# terms

id: PBO:0030762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_mercury_ion","termid":"PBO:0030762"}


id: GO:1905879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26434723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oogenesis","synonyms":[{"name":"regulation of ovum development","type":"exact"}],"termid":"GO:1905879"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: GO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction mediated by G-protein alpha subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction mediated by G-protein alpha subunit (obsolete GO:0075091)","termid":"GO:0075091"}


id: GO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086038"}


id: PBO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17","termid":"PBO:0000475"}


id: PR:O74803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UV excision repair protein RAD23 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV excision repair protein rhp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.12","secondary_identifiers":["UniProtKB:O74803"],"synonyms":[{"name":"RAD23 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC2D10.12","type":"related"},{"name":"Spom972h-RAD23B","type":"exact"}],"termid":"PR:O74803"}


id: RO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquires_nutrients_from","termid":"RO:0002457"}


id: PBO:0058164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4458","termid":"PBO:0058164"}


id: MOD:00532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12845591","Unimod:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shimadzu 13CNBS","synonyms":[{"name":"NBS:13C(6)","type":"related"},{"name":"Shimadzu NBS-13C","type":"related"}],"termid":"MOD:00532"}


id: GO:1902905
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["PMID:23921388","GOC:rl","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"positively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of fibril organisation","type":"narrow"},{"name":"activation of fibril organization","type":"narrow"},{"name":"positive regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organization","type":"related"},{"name":"up-regulation of fibril organisation","type":"related"},{"name":"up-regulation of fibril organization","type":"related"},{"name":"upregulation of fibril organisation","type":"related"},{"name":"upregulation of fibril organization","type":"related"}],"termid":"GO:1902905","terms_by_termid":{"GO:0031117":null}}


id: PBO:0089562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase","termid":"PBO:0089562"}


id: PBO:0067085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 121, pseudogene","termid":"PBO:0067085"}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: PBO:0030212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0030212"}


id: PBO:0065514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein prenyltransferase alpha subunit repeat containing 1","termid":"PBO:0065514"}


id: GO:0034824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citronellyl-CoA + NAD+ = cis-geranyl-CoA + NADH + H+.","definition_xrefs":["PMID:31964529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"citronellyl-CoA dehydrogenase activity","termid":"GO:0034824"}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: PBO:0113237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic epsilon subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER; forms a pocket with Wbp1p involved in binding terminal glucose units of the donor glycan; located in the ER lumen","termid":"PBO:0113237"}


id: PBO:0077816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 13","termid":"PBO:0077816"}


id: GO:1900726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of osmoregulated periplasmic glucan.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"osmoregulated periplasmic glucan metabolic process","termid":"GO:1900725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan catabolic process","synonyms":[{"name":"osmoregulated periplasmic glucan breakdown","type":"exact"},{"name":"osmoregulated periplasmic glucan catabolism","type":"exact"},{"name":"osmoregulated periplasmic glucan degradation","type":"exact"}],"termid":"GO:1900726"}


id: PBO:0072765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A16","termid":"PBO:0072765"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: PBO:0046779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXTL3 antisense RNA 1","termid":"PBO:0046779"}


id: PBO:0077587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPO antisense RNA 1","termid":"PBO:0077587"}


id: PBO:0040236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 6 beta","termid":"PBO:0040236"}


id: GO:0075322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oomycete sporangium development, a process that leads to the formation of oomycete sporangium, a single-celled or many-celled structure that germinates directly to form an infection hypha or differentiate, through specialized cleavage vesicles, into between 10 and 30 zoospores, which is laterally flagellated.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation","termid":"GO:0034305"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"oomycete sporangium development","termid":"GO:0075321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oomycete sporangium development","termid":"GO:0075322"}


id: GO:0001536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex forming the elongated portion of the radial spoke between the base which binds to the A-tubule of each microtubule outer doublet and the neck which connects to the spoke head within the ciliary or flagellum axoneme.","definition_xrefs":["GOC:hjd","PMID:34871179","GOC:krc","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"radial spoke stalk","termid":"GO:0001536"}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: PBO:0084806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; MLO1 is not an essential gene","termid":"PBO:0084806"}


id: PBO:0040663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 9","termid":"PBO:0040663"}


id: PBO:0083455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene GIM5/YML094W; deletion confers sensitivity to GSAO","termid":"PBO:0083455"}


id: PBO:0041104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bassoon presynaptic cytomatrix protein","termid":"PBO:0041104"}


id: GO:0018522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ADP + cyclohexa-1,5-diene-1-carbonyl-CoA + oxidized ferredoxin + 2 phosphate = 2 ATP + 2 H2O + benzoyl-CoA + reduced ferredoxin.","definition_xrefs":["EC:1.3.7.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzoyl-CoA reductase activity","secondary_identifiers":["RHEA:30199","KEGG_REACTION:R02451","UM-BBD_reactionID:r0190","MetaCyc:1.3.99.15-RXN"],"synonyms":[{"name":"benzoyl-CoA reductase (dearomatizing) activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA:ferredoxin oxidoreductase (aromatizing, ATP-forming) activity","type":"exact"}],"termid":"GO:0018522"}


id: PBO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 62","termid":"PBO:0048351"}


id: PATO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000283 f2 fertility (obsolete PATO:0000283)","termid":"PATO:0000283"}


id: GO:0046267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine catabolic process (obsolete GO:0046267)","synonyms":[{"name":"triethanolamine breakdown","type":"exact"},{"name":"triethanolamine catabolism","type":"exact"},{"name":"triethanolamine degradation","type":"exact"}],"termid":"GO:0046267"}


id: PBO:0011998
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible non-coding RNA","termid":"PBO:0011998"}


id: GO:0019745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid biosynthetic process","synonyms":[{"name":"pentacyclic triterpenoid anabolism","type":"exact"},{"name":"pentacyclic triterpenoid biosynthesis","type":"exact"},{"name":"pentacyclic triterpenoid formation","type":"exact"},{"name":"pentacyclic triterpenoid synthesis","type":"exact"}],"termid":"GO:0019745"}


id: PBO:0065058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and arginine rich end leucine rich repeat protein","termid":"PBO:0065058"}


id: PBO:0109373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 7","termid":"PBO:0109373"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_00071","SJAG_01210","SJAG_03681","SJAG_03602","SJAG_04280","SJAG_02392","SJAG_03048","SJAG_04332","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85077,111968,104965,97716,98458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[90645,91952,94534,112073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: GO:0033146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"regulation of estrogen receptor signalling pathway","type":"exact"}],"termid":"GO:0033146"}


id: FYPO:0009094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine and proline as the nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"increased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009094"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: GO:0015234
data:
  {"annotated_genes":["SJAG_04673","SJAG_03652","SJAG_00835","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86273,86274],"is_not":false,"summary":null,"term":"GO:0015234"},{"annotations":[96776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[99741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiamine from one side of a membrane to the other. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"thiamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-199626","RHEA:34919","GO:0015403","GO:0015402"],"synonyms":[{"name":"thiamin permease activity","type":"exact"},{"name":"thiamin transmembrane transporter activity","type":"exact"},{"name":"thiamin uptake transporter activity","type":"related"},{"name":"thiamine permease activity","type":"exact"},{"name":"thiamine uptake transmembrane transporter activity","type":"related"},{"name":"vitamin B1 transporter activity","type":"exact"}],"termid":"GO:0015234","terms_by_termid":{"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: GO:0031619
data:
  {"annotated_genes":["SJAG_03926","SJAG_04259","SJAG_07002","SJAG_05019","SJAG_03698","SJAG_01224","SJAG_03327","SJAG_05295","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83957,86406,89898,94720,97427,103903,109858,111596,113121],"is_not":false,"summary":null,"term":"GO:0031619"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister centromeres and kinetochores of one chromosome are fused and orientated so the chromosomes attach to microtubules that emanate from the same spindle pole. This process ensures that homologous l chromosomes are segregated at anaphase of meiosis I.","definition_xrefs":["PMID:15062096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01224":null,"SJAG_01805":null,"SJAG_03327":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_04259":null,"SJAG_05019":null,"SJAG_05295":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"homologous chromosome orientation in meiotic metaphase I","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homologous chromosome orientation during meiosis","type":"related"},{"name":"homologous chromosome orientation during meiosis I","type":"related"}],"termid":"GO:0031619","terms_by_termid":{"GO:0031619":null}}


id: GO:0070106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-27 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-27-mediated signaling pathway","synonyms":[{"name":"IL-27-mediated signaling pathway","type":"exact"},{"name":"IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070106"}


id: GO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diphosphate, the anion or salt of diphosphoric acid.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diphosphate metabolic process","synonyms":[{"name":"pyrophosphate metabolism","type":"exact"}],"termid":"GO:0071344"}


id: SO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has been implicated in binding although the exact coordinates of binding may be unknown.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_defined_binding_region","synonyms":[{"name":"experimentally defined binding region","type":"related"}],"termid":"SO:0001696"}


id: FYPO:0007089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally at the mitotic G2/M phase transition when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"},{"relation_name":"is_a","term_name":"cell cycle arrest at mitotic G2/M phase transition during starvation","termid":"FYPO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000257","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","synonyms":[{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur depletion","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur deprivation","type":"exact"},{"name":"normal cell cycle arrest at mitotic G2/M phase transition during sulfur limitation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G2 phase during sulfur starvation","type":"related"},{"name":"normal mitotic cell cycle arrest at mitotic G2/M phase transition during sulfur starvation","type":"exact"}],"termid":"FYPO:0007089"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["PMID:16556257","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: PBO:0030311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_at_high_temperature","termid":"PBO:0030311"}


id: PBO:0002988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.5","termid":"PBO:0002988"}


id: GO:0052355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellulose in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall cellulose (obsolete GO:0052355)","termid":"GO:0052355"}


id: GO:1902120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic spindle elongation.","definition_xrefs":["GOC:TermGenie","PMID:23370392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic nuclear division","termid":"GO:0045835"},{"relation_name":"is_a","term_name":"regulation of meiotic spindle elongation","termid":"GO:1902119"},{"relation_name":"negatively_regulates","term_name":"meiotic spindle elongation","termid":"GO:0051232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of meiotic spindle elongation","synonyms":[{"name":"down regulation of meiotic spindle elongation","type":"exact"},{"name":"down regulation of spindle elongation during meiosis","type":"exact"},{"name":"down-regulation of meiotic spindle elongation","type":"exact"},{"name":"down-regulation of spindle elongation during meiosis","type":"exact"},{"name":"downregulation of meiotic spindle elongation","type":"exact"},{"name":"downregulation of spindle elongation during meiosis","type":"exact"},{"name":"inhibition of meiotic spindle elongation","type":"narrow"},{"name":"inhibition of spindle elongation during meiosis","type":"exact"},{"name":"negative regulation of spindle elongation during meiosis","type":"exact"}],"termid":"GO:1902120"}


id: GO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052232)","synonyms":[{"name":"positive aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052232"}


id: PBO:0072512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 41","termid":"PBO:0072512"}


id: PBO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tyrosine","termid":"PBO:0035761"}


id: PBO:0055098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2516","termid":"PBO:0055098"}


id: GO:1905157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of photosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7592491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"positively_regulates","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of photosynthesis","synonyms":[{"name":"activation of photosynthesis","type":"narrow"},{"name":"up regulation of photosynthesis","type":"exact"},{"name":"up-regulation of photosynthesis","type":"exact"},{"name":"upregulation of photosynthesis","type":"exact"}],"termid":"GO:1905157"}


id: PBO:0044441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 10, pseudogene","termid":"PBO:0044441"}


id: PBO:0046612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K13 member 1","termid":"PBO:0046612"}


id: GO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron development","synonyms":[{"name":"norepinephrine secreting neuron development","type":"exact"}],"termid":"GO:0003358"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: PBO:0078040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 30","termid":"PBO:0078040"}


id: FYPO:0000577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of gene silencing is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"abnormal gene silencing","termid":"FYPO:0000574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased gene silencing","synonyms":[{"name":"increased gene silencing during mitotic cell cycle","type":"related"},{"name":"increased gene silencing during vegetative growth","type":"exact"},{"name":"silencing: increased","type":"related"}],"termid":"FYPO:0000577"}


id: PBO:0074062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39","termid":"PBO:0074062"}


id: PBO:0070769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 5","termid":"PBO:0070769"}


id: PBO:0109647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma Y-linked (pseudogene)","termid":"PBO:0109647"}


id: PR:Q9URV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sulfiredoxin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21348:SF0","OMA:SCHPO02428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.02c","secondary_identifiers":["UniProtKB:Q9URV9"],"synonyms":[{"name":"Spom972h-SRXN1","type":"exact"}],"termid":"PR:Q9URV9"}


id: PR:000050527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.03c","termid":"PR:000050527"}


id: PBO:0082546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on mutant phenotype and its regulation by Ste12p; SWC10 has a paralog, SCW4, that arose from the whole genome duplication","termid":"PBO:0082546"}


id: GO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of slow-twitch skeletal muscle fiber contraction","termid":"GO:0031449"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of slow-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of slow-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031451"}


id: RO:0002627
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_killed_by","termid":"RO:0002627"}


id: FYPO:0002075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in the population are viable at a high temperature in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population at high temperature (obsolete FYPO:0002075)","termid":"FYPO:0002075"}


id: PBO:0087932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transketolase; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids; TKL2 has a paralog, TKL1, that arose from the whole genome duplication","termid":"PBO:0087932"}


