termid":"PR:O60105"}


id: GO:0007518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a myoblast regardless of its environment; upon determination, the cell fate cannot be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate determination","termid":"GO:0007518"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"pole cell migration","type":"narrow"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: GO:1990667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the serine protease PCSK9 (proprotein convertase subtilisin/kexin-9) and annexin A2 (AnxA2).","definition_xrefs":["GOC:BHF","PMID:22848640","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PCSK9-AnxA2 complex","synonyms":[{"name":"PCSK9-Annexin A2 complex","type":"exact"},{"name":"PCSK9.AnxA2 complex","type":"exact"},{"name":"PCSK9:ANXA2 complex","type":"exact"}],"termid":"GO:1990667"}


id: GO:0034886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-aminovinylacetate + H2O = succinic semialdehyde + NH3.","definition_xrefs":["UM-BBD_reactionID:r1351"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-aminovinylacetate deaminase activity (obsolete GO:0034886)","termid":"GO:0034886"}


id: GO:0046274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignin catabolic process","synonyms":[{"name":"lignin breakdown","type":"exact"},{"name":"lignin catabolism","type":"exact"},{"name":"lignin degradation","type":"exact"}],"termid":"GO:0046274"}


id: PBO:0062064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 2","termid":"PBO:0062064"}


id: FYPO:0000321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores and germinated spores that fail to divide.","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and undivided germinated spores (obsolete FYPO:0000321)","termid":"FYPO:0000321"}


id: PR:Q9USM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.12c","synonyms":[{"name":"SPCC16A11.12c","type":"related"},{"name":"Spom972h-ubp1","type":"exact"},{"name":"deubiquitinating enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"ubiquitin thioesterase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USM5"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: GO:0015860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a purine nucleoside is transported across a membrane. A purine nucleoside is a purine base covalently bonded to a ribose or deoxyribose sugar.","definition_xrefs":["GOC:vw","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleoside transmembrane transport","termid":"GO:1901642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"purine nucleoside transmembrane transport","secondary_identifiers":["GO:0035427"],"synonyms":[{"name":"purine nucleoside membrane transport","type":"exact"},{"name":"purine nucleoside transport","type":"broad"}],"termid":"GO:0015860"}


id: PR:O13749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01474","PANTHER:PTHR11618:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIB (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.16","secondary_identifiers":["UniProtKB:O13749"],"synonyms":[{"name":"Spom972h-GTF2B","type":"exact"},{"name":"general transcription factor TFIIB (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13749"}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: GO:0097346
data:
  {"annotated_genes":["SJAG_00873","SJAG_04989","SJAG_00746","SJAG_02466","SJAG_03145","SJAG_05020","SJAG_03694","SJAG_01611","SJAG_02571","SJAG_03036","SJAG_02500","SJAG_02303","SJAG_04596","SJAG_04355","SJAG_05192","SJAG_00735","SJAG_02385","SJAG_04097","SJAG_00045","SJAG_03579","SJAG_02798","SJAG_05282","SJAG_02549","SJAG_02990","SJAG_03033","SJAG_01465","SJAG_01016","SJAG_02872","SJAG_03839"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105135,97652,97781,110289,85004,90224,111458,95236,83945,89605,105653,91575,109222,90110,88889,95484,108312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[92753,109392,86808,84122,113504,88471,94337,109225,95058,103960,97785,108316,113324,110780,97070,105143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A chromatin remodeling protein complex initially purified from S. cerevisiae and containing more than 10 subunits, including the SWR1-related complexes. INO80 (inositol requiring 80)-type complexes have diverse functions, including promoting transcriptional activation and DNA repair.","definition_xrefs":["GOC:rb","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00735":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_01016":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03839":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"INO80-type complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097346","terms_by_termid":{"GO:0000812":null,"GO:0031011":null}}


id: PBO:0044503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich transmembrane module containing 1","termid":"PBO:0044503"}


id: PBO:0053653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 706","termid":"PBO:0053653"}


