# terms

id: GO:0031110
data:
  {"annotated_genes":["SJAG_02045","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87495],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[97944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: PBO:0046626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 7","termid":"PBO:0046626"}


id: GO:0090297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA replication","termid":"GO:0090296"},{"relation_name":"is_a","term_name":"positive regulation of mitochondrial DNA metabolic process","termid":"GO:1901860"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication","termid":"GO:2000105"},{"relation_name":"positively_regulates","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitochondrial DNA replication","synonyms":[{"name":"positive regulation of mitochondrial DNA synthesis","type":"related"}],"termid":"GO:0090297"}


id: MOD:01910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one fluorine atom.","definition_xrefs":["Unimod:127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated residue","synonyms":[{"name":"F1Res","type":"exact"}],"termid":"MOD:01910"}


id: PBO:0028488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_index","termid":"PBO:0028488"}


id: SO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved cis-acting element that confers extreme-distance regulatory activity to an enhancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"range_extender_element","synonyms":[{"name":"REX","type":"exact"}],"termid":"SO:0002382"}


id: GO:0043974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 27 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 acetylation (obsolete GO:0043974)","synonyms":[{"name":"histone H3 acetylation at K27","type":"exact"},{"name":"histone H3K27 acetylation","type":"exact"}],"termid":"GO:0043974"}


id: PBO:0064781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1B","termid":"PBO:0064781"}


id: PBO:0029423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029423"}


id: PBO:0057008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 100","termid":"PBO:0057008"}


id: RO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a specifically dependent continuant (the dependent) and an independent continuant (the bearer), in which the dependent specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in_part_of","termid":"RO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in","termid":"RO:0000052"}


id: PBO:0072790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 1","termid":"PBO:0072790"}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PBO:0051139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-15","termid":"PBO:0051139"}


id: GO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminopentanamide + H2O = 5-aminopentanoate + NH3.","definition_xrefs":["EC:3.5.1.30","MetaCyc:5-AMINOPENTANAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"5-aminopentanamidase activity","secondary_identifiers":["RHEA:15677"],"synonyms":[{"name":"5-aminonorvaleramidase activity","type":"related"},{"name":"5-aminopentanamide amidohydrolase activity","type":"related"},{"name":"5-aminovaleramidase activity","type":"related"}],"termid":"GO:0047588"}


id: PBO:0051574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17C","termid":"PBO:0051574"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: PBO:0045458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DR1 associated protein 1","termid":"PBO:0045458"}


id: PBO:0028781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stable_shortened_telomeres","termid":"PBO:0028781"}


id: PBO:0013783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Spa2 (predicted)","termid":"PBO:0013783"}


id: GO:0015603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}


id: PBO:0031037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_kinetochore_organization","termid":"PBO:0031037"}


id: GO:0102584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-[2''-O-xylosyl) 6''-O-(p-coumaroyl) glucoside + UDP-alpha-D-glucose = cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz","PMID:15807784"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucosyltransferase activity (obsolete GO:0102584)","termid":"GO:0102584"}


id: PBO:0065716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pvt1 oncogene","termid":"PBO:0065716"}


id: PBO:0028000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spherical_vegetative_cell","termid":"PBO:0028000"}


id: GO:1900910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"positively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin metabolic process","synonyms":[{"name":"activation of olefin metabolic process","type":"narrow"},{"name":"activation of olefin metabolism","type":"narrow"},{"name":"positive regulation of olefin metabolism","type":"related"},{"name":"up regulation of olefin metabolic process","type":"exact"},{"name":"up regulation of olefin metabolism","type":"related"},{"name":"up-regulation of olefin metabolic process","type":"exact"},{"name":"up-regulation of olefin metabolism","type":"related"},{"name":"upregulation of olefin metabolic process","type":"exact"},{"name":"upregulation of olefin metabolism","type":"related"}],"termid":"GO:1900910"}


id: GO:0004812
data:
  {"annotated_genes":["SJAG_01197","SJAG_00443","SJAG_04094","SJAG_02615","SJAG_01159","SJAG_02517","SJAG_01522","SJAG_16456","SJAG_02263","SJAG_00488","SJAG_04285","SJAG_01352","SJAG_02015","SJAG_04856","SJAG_00420","SJAG_03585","SJAG_01235","SJAG_03071","SJAG_04473","SJAG_04482","SJAG_04738","SJAG_00103","SJAG_03277","SJAG_02236","SJAG_02977","SJAG_00243","SJAG_02428","SJAG_03545","SJAG_01259","SJAG_03626","SJAG_04409","SJAG_01797","SJAG_04762","SJAG_04840","SJAG_02206","SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68572],"is_not":false,"summary":null,"term":"GO:0004812"},{"annotations":[89824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004813"},{"annotations":[103297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004814"},{"annotations":[101150,98367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004816"},{"annotations":[110123,114093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004815"},{"annotations":[91679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004817"},{"annotations":[86445,97554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004818"},{"annotations":[105375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004819"},{"annotations":[93114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004820"},{"annotations":[104452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004821"},{"annotations":[108719,112117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004822"},{"annotations":[91154,94194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004823"},{"annotations":[101449,111738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004824"},{"annotations":[91351,101285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004825"},{"annotations":[89732,93318,114080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004826"},{"annotations":[103195,101997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004827"},{"annotations":[91539,90772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004828"},{"annotations":[103366,90581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004829"},{"annotations":[92007,93401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004830"},{"annotations":[113453,111105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004831"},{"annotations":[100752,93776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004832"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00243":null,"SJAG_00420":null,"SJAG_00443":null,"SJAG_00488":null,"SJAG_00653":null,"SJAG_01159":null,"SJAG_01197":null,"SJAG_01235":null,"SJAG_01259":null,"SJAG_01352":null,"SJAG_01522":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02206":null,"SJAG_02236":null,"SJAG_02263":null,"SJAG_02428":null,"SJAG_02517":null,"SJAG_02615":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03277":null,"SJAG_03545":null,"SJAG_03585":null,"SJAG_03626":null,"SJAG_04094":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04473":null,"SJAG_04482":null,"SJAG_04738":null,"SJAG_04762":null,"SJAG_04840":null,"SJAG_04856":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016874","GO:0140101"],"is_obsolete":false,"name":"aminoacyl-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.1.1.-","GO:0016876","GO:0017100"],"synonyms":[{"name":"aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"},{"name":"ligase activity, forming aminoacyl-tRNA and related compounds","type":"broad"}],"termid":"GO:0004812","terms_by_termid":{"GO:0004812":null,"GO:0004813":null,"GO:0004814":null,"GO:0004815":null,"GO:0004816":null,"GO:0004817":null,"GO:0004818":null,"GO:0004819":null,"GO:0004820":null,"GO:0004821":null,"GO:0004822":null,"GO:0004823":null,"GO:0004824":null,"GO:0004825":null,"GO:0004826":null,"GO:0004827":null,"GO:0004828":null,"GO:0004829":null,"GO:0004830":null,"GO:0004831":null,"GO:0004832":null}}


id: GO:0042216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene metabolic process","termid":"GO:0018955"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"phenanthrene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"phenanthrene breakdown","type":"exact"},{"name":"phenanthrene catabolism","type":"exact"},{"name":"phenanthrene degradation","type":"exact"}],"termid":"GO:0042216"}


id: PR:O43061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug136 gene.","definition_xrefs":["UniProtKB:O43061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 136 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.08","synonyms":[{"name":"Spom972h-mug136","type":"exact"}],"termid":"PR:O43061"}


id: PR:P10505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.01c","secondary_identifiers":["UniProtKB:P10505"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC27","type":"exact"},{"name":"nuclear alteration protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear scaffold-like protein p76 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P10505"}


id: PBO:0042977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 3","termid":"PBO:0042977"}


id: GO:0060542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand invasion","termid":"GO:0042148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of strand invasion","termid":"GO:0060542"}