id: PBO:0044272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 12","termid":"PBO:0044272"}


id: GO:1902864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of embryonic camera-type eye development.","definition_xrefs":["GOC:mr","PMID:16872597","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of embryonic camera-type eye development","termid":"GO:1902863"},{"relation_name":"negatively_regulates","term_name":"embryonic camera-type eye development","termid":"GO:0031076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryonic camera-type eye development","synonyms":[{"name":"down regulation of embryonic camera-type eye development","type":"exact"},{"name":"down regulation of embryonic eye development","type":"exact"},{"name":"down-regulation of embryonic camera-type eye development","type":"exact"},{"name":"down-regulation of embryonic eye development","type":"exact"},{"name":"downregulation of embryonic camera-type eye development","type":"exact"},{"name":"downregulation of embryonic eye development","type":"exact"},{"name":"inhibition of embryonic camera-type eye development","type":"narrow"},{"name":"inhibition of embryonic eye development","type":"narrow"},{"name":"negative regulation of embryonic eye development","type":"exact"}],"termid":"GO:1902864"}


id: PBO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 5","termid":"PBO:0044325"}


id: SO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A signal for RNA polymerase to terminate transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"terminator","termid":"SO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic_terminator","synonyms":[{"name":"eukaryotic terminator","type":"exact"}],"termid":"SO:0000951"}


id: GO:0032932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the depolymerization of astral microtubules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of microtubule depolymerization","termid":"GO:0007026"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"negatively_regulates","term_name":"astral microtubule depolymerization","termid":"GO:0060172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"negative regulation of astral microtubule depolymerization","synonyms":[{"name":"astral microtubule stabilization","type":"exact"}],"termid":"GO:0032932"}


id: PBO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 29","termid":"PBO:0046529"}


id: GO:0052504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of callose deposition by the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052504)","synonyms":[{"name":"induction by organism of defense-related papilla formation in symbiont","type":"narrow"},{"name":"induction by organism of defense-related symbiont callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related papilla formation in symbiont","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052504"}


id: FYPO:0007364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyruvate kinase activity","termid":"FYPO:0007363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0005447","FYPO:0000002","FYPO:0000661"],"is_obsolete":false,"name":"increased pyruvate kinase activity","termid":"FYPO:0007364"}


id: PBO:0064337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR5 antisense RNA 1","termid":"PBO:0064337"}


id: PBO:0055773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNX1 antisense RNA 2","termid":"PBO:0055773"}


id: GO:1904139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:BHF","PMID:19100238","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell migration","termid":"GO:1904139"}


id: PBO:0051785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F3","termid":"PBO:0051785"}


id: PBO:0081338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 137, pseudogene","termid":"PBO:0081338"}


id: GO:1903059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GO_REF:0000058","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein lipidation","synonyms":[{"name":"regulation of lipid:protein modification","type":"exact"},{"name":"regulation of protein amino acid lipidation","type":"exact"}],"termid":"GO:1903059"}


id: PBO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 33","termid":"PBO:0071374"}


id: PBO:0036420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga4","termid":"PBO:0036420"}


id: PBO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(p12.1)","termid":"PBO:0047948"}


id: PR:Q9UUA7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0590 protein C409.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.17c","synonyms":[{"name":"Spom972h-SPBC409.17c","type":"exact"}],"termid":"PR:Q9UUA7"}


id: GO:0019212
data:
  {"annotated_genes":["SJAG_02380","SJAG_04999","SJAG_03272","SJAG_04627","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85507,86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[107453,83998,95531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019212","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: FYPO:0001767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C48, C49, C60, C61 and C62 residues in a tRNA-Asp molecule, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation","synonyms":[{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during mitotic cell cycle","type":"related"},{"name":"decreased tRNA-Asp C48, C49, C60, C61 and C62 methylation during vegetative growth","type":"exact"},{"name":"decreased tRNA-Asp methylation on C48, C49, C60, C61 and C62","type":"exact"},{"name":"reduced tRNA-Asp C48, C49, C60, C61 and C62 methylation","type":"exact"}],"termid":"FYPO:0001767"}


id: PBO:0091264
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1-Interacting Protein","termid":"PBO:0091264"}


id: PBO:0079845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog D","termid":"PBO:0079845"}


id: GO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter inhibitor activity","termid":"GO:0141110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"channel inhibitor activity","termid":"GO:0016248"}


id: GO:0102643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"scalarane-17alpha-19-diol synthase activity","secondary_identifiers":["MetaCyc:RXN-15755"],"termid":"GO:0102643"}


id: MOD:01907
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methioninium (protonated L-methionine) residue to dehydromethionine.","definition_xrefs":["PubMed:18688235","PubMed:19775156"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine (from L-methioninium)","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01907"}


id: PBO:0079283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 2","termid":"PBO:0079283"}


id: PBO:0056199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA8 antisense RNA 1","termid":"PBO:0056199"}


id: PBO:0113480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane (PM) protein; C-terminal palmitoylation is required for membrane anchoring and protein stability; PM localization is polarized to the daughter cell; contains a conserved cysteine rich palmitoylated domain (CYSPD, aka CYSTM); related proteins in other organisms may be involved in response to stress","termid":"PBO:0113480"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: GO:0099538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to or from a synapse, mediated by a peptide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic signaling via neuropeptide","termid":"GO:0099538"}


id: PBO:0053319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 92","termid":"PBO:0053319"}


id: PBO:0045705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK3 antisense RNA 1","termid":"PBO:0045705"}


id: GO:0033545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C.","definition_xrefs":["MetaCyc:PWY-6555","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process","termid":"GO:0010264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, lipid-dependent","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthetic process, lipid-dependent","type":"exact"}],"termid":"GO:0033545"}


id: PR:O59729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.09 gene.","definition_xrefs":["UniProtKB:O59729","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein slp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.09","synonyms":[{"name":"SUN-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC3E7.09","type":"exact"}],"termid":"PR:O59729"}


id: PBO:0086650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0086650"}


id: PBO:0015237
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAM1","termid":"PBO:0015237"}


id: PBO:0088297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triglyceride lipase-cholesterol esterase","termid":"PBO:0088297"}


id: PBO:0039395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 1","termid":"PBO:0039395"}


id: PBO:0041970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 13","termid":"PBO:0041970"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PBO:0046000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX antisense RNA 1","termid":"PBO:0046000"}


id: GO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a lateral mesoderm cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"lateral mesoderm formation","termid":"GO:0048370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell differentiation","synonyms":[{"name":"lateral mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesodermal cell differentiation","type":"exact"}],"termid":"GO:0048371"}


id: PBO:0077767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 pseudogene 3","termid":"PBO:0077767"}


id: PBO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit alpha","termid":"PBO:0042299"}


id: GO:0008013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a catenin beta subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-catenin binding","termid":"GO:0008013"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-eriodictyol + S-adenosyl-L-methionine = (S)-homoeriodictyol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: PBO:0026870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus","termid":"PBO:0026870"}


id: PBO:0091693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TXNL1","termid":"PBO:0091693"}


id: GO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microtubule, mediated by motor proteins.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitochondrion localization, microtubule-mediated","termid":"GO:0034643"},{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mitochondrion transport along microtubule","synonyms":[{"name":"mitochondrial migration along microtubule","type":"exact"},{"name":"mitochondrial transport along microtubule","type":"exact"}],"termid":"GO:0047497"}


id: PR:O13800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rdl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.03c","synonyms":[{"name":"RAD51D-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rdl1","type":"exact"}],"termid":"PR:O13800"}


id: GO:0061362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000115"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"},{"relation_name":"negatively_regulates","term_name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061362"}


id: PBO:0034278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_sequence","termid":"PBO:0034278"}


id: MOD:01397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-threonine residue to form L-serine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8557573","PubMed:7592021","RESID:AA0474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxyethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Ser-Thr)","type":"exact"},{"name":"L-serine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01397"}


id: GO:0004799
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85508],"is_not":false,"summary":null,"term":"GO:0004799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = 7,8-dihydrofolate + thymidylate.","definition_xrefs":["EC:2.1.1.45","RHEA:12104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5,10-methylenetetrahydrofolate-dependent methyltransferase activity","termid":"GO:0042083"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"thymidylate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02101","MetaCyc:THYMIDYLATESYN-RXN","Reactome:R-HSA-73605"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dUMP C-methyltransferase activity","type":"related"},{"name":"TMP synthetase activity","type":"related"},{"name":"dTMP synthase activity","type":"related"},{"name":"methylenetetrahydrofolate:dUMP C-methyltransferase activity","type":"related"},{"name":"thymidylate synthetase activity","type":"related"}],"termid":"GO:0004799","terms_by_termid":{"GO:0004799":null}}


id: GO:0006909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phagocytosis","secondary_identifiers":["Wikipedia:Phagocytosis"],"termid":"GO:0006909"}


id: PBO:0045333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK8 antisense RNA 2","termid":"PBO:0045333"}


id: GO:0090020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter contributing to the formation of the posterior neural plate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in posterior neural plate formation (obsolete GO:0090020)","termid":"GO:0090020"}


id: FYPO:0003008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to zinc. Specific genes are more highly transcribed in the presence of zinc in the mutant than in wild type.","definition_xrefs":["PomBase:mah","PMID:22496451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to zinc","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to zinc","type":"exact"},{"name":"decreased repression of transcription during cellular response to zinc during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to zinc during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to zinc","type":"exact"},{"name":"reduced repression of transcription during cellular response to zinc","type":"exact"}],"termid":"FYPO:0003008"}


id: GO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the inhibition of the process of hemostasis - the stopping of bleeding or the arrest of the circulation to an organ or part - in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in impairment of hemostasis in another organism","synonyms":[{"name":"envenomation resulting in impairment of hemostasis in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of hemostasis in other organism","type":"exact"},{"name":"envenomation, impairing hemostasis in other organism","type":"exact"}],"termid":"GO:0044483"}


id: PBO:0081758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 688","termid":"PBO:0081758"}


id: GO:1990696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of four proteins, loss of which results in Usher Syndrome type 2 (USH2 syndrome), a leading genetic cause of combined hearing and vision loss. This complex is conserved in many species; in mice, it is composed of USH2A, GPR98 (aka ADGRV1), WHRN, and PDZD7.","definition_xrefs":["GOC:krc","PMID:25406310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"USH2 complex","synonyms":[{"name":"USH2 quaternary protein complex","type":"exact"}],"termid":"GO:1990696"}


id: FYECO:0000329
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which formamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ formamide","termid":"FYECO:0000329"}


id: PBO:0074003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 4","termid":"PBO:0074003"}


id: PBO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell","termid":"PBO:0030206"}


id: PBO:0083891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport; regulates ADP release from the ATP-dependent RNA helicase Dbp5p; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup116p)","termid":"PBO:0083891"}


id: PATO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000247 proboscis extension reflex (obsolete PATO:0000247)","termid":"PATO:0000247"}


id: GO:0070522
data:
  {"annotated_genes":["SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106893],"is_not":false,"summary":null,"term":"GO:0070522"}]},"cv_name":"cellular_component","definition":"A heterodimeric nucleotide-excision repair complex that has endonuclease activity specific for bubble structures characteristic of certain DNA lesions. The subunits are known as XPF/ERCC4 and ERCC1 in mammals, and Rad1p and Rad10p in S. cerevisiae.","definition_xrefs":["PMID:14734547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02828":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ERCC4-ERCC1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rad1-Rad10 complex","type":"exact"},{"name":"XPF-ERCC1 complex","type":"exact"}],"termid":"GO:0070522","terms_by_termid":{"GO:0070522":null}}


id: PBO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8","termid":"PBO:0048534"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: PR:O59733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03374","PANTHER:PTHR13264:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor syf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.13c","secondary_identifiers":["UniProtKB:O59733"],"synonyms":[{"name":"Spom972h-SYF2","type":"exact"}],"termid":"PR:O59733"}


id: GO:1900981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"negatively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenazine biosynthetic process","synonyms":[{"name":"down regulation of acridizine biosynthesis","type":"related"},{"name":"down regulation of acridizine biosynthetic process","type":"related"},{"name":"down regulation of azophenylene biosynthesis","type":"related"},{"name":"down regulation of azophenylene biosynthetic process","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down regulation of phenazine biosynthetic process","type":"exact"},{"name":"down-regulation of acridizine biosynthesis","type":"related"},{"name":"down-regulation of acridizine biosynthetic process","type":"related"},{"name":"down-regulation of azophenylene biosynthesis","type":"related"},{"name":"down-regulation of azophenylene biosynthetic process","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down-regulation of phenazine biosynthetic process","type":"exact"},{"name":"downregulation of acridizine biosynthesis","type":"related"},{"name":"downregulation of acridizine biosynthetic process","type":"related"},{"name":"downregulation of azophenylene biosynthesis","type":"related"},{"name":"downregulation of azophenylene biosynthetic process","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"downregulation of phenazine biosynthetic process","type":"exact"},{"name":"inhibition of acridizine biosynthesis","type":"related"},{"name":"inhibition of acridizine biosynthetic process","type":"related"},{"name":"inhibition of azophenylene biosynthesis","type":"related"},{"name":"inhibition of azophenylene biosynthetic process","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthesis","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthetic process","type":"related"},{"name":"inhibition of phenazine biosynthetic process","type":"narrow"},{"name":"negative regulation of acridizine biosynthesis","type":"related"},{"name":"negative regulation of acridizine biosynthetic process","type":"related"},{"name":"negative regulation of azophenylene biosynthesis","type":"related"},{"name":"negative regulation of azophenylene biosynthetic process","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900981"}