id: PBO:0066718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 15","termid":"PBO:0066718"}


id: GO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become an inner ear receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell fate commitment","synonyms":[{"name":"inner ear hair cell fate commitment","type":"exact"}],"termid":"GO:0060120"}


id: PR:Q9P7E9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C14C4.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.15c","synonyms":[{"name":"Spom972h-SPAC14C4.15c","type":"exact"}],"termid":"PR:Q9P7E9"}


id: PBO:0068553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 4, pseudogene","termid":"PBO:0068553"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_00792","SJAG_04607","SJAG_04031","SJAG_02834","SJAG_04867","SJAG_02457","SJAG_04743","SJAG_03862","SJAG_00802","SJAG_04677","SJAG_01694","SJAG_00822","SJAG_02735","SJAG_02474","SJAG_00532","SJAG_01004","SJAG_04675","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73816,85396,88404,89054,90164,92385,96579,100353,103494,109954],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[96578,99887,90209,88551,90217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[99896],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[99889,108871,88548,88552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[106861,61330,61613,106862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null}}


id: PBO:0082854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of the signal recognition particle (SRP) complex; SRP complex functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082854"}


id: PBO:0067198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 262, pseudogene","termid":"PBO:0067198"}


id: PBO:0038651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 1","termid":"PBO:0038651"}


id: PBO:0074309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD1 antisense RNA 2","termid":"PBO:0074309"}


id: PBO:0071995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 24","termid":"PBO:0071995"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PBO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 2","termid":"PBO:0052623"}


id: GO:1905576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GT1b.","definition_xrefs":["GOC:TermGenie","PMID:1454804","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ganglioside GT1b binding","termid":"GO:1905576"}


id: GO:0048156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tau protein binding","termid":"GO:0048156"}


id: GO:0008986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + pyruvate = AMP + 3 H+ + phosphate + phosphoenolpyruvate.","definition_xrefs":["RHEA:11364","EC:2.7.9.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"pyruvate, water dikinase activity","secondary_identifiers":["KEGG_REACTION:R00199","MetaCyc:PEPSYNTH-RXN"],"synonyms":[{"name":"ATP:pyruvate, water phosphotransferase activity","type":"related"},{"name":"PEP synthase activity","type":"exact"},{"name":"PEP synthetase activity","type":"related"},{"name":"phoephoenolpyruvate synthetase activity","type":"related"},{"name":"phosphoenolpyruvate synthase activity","type":"related"},{"name":"phosphoenolpyruvic synthase activity","type":"related"},{"name":"phosphopyruvate synthetase activity","type":"related"},{"name":"pyruvate,water dikinase activity","type":"related"},{"name":"pyruvate-water dikinase (phosphorylating)","type":"related"},{"name":"water pyruvate dikinase activity","type":"exact"}],"termid":"GO:0008986"}


id: PBO:0056250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein","termid":"PBO:0056250"}


id: SO:0001032
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"mitochondrial_sequence","termid":"SO:0000737"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_DNA"],"synonyms":[{"name":"mitochondrial DNA","type":"exact"},{"name":"mtDNA","type":"exact"}],"termid":"SO:0001032"}


id: SO:1000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome carrying the two right (D = dextro) telomeres.","definition_xrefs":["FB:manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosynaptic_chromosome","termid":"SO:1000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrosynaptic_chromosome","synonyms":[{"name":"dextrosynaptic chromosome","type":"exact"}],"termid":"SO:1000142"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: GO:0010776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A system for the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic mismatch repair","termid":"GO:0000710"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0007049","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"meiotic mismatch repair involved in meiotic gene conversion","termid":"GO:0010776"}


id: PBO:0067266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 340, pseudogene","termid":"PBO:0067266"}