id: PBO:0072807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 4A","termid":"PBO:0072807"}


id: GO:0072751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-thialysine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to L-thialysine","termid":"GO:1901345"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-thialysine","synonyms":[{"name":"cellular response to thialysine","type":"broad"}],"termid":"GO:0072751"}


id: GO:0032473
data:
  {"annotated_genes":["SJAG_05268","SJAG_04732","SJAG_03345","SJAG_01134","SJAG_03464","SJAG_00605","SJAG_00368","SJAG_00948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85376,95352,96618,98601,100552,100894,102659,111828],"is_not":false,"summary":null,"term":"GO:0032473"}]},"cv_name":"cellular_component","definition":"The external (cytoplasmic) face of the mitochondrial outer membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"mitochondrial outer membrane","termid":"GO:0005741"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00605":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_04732":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of mitochondrial outer membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytosolic side of mitochondrial outer membrane","type":"exact"},{"name":"external leaflet of mitochondrial outer membrane","type":"exact"},{"name":"external side of mitochondrial envelope","type":"related"},{"name":"external side of mitochondrial outer membrane","type":"exact"}],"termid":"GO:0032473","terms_by_termid":{"GO:0032473":null}}


id: PBO:0053181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lens epithelial protein","termid":"PBO:0053181"}


id: PBO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Dma1","termid":"PBO:0001513"}


id: PBO:0035758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035758"}


id: PBO:0067609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 778, pseudogene","termid":"PBO:0067609"}


id: GO:0035571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The monomethylation of the N-terminal serine of proteins to form the derivative N-methylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine monomethylation","termid":"GO:0035571"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:mlr","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: PBO:0087605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; involved in histone acylation; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT) and by human COASY","termid":"PBO:0087605"}


id: PBO:0058217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4509-1","termid":"PBO:0058217"}


id: PATO:0001921
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the front of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised anteriorly","termid":"PATO:0001921"}


id: GO:0072460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether recombination is complete is received and converted into a molecular signal, contributing to a meiotic recombination checkpoint.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic recombination checkpoint (obsolete GO:0072460)","synonyms":[{"name":"meiotic recombination checkpoint sensor mechanism","type":"related"},{"name":"meiotic recombination checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic recombination checkpoint","type":"related"}],"termid":"GO:0072460"}


id: PBO:0088934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermembrane lipid transfer protein, chorein family Vps13a","termid":"PBO:0088934"}


id: PR:O60065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23058:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.03c","secondary_identifiers":["UniProtKB:O60065"],"synonyms":[{"name":"SPBC13G1.03c","type":"related"},{"name":"Spom972h-PEX14","type":"exact"},{"name":"peroxin-14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60065"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: SO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial rRNA is an RNA component of the small or large subunits of mitochondrial ribosomes.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA","synonyms":[{"name":"Mt rRNA","type":"exact"},{"name":"Mt_rRNA","type":"exact"},{"name":"mitochondrial rRNA","type":"exact"},{"name":"mitochondrial_rRNA","type":"exact"}],"termid":"SO:0002128"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: PBO:0058183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4477a","termid":"PBO:0058183"}


id: PBO:0069471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 738, pseudogene","termid":"PBO:0069471"}


id: PBO:0028158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_5S_RNA_maturation","termid":"PBO:0028158"}


id: PBO:0067466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 594, pseudogene","termid":"PBO:0067466"}


id: PBO:0059383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 8","termid":"PBO:0059383"}


id: PBO:0087005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); stimulates the intrinsic GTPase activity of Rho1p, which plays a bud growth by regulating actin cytoskeleton organization and cell wall biosynthesis, resulting in the downregulation of Rho1p; structurally and functionally related to Sac7p; BAG7 has a paralog, SAC7, that arose from the whole genome duplication","termid":"PBO:0087005"}


id: GO:0090117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of low-density lipoprotein particle from endosomes to lysosomes.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"endosome to lysosome transport of low-density lipoprotein particle","synonyms":[{"name":"endosome to lysosome transport of LDL","type":"exact"}],"termid":"GO:0090117"}


id: PR:O94452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.10","synonyms":[{"name":"Spom972h-mcp1","type":"exact"}],"termid":"PR:O94452"}


id: SO:0000357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region that is bounded either side by a particular kind of region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flanked","termid":"SO:0000357"}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: GO:0062202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peregrinol diphosphate = diphosphate + labd-13(16),14-diene-9-ol.","definition_xrefs":["RHEA:62184","PMID:29315936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"Labd-13(16),14-diene-9-ol synthase activity","termid":"GO:0062202"}


id: GO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ecdysone stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ecdysone","termid":"GO:0035075"}


id: PR:O13663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23071:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.06","secondary_identifiers":["UniProtKB:O13663"],"synonyms":[{"name":"Spom972h-PIGO","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi072","type":"related"}],"termid":"PR:O13663"}


id: PBO:0034330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derives_into","termid":"PBO:0034330"}


id: PBO:0049725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 3","termid":"PBO:0049725"}


id: GO:1904457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal action potential.","definition_xrefs":["PMID:25126967","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of action potential","termid":"GO:0045760"},{"relation_name":"is_a","term_name":"positive regulation of transmission of nerve impulse","termid":"GO:0051971"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"positively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuronal action potential","synonyms":[{"name":"activation of generation of action potential","type":"related"},{"name":"activation of neuronal action potential","type":"narrow"},{"name":"positive regulation of generation of action potential","type":"related"},{"name":"up regulation of generation of action potential","type":"related"},{"name":"up regulation of neuronal action potential","type":"exact"},{"name":"up-regulation of generation of action potential","type":"related"},{"name":"up-regulation of neuronal action potential","type":"exact"},{"name":"upregulation of generation of action potential","type":"related"},{"name":"upregulation of neuronal action potential","type":"exact"}],"termid":"GO:1904457"}


id: PBO:0113521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Unconventional prefoldin protein involved in translation initiation; required for correct assembly of RNAP I, II, and III in an Rpb5p-dependent manner; shuttles between nucleus and cytoplasm; mutants have inappropriate expression of nutrient sensitive genes due to translational derepression of Gcn4p transcription factor; diploid mutants show random budding; mutations affect TOR signaling; ortholog of human URI/RMP","termid":"PBO:0113521"}


id: FYPO:0006027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more actin cables than normal.","definition_xrefs":["PMID:11694585","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actin cables present in increased numbers","synonyms":[{"name":"actin cables present in increased numbers during mitotic cell cycle","type":"related"},{"name":"actin cables present in increased numbers during vegetative growth","type":"exact"},{"name":"extra actin cables present","type":"exact"},{"name":"formin-nucleated actin cables present in increased numbers","type":"exact"},{"name":"increased level of actin cables","type":"related"}],"termid":"FYPO:0006027"}


id: PBO:0028721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint","termid":"PBO:0028721"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: PBO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TeTra Spanning protein","termid":"PBO:0004927"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: PBO:0056712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 4","termid":"PBO:0056712"}


id: PBO:0079562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 1","termid":"PBO:0079562"}


id: FYPO:0007436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, is elongated, and contains more than one septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000631","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"swollen elongated multiseptate vegetative cell","synonyms":[{"name":"elongated swollen multiseptate vegetative cell","type":"exact"},{"name":"swollen elongated multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"swollen elongated multiseptate vegetative cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007436"}