id: GO:0035511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:16482161","PMID:18775698","PMID:12594517"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative DNA demethylation (obsolete GO:0035511)","termid":"GO:0035511"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: GO:0042824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.","definition_xrefs":["PMID:10631934","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005789","GO:0005783","GO:0032991"],"is_obsolete":false,"name":"MHC class I peptide loading complex","synonyms":[{"name":"PLC","type":"related"},{"name":"peptide-loading complex","type":"exact"}],"termid":"GO:0042824"}


id: GO:1904698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"negatively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acinar cell proliferation","synonyms":[{"name":"down regulation of acinar cell proliferation","type":"exact"},{"name":"down regulation of acinic cell proliferation","type":"exact"},{"name":"down regulation of acinous cell proliferation","type":"exact"},{"name":"down-regulation of acinar cell proliferation","type":"exact"},{"name":"down-regulation of acinic cell proliferation","type":"exact"},{"name":"down-regulation of acinous cell proliferation","type":"exact"},{"name":"downregulation of acinar cell proliferation","type":"exact"},{"name":"downregulation of acinic cell proliferation","type":"exact"},{"name":"downregulation of acinous cell proliferation","type":"exact"},{"name":"inhibition of acinar cell proliferation","type":"narrow"},{"name":"inhibition of acinic cell proliferation","type":"narrow"},{"name":"inhibition of acinous cell proliferation","type":"narrow"},{"name":"negative regulation of acinic cell proliferation","type":"exact"},{"name":"negative regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904698"}


id: PBO:0063190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 2","termid":"PBO:0063190"}


id: PBO:0091974
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL-Associated Factor","termid":"PBO:0091974"}


id: GO:0051466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"activation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"positive regulation of CRF secretion","type":"exact"},{"name":"positive regulation of CRH secretion","type":"exact"},{"name":"positive regulation of corticotropin-releasing factor secretion","type":"exact"},{"name":"stimulation of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"up regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"up-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"upregulation of corticotropin-releasing hormone secretion","type":"exact"}],"termid":"GO:0051466"}


id: PBO:0049060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 68","termid":"PBO:0049060"}


id: PBO:0060963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFU1 iron-sulfur cluster scaffold","termid":"PBO:0060963"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: RO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297)","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecologically_related_to","termid":"RO:0002321"}


id: PBO:0003865
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eleven-nineteen Lysine rich in Leukemia","termid":"PBO:0003865"}


id: PBO:0057795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-4","termid":"PBO:0057795"}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: PBO:0058431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4801","termid":"PBO:0058431"}


id: PBO:0076904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX101 pseudogene 1","termid":"PBO:0076904"}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: PBO:0040162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase pseudogene 1","termid":"PBO:0040162"}


id: PBO:0039349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy and beclin 1 regulator 1","termid":"PBO:0039349"}


id: FYPO:0007744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short spindle assembles during the first meiotic nuclear division, and may begin elongation, but does not elongate normally or completely, and collapses during prophase I. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle collapse during meiosis I","termid":"FYPO:0007103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiotic prophase I","synonyms":[{"name":"broken meiotic spindle during prophase I","type":"related"},{"name":"meiotic spindle breakage during prophase I","type":"exact"},{"name":"spindle collapse during prophase I of meiotic cell cycle","type":"related"},{"name":"spindle collapse during prophase of meiosis I","type":"exact"}],"termid":"FYPO:0007744"}


id: PBO:0086390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative checkpoint factor in transcription; binds to U2 snRNA and Prp11p; regulates toggling of the U2 snRNA stem II region between different structures; contains two RNA recognition motifs (RRMs)","termid":"PBO:0086390"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: PBO:0112613
data:
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id: PBO:0029956
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id: GO:0004857
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id: FYPO:0007703
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id: GO:0005856
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id: GO:0048354
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id: GO:0061264
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id: PBO:0039246
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id: PBO:0040726
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 1","termid":"PBO:0040726"}


id: PBO:0066902
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id: PBO:0068110
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id: PBO:0084823
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id: GO:0033114
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a cyanelle thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"cyanelle thylakoid","termid":"GO:0009843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid lumen","termid":"GO:0033114"}


id: GO:0009209
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id: PBO:0074695
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id: PBO:0091507
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase","termid":"PBO:0091507"}


id: PBO:0041827
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0041827"}


id: GO:0050425
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + peptidyl-L-lysine (or L-arginine) = L-lysine (or L-arginine) + peptide. Preferential release of a C-terminal lysine or arginine amino acid.","definition_xrefs":["MetaCyc:CARBOXYPEPTIDASE-B-RXN","EC:3.4.17.2"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase B activity (obsolete GO:0050425)","synonyms":[{"name":"carboxypeptidase B activity","type":"exact"},{"name":"pancreatic carboxypeptidase B","type":"related"},{"name":"peptidyl-L-lysine [L-arginine]hydrolase activity","type":"related"},{"name":"protaminase activity","type":"related"},{"name":"tissue carboxypeptidase B","type":"related"}],"termid":"GO:0050425"}


id: PBO:0034283
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id: PBO:0014262
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id: GO:0043384
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id: PBO:0088768
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2","termid":"PBO:0088768"}


id: PBO:0038899
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor B1","termid":"PBO:0038899"}


id: PBO:0113163
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of Las17p-mediated Arp2/3 complex activation; F-BAR protein that directly inhibits Las17p stimulation of Arp2/3 complex-mediated actin assembly in vitro; involved in formation of the endocytic site; intrinsically disordered domain induces bundling of Cdc11p-capped septin filaments to promote septin collar assembly, similar to mammalian ortholog FCHo2; localizes to sites of polarized growth, the septin ring, and endocytic patches; involved in actin cytoskeletal organization","termid":"PBO:0113163"}


id: PBO:0029471
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_acid_phosphatase_activity","termid":"PBO:0029471"}


id: GO:0006486
data:
  {"annotated_genes":["SJAG_03150","SJAG_04571","SJAG_02648","SJAG_04770","SJAG_03188","SJAG_04363","SJAG_04127","SJAG_00183","SJAG_00394","SJAG_03764","SJAG_03774","SJAG_04095","SJAG_02783","SJAG_02903","SJAG_04231","SJAG_04090","SJAG_01389","SJAG_01069","SJAG_03082","SJAG_01276","SJAG_03311","SJAG_02102","SJAG_02519","SJAG_02996","SJAG_02056","SJAG_01972","SJAG_00747","SJAG_04954","SJAG_03149","SJAG_00816","SJAG_03555","SJAG_03676","SJAG_01595","SJAG_04401","SJAG_01950","SJAG_04053","SJAG_04952","SJAG_05348","SJAG_00437","SJAG_04728","SJAG_01264","SJAG_03871","SJAG_02163","SJAG_01021","SJAG_01491","SJAG_03032","SJAG_04821","SJAG_04906","SJAG_03790","SJAG_03056","SJAG_04316","SJAG_00554","SJAG_01006","SJAG_03330","SJAG_00598","SJAG_00334","SJAG_05219","SJAG_00831","SJAG_03333","SJAG_00924","SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91815,93884,96124,104095,104467,109839,110036,112153,113872],"is_not":false,"summary":null,"term":"GO:0006486"},{"annotations":[108631,112810,90002,107161,94498,102796,96087,92526,86494,98396,99671,99871,101078,105366,87231,94445,96104,94779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[98882,102034,108775,94861,96862,94852,94873,106786,89250,106792,106983,101141,85331,95018,94872,89249,89248,89251,83645,94875,113371,94874,105368,98809,95881,94851,96088,105098,96427,101026,93992,94854,94853,100596,114087,97439,114417,95740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[107162,97448,105369,98663,109840,112914,91430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[100180,101839,89128,97635,100597,114088,106787,106793,98810,96863,94862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[102035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule glycosylation","termid":"GO:0043413"},{"relation_name":"part_of","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glycosylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0065006"],"synonyms":[{"name":"protein amino acid glycosylation","type":"exact"},{"name":"protein-carbohydrate complex assembly","type":"related"}],"termid":"GO:0006486","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: FYPO:0001651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import","termid":"FYPO:0001057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal lysine import","synonyms":[{"name":"abnormal L-lysine import","type":"exact"},{"name":"abnormal L-lysine import across plasma membrane","type":"exact"},{"name":"abnormal lysine import into cell","type":"exact"},{"name":"abnormal lysine uptake","type":"exact"}],"termid":"FYPO:0001651"}


id: FYECO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which itraconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ itraconazole","synonyms":[{"name":"+ itraconazole","type":"exact"}],"termid":"FYECO:0000431"}


id: GO:0036390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the bacterial pre-replicative complex, a protein-DNA complex that forms at the bacterial oriC during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["PMID:21035377","GOC:jh2","GOC:bf","PMID:19833870","GOC:bhm","PMID:21895796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0065003","GO:0006260","GO:0044085","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in bacterial-type DNA replication","synonyms":[{"name":"bacterial pre-RC assembly","type":"exact"},{"name":"bacterial pre-replicative complex assembly","type":"exact"}],"termid":"GO:0036390"}


id: PBO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter, pseudogene","termid":"PBO:0003018"}


id: PR:000050520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein scr1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-235, Ser-332, Ser-333, Ser-408, and Ser-410 of the amino acid sequence represented by UniProtKB:O14335. Example: UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:22140232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding protein scr1 (Schizosaccharomyces pombe)","termid":"PR:000050519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scr1/Phos(S236,S332,S333,S408,S410)","pombase_gene_id":"SPBC1D7.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-binding protein scr1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-scr1/Phos:1","type":"exact"},{"name":"UniProtKB:O14335, Ser-235/Ser-332/Ser-333/Ser-408/Ser-410, MOD:00046","type":"narrow"},{"name":"scr1/Phos(S236,S332,S333,S408,S410)","type":"exact"}],"termid":"PR:000050520"}


id: FYPO:0000484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiotic recombination","synonyms":[{"name":"absent meiotic recombination","type":"exact"},{"name":"meiotic recombination abolished","type":"exact"},{"name":"meiotic recombination: absent","type":"related"}],"termid":"FYPO:0000484"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["UniProtKB:O14099","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: GO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to a secretory granule. The secretory granule is a membrane-bounded particle, usually protein, formed in the granular endoplasmic reticulum and the Golgi complex.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"Golgi to secretory granule transport","termid":"GO:0055107"}


id: SO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_C_cluster","synonyms":[{"name":"V VJ C cluster","type":"exact"},{"name":"V-(VJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000523"}


id: GO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to redox state","synonyms":[{"name":"cellular redox signal response","type":"exact"}],"termid":"GO:0071461"}


id: GO:1990764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a myofibroblast.","definition_xrefs":["PMID:19239477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast contraction","synonyms":[{"name":"MF contraction","type":"exact"},{"name":"MFB contraction","type":"exact"}],"termid":"GO:1990764"}


id: GO:0032563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dADP, deoxyadenosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dADP binding","termid":"GO:0032563"}


id: GO:0009011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-glucose + (1,4)-alpha-D-glucosyl(n) = ADP + (1,4)-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"starch synthase activity","secondary_identifiers":["MetaCyc:GLYCOGENSYN-RXN"],"synonyms":[{"name":"ADP-glucose starch synthase activity","type":"related"},{"name":"ADP-glucose transglucosylase activity","type":"exact"},{"name":"ADP-glucose--starch glucosyltransferase activity","type":"related"},{"name":"ADP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"ADPG starch synthetase activity","type":"exact"},{"name":"ADPG-starch glucosyltransferase activity","type":"exact"},{"name":"ADPglucose-starch glucosyltransferase activity","type":"exact"},{"name":"ADPglucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"adenosine diphosphate glucose-starch glucosyltransferase activity","type":"exact"},{"name":"adenosine diphosphoglucose-starch glucosyltransferase activity","type":"exact"},{"name":"glycogen synthase activity","type":"related"},{"name":"starch (bacterial glycogen) synthase activity","type":"narrow"},{"name":"starch synthetase activity","type":"exact"}],"termid":"GO:0009011"}


id: PBO:0039077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGPAT4 intronic transcript 1","termid":"PBO:0039077"}


id: PR:Q9HGL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- whi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor whi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.02","synonyms":[{"name":"Spom972h-whi5","type":"exact"},{"name":"meiotically up-regulated gene 54 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL9"}


id: FYPO:0006885
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is lower than normal.","definition_xrefs":["PMID:30463883","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0000120","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level at mitotic spindle","synonyms":[{"name":"decreased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"decreased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"decreased protein level in mitotic spindle","type":"exact"},{"name":"reduced protein level at mitotic spindle","type":"exact"}],"termid":"FYPO:0006885"}


id: PBO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.16","termid":"PBO:0001762"}


id: PBO:0089488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase family protein","termid":"PBO:0089488"}


id: GO:2000830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"positively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of parathyroid hormone secretion","synonyms":[{"name":"positive regulation of PTH secretion","type":"exact"},{"name":"positive regulation of parathormone secretion","type":"exact"},{"name":"positive regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000830"}


id: GO:2000023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral root development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic root development","termid":"GO:2000069"},{"relation_name":"regulates","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral root development","termid":"GO:2000023"}