id: GO:1901914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"negatively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of capsule organization","synonyms":[{"name":"down regulation of capsule organisation","type":"exact"},{"name":"down regulation of capsule organization","type":"exact"},{"name":"down regulation of capsule organization and biogenesis","type":"related"},{"name":"down-regulation of capsule organisation","type":"exact"},{"name":"down-regulation of capsule organization","type":"exact"},{"name":"down-regulation of capsule organization and biogenesis","type":"related"},{"name":"downregulation of capsule organisation","type":"exact"},{"name":"downregulation of capsule organization","type":"exact"},{"name":"downregulation of capsule organization and biogenesis","type":"related"},{"name":"inhibition of capsule organisation","type":"narrow"},{"name":"inhibition of capsule organization","type":"narrow"},{"name":"inhibition of capsule organization and biogenesis","type":"related"},{"name":"negative regulation of capsule organisation","type":"exact"},{"name":"negative regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901914"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["GOC:mtg_muscle","PMID:22366062","GOC:mah","ISBN:0815332181","Wikipedia:Gap_junction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: PBO:0056700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEIS1 antisense RNA 3","termid":"PBO:0056700"}


id: PBO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 4","termid":"PBO:0051674"}


id: PBO:0030746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell","termid":"PBO:0030746"}


id: FYPO:0006041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is decreased.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0000138","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased rate of chromosome recapture during mitosis","type":"exact"},{"name":"decreased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased rate of mitotic sister kinetochore recapture","type":"exact"},{"name":"increased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"reduced rate of mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0006041"}


id: PBO:0112986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis; localized to peroxisomes","termid":"PBO:0112986"}


id: FYPO:0001213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man8GlcNAc2 measured in a cell is higher than normal. Man8GlcNAc2 is any N-glycan that consists of a branched ten-membered mannooligosaccharide containing eight D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PomBase:mah","CHEBI:64048","CHEBI:64052","PMID:9813085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased Man8GlcNAc level","synonyms":[{"name":"increased Man8GlcNAc accumulation","type":"related"},{"name":"increased Man8GlcNAc level during mitotic cell cycle","type":"related"},{"name":"increased Man8GlcNAc level during vegetative growth","type":"exact"},{"name":"increased Man8GlcNAc2 level","type":"exact"},{"name":"increased cellular Man8GlcNAc level","type":"exact"}],"termid":"FYPO:0001213"}


id: GO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.","definition_xrefs":["PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-butenylglucosinolate 2-hydroxylase activity","secondary_identifiers":["RHEA:60628","MetaCyc:RXNQT-4343"],"synonyms":[{"name":"But-3-enyl Glucosinolate-2-hydroxylase activity","type":"exact"}],"termid":"GO:0062131"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: PBO:0027992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027992"}


id: PR:P54874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hcs1 gene.","definition_xrefs":["UniProtKB:P54874","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.14c","synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMG-CoA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hcs1","type":"exact"}],"termid":"PR:P54874"}


id: PBO:0038485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 10","termid":"PBO:0038485"}


id: PBO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 4","termid":"PBO:0043329"}


id: GO:1905222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an atrioventricular canal is generated and organized.","definition_xrefs":["GO_REF:0000083","GOC:BHF","PMID:19703439","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"atrioventricular canal development","termid":"GO:0036302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal morphogenesis","synonyms":[{"name":"AV canal morphogenesis","type":"exact"},{"name":"AVC morphogenesis","type":"exact"},{"name":"atrial canal morphogenesis","type":"exact"},{"name":"atrio-ventricular canal morphogenesis","type":"exact"},{"name":"canalis atrioventricularis morphogenesis","type":"related"},{"name":"ependymal canal morphogenesis","type":"related"}],"termid":"GO:1905222"}


id: PR:Q9Y719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok13 gene.","definition_xrefs":["UniProtKB:Q9Y719","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.05","synonyms":[{"name":"Spom972h-mok13","type":"exact"}],"termid":"PR:Q9Y719"}


id: PBO:0027350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_cell_separation_after_cytokinesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027350"}