id: PBO:0058240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4527 host gene","termid":"PBO:0058240"}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_04700","SJAG_01797","SJAG_04756","SJAG_00886","SJAG_03932","SJAG_00169","SJAG_03626","SJAG_02661","SJAG_03584","SJAG_01877","SJAG_01248","SJAG_02288","SJAG_03461","SJAG_00466","SJAG_01074","SJAG_04409","SJAG_01314","SJAG_04680","SJAG_04856","SJAG_04181","SJAG_03545","SJAG_03788","SJAG_04175","SJAG_04285","SJAG_01704","SJAG_02637","SJAG_02615","SJAG_03629","SJAG_01302","SJAG_02352","SJAG_04582","SJAG_02263","SJAG_02042","SJAG_02099","SJAG_03071","SJAG_00579","SJAG_00358","SJAG_00325","SJAG_02977","SJAG_04762","SJAG_00195","SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83882,84718,86576,88711,89827,90037,90373,90586,90773,90817,91540,91572,92190,93319,94589,94590,95505,96549,97555,98369,98987,100236,101636,101859,101934,103355,104493,105569,105758,106696,108228,108720,108948,109608,110481,111739,112118,113972,114081,114662,115024],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[101497,93339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03788":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000946"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: GO:1902821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-undecene.","definition_xrefs":["GO_REF:0000068","PMID:16013377","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"1-undecene metabolic process","termid":"GO:1902820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene biosynthetic process","synonyms":[{"name":"1-undecene anabolism","type":"exact"},{"name":"1-undecene biosynthesis","type":"exact"},{"name":"1-undecene formation","type":"exact"},{"name":"1-undecene synthesis","type":"exact"}],"termid":"GO:1902821"}


id: PBO:0051235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-40-1 (pseudogene)","termid":"PBO:0051235"}


id: GO:0055053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: mannose + H+ = mannose + H+.","definition_xrefs":["GOC:ct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"mannose:proton symporter activity","synonyms":[{"name":"mannose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055053"}


id: PBO:0030894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleus_localization_during_vegetative_growth","termid":"PBO:0030894"}


id: PBO:0063829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphohistidine phosphatase 1","termid":"PBO:0063829"}


id: PBO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 1","termid":"PBO:0039004"}


id: GO:0019361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA, a derivative of coenzyme A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA metabolic process","termid":"GO:0046432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process","secondary_identifiers":["MetaCyc:P2-PWY"],"synonyms":[{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA anabolism","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthesis","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA formation","type":"exact"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA synthesis","type":"exact"}],"termid":"GO:0019361"}


id: GO:1902406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the mitotic contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring maturation","termid":"GO:0031566"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0000281","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring maturation","synonyms":[{"name":"mitotic cytokinesis contractile ring maintenance","type":"related"}],"termid":"GO:1902406"}


id: GO:1905628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:TermGenie","GOC:PARL","PMID:25642596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of serotonin biosynthetic process","termid":"GO:1905627"},{"relation_name":"negatively_regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serotonin biosynthetic process","synonyms":[{"name":"down regulation of serotonin anabolism","type":"exact"},{"name":"down regulation of serotonin biosynthesis","type":"exact"},{"name":"down regulation of serotonin biosynthetic process","type":"exact"},{"name":"down regulation of serotonin formation","type":"exact"},{"name":"down regulation of serotonin synthesis","type":"exact"},{"name":"down-regulation of serotonin anabolism","type":"exact"},{"name":"down-regulation of serotonin biosynthesis","type":"exact"},{"name":"down-regulation of serotonin biosynthetic process","type":"exact"},{"name":"down-regulation of serotonin formation","type":"exact"},{"name":"down-regulation of serotonin synthesis","type":"exact"},{"name":"downregulation of serotonin anabolism","type":"exact"},{"name":"downregulation of serotonin biosynthesis","type":"exact"},{"name":"downregulation of serotonin biosynthetic process","type":"exact"},{"name":"downregulation of serotonin formation","type":"exact"},{"name":"downregulation of serotonin synthesis","type":"exact"},{"name":"inhibition of serotonin anabolism","type":"narrow"},{"name":"inhibition of serotonin biosynthesis","type":"narrow"},{"name":"inhibition of serotonin biosynthetic process","type":"narrow"},{"name":"inhibition of serotonin formation","type":"narrow"},{"name":"inhibition of serotonin synthesis","type":"narrow"},{"name":"negative regulation of serotonin anabolism","type":"exact"},{"name":"negative regulation of serotonin biosynthesis","type":"exact"},{"name":"negative regulation of serotonin formation","type":"exact"},{"name":"negative regulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905628"}


id: GO:0050786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RAGE receptor, the receptor for advanced glycation end-products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RAGE receptor binding","synonyms":[{"name":"advanced glycation end-product receptor binding","type":"exact"}],"termid":"GO:0050786"}


id: PBO:0030109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_methionine_import","termid":"PBO:0030109"}


id: GO:0140650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of a pyramidal neuron along radial glial cells.","definition_xrefs":["PMID:3760547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia-guided pyramidal neuron migration","synonyms":[{"name":"radial glia-dependent neuronal migration","type":"exact"}],"termid":"GO:0140650"}


id: GO:1905600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:22848640","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905600"}


id: MOD:00583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a thiophosphono group (H2PO2S, 'thiophosphate').","definition_xrefs":["PubMed:12110917","Unimod:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphorylated residue","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:00583"}


id: PBO:0065092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 1","termid":"PBO:0065092"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: GO:0110057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","GOC:BHF","PMID:23072816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"}


id: PBO:0084492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein essential for chromosome synapsis; involved in completion of nuclear divisions during meiosis; induced early in meiosis","termid":"PBO:0084492"}


id: GO:0009673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"low affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0009673"}


id: GO:0016714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced pteridine and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.16.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}


id: GO:0015535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fucose(out) + H+(out) = fucose(in) + H+(in).","definition_xrefs":["TC:2.A.1.7.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"fucose transmembrane transporter activity","termid":"GO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fucose:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-20","RHEA:29023"],"synonyms":[{"name":"fucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015535"}


id: GO:0035079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decondensing (loosening) and swelling of the chromosomal sites of target genes on polytene chromosomes following response to a stimulus, to facilitate sudden bursts of transcriptional activity in response to transient environmental signals.","definition_xrefs":["GOC:bf","PMID:12543962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polytene chromosome puffing","termid":"GO:0035079"}


id: RO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two material entities in a system of connected structures, where the branching relationship holds based on properties of the connecting network.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_branching_relationship_with","termid":"RO:0002375"}


id: GO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Dimethylation of the N6 amino groups of two consecutive adenosine residues near the 3'-end of the SSU rRNA. This process has been conserved from bacteria to eukaryotes.","definition_xrefs":["GOC:curators","GOC:dph","GOC:tb","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylation involved in SSU-rRNA maturation (obsolete GO:0000456)","termid":"GO:0000456"}


id: GO:0046185
data:
  {"annotated_genes":["SJAG_04726","SJAG_01432","SJAG_05256","SJAG_04674","SJAG_02960","SJAG_00281","SJAG_02988","SJAG_02106","SJAG_01596","SJAG_01457","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91641,99577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"},{"annotations":[97126,101164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[84115,96421,98891,108887,88543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[58852,60528,101121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldehydes, any organic compound with the formula R-CH=O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aldehyde catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde breakdown","type":"exact"},{"name":"aldehyde catabolism","type":"exact"},{"name":"aldehyde degradation","type":"exact"}],"termid":"GO:0046185","terms_by_termid":{"GO:0009436":null,"GO:0019243":null,"GO:0046294":null,"GO:0061727":null}}


id: FYPO:0001624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal vacuolar asparagine level","synonyms":[{"name":"normal level of asparagine in vacuole","type":"exact"},{"name":"normal vacuolar L-asparagine level","type":"exact"},{"name":"normal vacuolar asparagine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001624"}


id: PBO:0054031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1362","termid":"PBO:0054031"}


id: PBO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (predicted)","termid":"PBO:0005186"}


id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: GO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"ketogluconate metabolic process","secondary_identifiers":["MetaCyc:KETOGLUCONMET-PWY"],"synonyms":[{"name":"ketogluconate metabolism","type":"exact"}],"termid":"GO:0019522"}