id: PR:O74746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J domain-containing protein spf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.05c","secondary_identifiers":["UniProtKB:O74746"],"synonyms":[{"name":"Spom972h-DNAJC8","type":"exact"}],"termid":"PR:O74746"}


id: GO:0033183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone ubiquitination (obsolete GO:0033183)","termid":"GO:0033183"}


id: GO:0070909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutamate(out) + gamma-aminobutyric acid(in) = glutamate(in) + gamma-aminobutyric acid(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transmembrane transporter activity","termid":"GO:0015185"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glutamate:gamma-aminobutyric acid antiporter activity","synonyms":[{"name":"glutamate-gamma-aminobutyric acid antiporter activity","type":"exact"},{"name":"glutamate/gamma-aminobutyric acid antiporter activity","type":"exact"},{"name":"glutamate: GABA antiporter activity","type":"exact"}],"termid":"GO:0070909"}


id: PBO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III sdj1","termid":"PBO:0018257"}


id: PBO:0087756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface","termid":"PBO:0087756"}


id: GO:1990393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, at least composed of CUL7, CCDC8 and OBSL1, that is required for maintaining microtubule and genome integrity.","definition_xrefs":["PMID:24793695","PMID:24793696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"3M complex","termid":"GO:1990393"}


id: GO:0034275
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kynurenic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid metabolic process","type":"exact"},{"name":"kynurenic acid metabolism","type":"exact"}],"termid":"GO:0034275","terms_by_termid":{"GO:0034276":null}}


id: PBO:0040740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 6","termid":"PBO:0040740"}


id: GO:0020037
data:
  {"annotated_genes":["SJAG_04823","SJAG_02744","SJAG_04217","SJAG_05027","SJAG_03249","SJAG_02794","SJAG_02398","SJAG_03929","SJAG_02646","SJAG_03750","SJAG_02982","SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83914,84616,87597,88330,90743,103928,104041,109276,111300,112179,112785,114329,115066],"is_not":false,"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a heme, a compound composed of iron complexed in a porphyrin (tetrapyrrole) ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"}],"gene_count":12,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heme binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haem binding","type":"exact"}],"termid":"GO:0020037","terms_by_termid":{"GO:0020037":null}}


id: PBO:0068755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 10, pseudogene","termid":"PBO:0068755"}


id: PBO:0113268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid binding protein; interacts with mitochondria and with Myo2p, functioning as an adaptor that recruits Myo2p and facilitates actin-based transport of mitochondria to the bud; mediates mitochondria anchorage at the bud tip; phosphorylated protein that localizes to the mitochondrial outer membrane; mRNA is targeted to the bud via the transport system involving She2p; member of the DSL1 family of tethering proteins","termid":"PBO:0113268"}


id: FYPO:0003333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is inviable, and grows in the form of a lemon prior to cell death. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable lemon-shaped cell","synonyms":[{"name":"inviable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"inviable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"inviable lemon-shaped vegetative cell","type":"exact"},{"name":"lethal; lemon-shaped cell","type":"exact"}],"termid":"FYPO:0003333"}


id: PR:Q9C469
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grt1 gene.","definition_xrefs":["UniProtKB:Q9C469","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein grt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.04c","synonyms":[{"name":"Spom972h-grt1","type":"exact"}],"termid":"PR:Q9C469"}


id: PBO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI pathogenesis related 2","termid":"PBO:0048691"}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: PBO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41","termid":"PBO:0071744"}


id: SO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a cyanelle, a photosynthetic plastid found in algae.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_sequence","synonyms":[{"name":"cyanelle sequence","type":"exact"}],"termid":"SO:0000746"}


id: PBO:0073014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit beta","termid":"PBO:0073014"}


id: PBO:0086334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proton:glutathione antiporter; localized to the vacuolar and plasma membranes; expressed at a very low level; potential role in resistance to oxidative stress and modulation of the PKA pathway; GEX2 has a paralog, GEX1, that arose from a segmental duplication","termid":"PBO:0086334"}


id: GO:1990308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-I dockerin domain of a protein. Type-I dockerin domain is the binding partner of type-1 cohesin domain.","definition_xrefs":["PMID:24080387","GOC:mengo_curators","PMID:23195689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type-I dockerin domain binding","termid":"GO:1990308"}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["PubMed:1386601","PubMed:6436247","RESID:AA0059#var","OMSSA:78","PubMed:11955008","PubMed:11955007","Unimod:134#G","PubMed:1326520","PubMed:7543369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin secretion","termid":"GO:0050796"}


id: GO:0018132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["PMID:8895467","RESID:AA0238"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolecarboxylic acid (obsolete GO:0018132)","termid":"GO:0018132"}


id: GO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the dorsal-ventral body axis in response to a combination of attractive and repulsive cues. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axon guidance","synonyms":[{"name":"dorsal-ventral axon guidance","type":"exact"},{"name":"dorsal/ventral axon pathfinding","type":"exact"},{"name":"dorsoventral axon guidance","type":"exact"}],"termid":"GO:0033563"}


id: PBO:0043038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 7","termid":"PBO:0043038"}


id: PBO:0077407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 141","termid":"PBO:0077407"}


id: PBO:0068097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 404","termid":"PBO:0068097"}


id: PBO:0043235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 6","termid":"PBO:0043235"}


id: PBO:0044799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 1","termid":"PBO:0044799"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: MOD:01394
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two serine residues and a cysteine residue by formation of a 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","synonyms":[{"name":"(5R,6R)-5-amino-6-[(1R)-1-amino-2-sulfanylethyl]-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"CROSSLNK 5-amino-piperideine-2,5-dicarboxylic acid","type":"related"},{"name":"L-cysteine 5-amino-3,4,5,6-tetrahydropyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"L-cysteine 5-aminopiperideine-2,5-dicarboxylic acid","type":"exact"}],"termid":"MOD:01394"}


id: PBO:0062041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 11","termid":"PBO:0062041"}


id: GO:0007422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands.","definition_xrefs":["GOC:go_curators","UBERON:0000010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system development","termid":"GO:0007422"}


id: PBO:0059071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1 pseudogene 1","termid":"PBO:0059071"}


id: PBO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 13","termid":"PBO:0050727"}


id: GO:0000375
data:
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id: GO:0044865
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id: PBO:0069982
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1277, pseudogene","termid":"PBO:0069982"}


id: SO:0001579
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  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: PBO:0086555
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGR039W is not an essential gene","termid":"PBO:0086555"}


id: MOD:00502
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three hydrogen atoms of a residue with three iodine atoms.","definition_xrefs":["Unimod:131","PubMed:2026710","OMSSA:116","PubMed:15627961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triiodinated residue","synonyms":[{"name":"I3Res","type":"exact"},{"name":"Triiodo","type":"related"},{"name":"tri-Iodination","type":"related"},{"name":"triiodinationy","type":"exact"}],"termid":"MOD:00502"}


id: GO:2001113
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hepatocyte growth factor stimulus.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"is_a","term_name":"regulation of cellular response to hepatocyte growth factor stimulus","termid":"GO:2001112"},{"relation_name":"negatively_regulates","term_name":"cellular response to hepatocyte growth factor stimulus","termid":"GO:0035729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to hepatocyte growth factor stimulus","synonyms":[{"name":"negative regulation of cellular response to HGF stimulus","type":"exact"}],"termid":"GO:2001113"}


id: GO:0030147
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of renal sodium excretion.","definition_xrefs":["ISBN:0198506732","GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete natriuresis (obsolete GO:0030147)","secondary_identifiers":["Wikipedia:Natriuresis"],"synonyms":[{"name":"natriuresis","type":"exact"}],"termid":"GO:0030147"}


id: GO:0045141
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id: PBO:0028386
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028386"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["Wikipedia:Enkephalin","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0049780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 14","termid":"PBO:0049780"}


id: PR:O42644
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CTP synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00487","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.03c","secondary_identifiers":["UniProtKB:O42644"],"synonyms":[{"name":"CTP synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CTPS2","type":"exact"},{"name":"UTP--ammonia ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42644"}


id: GO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholan-24-oylglycine + H2O = 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholanate + glycine.","definition_xrefs":["EC:3.5.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"choloylglycine hydrolase activity","secondary_identifiers":["MetaCyc:CHOLOYLGLYCINE-HYDROLASE-RXN","RHEA:19353"],"synonyms":[{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholan-24-oylglycine amidohydrolase activity","type":"related"},{"name":"bile salt hydrolase activity","type":"related"},{"name":"choloyltaurine hydrolase activity","type":"related"},{"name":"glycocholase activity","type":"related"}],"termid":"GO:0045302"}


id: PBO:0055563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2999","termid":"PBO:0055563"}


id: PBO:0080913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 2","termid":"PBO:0080913"}


id: PBO:0088723
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein folding protein","termid":"PBO:0088723"}


id: GO:2001043
data:
  {"annotated_genes":["SJAG_02645","SJAG_01774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85859,104034],"is_not":false,"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01774":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cell separation after cytokinesis","type":"related"},{"name":"positive regulation of cytokinetic cell separation","type":"related"}],"termid":"GO:2001043","terms_by_termid":{"GO:2001043":null}}


id: SO:1001275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence coding for a short, single-stranded, DNA sequence via a retrotransposed RNA intermediate; characteristic of some microbial genomes.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retron","termid":"SO:1001275"}


id: SO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small cytoplasmic RNA (scRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_encoding","synonyms":[{"name":"scRNA encoding","type":"exact"}],"termid":"SO:0000575"}


id: PBO:0075518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member A","termid":"PBO:0075518"}


id: PBO:0003777
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary name changed","termid":"PBO:0003777"}


id: PBO:0069770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1053, pseudogene","termid":"PBO:0069770"}


id: GO:0072222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric early distal convoluted tubule over time, from its formation to the mature structure. The metanephric early distal convoluted tubule contains metanephric DCT cells and is vasopressin-insensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early distal convoluted tubule development","termid":"GO:0072067"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric early distal convoluted tubule development","termid":"GO:0072222"}


id: GO:0100050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates mating type switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by transcription from RNA polymerase II promoter (obsolete GO:0100050)","termid":"GO:0100050"}


id: FYPO:0004433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to viridicatumtoxin. Cells stop growing (and may die) at a concentration of viridicatumtoxin that allows wild type cells to grow.","definition_xrefs":["PMID:18204818","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to viridicatumtoxin","synonyms":[{"name":"hypersensitive to viridicatumtoxin","type":"exact"},{"name":"sensitive to viridicatumtoxin during mitotic cell cycle","type":"related"},{"name":"sensitive to viridicatumtoxin during vegetative growth","type":"exact"}],"termid":"FYPO:0004433"}


id: GO:0048720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the posterior cibarial plate are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"posterior cibarial plate development","termid":"GO:0048727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior cibarial plate morphogenesis","termid":"GO:0048720"}


id: GO:0032329
data:
  {"annotated_genes":["SJAG_04588","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[64759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[86734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine, 2-amino-3-hydroxypropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"serine transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0090478"],"synonyms":[{"name":"serine import","type":"narrow"}],"termid":"GO:0032329","terms_by_termid":{"GO:0015825":null,"GO:0090516":null,"GO:0140300":null}}


id: PBO:0069610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 887, pseudogene","termid":"PBO:0069610"}


id: PR:P79005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere length regulator taz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.07c","synonyms":[{"name":"Spom972h-taz1","type":"exact"}],"termid":"PR:P79005"}


id: GO:0019848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts to inhibit neural function in another organism by inhibiting voltage-gated calcium ion channels and neurotransmitter release. This function is thought to be specific to the venom of two marine snail species.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete conotoxin activity (obsolete GO:0019848)","synonyms":[{"name":"conotoxin activity","type":"exact"}],"termid":"GO:0019848"}


id: SO:1000079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000079 sequence_variation_affecting_transcript_sequence (obsolete SO:1000079)","synonyms":[{"name":"mutation affecting transcript sequence","type":"exact"},{"name":"sequence variation affecting transcript sequence","type":"exact"}],"termid":"SO:1000079"}


id: PBO:0089531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly protein Iba57","termid":"PBO:0089531"}


id: PBO:0080853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 2","termid":"PBO:0080853"}


id: GO:2000981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mechanoreceptor differentiation","termid":"GO:0045632"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"negatively_regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inner ear receptor cell differentiation","synonyms":[{"name":"negative regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000981"}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains. In Saccharomyces cerevisiae, the complex comprises Ubc13p and Mms2p; in human it comprises UBE2N and UBE2V1/UBE2V2; and in plants UBC35/UBC36 and UEV1A/UEV1B/UEV1C/UEV1D-4.","definition_xrefs":["PMID:15772086","PMID:16129784","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UBC13-MMS2 complex","synonyms":[{"name":"BEN-UEV1A complex","type":"exact"},{"name":"UBE2N/UBE2NL complex","type":"narrow"},{"name":"UBE2V1/UBE2V2 complex","type":"narrow"},{"name":"Uev1A-ben complex","type":"narrow"},{"name":"ubc-13-uev-1 complex","type":"narrow"}],"termid":"GO:0031372"}


id: PBO:0044190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin C","termid":"PBO:0044190"}


id: PBO:0042537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 6","termid":"PBO:0042537"}


id: PBO:0109278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3113","termid":"PBO:0109278"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: PBO:0076529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 42","termid":"PBO:0076529"}


id: GO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new inner ear sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation involved in inner ear sensory epithelium regeneration","termid":"GO:0070660"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: PBO:0063937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 2","termid":"PBO:0063937"}