id: GO:0008936
data:
  {"annotated_genes":["SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105699],"is_not":false,"summary":null,"term":"GO:0008936"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide + H2O = nicotinate + NH3.","definition_xrefs":["EC:3.5.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"nicotinamidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14545","MetaCyc:NICOTINAMID-RXN"],"synonyms":[{"name":"NAMase activity","type":"related"},{"name":"YNDase activity","type":"related"},{"name":"nicotinamide amidase activity","type":"related"},{"name":"nicotinamide amidohydrolase activity","type":"related"},{"name":"nicotinamide deaminase activity","type":"related"},{"name":"nicotine deamidase activity","type":"related"}],"termid":"GO:0008936","terms_by_termid":{"GO:0008936":null}}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: PR:O59835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14303:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.02c","secondary_identifiers":["UniProtKB:O59835"],"synonyms":[{"name":"SPBC12D12.02c","type":"related"},{"name":"Spom972h-POLD4","type":"exact"}],"termid":"PR:O59835"}


id: PBO:0082803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart","termid":"PBO:0082803"}


id: PBO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication checkpoint kinase Cds1","termid":"PBO:0005261"}


id: GO:0005942
data:
  {"annotated_genes":["SJAG_02699","SJAG_00114","SJAG_01876","SJAG_04552","SJAG_04860","SJAG_03403"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90731,88717,93688,98225,107592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[101785,88718,98226,93689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A protein complex capable of phosphatidylinositol 3-kinase activity and containing subunits of any phosphatidylinositol 3-kinase (PI3K) enzyme. These complexes are divided in three classes (called I, II and III) that differ for their presence across taxonomic groups and for the type of their constituents. Catalytic subunits of phosphatidylinositol 3-kinase enzymes are present in all 3 classes; regulatory subunits of phosphatidylinositol 3-kinase enzymes are present in classes I and III; adaptor proteins have been observed in class II complexes and may be present in other classes too.","definition_xrefs":["GOC:bf","PMID:24587488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"extrinsic component of membrane","termid":"GO:0019898"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidylinositol 3-kinase complex","type":"exact"},{"name":"PI3-kinase p85-subunit alpha- PI3-kinase p110 complex","type":"narrow"},{"name":"PI3K complex","type":"exact"},{"name":"PIK3C3-PIK3R4 complex","type":"narrow"},{"name":"PIK3CA-PIK3R1 complex","type":"narrow"},{"name":"phosphoinositide 3-kinase complex","type":"exact"}],"termid":"GO:0005942","terms_by_termid":{"GO:0034271":null,"GO:0034272":null}}


id: GO:0033905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->3)-beta-D-glycosidic linkages in (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"xylan endo-1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.32-RXN"],"synonyms":[{"name":"1,3-beta-D-xylan xylanohydrolase activity","type":"related"},{"name":"1,3-beta-xylanase activity","type":"related"},{"name":"1,3-xylanase activity","type":"related"},{"name":"beta-1,3-xylanase activity","type":"related"},{"name":"endo-1,3-beta-xylanase activity","type":"related"},{"name":"endo-1,3-xylanase activity","type":"related"},{"name":"endo-beta-1,3-xylanase activity","type":"related"},{"name":"xylanase activity","type":"broad"}],"termid":"GO:0033905"}


id: PBO:0005737
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin subunit CuT3 Interacting protein","termid":"PBO:0005737"}


id: GO:0060969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of gene silencing, the transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene silencing (obsolete GO:0060969)","termid":"GO:0060969"}


id: SO:0001156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -10 and -60 relative to the TSS. Consensus sequence is WATCGATW.","definition_xrefs":["PMID:12537576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE_motif","synonyms":[{"name":"DRE motif","type":"exact"},{"name":"NDM4","type":"exact"},{"name":"WATCGATW_motif","type":"exact"}],"termid":"SO:0001156"}


id: PBO:0030467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pantothenate_import","termid":"PBO:0030467"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PBO:0084810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; localized to the mitochondrial outer membrane","termid":"PBO:0084810"}