id: MOD:01800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-serine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"},{"relation_name":"is_a","term_name":"methylated serine","termid":"MOD:01799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated serine","termid":"MOD:01800"}


id: PBO:0028219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_during_cellular_response_to_salt_stress","termid":"PBO:0028219"}


id: MOD:01071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a diphenylmethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphenylmethyl modified residue","synonyms":[{"name":"Dpm","type":"exact"}],"termid":"MOD:01071"}


id: GO:0009405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogenesis (obsolete GO:0009405)","synonyms":[{"name":"virulence","type":"related"}],"termid":"GO:0009405"}


id: GO:0060787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of the formation of the posterior neural plate, the posterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"positively_regulates","term_name":"posterior neural plate formation","termid":"GO:0090018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of posterior neural plate formation by FGF receptor signaling pathway","type":"related"},{"name":"positive regulation of posterior neural plate formation by fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060787"}


id: GO:1902249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to IMP, inosine monophosphate.","definition_xrefs":["PMID:4314233","GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IMP binding","termid":"GO:1902249"}


id: GO:0070625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of intracellular molecules contained within the zymogen granule by fusion of the granule with the plasma membrane of the oocyte, requiring calcium ions.","definition_xrefs":["PMID:17442889","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"zymogen granule exocytosis","termid":"GO:0070625"}


id: FYPO:0007317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased cytoplasmic translation","synonyms":[{"name":"decreased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translation","type":"exact"}],"termid":"FYPO:0007317"}


id: PR:Q9P7V6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 33A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.15c","secondary_identifiers":["UniProtKB:Q9P7V6"],"synonyms":[{"name":"Spom972h-VPS33A","type":"exact"}],"termid":"PR:Q9P7V6"}


id: PBO:0082849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper chaperone for superoxide dismutase Sod1p; involved in oxidative stress protection; Met-X-Cys-X2-Cys motif within N-terminus is involved in insertion of copper into Sod1p under conditions of copper deprivation; required for regulation of yeast copper genes in response to DNA-damaging agents; protein abundance increases in response to DNA replication stress; human homolog CCS can complement yeast ccs1 null mutant","termid":"PBO:0082849"}


id: FYPO:0000592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished transposition","synonyms":[{"name":"abolished transposition during mitotic cell cycle","type":"related"},{"name":"absent transposable element transposition","type":"exact"},{"name":"transposable element transposition abolished","type":"exact"},{"name":"transposable element transposition: absent","type":"related"},{"name":"transposition abolished","type":"exact"},{"name":"transposition abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000592"}


id: PBO:0077256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 7","termid":"PBO:0077256"}


id: PBO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0003742"}


id: PBO:0043651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 1","termid":"PBO:0043651"}


id: PBO:0111746
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)","termid":"PBO:0111746"}


id: PBO:0031439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_vegetative_growth","termid":"PBO:0031439"}


id: PBO:0034513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site","termid":"PBO:0034513"}


id: PBO:0087986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; catalyzes the conversion of uridine to pseudouridine at position 31 in cytoplasmic and mitochondrial tRNAs; mutation of Asp168 to Ala abolishes enzyme activity; not essential for viability","termid":"PBO:0087986"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: PBO:0053799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1054","termid":"PBO:0053799"}


id: PBO:0058051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4272","termid":"PBO:0058051"}


id: GO:0070635
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86773],"is_not":false,"summary":null,"term":"GO:0070635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide riboside + H2O = nicotinamide + D-ribose.","definition_xrefs":["PMID:19001417","MetaCyc:RXN-8441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"nicotinamide riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide hydrolase activity","type":"exact"},{"name":"nicotinamide ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070635","terms_by_termid":{"GO:0070635":null}}


id: GO:0050665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide biosynthetic process","synonyms":[{"name":"H2O2 biosynthetic process","type":"exact"},{"name":"hydrogen peroxide anabolism","type":"exact"},{"name":"hydrogen peroxide biosynthesis","type":"exact"},{"name":"hydrogen peroxide formation","type":"exact"},{"name":"hydrogen peroxide generation","type":"exact"},{"name":"hydrogen peroxide synthesis","type":"exact"}],"termid":"GO:0050665"}


id: GO:0070716
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94223],"is_not":false,"summary":null,"term":"GO:0070716"},{"annotations":[94225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A mismatch repair process that corrects errors introduced that ensures the accuracy of DNA replication.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair","termid":"GO:0006298"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mismatch repair involved in maintenance of fidelity during DNA-dependent DNA replication","type":"related"}],"termid":"GO:0070716","terms_by_termid":{"GO:0070716":null,"GO:1990516":null}}


id: GO:0042476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontogenesis","secondary_identifiers":["Wikipedia:Odontogenesis","GO:0042477"],"synonyms":[{"name":"odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"odontogeny","type":"exact"},{"name":"odontosis","type":"exact"},{"name":"tooth development","type":"related"},{"name":"tooth morphogenesis","type":"exact"}],"termid":"GO:0042476"}


id: SO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which is partially duplicated due to duplication of DNA, leading to a new transcript that is only partial and likely nonfunctional.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_duplicated_transcript","synonyms":[{"name":"partially duplicated transcript","type":"exact"}],"termid":"SO:0002244"}


id: PBO:0067377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 479, pseudogene","termid":"PBO:0067377"}


id: PBO:0062908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 1","termid":"PBO:0062908"}


id: GO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9) by promoting the nuclear accumulation of IRF9. For example, the reovirus mu2 protein promotes nuclear accumulation of host IRF9 by an as yet unconfirmed-mechanism.","definition_xrefs":["PMID:19109390"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus (obsolete GO:0039561)","synonyms":[{"name":"suppression by virus of host IRF9 activity by nuclear localization of IRF9","type":"related"},{"name":"suppression of interferon signaling by nuclear accumulation of IRF9","type":"related"}],"termid":"GO:0039561"}


id: GO:0035446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol + L-cysteine + ATP = 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside + AMP + diphosphate + 2 H+. 1-(2-amino-2-deoxy-alpha-D-glucopyranoside)-1D-myo-inositol is also known as glucosaminyl-inositol or GlcN-Ins, and 1-D-myo-inosityl-2-L-cysteinylamido-2-deoxy-alpha-D-glucopyranoside as desacetylmycothiol or Cys-GlcN-Ins.","definition_xrefs":["MetaCyc:RXN1G-4","PMID:12033919","EC:6.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cysteine-glucosaminylinositol ligase activity","secondary_identifiers":["MetaCyc:RXN1G-121","RHEA:26176"],"synonyms":[{"name":"L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase","type":"related"},{"name":"MshC ligase","type":"related"},{"name":"desacetylmycothiol synthase","type":"related"}],"termid":"GO:0035446"}


id: PATO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001142 ig d concentration value (obsolete PATO:0001142)","termid":"PATO:0001142"}


id: PBO:0082104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA-peroxin; heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; mutations in human PEX6 can lead to severe peroxisomal disorders and early death","termid":"PBO:0082104"}


id: FYPO:0002685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level","synonyms":[{"name":"increased trehalose accumulation","type":"related"}],"termid":"FYPO:0002685"}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: PR:O13803
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 82 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00825","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17H9.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.06c","secondary_identifiers":["UniProtKB:O13803"],"synonyms":[{"name":"Spom972h-CCDC82","type":"exact"}],"termid":"PR:O13803"}


id: GO:0018634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-pinene + NADH + H+ + O2 = NAD+ + H2O + alpha-pinene oxide.","definition_xrefs":["RHEA:32891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alpha-pinene monooxygenase (NADH) activity","secondary_identifiers":["UM-BBD_reactionID:r0742","EC:1.14.13.155"],"synonyms":[{"name":"alpha-pinene monooxygenase [NADH] activity","type":"exact"}],"termid":"GO:0018634"}


id: PR:Q09773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 62 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.04","synonyms":[{"name":"Spom972h-mug62","type":"exact"}],"termid":"PR:Q09773"}