id: MOD:00143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["ChEBI:17627","PubMed:8827449","PubMed:5545094","RESID:AA0134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme-bis-L-cysteine","synonyms":[{"name":"(7,12-bis[(1S)-1-([(2R)-2-amino-2-carboxyethyl]sulfanyl)ethyl]-3,8,13,17-tetramethyl-21H,23H-porphine-2,18-bis[2-carboxyethyl]-N21,N22,N23,N24)-ferrate","type":"exact"},{"name":"2,4-bis[1-(S-cysteinyl)ethyl]protoporphyrin IX","type":"exact"},{"name":"BINDING Heme (covalent)","type":"exact"},{"name":"HemeCys2","type":"exact"},{"name":"biscysteinyl heme","type":"exact"},{"name":"heme-bis-L-cysteine","type":"exact"}],"termid":"MOD:00143"}


id: GO:2000416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil migration","termid":"GO:2000416"}


id: PBO:0051369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-15","termid":"PBO:0051369"}


id: SO:0000807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_tag","synonyms":[{"name":"engineered tag","type":"exact"}],"termid":"SO:0000807"}


id: PBO:0038956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adiponectin receptor 2","termid":"PBO:0038956"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: GO:1904355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere capping.","definition_xrefs":["GOC:TermGenie","PMID:23959892","GOC:BHF","GO_REF:0000058","GOC:nc","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere capping","termid":"GO:1904353"},{"relation_name":"positively_regulates","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere capping","synonyms":[{"name":"activation of telomere capping","type":"narrow"},{"name":"activation of telomere end protection","type":"narrow"},{"name":"positive regulation of telomere end protection","type":"exact"},{"name":"up regulation of telomere capping","type":"exact"},{"name":"up regulation of telomere end protection","type":"exact"},{"name":"up-regulation of telomere capping","type":"exact"},{"name":"up-regulation of telomere end protection","type":"exact"},{"name":"upregulation of telomere capping","type":"exact"},{"name":"upregulation of telomere end protection","type":"exact"}],"termid":"GO:1904355"}


id: GO:0160166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoadipate + H+ + N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase] = CO2 + N(6)-[(R)-S(8)-glutaryldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase].","definition_xrefs":["PMID:29191460","PMID:32695416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-oxoadipate dehydrogenase activity","secondary_identifiers":["RHEA:69576"],"termid":"GO:0160166"}


id: FYPO:0004631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis I","termid":"FYPO:0004938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiotic anaphase I","synonyms":[{"name":"decreased protein accumulation during meiotic anaphase I","type":"related"},{"name":"decreased protein level during anaphase of first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0004631"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: GO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an innate immune response.","definition_xrefs":["PMID:11418339","PMID:28105028","GOC:jy","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response-activating signaling pathway","secondary_identifiers":["GO:0010204","GO:0009870"],"synonyms":[{"name":"defence response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signaling pathway, resistance gene-independent","type":"related"},{"name":"defence response signalling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signalling pathway, resistance gene-independent","type":"related"},{"name":"defense response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defense response signaling pathway, resistance gene-independent","type":"related"},{"name":"defense response signalling pathway, resistance gene-dependent","type":"related"},{"name":"effector triggered immunity","type":"broad"},{"name":"effector-triggered immune signaling","type":"related"},{"name":"effector-triggered immunity","type":"broad"}],"termid":"GO:0002758"}


id: PBO:0059206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X13, pseudogene","termid":"PBO:0059206"}


id: PBO:0063356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCOTH pseudogene 1","termid":"PBO:0063356"}


id: SO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyladenosine","secondary_identifiers":["RNAMOD:001"],"synonyms":[{"name":"1-methyladenosine","type":"exact"},{"name":"m1A","type":"exact"},{"name":"one methyladenosine","type":"exact"}],"termid":"SO:0001295"}


id: GO:0052761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-(1->4)-D-glucosamine]n-[N-acetyl-D-glucosamine]m = D-glucosamine + [beta-(1->4)-D-glucosamine](n-1)-[N-acetyl-D-glucosamine]m. This reaction is the hydrolysis of chitosan or chitosan oligosaccharides to remove a D-glucosamine residue from the non-reducing termini; chitosan is a linear polysaccharide composed of randomly distributed beta-(1->4)-linked D-glucosamine and N-acetyl-D-glucosamine units.","definition_xrefs":["EC:3.2.1.165","GOC:mengo_curators","MetaCyc:3.2.1.165-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"exo-1,4-beta-D-glucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R08715"],"synonyms":[{"name":"chitosan exo-1,4-beta-D-glucosaminidase activity","type":"exact"},{"name":"chitosan glucosaminohydrolase activity","type":"exact"},{"name":"exo-beta-D-glucosaminidase activity","type":"related"},{"name":"exochitosanase activity","type":"related"}],"termid":"GO:0052761"}


id: GO:0047006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone.","definition_xrefs":["EC:1.1.1.149","MetaCyc:1.1.1.149-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"17-alpha,20-alpha-dihydroxypregn-4-en-3-one dehydrogenase activity","synonyms":[{"name":"20alpha-HSD","type":"related"},{"name":"20alpha-HSDH","type":"related"},{"name":"20alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"20alpha-hydroxysteroid:NAD(P)+ 20-oxidoreductase activity","type":"broad"}],"termid":"GO:0047006"}


id: GO:0033107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytosolic vesicle that is enclosed by a double membrane and is implicated in the cytoplasm to vacuole targeting pathway. These vesicles are found in the yeast S. cerevisiae, and contain vacuolar hydrolases, aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p).","definition_xrefs":["PMID:15138258","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Cvt vesicle","synonyms":[{"name":"cytoplasm to vacuole targeting vesicle","type":"exact"},{"name":"cytoplasm-to-vacuole targeting vesicle","type":"exact"}],"termid":"GO:0033107"}


id: PBO:0056808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD4A antisense RNA 1","termid":"PBO:0056808"}


id: PBO:0057033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-1","termid":"PBO:0057033"}


id: PBO:0061910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AB member 1 pseudogene","termid":"PBO:0061910"}


id: GO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus.","definition_xrefs":["GOC:dph","PMID:9920659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conditioned taste aversion","secondary_identifiers":["Wikipedia:Conditioned_taste_aversion","Wikipedia:Taste_aversion"],"termid":"GO:0001661"}


id: GO:0060260
data:
  {"annotated_genes":["SJAG_00904","SJAG_01403","SJAG_03622","SJAG_01952","SJAG_00909","SJAG_05341","SJAG_03061","SJAG_03573","SJAG_01771","SJAG_00766","SJAG_02494","SJAG_04705","SJAG_04099","SJAG_04647","SJAG_00150","SJAG_04820","SJAG_02551","SJAG_03421","SJAG_03590","SJAG_02849","SJAG_00342","SJAG_02391","SJAG_00297","SJAG_05203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85836,111253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[99779,91487,105114,110797,86797,99517,102118,102311,83594,95123,104800,94774,90445,101767,111362,114967,98053,91966,86487,104827,90556,102443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060260","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0006878
data:
  {"annotated_genes":["SJAG_04403","SJAG_02399","SJAG_01694","SJAG_00802","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73815,89228,92384,96252,103935],"is_not":false,"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of copper ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"copper ion homeostasis","termid":"GO:0055070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular copper ion homeostasis","type":"exact"},{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0006878","terms_by_termid":{"GO:0006878":null}}


id: PBO:0085139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for rRNA synthesis and ribosomal assembly; required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit; essential gene","termid":"PBO:0085139"}


id: PBO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase (predicted)","termid":"PBO:0001112"}


id: PBO:0091293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA initiator Methionine","termid":"PBO:0091293"}


id: GO:0006080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mannan backbone composed of D-mannose unites, substituted with D-glucose and/or D-galactose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"substituted mannan metabolic process","synonyms":[{"name":"substituted mannan metabolism","type":"exact"}],"termid":"GO:0006080"}


id: PBO:0072796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 2","termid":"PBO:0072796"}


id: PBO:0051941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B pseudogene 1","termid":"PBO:0051941"}


id: PBO:0082197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoicase; converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082197"}


id: PATO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An optical quality where light rays originating from a point on the object converge.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Focus_(optics)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus","termid":"PATO:0001516"}


id: PR:O14138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25A8.03c gene.","definition_xrefs":["UniProtKB:O14138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.03c","synonyms":[{"name":"Spom972h-SPAC25A8.03c","type":"exact"},{"name":"protein midA homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14138"}


id: PBO:0030249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level","termid":"PBO:0030249"}


id: PBO:0030522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_spindle_assembly","termid":"PBO:0030522"}


id: PBO:0051892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA2 antisense RNA 1","termid":"PBO:0051892"}


id: PBO:0070043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1340, pseudogene","termid":"PBO:0070043"}


id: PBO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin depolymerizing factor, cofilin","termid":"PBO:0002706"}


id: PBO:0079119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor susceptibility 101","termid":"PBO:0079119"}


id: PBO:0028289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cadmium_ion_import_into_vacuole","termid":"PBO:0028289"}


id: PBO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 14","termid":"PBO:0047360"}


id: GO:0033952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose-2-sulfate in iota-carrageenans.","definition_xrefs":["EC:3.2.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"iota-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.157-RXN"],"synonyms":[{"name":"iota-carrageenan 4-beta-D-glycanohydrolase (configuration-inverting) activity","type":"related"}],"termid":"GO:0033952"}


id: GO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4atac/U6atac and U5 snRNPs.","definition_xrefs":["GOC:krc","GOC:mah","GOC:pr","ISBN:0879695897","PMID:16201866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U4atac/U6atac x U5 tri-snRNP complex","synonyms":[{"name":"U4atac/U6atac.U5 snRNP complex","type":"exact"}],"termid":"GO:0071009"}


id: SO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_processed_pseudogene","termid":"SO:0001760"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_unprocessed_pseudogene","synonyms":[{"name":"translated unprocessed pseudogene","type":"exact"},{"name":"translated_nonprocessed_pseudogene","type":"exact"}],"termid":"SO:0002106"}


id: MOD:01601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-121 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01601"}


id: PBO:0075355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 3","termid":"PBO:0075355"}


id: PBO:0046507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERICH2 divergent transcript","termid":"PBO:0046507"}


id: RO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that applies between a cell(c) and a gene(g) , where the process of 'transcription, DNA templated (GO_0006351)' is occuring in in cell c and that process has input gene g.","direct_ancestors":[{"relation_name":"is_a","term_name":"expresses","termid":"RO:0002292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell_expresses","termid":"RO:0002009"}


id: PBO:0043282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member F","termid":"PBO:0043282"}


id: PBO:0090604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw1","termid":"PBO:0090604"}


id: PBO:0065904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab acceptor 1","termid":"PBO:0065904"}


id: GO:0034745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Rac1, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"APC-IQGAP1-Rac1 complex","termid":"GO:0034745"}


id: PBO:0064421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepronociceptin","termid":"PBO:0064421"}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: PBO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1 associated protein 1","termid":"PBO:0045103"}


id: PBO:0064448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan like 1","termid":"PBO:0064448"}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: GO:0023062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via transcytosis. Transcytosis is the directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.","definition_xrefs":["GOC:mtg_signal","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via transcytosis (obsolete GO:0023062)","synonyms":[{"name":"signal transmission via transcytosis","type":"exact"}],"termid":"GO:0023062"}


id: PBO:0046311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease V","termid":"PBO:0046311"}


id: PBO:0050162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 18","termid":"PBO:0050162"}


id: PR:Q9US48
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycosylphosphatidylinositol anchor attachment 1 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR13304:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component gaa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.11","secondary_identifiers":["UniProtKB:Q9US48"],"synonyms":[{"name":"SPAC1002.11","type":"related"},{"name":"Spom972h-GPAA1","type":"exact"}],"termid":"PR:Q9US48"}


id: GO:0004414
data:
  {"annotated_genes":["SJAG_00395","SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97988,107168],"is_not":false,"summary":null,"term":"GO:0004414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + acetyl-CoA = O-acetyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.31","RHEA:13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homoserine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01776","MetaCyc:HOMOSERINE-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"homoserine acetyltransferase activity","type":"related"},{"name":"L-homoserine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-homoserine O-acetyltransferase activity","type":"related"},{"name":"homoserine O-trans-acetylase activity","type":"related"},{"name":"homoserine transacetylase activity","type":"broad"},{"name":"homoserine-O-transacetylase activity","type":"related"}],"termid":"GO:0004414","terms_by_termid":{"GO:0004414":null}}


id: GO:0047124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,5S)-3,5-diaminohexanoate + H2O + NAD+ = (S)-5-amino-3-oxo-hexanoate + H+ + NADH + NH4.","definition_xrefs":["RHEA:19633","EC:1.4.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-erythro-3,5-diaminohexanoate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03349","MetaCyc:1.4.1.11-RXN"],"synonyms":[{"name":"L-3,5-diaminohexanoate dehydrogenase activity","type":"related"},{"name":"L-erythro-3,5-diaminohexanoate:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047124"}


id: PBO:0077109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17A","termid":"PBO:0077109"}