id: GO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP metabolic process (obsolete GO:0030815)","synonyms":[{"name":"down regulation of cAMP metabolic process","type":"exact"},{"name":"down-regulation of cAMP metabolic process","type":"exact"},{"name":"downregulation of cAMP metabolic process","type":"exact"},{"name":"inhibition of cAMP metabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"negative regulation of cAMP metabolism","type":"exact"},{"name":"negative regulation of cyclic AMP metabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP metabolism","type":"exact"}],"termid":"GO:0030815"}


id: PBO:0064773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 4","termid":"PBO:0064773"}


id: PATO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having exactly one organism as a participant.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single organismal process quality","termid":"PATO:0002487"}


id: GO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-allose-6-phosphate = D-allulose-6-phosphate.","definition_xrefs":["MetaCyc:RXN0-303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"D-allose 6-phosphate isomerase activity","secondary_identifiers":["RHEA:28430"],"synonyms":[{"name":"allose 6-phosphate isomerase activity","type":"narrow"}],"termid":"GO:0008786"}


id: PBO:0030642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_raffinose_carbon_source","termid":"PBO:0030642"}


id: PBO:0091530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty-Six binding protein","termid":"PBO:0091530"}


id: PR:Q9UUD0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C2.10 gene.","definition_xrefs":["UniProtKB:Q9UUD0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.10","synonyms":[{"name":"Spom972h-SPBC19C2.10","type":"exact"}],"termid":"PR:Q9UUD0"}


id: GO:0150138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-37 production.","definition_xrefs":["GOC:aruk","PMID:30362558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-37 production","termid":"GO:0150136"},{"relation_name":"negatively_regulates","term_name":"interleukin-37 production","termid":"GO:0150137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-37 production","synonyms":[{"name":"negative regulation of interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150138"}


id: FYPO:0005197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during glucose starvation","synonyms":[{"name":"increased protein phosphorylation during glucose depletion","type":"exact"},{"name":"increased protein phosphorylation during glucose deprivation","type":"exact"}],"termid":"FYPO:0005197"}


id: PATO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's being composed of more than one identifiable entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed","termid":"PATO:0002122"}


id: PBO:0028623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2/U5/U6_snRNP_complex_assembly","termid":"PBO:0028623"}


id: GO:1900135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"positively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of renin secretion into blood stream","synonyms":[{"name":"activation of renin release into blood stream","type":"narrow"},{"name":"activation of renin secretion into blood stream","type":"narrow"},{"name":"positive regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin secretion into blood stream","type":"exact"},{"name":"up-regulation of renin release into blood stream","type":"exact"},{"name":"up-regulation of renin secretion into blood stream","type":"exact"},{"name":"upregulation of renin release into blood stream","type":"exact"},{"name":"upregulation of renin secretion into blood stream","type":"exact"}],"termid":"GO:1900135"}


id: GO:0060859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of vesicle-mediated transport involved in floral organ abscission (obsolete GO:0060859)","termid":"GO:0060859"}


id: PBO:0031160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_threonine_import","termid":"PBO:0031160"}


id: PBO:0046325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 3","termid":"PBO:0046325"}


id: PBO:0057390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548d-1","termid":"PBO:0057390"}


id: GO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a cardiac septum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum development","synonyms":[{"name":"heart septum development","type":"exact"}],"termid":"GO:0003279"}


id: PBO:0073367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 2","termid":"PBO:0073367"}


id: FYPO:0009099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on mannitol carbon source","synonyms":[{"name":"decreased growth on mannitol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on mannitol carbon source","type":"exact"},{"name":"reduced cell growth on mannitol carbon source","type":"related"},{"name":"slow cell growth on mannitol carbon source","type":"narrow"}],"termid":"FYPO:0009099"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: GO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which mannose, the aldohexose manno-hexose, is converted to fructose-6-phosphate.","definition_xrefs":["GOC:dph","ISBN:0879010479","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"mannose to fructose-6-phosphate catabolic process","secondary_identifiers":["MetaCyc:MANNCAT-PWY","MetaCyc:PWY3O-1743"],"synonyms":[{"name":"mannose metabolism to fructose-6-phosphate","type":"exact"}],"termid":"GO:0061611"}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: GO:0039003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which regions of the embryo are delineated into the area in which the pronephric kidney will develop.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"kidney field specification","termid":"GO:0072004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric field specification","synonyms":[{"name":"pronephric kidney field specification","type":"exact"}],"termid":"GO:0039003"}