id: PBO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H","termid":"PBO:0046057"}


id: PBO:0030380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cadmium","termid":"PBO:0030380"}


id: GO:0098998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic early endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic endosome membrane","termid":"GO:0098999"},{"relation_name":"part_of","term_name":"postsynaptic early endosome membrane","termid":"GO:0098896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"extrinsic component of postsynaptic early endosome membrane","termid":"GO:0098998"}


id: GO:1903641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastric acid secretion","termid":"GO:0060454"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"positively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"activation of gastrin-induced gastric acid secretion","type":"narrow"},{"name":"up regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"up-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"upregulation of gastrin-induced gastric acid secretion","type":"exact"}],"termid":"GO:1903641"}


id: PR:O59836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfp1 gene.","definition_xrefs":["UniProtKB:O59836","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsk1-interacting molecule 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.13","synonyms":[{"name":"DNA repair protein rad35 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dfp1","type":"exact"}],"termid":"PR:O59836"}


id: GO:0004100
data:
  {"annotated_genes":["SJAG_04868","SJAG_00442"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84845,100745],"is_not":false,"summary":null,"term":"GO:0004100"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n) = UDP + [->4)-N-acetyl-beta-D-glucosaminyl-(1-](n+1).","definition_xrefs":["EC:2.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"chitin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16637","MetaCyc:CHITIN-SYNTHASE-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyl-transferase activity","type":"related"},{"name":"chitin synthetase activity","type":"related"},{"name":"chitin-UDP N-acetylglucosaminyltransferase activity","type":"related"},{"name":"chitin-UDP acetyl-glucosaminyl transferase activity","type":"related"},{"name":"chitin-uridine diphosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"trans-N-acetylglucosaminosylase activity","type":"related"}],"termid":"GO:0004100","terms_by_termid":{"GO:0004100":null}}


id: PR:O59748
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsc1 gene.","definition_xrefs":["UniProtKB:O59748","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.13","synonyms":[{"name":"CTD kinase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsc1","type":"exact"},{"name":"latrunculin sensitive cyclin knockout protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59748"}


id: GO:0036505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prosaposin to initiate a change in cell activity. Prosaposin is the glycoprotein precursor of four cleavage products (saposins A, B, C and D).","definition_xrefs":["PMID:23690594","GOC:bf","GOC:PARL","PMID:9388493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prosaposin receptor activity","synonyms":[{"name":"prosaposin-activated receptor activity","type":"exact"}],"termid":"GO:0036505"}


id: PBO:0078701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 3-1","termid":"PBO:0078701"}


id: PBO:0034276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_succeeded_by","termid":"PBO:0034276"}


id: PBO:0053400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 330","termid":"PBO:0053400"}


id: RO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"has substance removed\\\" is a relation existing between two physical entities in which the first entity has had the second entity (a substance) removed from it at some point in time.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_substance_removed","termid":"RO:0009002"}


id: GO:0046844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the micropyle, a single cone-shaped specialization of the chorion that allows sperm entry into the egg prior to fertilization.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"chorion micropyle formation","termid":"GO:0046844"}


id: PBO:0087695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing","termid":"PBO:0087695"}


id: PR:O13820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.04","synonyms":[{"name":"C-22 sterol desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg5","type":"exact"}],"termid":"PR:O13820"}


id: PBO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator","termid":"PBO:0000018"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: PBO:0003123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mythylglyoxyl reductase (NADPH-dependent) (predicted)","termid":"PBO:0003123"}


id: GO:0060357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of leucine import. Leucine import is the directed movement of leucine into a cell or organelle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of L-leucine import (obsolete GO:0060357)","synonyms":[{"name":"regulation of L-leucine import","type":"narrow"},{"name":"regulation of L-leucine uptake","type":"narrow"},{"name":"regulation of leucine import","type":"broad"},{"name":"regulation of leucine uptake","type":"exact"}],"termid":"GO:0060357"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: GO:0047882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + estradiol-17beta + O2 = 6beta-hydroxyestradiol-17beta + A + H2O.","definition_xrefs":["RHEA:19137","EC:1.14.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"estradiol 6-beta-monooxygenase activity","secondary_identifiers":["MetaCyc:ESTRADIOL-6-BETA-MONOOXYGENASE-RXN","KEGG_REACTION:R03086"],"synonyms":[{"name":"estradiol 6-beta-hydroxylase activity","type":"related"},{"name":"estradiol 6b-hydroxylase activity","type":"exact"},{"name":"estradiol 6b-monooxygenase activity","type":"exact"},{"name":"estradiol 6beta-hydroxylase activity","type":"related"},{"name":"estradiol 6beta-monooxygenase activity","type":"related"},{"name":"estradiol-17beta,hydrogen-donor:oxygen oxidoreductase (6beta-hydroxylating)","type":"related"}],"termid":"GO:0047882"}


id: PBO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_protein_location_at_cell_tip","termid":"PBO:0034512"}


id: PBO:0109140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3110","termid":"PBO:0109140"}


id: GO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex.","definition_xrefs":["Wikipedia:TGF_beta_signaling_pathway","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0023052","GO:0044085"],"is_obsolete":false,"name":"transforming growth factor beta receptor complex assembly","synonyms":[{"name":"TGF-beta receptor complex assembly","type":"exact"},{"name":"TGF-beta:type II receptor:type I receptor complex assembly","type":"exact"},{"name":"TGFbeta receptor complex assembly","type":"exact"}],"termid":"GO:0007181"}


id: GO:1903721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["GO_REF:0000058","PMID:23675531","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"positively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of I-kappaB phosphorylation","synonyms":[{"name":"activation of I-kappaB phosphorylation","type":"narrow"},{"name":"activation of IKB phosphorylation","type":"narrow"},{"name":"activation of IkappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"activation of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"positive regulation of IKB phosphorylation","type":"exact"},{"name":"positive regulation of IkappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"positive regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up regulation of IKB phosphorylation","type":"exact"},{"name":"up regulation of IkappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"up-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of IKB phosphorylation","type":"exact"},{"name":"up-regulation of IkappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"up-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"upregulation of I-kappaB phosphorylation","type":"exact"},{"name":"upregulation of IKB phosphorylation","type":"exact"},{"name":"upregulation of IkappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"upregulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903721"}


id: PBO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intracellular_endoparasite","termid":"PBO:0034313"}


id: PBO:0071126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 128","termid":"PBO:0071126"}


id: PBO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein X-linked, pseudogene","termid":"PBO:0045773"}


id: SO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an mRNA sequence that has been reprogrammed at translation, causing localized alterations.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded","termid":"SO:0000881"}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: GO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R3/R4 photoreceptors commit to their cell fate. R3 and R4 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell fate commitment","termid":"GO:0007464"}


id: GO:1900800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cspyrone B1.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cspyrone B1 metabolic process","synonyms":[{"name":"cspyrone B1 metabolism","type":"exact"}],"termid":"GO:1900800"}


id: GO:1901006
data:
  {"annotated_genes":["SJAG_01820"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111927],"is_not":false,"summary":null,"term":"GO:1901006"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone-6.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"},{"relation_name":"is_a","term_name":"ubiquinone-6 metabolic process","termid":"GO:1901004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006744","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone-6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquinone-6 anabolism","type":"exact"},{"name":"ubiquinone-6 biosynthesis","type":"exact"},{"name":"ubiquinone-6 formation","type":"exact"},{"name":"ubiquinone-6 synthesis","type":"exact"}],"termid":"GO:1901006","terms_by_termid":{"GO:1901006":null}}


id: PBO:0050657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 7, pseudogene","termid":"PBO:0050657"}


id: PBO:0060885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolus and neural progenitor protein","termid":"PBO:0060885"}


id: PBO:0085509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; RPS11B has a paralog, RPS11A, that arose from the whole genome duplication","termid":"PBO:0085509"}