id: GO:0035312
data:
  {"annotated_genes":["SJAG_03734","SJAG_04410","SJAG_01832","SJAG_01173","SJAG_01648","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84535,89094,93231],"is_not":false,"summary":null,"term":"GO:0035312"},{"annotations":[111744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[103844,93234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[93236,107664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a DNA molecule.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' exonuclease activity","termid":"GO:0008409"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0004527","GO:0003674","GO:0016788","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"5'-3' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-3' exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0035312","terms_by_termid":{"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: GO:0032607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interferon-alpha production","secondary_identifiers":["GO:0072642","GO:0045349"],"synonyms":[{"name":"IFN-alpha production","type":"exact"},{"name":"IFNA production","type":"exact"},{"name":"interferon-alpha biosynthetic process","type":"narrow"},{"name":"interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032607"}


id: PBO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase, involved in iron-sulphur cluster assembly Tah18 (predicted)","termid":"PBO:0000556"}


id: GO:0046992
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"narrow"}],"termid":"GO:0046992","terms_by_termid":{"GO:0061686":null}}


id: GO:0005375
data:
  {"annotated_genes":["SJAG_01493","SJAG_03079","SJAG_02399","SJAG_01119","SJAG_04246"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61566,84084,97579,110657],"is_not":false,"summary":null,"term":"GO:0005375"},{"annotations":[103939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[103940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of copper (Cu) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"copper ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-437300","RHEA:28703","GO:0005378","GO:0005379","GO:0005380","GO:0015088"],"synonyms":[{"name":"copper uptake transmembrane transporter activity","type":"related"},{"name":"intracellular copper ion transporter","type":"narrow"},{"name":"plasma membrane copper transporter","type":"narrow"}],"termid":"GO:0005375","terms_by_termid":{"GO:0005375":null,"GO:0043682":null,"GO:0140581":null}}


id: GO:0055106
data:
  {"annotated_genes":["SJAG_03858","SJAG_00666","SJAG_04699","SJAG_03809","SJAG_01051","SJAG_04853","SJAG_00071","SJAG_01515","SJAG_02485"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111012,98390,96237,84826,85081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"},{"annotations":[94794,111618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[113213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097027"},{"annotations":[110696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01051":null,"SJAG_01515":null,"SJAG_02485":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"ubiquitin-protein transferase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055106","terms_by_termid":{"GO:0055105":null,"GO:0097027":null,"GO:1990757":null,"GO:1990948":null}}


id: FYPO:0000099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: GO:0014898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological enlargement or overgrowth of all or part of the heart muscle due to an increase in size (not length) of individual cardiac muscle fibers, without cell division, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy in response to stress","termid":"GO:0003299"},{"relation_name":"is_a","term_name":"cardiac muscle hypertrophy","termid":"GO:0003300"},{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}


id: GO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a misfolded protein stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:add","PMID:15226511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to misfolded protein","termid":"GO:0051788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of misfolded protein","termid":"GO:0002236"}


id: PBO:0091121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase complex subunit Gta3","termid":"PBO:0091121"}


id: PBO:0063841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase alpha","termid":"PBO:0063841"}


id: SO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ss_oligo","synonyms":[{"name":"single strand oligo","type":"exact"},{"name":"single strand oligonucleotide","type":"exact"},{"name":"single stranded oligonucleotide","type":"exact"},{"name":"ss oligo","type":"exact"},{"name":"ss oligonucleotide","type":"exact"}],"termid":"SO:0000441"}


id: GO:0048508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryonic meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic meristem development","termid":"GO:0048508"}


id: PBO:0052686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 10","termid":"PBO:0052686"}


id: PBO:0003745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator, MBF subunit Rep2","termid":"PBO:0003745"}


id: FYPO:0002694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hygromycin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to hygromycin B","synonyms":[{"name":"resistance to hygromycin B during mitotic cell cycle","type":"related"},{"name":"resistance to hygromycin B during vegetative growth","type":"exact"},{"name":"resistant to hygromycin B","type":"exact"}],"termid":"FYPO:0002694"}


id: PBO:0013118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Spf38","termid":"PBO:0013118"}


id: PR:Q10255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein SPAC56F8.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.07","synonyms":[{"name":"Spom972h-SPAC56F8.07","type":"exact"}],"termid":"PR:Q10255"}


id: GO:0034748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Par3, the tumor suppressor protein adenomatous polyposis coli (APC), and the kinesin-related protein KIF3A; involved in establishing neuronal cell polarity.","definition_xrefs":["PMID:15556865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Par3-APC-KIF3A complex","termid":"GO:0034748"}


id: PBO:0083309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps HMLALPHA1","termid":"PBO:0083309"}


id: GO:0035265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function.","definition_xrefs":["ISBN:0471245208","GOC:bf","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organ growth","termid":"GO:0035265"}


id: PBO:0064472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 3, accessory subunit","termid":"PBO:0064472"}


id: PR:000027543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P36631-1, Thr-173, MOD:00047|Ser-218, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ste11/Phos(T173,S218)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor ste11 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ste11/Phos:1","type":"exact"},{"name":"ste11/Phos(T173,S218)","type":"exact"}],"termid":"PR:000027543"}


id: PBO:0030055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_adenylyl_cyclase_activity","termid":"PBO:0030055"}


id: GO:0030072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a peptide hormone from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peptide hormone secretion","termid":"GO:0030072"}


id: GO:0018863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-9,10-oxide + H2O = trans-9(S),10(S)-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-9,10-epoxide hydrolase (9S,10S-forming) activity (obsolete GO:0018863)","termid":"GO:0018863"}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: PBO:0079557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain containing 1","termid":"PBO:0079557"}


id: MOD:00287
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["Unimod:425#P","DeltaMass:0","PubMed:12686488","RESID:AA0282","ChEBI:141803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated proline","termid":"MOD:00866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-3,4-dihydroxyproline","synonyms":[{"name":"(2S,3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"(2S,3R,4S)-3,4-dihydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"2,3-trans-3,4-cis-3,4-dihydroxy-L-proline","type":"exact"},{"name":"2-alpha-3-beta-4-beta-3,4-dihydroxyproline","type":"exact"},{"name":"3,4-Dihydroxylation (of Proline)","type":"exact"},{"name":"3,4-dihydroxylated L-proline","type":"exact"},{"name":"34Hy2Pro","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"MOD_RES (3R,4S)-3,4-dihydroxyproline","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"trans-2,3-cis-3,4-dihydroxy-L-proline","type":"exact"}],"termid":"MOD:00287"}


id: PBO:0062862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase, ubiquitin aldehyde binding 1","termid":"PBO:0062862"}


id: PR:O13989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26H5.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.07c","synonyms":[{"name":"Spom972h-SPAC26H5.07c","type":"exact"}],"termid":"PR:O13989"}


id: PBO:0057072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 152","termid":"PBO:0057072"}


id: PBO:0013746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase Hem14 (predicted)","termid":"PBO:0013746"}


id: PBO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp11","termid":"PBO:0005174"}


id: PBO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug147","termid":"PBO:0018085"}


id: PBO:0026658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cysteine-type_endopeptidase_activity","termid":"PBO:0026658"}


id: PBO:0066481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refilin B","termid":"PBO:0066481"}


id: PBO:0072648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhotekin 2","termid":"PBO:0072648"}


id: PBO:0070900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 8","termid":"PBO:0070900"}


id: SO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000543 alternately_spliced_gene_encoding_greater_than_one_transcript (obsolete SO:0000543)","termid":"SO:0000543"}


id: SOFP:missing_stop_codon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"true if end of CDS is unknown","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missing_stop_codon","termid":"SOFP:missing_stop_codon"}


id: GO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.","definition_xrefs":["ISBN:0815316194","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"pericentriolar material","termid":"GO:0000242"}


id: PBO:0072319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 5","termid":"PBO:0072319"}


id: PBO:0051471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-70 (pseudogene)","termid":"PBO:0051471"}


id: PBO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere","termid":"PBO:0030981"}


id: PBO:0072911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAND3 pseudogene 1","termid":"PBO:0072911"}


id: GO:0009342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase (NADPH) activity.","definition_xrefs":["GOC:mah","PMID:4565085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex (NADPH)","termid":"GO:0009342"}


id: GO:0050373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-L-arabinose = UDP-alpha-D-xylose.","definition_xrefs":["RHEA:11320","EC:5.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-arabinose 4-epimerase activity","secondary_identifiers":["MetaCyc:UDP-ARABINOSE-4-EPIMERASE-RXN","KEGG_REACTION:R01473"],"synonyms":[{"name":"UDP arabinose epimerase activity","type":"related"},{"name":"UDP-D-xylose 4-epimerase activity","type":"related"},{"name":"UDP-D-xylose-4-epimerase activity","type":"exact"},{"name":"UDP-L-arabinose 4-epimerase activity","type":"related"},{"name":"UDParabinose 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphosphate-D-xylose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoarabinose epimerase activity","type":"related"}],"termid":"GO:0050373"}


id: PBO:0003011
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.27","termid":"PBO:0003011"}


id: GO:0120275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products.","definition_xrefs":["GOC:krc","PMID:25397684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral blood circulation","synonyms":[{"name":"cerebrum blood circulation","type":"exact"},{"name":"telencephelon blood circulation","type":"exact"}],"termid":"GO:0120275"}


id: PBO:0071137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 like 1","termid":"PBO:0071137"}


id: PBO:0035731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion_during_vegetative_growth","termid":"PBO:0035731"}


id: PBO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120B","termid":"PBO:0047062"}


id: GO:0032237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that initiates the activity of an inactive store-operated calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of store-operated calcium channel activity","termid":"GO:1901341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"activation of store-operated calcium channel activity","termid":"GO:0032237"}


id: PBO:0031620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transposition","termid":"PBO:0031620"}


id: PBO:0075887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2","termid":"PBO:0075887"}


id: PBO:0067136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 184, pseudogene","termid":"PBO:0067136"}


id: FYPO:0003953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which triglyceride biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal triglyceride biosynthetic process","synonyms":[{"name":"abnormal TAG biosynthetic process","type":"exact"},{"name":"abnormal triacylglycerol biosynthesis","type":"exact"},{"name":"abnormal triacylglycerol biosynthetic process","type":"exact"},{"name":"abnormal triglyceride biosynthesis","type":"exact"},{"name":"abnormal triglyceride biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal triglyceride biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0003953"}


id: GO:0006177
data:
  {"annotated_genes":["SJAG_00964","SJAG_01298","SJAG_06634","SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59024,97288,104351],"is_not":false,"summary":null,"term":"GO:0006177"},{"annotations":[89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP anabolism","type":"exact"},{"name":"GMP biosynthesis","type":"exact"},{"name":"GMP formation","type":"exact"},{"name":"GMP synthesis","type":"exact"}],"termid":"GO:0006177","terms_by_termid":{"GO:0006177":null,"GO:0032263":null}}


id: GO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cobalamin binding","synonyms":[{"name":"vitamin B12 binding","type":"exact"}],"termid":"GO:0031419"}


id: GO:0032967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"positively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen biosynthetic process","synonyms":[{"name":"positive regulation of collagen anabolism","type":"exact"},{"name":"positive regulation of collagen biosynthesis","type":"exact"},{"name":"positive regulation of collagen formation","type":"exact"},{"name":"positive regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032967"}


id: PBO:0031164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamine_import","termid":"PBO:0031164"}


id: GO:1904414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac ventricle development.","definition_xrefs":["PMID:19590510","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac ventricle development","termid":"GO:1904412"},{"relation_name":"positively_regulates","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac ventricle development","synonyms":[{"name":"activation of cardiac ventricle development","type":"narrow"},{"name":"up regulation of cardiac ventricle development","type":"exact"},{"name":"up-regulation of cardiac ventricle development","type":"exact"},{"name":"upregulation of cardiac ventricle development","type":"exact"}],"termid":"GO:1904414"}


id: SO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding alanyl tRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine_tRNA_primary_transcript","synonyms":[{"name":"alanine tRNA primary transcript","type":"exact"}],"termid":"SO:0000211"}


id: GO:0043112
data:
  {"annotated_genes":["SJAG_03324","SJAG_02619","SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97402,113364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016562"},{"annotations":[98757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001881"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_02619":null,"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor metabolism","type":"exact"}],"termid":"GO:0043112","terms_by_termid":{"GO:0001881":null,"GO:0016562":null}}


id: PBO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization","termid":"PBO:0035819"}


id: PBO:0028097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0028097"}


id: PBO:0038610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 6","termid":"PBO:0038610"}


id: PBO:0057662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255a","termid":"PBO:0057662"}


id: PBO:0004747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex subunit Snf59","termid":"PBO:0004747"}


id: PBO:0086081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose from dolichyl phosphate-D-mannose to protein serine/threonine residues of secretory proteins; reaction is essential for cell wall rigidity; member of a family of mannosyltransferases","termid":"PBO:0086081"}


id: PBO:0060042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 30","termid":"PBO:0060042"}


id: PBO:0075058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-21","termid":"PBO:0075058"}


id: PATO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fluorescence quality inhering in a bearer by virtue of emitting light during exposure to radiation from an external source.","definition_xrefs":["web:www.thefreedictionary.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescence","termid":"PATO:0000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescent","termid":"PATO:0001290"}


id: PBO:0054747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2156","termid":"PBO:0054747"}