id: GO:0141089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glucose.","definition_xrefs":["PMID:17470517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"glucose sensor activity","synonyms":[{"name":"glucose sensing activity","type":"exact"}],"termid":"GO:0141089"}


id: GO:0008194
data:
  {"annotated_genes":["SJAG_00876","SJAG_01028","SJAG_04571","SJAG_02222","SJAG_03057","SJAG_00442","SJAG_04236","SJAG_02804","SJAG_04184","SJAG_03066","SJAG_01531","SJAG_00182","SJAG_06383","SJAG_00183","SJAG_01288","SJAG_02913","SJAG_02916","SJAG_00129","SJAG_03311","SJAG_04821","SJAG_01427","SJAG_05285","SJAG_00394","SJAG_04881","SJAG_04119","SJAG_01646","SJAG_01862","SJAG_03587","SJAG_04868"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87698,102182,109242,90570,111886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[73450,89443,92629,87954,97158,93249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[100270,105154,110453,113839,85274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047657"},{"annotations":[111887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[100745,84845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004100"},{"annotations":[107163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[101840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"},{"annotations":[94780,94446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004577"},{"annotations":[106005,104663,107676,89090,89180,113294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017176"},{"annotations":[109843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.","definition_xrefs":["PMID:11846783","InterPro:IPR004224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00183":null,"SJAG_00394":null,"SJAG_00442":null,"SJAG_00876":null,"SJAG_01028":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02222":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03066":null,"SJAG_03311":null,"SJAG_03587":null,"SJAG_04119":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_04821":null,"SJAG_04868":null,"SJAG_04881":null,"SJAG_05285":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-glycosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162730"],"termid":"GO:0008194","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004100":null,"GO:0004577":null,"GO:0004581":null,"GO:0017176":null,"GO:0047220":null,"GO:0047657":null,"GO:0140752":null}}


id: PBO:0038960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase","termid":"PBO:0038960"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: PBO:0066292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member T, pseudogene","termid":"PBO:0066292"}


id: GO:1902626
data:
  {"annotated_genes":["SJAG_02759","SJAG_00949","SJAG_00689","SJAG_02830","SJAG_04492","SJAG_01811","SJAG_04669","SJAG_01454","SJAG_04004","SJAG_01420","SJAG_04108","SJAG_01606","SJAG_03080","SJAG_03458","SJAG_01839","SJAG_04395","SJAG_00882","SJAG_02508","SJAG_00722","SJAG_03466","SJAG_04940","SJAG_03012","SJAG_02952"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85753,88486,88905,89303,94082,95277,96501,96687,96831,98615,99608,102076,103516,105087,106886,107516,108217,108976,111836,111837,112232,112722,114933],"is_not":false,"summary":null,"term":"GO:1902626"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the large subunit precursor of the preribosome.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:22735702","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01420":null,"SJAG_01454":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02508":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03080":null,"SJAG_03458":null,"SJAG_03466":null,"SJAG_04004":null,"SJAG_04108":null,"SJAG_04395":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_04940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0065003"],"is_obsolete":false,"name":"assembly of large subunit precursor of preribosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome assembly","type":"narrow"},{"name":"66S preribosome formation","type":"narrow"},{"name":"preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902626","terms_by_termid":{"GO:1902626":null}}


id: PBO:0088610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3","termid":"PBO:0088610"}


id: PBO:0040808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD cargo adaptor 1","termid":"PBO:0040808"}