id: PR:O13785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle transport protein USE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13050:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein use1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.07c","secondary_identifiers":["UniProtKB:O13785"],"synonyms":[{"name":"SPAC17G6.07c","type":"related"},{"name":"Spom972h-USE1","type":"exact"}],"termid":"PR:O13785"}


id: PBO:0063828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOX2B antisense RNA 1","termid":"PBO:0063828"}


id: PBO:0041977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 18","termid":"PBO:0041977"}


id: PR:000044730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"The C-terminal portion of telomere maintenance protein SDE2 (Schizosaccharomyces pombe) that remains following proteolytic cleavage after the second glycine within the GGKGG motif. This portion contains a predicted helical domain.","definition_xrefs":["PMID:28947618","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sde2-C","pombase_gene_id":"SPAC31G5.18c","synonyms":[{"name":"PomBase_original_PRO_term_name: Sde2-C (Schizosaccharomyces pombe)","type":"exact"},{"name":"Sde2-C","type":"exact"},{"name":"Spom-sde2/Sde2-C","type":"exact"}],"termid":"PR:000044730"}


id: GO:0019667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of L-alanine, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"},{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006091","GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"anaerobic L-alanine catabolic process","synonyms":[{"name":"L-alanine fermentation","type":"exact"}],"termid":"GO:0019667"}


id: PBO:0056128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal trafficking regulator","termid":"PBO:0056128"}


id: PBO:0079718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 5","termid":"PBO:0079718"}


id: SO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls upstream of a transcript, but within the genic region of the gene due to alternately transcribed isoforms.","definition_xrefs":["NCBI:dm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genic_upstream_transcript_variant","synonyms":[{"name":"genic 5 prime transcript variant","type":"exact"},{"name":"genic 5' transcript variant","type":"exact"},{"name":"genic upstream transcript variant","type":"exact"}],"termid":"SO:0002153"}


id: PBO:0070730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a","termid":"PBO:0070730"}


id: PBO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate pathway absent from pombe","termid":"PBO:0032748"}


id: GO:2000772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular senescence","termid":"GO:2000772"}


id: PBO:0082773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SPS plasma membrane amino acid sensor system; senses external amino acid concentration and transmits intracellular signals that result in regulation of expression of amino acid permease genes; other members are Ssy1p, Ptr3p, and Ssy5p","termid":"PBO:0082773"}


id: GO:0097225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.","definition_xrefs":["GOC:cjm","MP:0009831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm midpiece","termid":"GO:0097225"}


id: PBO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 24","termid":"PBO:0043156"}


id: GO:0009349
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106451],"is_not":false,"summary":null,"term":"GO:0009349"}]},"cv_name":"cellular_component","definition":"An flavoprotein that catalyzes the reaction the breakdown of dimethyl(ribityl)lumazine to form riboflavin and ribitylamino-amino-dihydroxypyrimidine.","definition_xrefs":["PMID:18298940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"riboflavin synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009349","terms_by_termid":{"GO:0009349":null}}


id: PBO:0082240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of chaperonin-containing T-complex; complex mediates protein folding in the cytosol; involved in actin cytoskeleton maintenance; overexpression in neurons suppresses formation of pathogenic conformations of huntingtin protein","termid":"PBO:0082240"}


id: PBO:0072485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 14","termid":"PBO:0072485"}


id: GO:0035717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 7.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 7 binding","synonyms":[{"name":"CCL7 binding","type":"exact"}],"termid":"GO:0035717"}


id: PBO:0062677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily J member 1","termid":"PBO:0062677"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: GO:0050777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"negatively_regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune response","synonyms":[{"name":"down regulation of immune response","type":"exact"},{"name":"down-regulation of immune response","type":"exact"},{"name":"downregulation of immune response","type":"exact"},{"name":"inhibition of immune response","type":"narrow"}],"termid":"GO:0050777"}


id: GO:2000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"positively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte migration","synonyms":[{"name":"positive regulation of immature T cell migration","type":"related"},{"name":"positive regulation of immature T lymphocyte migration","type":"related"},{"name":"positive regulation of immature T-cell migration","type":"related"},{"name":"positive regulation of immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000412"}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: PBO:0043298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 17A","termid":"PBO:0043298"}


id: PBO:0078488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-2","termid":"PBO:0078488"}


id: PBO:0083441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified and essential ORF SPT6/YGR115C","termid":"PBO:0083441"}


id: PBO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Vps24","termid":"PBO:0002532"}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosylmethioninamine = N1-aminopropylagmatine + 5'-methylthioadenosine.","definition_xrefs":["PMID:15983049","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","secondary_identifiers":["EC:2.5.1.104"],"synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: GO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerophosphate(n) + CDP-glycerol = glycerophosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"CDP-glycerol glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN4-RXN","RHEA:13565"],"synonyms":[{"name":"CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase activity","type":"related"},{"name":"CDPglycerol glycerophosphotransferase activity","type":"related"},{"name":"CGPTase activity","type":"related"},{"name":"cytidine diphosphoglycerol glycerophosphotransferase activity","type":"related"},{"name":"glycerophosphate synthetase activity","type":"related"},{"name":"poly(glycerol phosphate) polymerase activity","type":"related"},{"name":"teichoic acid glycerol transferase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047355"}


id: PBO:0090794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa1","termid":"PBO:0090794"}


id: PBO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKA divergent transcript","termid":"PBO:0043012"}


id: PBO:0027582
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_vacuole_during_nitrogen_starvation","termid":"PBO:0027582"}


id: FYPO:0006370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of subtelomeric heterochromatin.","definition_xrefs":["GO:1990707","PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein exchange at subtelomeric heterochromatin","synonyms":[{"name":"decreased protein exchange at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein exchange at telomeric heterochromatin","type":"related"},{"name":"decreased protein motility on subtelomeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at subtelomeric heterochromatin","type":"exact"}],"termid":"FYPO:0006370"}


id: PR:Q9UUC8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L43, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L51, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.12","secondary_identifiers":["UniProtKB:Q9UUC8"],"synonyms":[{"name":"Spom972h-MRPL43","type":"exact"}],"termid":"PR:Q9UUC8"}


id: PBO:0086176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the normal accumulation of 25S and 5.8S rRNAs; nucleolar protein; associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit","termid":"PBO:0086176"}


id: GO:0019515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate UDP-galactose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose catabolic process via UDP-galactose","synonyms":[{"name":"lactose breakdown via UDP-galactose","type":"exact"},{"name":"lactose degradation via UDP-galactose","type":"exact"}],"termid":"GO:0019515"}


id: PBO:0082291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine N5 methyltransferase; methylates ribosomal protein Rpl12 (L12) on Arg67; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0082291"}


id: GO:0021974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the trigeminothalamic tract, one of the major routes of nociceptive and temperature signaling from the face.","definition_xrefs":["ISBN:0878937420","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminothalamic tract morphogenesis","termid":"GO:0021974"}


id: GO:0000350
data:
  {"annotated_genes":["SJAG_02455","SJAG_01214","SJAG_01152","SJAG_01200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100933,104944,105625,110430],"is_not":false,"summary":null,"term":"GO:0000350"}]},"cv_name":"biological_process","definition":"Conformational rearrangement of the spliceosomal complex containing the RNA products from the 1st step of splicing to form the catalytic site for the second step of splicing.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_02455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"generation of catalytic spliceosome for second transesterification step","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000358","GO:0000359"],"synonyms":[{"name":"catalytic spliceosome assembly for second transesterification step","type":"related"},{"name":"formation of catalytic U12-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic U2-type spliceosome for second transesterification step","type":"narrow"},{"name":"formation of catalytic spliceosome for second transesterification step","type":"exact"},{"name":"formation of spliceosomal A2-2 complex","type":"narrow"},{"name":"formation of spliceosomal C1 complex","type":"narrow"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"},{"name":"spliceosomal A2-3 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-3 complex formation","type":"narrow"},{"name":"spliceosomal C2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C2 complex formation","type":"narrow"}],"termid":"GO:0000350","terms_by_termid":{"GO:0000350":null}}