id: FYPO:0003831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the cytokinesis after mitosis checkpoint does not occur. The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis checkpoint","termid":"FYPO:0003830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished response to cytokinesis checkpoint signaling","synonyms":[{"name":"abolished cytokinesis after mitosis checkpoint","type":"related"},{"name":"abolished cytokinesis checkpoint activation","type":"related"},{"name":"abolished cytokinesis checkpoint arrest","type":"related"},{"name":"abolished response to cytokinesis after mitosis checkpoint signaling","type":"exact"},{"name":"abolished response to mitotic cell cycle cytokinesis checkpoint signaling","type":"exact"},{"name":"cell cycle arrest resulting from cytokinesis checkpoint activation abolished","type":"exact"}],"termid":"FYPO:0003831"}


id: GO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyl-2-oxobutanoate + CoA + oxidized ferredoxin = S-(2-methylpropanoyl)-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) activity","secondary_identifiers":["RHEA:11712","MetaCyc:1.2.7.7-RXN"],"synonyms":[{"name":"2-ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"2-oxoisovalerate ferredoxin reductase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate synthase (ferredoxin) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:ferredoxin oxidoreductase (decarboxylating; CoA-2-methylpropanoylating)","type":"exact"},{"name":"VOR","type":"related"},{"name":"branched-chain ketoacid ferredoxin reductase activity","type":"related"},{"name":"branched-chain oxo acid ferredoxin reductase activity","type":"related"},{"name":"keto-valine-ferredoxin oxidoreductase activity","type":"related"},{"name":"ketoisovalerate ferredoxin reductase activity","type":"related"},{"name":"ketoisovalerate oxidoreductase activity","type":"related"}],"termid":"GO:0043807"}


id: FYPO:0001248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal regulation of DNA replication initiation","termid":"FYPO:0004756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation","synonyms":[{"name":"abnormal regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0001248"}


id: GO:1901700
data:
  {"annotated_genes":["SJAG_04953","SJAG_01199","SJAG_03653","SJAG_04312","SJAG_03303","SJAG_01858","SJAG_00574","SJAG_04403","SJAG_06611","SJAG_01699","SJAG_01254","SJAG_03081","SJAG_00141","SJAG_01457","SJAG_05181","SJAG_01216","SJAG_05256","SJAG_00668","SJAG_02515","SJAG_01162","SJAG_02444","SJAG_04823","SJAG_01754","SJAG_02960","SJAG_04788","SJAG_04399","SJAG_03032","SJAG_01734","SJAG_00472","SJAG_02010","SJAG_04632","SJAG_04026"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102921,111590,105091,90333,105597,112634,102564,97941,101977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[108807],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[113423,114326,101117,104909,91300,96094],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[101120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[109575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[101299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[96095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[91641,99577],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[96254,106214,89229,106169,95370,57920,64555,67613,85114,85529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[91816,89648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_01858":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03032":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901700","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0034614":null,"GO:0036245":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0073762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 pseudogene 1","termid":"PBO:0073762"}


id: PBO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus splice sites","termid":"PBO:0003021"}


id: PR:B5BP45
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cystine/glutamate transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C460.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC460.01c","secondary_identifiers":["UniProtKB:B5BP45"],"synonyms":[{"name":"Spom972h-SLC7A11","type":"exact"}],"termid":"PR:B5BP45"}


id: MOD:00851
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deamidated residue","termid":"MOD:00851"}


id: GO:0009198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxynucleoside diphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009192"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009198"}


id: PATO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castrated male","termid":"PATO:0002367"}


id: PBO:0047065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member B","termid":"PBO:0047065"}


id: FYPO:0002264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of one or more polysaccharides released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of polysaccharide in growth medium","synonyms":[{"name":"increased concentration of polysaccharides in growth medium","type":"exact"},{"name":"increased level of polysaccharide in growth medium","type":"exact"},{"name":"increased release of polysaccharide into growth medium","type":"related"}],"termid":"FYPO:0002264"}


id: GO:0047213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin + UDP-D-glucose = anthocyanidin-3-O-D-glucoside + UDP.","definition_xrefs":["MetaCyc:2.4.1.115-RXN","EC:2.4.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"anthocyanidin 3-O-glucosyltransferase activity","secondary_identifiers":["RHEA:20093"],"synonyms":[{"name":"3-GT activity","type":"related"},{"name":"UDP-D-glucose:anthocyanidin 3-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin 3-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanidin/flavonol 3-O-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-anthocyanidin 3-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047213"}


id: FYECO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cerulenin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cerulenin","termid":"FYECO:0000336"}


id: GO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template.","definition_xrefs":["GOC:elh","PMID:9334324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA repair synthesis","termid":"GO:0000711"}


id: PBO:0081344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 146","termid":"PBO:0081344"}


id: PBO:0073915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 5","termid":"PBO:0073915"}


id: GO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate = glyoxylate + succinate.","definition_xrefs":["EC:4.1.3.1","RHEA:13245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"isocitrate lyase activity","secondary_identifiers":["KEGG_REACTION:R00479","MetaCyc:ISOCIT-CLEAV-RXN"],"synonyms":[{"name":"ICL activity","type":"related"},{"name":"isocitrase activity","type":"related"},{"name":"isocitratase activity","type":"related"},{"name":"isocitrate glyoxylate-lyase (succinate-forming)","type":"related"},{"name":"isocitrate glyoxylate-lyase activity","type":"related"},{"name":"isocitritase activity","type":"related"},{"name":"threo-DS-isocitrate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0004451"}


id: PBO:0079332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 18","termid":"PBO:0079332"}


id: PBO:0075408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5B","termid":"PBO:0075408"}


id: PBO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0017600"}


id: PBO:0043412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 1","termid":"PBO:0043412"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: GO:0050810
data:
  {"annotated_genes":["SJAG_02044","SJAG_04018","SJAG_02104","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[84703,84704,101913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of steroid anabolism","type":"exact"},{"name":"regulation of steroid biosynthesis","type":"exact"},{"name":"regulation of steroid formation","type":"exact"},{"name":"regulation of steroid synthesis","type":"exact"},{"name":"regulation of steroidogenesis","type":"exact"}],"termid":"GO:0050810","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein (predicted)","termid":"PBO:0000606"}


id: PBO:0074750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 109","termid":"PBO:0074750"}


id: GO:0140115
data:
  {"annotated_genes":["SJAG_04167","SJAG_03951","SJAG_01541","SJAG_00233","SJAG_01183","SJAG_01669","SJAG_03363","SJAG_01129","SJAG_01145","SJAG_04258","SJAG_02602","SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[109816,96918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[103265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090539"},{"annotations":[111855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[108421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[83838,109847,92841,83837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120029"},{"annotations":[92843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[113995,92595,113085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of some substance from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_01129":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_01973":null,"SJAG_02602":null,"SJAG_03363":null,"SJAG_03951":null,"SJAG_04167":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"efflux","type":"broad"}],"termid":"GO:0140115","terms_by_termid":{"GO:0036376":null,"GO:0090539":null,"GO:0097623":null,"GO:0120029":null,"GO:0140116":null,"GO:0140159":null,"GO:0180029":null,"GO:1990961":null}}


id: FYPO:0002103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has one nucleus and one septum, and is swollen and inviable. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell","termid":"FYPO:0002414"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0000641"],"is_obsolete":false,"name":"inviable swollen mononucleate monoseptate vegetative cell","synonyms":[{"name":"inviable enlarged mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable large mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with increased cell volume","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell","type":"exact"},{"name":"inviable swollen mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable swollen mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002103"}


id: PBO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 112","termid":"PBO:0071110"}


id: PBO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase","termid":"PBO:0070420"}


id: PBO:0062445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 110 pseudogene","termid":"PBO:0062445"}


id: GO:0042772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cascade of processes initiated in response to the detection of DNA damage, and resulting in the induction of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"DNA damage response, signal transduction resulting in transcription","termid":"GO:0042772"}


id: GO:0102036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tetrahydrofolate + a [methyl-Co(III) corrinoid Fe-S protein] = an N5-methyl-tetrahydrofolate + a [Co(I) corrinoid Fe-S protein].","definition_xrefs":["GOC:pz","PMID:7928975","EC:2.1.1.258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity","secondary_identifiers":["MetaCyc:METHCOCLTH-RXN","RHEA:45200"],"termid":"GO:0102036"}


id: PBO:0047569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 20","termid":"PBO:0047569"}


id: PBO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 27","termid":"PBO:0071304"}


id: PBO:0080465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 1","termid":"PBO:0080465"}


id: GO:0032206
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance","type":"narrow"},{"name":"stimulation of telomere maintenance","type":"narrow"},{"name":"up regulation of telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance","type":"exact"}],"termid":"GO:0032206","terms_by_termid":{"GO:0032215":null}}


id: PBO:0040282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 2","termid":"PBO:0040282"}


id: PR:Q9P793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mit1 gene.","definition_xrefs":["UniProtKB:Q9P793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin remodeling factor mit1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.10","synonyms":[{"name":"Mi2-like interacting with clr3 protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SHREC protein mit1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mit1","type":"exact"},{"name":"snf2/Hdac-containing repressor complex protein mit1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P793"}


id: GO:0032223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, cholinergic","synonyms":[{"name":"down regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"down-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"downregulation of synaptic transmission, cholinergic","type":"exact"},{"name":"inhibition of synaptic transmission, cholinergic","type":"narrow"}],"termid":"GO:0032223"}


id: PBO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position ade5","termid":"PBO:0005861"}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: GO:0032089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NACHT (NAIP, CIITA, HET-E and TP1) domain. The NACHT domain consists of seven distinct conserved motifs, including an ATP/GTPase specific P-loop, a Mg2+-binding site and five more specific motifs.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"NACHT domain binding","termid":"GO:0032089"}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: GO:0061913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061913"}


id: PR:Q9Y7S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.05c gene.","definition_xrefs":["UniProtKB:Q9Y7S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C569.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.05c","synonyms":[{"name":"Spom972h-SPCC569.05c","type":"exact"}],"termid":"PR:Q9Y7S4"}


id: PBO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 family protein","termid":"PBO:0004680"}


id: PBO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 1","termid":"PBO:0046014"}


id: PBO:0083477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene STE3","termid":"PBO:0083477"}


id: FYPO:0000627
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115587,115588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[115407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[115136,115133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000579"},{"annotations":[115132,115135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"},{"annotations":[115578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01143":null,"SJAG_01355":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal cellular process","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_01143","SJAG_00601","SJAG_01355","SJAG_04883"],"single_locus_genotype_uniquenames":["cox6delta","dcr1delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","rip1delta","ptp4delta"],"termid":"FYPO:0000627","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: GO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"chemical cardiac inotropy","type":"exact"},{"name":"regulation of the force of heart muscle contraction by chemical signal","type":"related"}],"termid":"GO:0003057"}


id: GO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac left ventricular trabecular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003220"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular trabecular myocardium morphogenesis","termid":"GO:0003225"}


id: GO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glycine modification","termid":"GO:0018201"}


id: GO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in axon guidance.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"regulates","term_name":"axon extension involved in axon guidance","termid":"GO:0048846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in axon guidance","termid":"GO:0048841"}


id: PBO:0036535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron hydrogenase Nar1 (predicted)","termid":"PBO:0036535"}


id: GO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"cytokine production","secondary_identifiers":["GO:0042107","GO:0050663","GO:0042089","GO:0042032"],"synonyms":[{"name":"cytokine biosynthetic process","type":"narrow"},{"name":"cytokine metabolic process","type":"narrow"},{"name":"cytokine secretion","type":"narrow"},{"name":"interferon production","type":"narrow"},{"name":"interferon secretion","type":"narrow"},{"name":"interleukin production","type":"narrow"},{"name":"interleukin secretion","type":"narrow"}],"termid":"GO:0001816"}


id: PBO:0059196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X3","termid":"PBO:0059196"}


id: PBO:0084981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear NAD-RNAs; also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0084981"}


id: PBO:0089197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase Sdh1","termid":"PBO:0089197"}


id: PBO:0086945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for alpha-factor pheromone; seven transmembrane-domain GPCR that interacts with both pheromone and a heterotrimeric G protein to initiate the signaling response that leads to mating between haploid a and alpha cells","termid":"PBO:0086945"}


id: GO:0070447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"positive regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070447"}


id: PBO:0078576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 52","termid":"PBO:0078576"}


id: GO:1900465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular arginine catabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:19233144","PMID:8455631"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900465)","synonyms":[{"name":"negative regulation of arginine breakdown by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine catabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine degradation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900465"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferrileghemoglobin = NADP+ + 2 ferroleghemoglobin.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"leghemoglobin reductase activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"}],"termid":"GO:0015043"}


id: MOD:00182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to L-bromohistidine.","definition_xrefs":["PubMed:2076468","PubMed:9033387","Unimod:340#H","RESID:AA0173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated histidine","termid":"MOD:01049"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-bromohistidine","synonyms":[{"name":"Br1His","type":"exact"},{"name":"Bromo","type":"related"},{"name":"L-bromohistidine","type":"exact"},{"name":"MOD_RES Bromohistidine","type":"exact"},{"name":"bromination","type":"related"}],"termid":"MOD:00182"}


id: GO:0102782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + epidihydrocholesterin + O2 + NADPH = (22alpha)-hydroxy-cholestanol + H2O + NADP.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholestanol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7878"],"termid":"GO:0102782"}


id: PBO:0000217
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during M-G1 phase","termid":"PBO:0000217"}


id: PBO:0056306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 2","termid":"PBO:0056306"}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: GO:0141199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.","definition_xrefs":["PMID:21273394","PMID:9287314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process from glucose","secondary_identifiers":["MetaCyc:PWY-5659"],"termid":"GO:0141199"}


id: GO:2000593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metanephric DCT cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of metanephric DCT cell differentiation","termid":"GO:2000592"},{"relation_name":"negatively_regulates","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric DCT cell differentiation","synonyms":[{"name":"negative regulation of metanephric distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:2000593"}


id: PR:000044505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein ypt5 (Schizosaccharomyces pombe) that is prenylated with Geranylgeranyl moieties on the Cys residues within the CxC motif. In addition, the C-terminal Cys is further methylated. Example: UniProtKB:P36586-1, Cys-209/Cys-211, MOD:00113|Cys-211, MOD:00114.","definition_xrefs":["PMID:8226998","PomBase:MAH","PMID:1597466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","termid":"PR:000030005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt5 methylated and prenylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"SpYPT5p prenylated","type":"related"}],"termid":"PR:000044505"}


id: PBO:0061516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 6","termid":"PBO:0061516"}


id: GO:0150014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the apical pole of a neuron, and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["GOC:aruk","GO:bc","PMID:9214543","PMID:1720142","PMID:20629984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical distal dendrite","termid":"GO:0150014"}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PomBase:mah","PMID:22718908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: FYPO:0000595
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115579],"is_not":false,"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of transposition is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased rate of transposable element transposition","type":"exact"},{"name":"increased rate of transposition during mitotic cell cycle","type":"related"},{"name":"increased rate of transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: increased rate","type":"related"}],"termid":"FYPO:0000595","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: PBO:0026981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_prospore_membrane_closure","termid":"PBO:0026981"}


id: PBO:0063752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 17","termid":"PBO:0063752"}


id: GO:0097454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small finger-like extension of a Schwann cell that contacts the nodal membrane.","definition_xrefs":["PMID:15988042","NIF_Subcellular:sao1890444066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schwann cell microvillus","termid":"GO:0097454"}


id: PBO:0030247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_freezing","termid":"PBO:0030247"}


id: PBO:0055730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 4","termid":"PBO:0055730"}


id: PBO:0062715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily L member 1","termid":"PBO:0062715"}


id: PBO:0087648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; required for assembly and DNA binding activity of the complex","termid":"PBO:0087648"}


id: GO:2000437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte extravasation","termid":"GO:2000437"}


id: GO:0031502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity; usually includes members of the PMT1 and PMT2 protein subfamilies.","definition_xrefs":["PMID:15948957","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","synonyms":[{"name":"PMT family mannosyltransferase complex","type":"related"},{"name":"protein O-mannosyltransferase complex","type":"exact"}],"termid":"GO:0031502"}


id: GO:0030912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a deep water stimulus, being immersed in standing deep water throughout the life cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to deep water","termid":"GO:0030912"}


id: PBO:0048921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member R","termid":"PBO:0048921"}


id: RO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_modifier","termid":"RO:0002573"}


id: PBO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member J","termid":"PBO:0048915"}


id: PBO:0062422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 83 pseudogene","termid":"PBO:0062422"}


id: PBO:0001239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from cerevisie","termid":"PBO:0001239"}


id: PBO:0034753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family plus-end microtubule motor Klp6","termid":"PBO:0034753"}


id: GO:0035049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group to juvenile hormone acid.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete juvenile hormone acid methyltransferase activity (obsolete GO:0035049)","termid":"GO:0035049"}


id: PBO:0076356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 3","termid":"PBO:0076356"}


id: GO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a steroid ester is formed by the combination of a carboxylic acid (often a fatty acid) and a steroid molecule (e.g. cholesterol).","definition_xrefs":["GOC:mah","GOC:pde","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid esterification (obsolete GO:0034433)","termid":"GO:0034433"}


id: GO:1902281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP-dependent RNA helicase activity.","definition_xrefs":["PMID:23721653","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of helicase activity","termid":"GO:0051097"},{"relation_name":"is_a","term_name":"regulation of RNA helicase activity","termid":"GO:1902280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA helicase activity","synonyms":[{"name":"down regulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"down-regulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"downregulation of ATP-dependent RNA helicase activity","type":"exact"},{"name":"inhibition of ATP-dependent RNA helicase activity","type":"narrow"},{"name":"negative regulation of ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:1902281"}


id: GO:0030812
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72023,75008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of nucleotide catabolic process","type":"exact"},{"name":"down-regulation of nucleotide catabolic process","type":"exact"},{"name":"downregulation of nucleotide catabolic process","type":"exact"},{"name":"inhibition of nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of nucleotide breakdown","type":"exact"},{"name":"negative regulation of nucleotide catabolism","type":"exact"},{"name":"negative regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030812","terms_by_termid":{"GO:0045820":null}}


id: PBO:0050602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD11B1 antisense RNA 1","termid":"PBO:0050602"}


id: GO:0033187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate, and ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["PMID:17412958","PMID:17412959"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate 4-kinase or 6-kinase activity (obsolete GO:0033187)","synonyms":[{"name":"inositol hexakisphosphate 4-kinase or 6-kinase activity","type":"exact"}],"termid":"GO:0033187"}


id: PBO:0087794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sumo-like domain protein; prevents accumulation of toxic intermediates during replication-associated recombinational repair; roles in silencing, lifespan, chromatid cohesion and the intra-S-phase DNA damage checkpoint; RENi family member","termid":"PBO:0087794"}


id: FYPO:0004614
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, is abnormal.","definition_xrefs":["GO:0046785","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal microtubule growth","type":"exact"},{"name":"abnormal microtubule polymerisation","type":"exact"},{"name":"abnormal microtubule polymerisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule rescue","type":"related"}],"termid":"FYPO:0004614"}


id: GO:0031127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha-(1->2) linkage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosyltransferase activity","termid":"GO:0008417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-(1,2)-fucosyltransferase activity","synonyms":[{"name":"alpha-(1->2)-fucosyltransferase activity","type":"exact"},{"name":"alpha-1,2-fucosyltransferase activity","type":"exact"}],"termid":"GO:0031127"}


id: PBO:0040184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase retroviral like 1","termid":"PBO:0040184"}


id: GO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lyase activity","synonyms":[{"name":"activation of lyase activity","type":"narrow"},{"name":"lyase activator","type":"exact"},{"name":"stimulation of lyase activity","type":"narrow"},{"name":"up regulation of lyase activity","type":"exact"},{"name":"up-regulation of lyase activity","type":"exact"},{"name":"upregulation of lyase activity","type":"exact"}],"termid":"GO:0051349"}


id: MOD:00984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dichloro-L-tyrosine","termid":"MOD:01045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3',5'-dichlorotyrosine","termid":"MOD:00984"}


id: PBO:0029330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation","termid":"PBO:0029330"}


id: PR:O94265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.17c gene.","definition_xrefs":["UniProtKB:O94265","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.17c","synonyms":[{"name":"HMP kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMP-P kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMP-phosphate kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HMPP kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBP8B7.17c","type":"exact"},{"name":"hydroxymethylpyrimidine kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hydroxymethylpyrimidine phosphate kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94265"}


id: GO:0070121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the Kupffer's vesicle over time from its initial formation until its mature state. The Kupffer's vesicle is a small but distinctive epithelial sac containing fluid, located midventrally posterior to the yolk cell or its extension, and transiently present during most of the segmentation period.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Kupffer's vesicle development","synonyms":[{"name":"KV development","type":"exact"}],"termid":"GO:0070121"}


id: PBO:0064574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PORCN divergent transcript","termid":"PBO:0064574"}


id: GO:0051557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leucoanthocyanidins, a class of colorless intermediates in the biosynthetic pathway of the pigmented flavonoids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"leucoanthocyanidin metabolic process","termid":"GO:0051556"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"leucoanthocyanidin biosynthetic process","termid":"GO:0051557"}


id: PBO:0058636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6768","termid":"PBO:0058636"}


id: PBO:0024838
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ATM1","termid":"PBO:0024838"}


id: GO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-ketocyclohexane-1-carboxyl-CoA + H2O = pimeloyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-ketocyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0018737)","termid":"GO:0018737"}


id: PBO:0056083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 75","termid":"PBO:0056083"}


id: PBO:0059379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 4","termid":"PBO:0059379"}


id: GO:0033876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + glycochenodeoxycholate = adenosine 3',5'-diphosphate + glycochenodeoxycholate 7-sulfate + H+.","definition_xrefs":["RHEA:17689","EC:2.8.2.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycochenodeoxycholate sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R07289","MetaCyc:2.8.2.34-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycochenodeoxycholate 7-sulfotransferase activity","type":"related"},{"name":"BAST","type":"related"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"broad"},{"name":"bile acid:PAPS:sulfotransferase activity","type":"related"}],"termid":"GO:0033876"}


id: FYPO:0004198
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation during mitosis","synonyms":[{"name":"decreased protein breakdown during mitosis","type":"exact"},{"name":"decreased protein catabolic process during mitosis","type":"exact"},{"name":"decreased protein catabolism during mitosis","type":"exact"},{"name":"decreased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein degradation during mitotic M phase","type":"related"},{"name":"decreased protein degradation during mitotic nuclear division","type":"exact"},{"name":"reduced protein degradation during mitosis","type":"exact"}],"termid":"FYPO:0004198"}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: SO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2B protein is methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK5_monomethylation_site","synonyms":[{"name":"H2BK5 mono-methylation site","type":"exact"}],"termid":"SO:0001714"}


id: PBO:0051128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-5","termid":"PBO:0051128"}


id: PR:Q09140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose:glycoprotein glucosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11226:SF0","OMA:SCHPO02557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.06","secondary_identifiers":["UniProtKB:Q09140"],"synonyms":[{"name":"Spom972h-UGGT1","type":"exact"},{"name":"UDP--Glc:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UGT (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09140"}


id: PBO:0057084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181c","termid":"PBO:0057084"}


id: GO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed at the periphery of the host cell nucleus by Baculoviruses.","definition_xrefs":["PMID:18434402","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peristromal region viral factory","synonyms":[{"name":"PR","type":"related"}],"termid":"GO:0039721"}


id: GO:1905641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetaldehyde stimulus.","definition_xrefs":["PMID:27687866","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to aldehyde","termid":"GO:0110096"},{"relation_name":"is_a","term_name":"response to acetaldehyde","termid":"GO:1905640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetaldehyde","termid":"GO:1905641"}


id: PBO:0073602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shroom family member 2 pseudogene 1","termid":"PBO:0073602"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: PBO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: GO:0007468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rhodopsin gene expression (obsolete GO:0007468)","synonyms":[{"name":"regulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0007468"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: PBO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 18","termid":"PBO:0070277"}


id: SO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of spliceosomal intron spliced by the U12 spliceosome, that includes U11, U12, U4atac/U6atac and U5 snRNAs.","definition_xrefs":["PMID:9428511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron","termid":"SO:0000662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_intron","synonyms":[{"name":"U12 intron","type":"exact"},{"name":"U12-dependent intron","type":"exact"}],"termid":"SO:0000295"}


id: PBO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 32","termid":"PBO:0052519"}


id: PBO:0076420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9 pseudogene 1","termid":"PBO:0076420"}


id: GO:0009070
data:
  {"annotated_genes":["SJAG_04305","SJAG_02972","SJAG_01880","SJAG_02450","SJAG_04449","SJAG_02313","SJAG_01766","SJAG_00881","SJAG_04964","SJAG_00283","SJAG_00582","SJAG_03914","SJAG_03152","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[92992,105536,91599,106582,97985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[90309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[90591,87406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[108043,102065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[106583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[88317,96361,106219,112976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00582":null,"SJAG_00881":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_02313":null,"SJAG_02450":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03914":null,"SJAG_04305":null,"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid anabolism","type":"exact"},{"name":"serine family amino acid biosynthesis","type":"exact"},{"name":"serine family amino acid formation","type":"exact"},{"name":"serine family amino acid synthesis","type":"exact"}],"termid":"GO:0009070","terms_by_termid":{"GO:0006535":null,"GO:0006545":null,"GO:0006564":null,"GO:0009090":null,"GO:0019264":null,"GO:0019344":null,"GO:0071269":null}}


id: SOFP:aminoacid
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"amino acid coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacid","termid":"SOFP:aminoacid"}


id: PBO:0045288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 39","termid":"PBO:0045288"}


id: GO:0010899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of phosphatidylcholine catabolism. Phosphatidylcholine catabolic processes are the chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"regulates","term_name":"phosphatidylcholine catabolic process","termid":"GO:0034638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylcholine catabolic process","termid":"GO:0010899"}


id: FYPO:0002524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of NADPH-hemoprotein reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal NADPH-hemoprotein reductase activity","termid":"FYPO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased NADPH-hemoprotein reductase activity","termid":"FYPO:0002524"}


id: GO:0018531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["RHEA:11880","EC:1.5.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-6-hydroxynicotine oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0478","MetaCyc:S-6-HYDROXYNICOTINE-OXIDASE-RXN","KEGG_REACTION:R03202"],"synonyms":[{"name":"(S)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-L-nicotine oxidase activity","type":"exact"},{"name":"6-hydroxy-L-nicotine:oxygen oxidoreductase activity","type":"related"},{"name":"L-6-hydroxynicotine oxidase activity","type":"exact"}],"termid":"GO:0018531"}


id: PATO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark green","termid":"PATO:0001249"}


id: PBO:0081178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 28","termid":"PBO:0081178"}


id: PBO:0057157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302c","termid":"PBO:0057157"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