id: GO:0102477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-glucosyl-2,5,7-trihydroxyflavanone = H+ + 6C-hexosyl chrysin + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5,7-trihydroxyflavanone 6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14088"],"termid":"GO:0102477"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: GO:0030808
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide anabolism","type":"exact"},{"name":"regulation of nucleotide biosynthesis","type":"exact"},{"name":"regulation of nucleotide formation","type":"exact"},{"name":"regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030808","terms_by_termid":{"GO:1905706":null}}


id: PBO:0062773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 55 subfamily B member 1 pseudogene","termid":"PBO:0062773"}


id: PBO:0003671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transporter (predicted)","termid":"PBO:0003671"}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["GOC:dph","PMID:24463506","PMID:14602517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: FYPO:0004581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is increased.","definition_xrefs":["GO:0007329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased transcriptional response to pheromone","synonyms":[{"name":"increased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004581"}


id: GO:0051925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051925)","synonyms":[{"name":"regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"regulation of calcium transport via voltage-gated calcium channel","type":"exact"}],"termid":"GO:0051925"}


id: PBO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV stimulated scaffold protein A","termid":"PBO:0080116"}


id: PBO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 5","termid":"PBO:0047742"}


id: GO:0019166
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107399],"is_not":false,"summary":null,"term":"GO:0019166"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:33763","Reactome:R-HSA-6786720","Reactome:R-HSA-6809810","Reactome:R-HSA-8952873","MetaCyc:TRANSENOYLCOARED-RXN"],"synonyms":[{"name":"NADPH-dependent trans-2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ trans-2-oxidoreductase activity","type":"related"},{"name":"reductase, trans-enoyl coenzyme A","type":"related"}],"termid":"GO:0019166","terms_by_termid":{"GO:0019166":null}}


id: GO:0106219
data:
  {"annotated_genes":["SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99536],"is_not":false,"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of zinc.","definition_xrefs":["GOC:vw","PMID:31239353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"zinc ion sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106219","terms_by_termid":{"GO:0106219":null}}


id: FYPO:0007324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of histone H4 in cell","synonyms":[{"name":"decreased accumulation of histone H4 in cell","type":"related"},{"name":"decreased cellular histone H4 level","type":"exact"},{"name":"decreased histone H4 level during vegetative growth","type":"exact"},{"name":"decreased level of histone H4 in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H4 in cell during vegetative growth","type":"exact"},{"name":"reduced level of histone H4 in cell","type":"exact"}],"termid":"FYPO:0007324"}


id: PBO:0058301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4675","termid":"PBO:0058301"}


id: GO:0004692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"cGMP dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cGMP-dependent protein kinase activity","secondary_identifiers":["Reactome:R-HSA-1475422","Reactome:R-HSA-1497853","Reactome:R-HSA-418442","Reactome:R-HSA-418549","EC:2.7.11.12"],"synonyms":[{"name":"3':5'-cyclic GMP-dependent protein kinase activity","type":"related"},{"name":"ATP:protein phosphotransferase (cGMP-dependent) activity","type":"related"},{"name":"PKG","type":"related"},{"name":"PKG 1alpha","type":"related"},{"name":"PKG 1beta","type":"related"},{"name":"PKG II","type":"related"},{"name":"STK23","type":"related"},{"name":"cGMP-dependent protein kinase ibeta activity","type":"related"},{"name":"guanosine 3':5'-cyclic monophosphate-dependent protein kinase activity","type":"related"}],"termid":"GO:0004692"}


id: PBO:0059874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 11","termid":"PBO:0059874"}


id: PBO:0080785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 5","termid":"PBO:0080785"}


id: GO:0033871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate; modifies selected glucosamine residues preceded by GlcA2S.","definition_xrefs":["EC:2.8.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"[heparan sulfate]-glucosamine 3-sulfotransferase 2 activity","secondary_identifiers":["MetaCyc:2.8.2.29-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:[heparan sulfate]-glucosamine 3-sulfotransferase activity","type":"broad"},{"name":"3-OST-2","type":"related"},{"name":"glucosaminyl 3-O-sulfotransferase 2 activity","type":"related"},{"name":"glucosaminyl 3-O-sulfotransferase activity","type":"broad"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2 activity","type":"related"},{"name":"heparan sulfate D-glucosaminyl 3-O-sulfotransferase activity","type":"broad"},{"name":"heparin-glucosamine 3-sulfotransferase 2 activity","type":"related"},{"name":"isoform/isozyme 2 (3-OST-2, HS3ST2)","type":"related"}],"termid":"GO:0033871"}


id: PBO:0110391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR9 pseudogene 1","termid":"PBO:0110391"}


id: PBO:0003958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Sop2","termid":"PBO:0003958"}


id: PBO:0083769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome lid; similar to the p58 subunit of the human 26S proteasome; temperature-sensitive alleles cause metaphase arrest, suggesting a role for the proteasome in cell cycle control","termid":"PBO:0083769"}


id: GO:0016222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of procollagen trans-4-hydroxy-L-proline and succinate from procollagen L-proline and 2-oxoglutarate, requiring Fe2+ and ascorbate. Contains two alpha subunits that contribute to most parts of the catalytic sites, and two beta subunits that are identical to protein-disulfide isomerase.","definition_xrefs":["PMID:7753822","PMID:14500733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex","type":"related"},{"name":"prolyl 4-hydroxylase complex","type":"broad"}],"termid":"GO:0016222"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: PBO:0066979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 282","termid":"PBO:0066979"}


id: PBO:0026709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_binding","termid":"PBO:0026709"}


id: GO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases, that occurs in neutrophils, monocytes, and macrophages shortly after phagocytosing material. An enhanced uptake of oxygen leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals, which play a part in microbiocidal activity.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory burst involved in defense response","termid":"GO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst after phagocytosis","synonyms":[{"name":"metabolic burst after phagocytosis","type":"exact"},{"name":"oxidative burst after phagocytosis","type":"exact"}],"termid":"GO:0045728"}


id: PBO:0066694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enriched in melanoma 3","termid":"PBO:0066694"}


id: GO:0016146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, initiation (obsolete GO:0016146)","synonyms":[{"name":"protein-synthesizing GTPase activity, initiation","type":"exact"}],"termid":"GO:0016146"}


id: PBO:0090842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein, human TMEM186 ortholog, implicated in respiratory complex assembly","termid":"PBO:0090842"}


id: PBO:0049130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 1","termid":"PBO:0049130"}


id: GO:0030007
data:
  {"annotated_genes":["SJAG_04760","SJAG_02883","SJAG_01353","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85637,91542,92840,93099],"is_not":false,"summary":null,"term":"GO:0030007"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of potassium ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"potassium ion homeostasis","termid":"GO:0055075"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_01541":null,"SJAG_02883":null,"SJAG_04760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular potassium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0017079"],"synonyms":[{"name":"cellular potassium ion homeostasis","type":"exact"}],"termid":"GO:0030007","terms_by_termid":{"GO:0030007":null}}


id: GO:0140572
data:
  {"annotated_genes":["SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98864],"is_not":false,"summary":null,"term":"GO:0140572"}]},"cv_name":"biological_process","definition":"The division of a vacuole within a cell to form two or more separate vacuoles.","definition_xrefs":["PMID:19643199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole fission","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140572","terms_by_termid":{"GO:0140572":null}}


id: PBO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific SAP domain containing protein","termid":"PBO:0018107"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: GO:1905309
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cohesin loading.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cohesin loading","termid":"GO:0071922"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to chromatin","termid":"GO:0120187"},{"relation_name":"positively_regulates","term_name":"cohesin loading","termid":"GO:0071921"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cohesin association with chromatin","type":"exact"},{"name":"positive regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:1905309","terms_by_termid":{"GO:1905406":null}}


id: GO:0034257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nicotinamide riboside, which is a pyridine-3-carboxamide covalently bonded to a ribose sugar, from one side of a membrane to the other.","definition_xrefs":["GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transmembrane transporter activity","termid":"GO:0005337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nicotinamide riboside transmembrane transporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN0-481","RHEA:33163"],"termid":"GO:0034257"}


id: PBO:0063559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 3","termid":"PBO:0063559"}


id: PBO:0081749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 679","termid":"PBO:0081749"}


id: GO:0043528
data:
  {"annotated_genes":["SJAG_04890","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92320,100233],"is_not":false,"summary":null,"term":"GO:0043528"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNA. In S. cerevisiae, this complex consists of at least two subunits, Trm11p and Trm112p.","definition_xrefs":["PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04181":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m2G10) methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043528","terms_by_termid":{"GO:0043528":null}}


id: GO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of methanol to methyl-Coenzyme M.","definition_xrefs":["MetaCyc:CO2FORM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol oxidation","termid":"GO:0015946"}


id: PBO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 family member C","termid":"PBO:0051003"}


id: PR:O42667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssm4 gene.","definition_xrefs":["UniProtKB:O42667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein ssm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.13c","synonyms":[{"name":"Spom972h-ssm4","type":"exact"}],"termid":"PR:O42667"}


id: PATO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular placement quality inhering in a bearer by virtue of the bearer's placement at an angle that is greater than 180 degrees but less than 360 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reflex angle to","termid":"PATO:0001055"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PBO:0065759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin and HIN domain family member 5, pseudogene","termid":"PBO:0065759"}


id: GO:0140672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and possibly H4. Shares the histone acetylation (HAT) module of GCN5/PCAF-ADA2-ADA3-SGF29 (or orthologs) with the related SAGA complex (GO:0000124). Contains HAT subunits GCN5 or PCAF in a mutually exclusive manner. In addition to the HAT module contains DR1/NC2B, KAT14, MBIP, WDR5, YEATS2 and ZZZ3 or orthologs. Also regulates the activity of non-histone targets and orchestrates mitotic progression by regulating Cyclin A degradation through acetylation.","definition_xrefs":["PMID:19936620","PMID:20562830","GOC:bhm","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"ATAC complex","synonyms":[{"name":"ADA2A-containing complex","type":"exact"},{"name":"Ada Two-A containing complex","type":"exact"},{"name":"Ada two A containing complex","type":"exact"},{"name":"Ada-Two-A-containing complex","type":"exact"},{"name":"G-ATAC complex","type":"exact"},{"name":"KAT2A-containing ATAC complex","type":"exact"},{"name":"KAT2B-containing ATAC complex","type":"exact"}],"termid":"GO:0140672"}


id: PBO:0055232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2659","termid":"PBO:0055232"}


id: PBO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 3","termid":"PBO:0046622"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["PubMed:11572972","ChEBI:2311","PubMed:19833098","RESID:AA0595","PubMed:10830969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: PR:Q11118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prostaglandin E synthase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein wos2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.13","secondary_identifiers":["UniProtKB:Q11118"],"synonyms":[{"name":"Spom972h-PTGES3","type":"exact"},{"name":"p21 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q11118"}


id: GO:0008594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a photoreceptor cell are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a photoreceptor cell, a sensory cell that reacts to the presence of light. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"photoreceptor cell development","termid":"GO:0042461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell morphogenesis","synonyms":[{"name":"photoreceptor development","type":"related"}],"termid":"GO:0008594"}


id: PBO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin F","termid":"PBO:0044197"}


id: GO:0120292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["GOC:mah","GOC:krc","PMID:28586299","PMID:23093942","PMID:31149897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"positively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"positive regulation of homologous recombination dependent replication fork recovery","type":"related"},{"name":"positive regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"positive regulation of recombination-dependent DNA replication","type":"exact"}],"termid":"GO:0120292"}


id: PR:O74749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hse1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class E vacuolar protein-sorting machinery protein hse1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.08","synonyms":[{"name":"Spom972h-hse1","type":"exact"}],"termid":"PR:O74749"}


id: GO:1902700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to butan-1-ol.","definition_xrefs":["PMID:18727018","PMID:19539744","GOC:mengo_curators","GO_REF:0000093","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to butan-1-ol (obsolete GO:1902700)","synonyms":[{"name":"pentose breakdown to butan-1-ol","type":"exact"},{"name":"pentose catabolic process to 1-butanol","type":"exact"},{"name":"pentose catabolic process to butanol","type":"exact"},{"name":"pentose catabolism to butan-1-ol","type":"exact"},{"name":"pentose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902700"}


id: PBO:0057140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR219A2 host gene","termid":"PBO:0057140"}


id: GO:0042065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell growth","termid":"GO:0042065"}


id: SO:0001928
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication of the distal region of a chromosome.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duplication","termid":"SO:1000035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal_duplication","synonyms":[{"name":"distal duplication","type":"exact"}],"termid":"SO:0001928"}


id: GO:0003723
data:
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id: GO:1901163
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophoblast cell migration","termid":"GO:1901163"}


id: GO:0102124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A12 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A12 + H2O + NAD(P).","definition_xrefs":["EC:1.14.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"gibberellin A12 16alpha,17 epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11387"],"termid":"GO:0102124"}


id: GO:0048352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the paraxial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm structural organization","synonyms":[{"name":"paraxial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048352"}


id: PBO:0073236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1","termid":"PBO:0073236"}


id: PBO:0029362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromeric_outer_repeat_transcript_level","termid":"PBO:0029362"}


id: SO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA regions delimited by different nonspurious TSS-TTS pairs.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_unit","synonyms":[{"name":"transcription unit","type":"exact"}],"termid":"SO:0002301"}


id: PBO:0079112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 15","termid":"PBO:0079112"}


id: GO:0070966
data:
  {"annotated_genes":["SJAG_04283","SJAG_01936","SJAG_02601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103255,110178,112098],"is_not":false,"summary":null,"term":"GO:0070966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA with stalls in translation elongation.","definition_xrefs":["PMID:16554824","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01936":null,"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, no-go decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"no-go decay","type":"exact"},{"name":"no-go mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, no-go decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, no-go decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, no-go decay","type":"exact"}],"termid":"GO:0070966","terms_by_termid":{"GO:0070966":null}}


id: GO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 2 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["PMID:22754630","PMID:348711799","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"radial spoke head 2","synonyms":[{"name":"radial spokehead 2","type":"exact"}],"termid":"GO:0120337"}


id: MOD:00591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15549660","Unimod:271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:00591"}


id: GO:0035288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning the insect head anlage into procephalic (labral, (ocular), antennal and intercalary) segments. The procephalic segments lie anterior to the gnathal (posterior head) segments, and are pattered by different segmentation gene cascades to the abdominal, thoracic and posterior head (gnathal) segments.","definition_xrefs":["PMID:15382136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head segmentation","termid":"GO:0035287"},{"relation_name":"part_of","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior head segmentation","synonyms":[{"name":"procephalic segmentation","type":"related"}],"termid":"GO:0035288"}


id: PBO:0090854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II Urg1","termid":"PBO:0090854"}


id: PBO:0109093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPO11 initiator of meiotic double strand breaks","termid":"PBO:0109093"}


id: GO:0044818
data:
  {"annotated_genes":["SJAG_02098","SJAG_02563","SJAG_03026","SJAG_01429","SJAG_03942","SJAG_02771","SJAG_01873","SJAG_01044","SJAG_01680","SJAG_04287","SJAG_02074","SJAG_03695","SJAG_02576","SJAG_00364","SJAG_03160","SJAG_01010","SJAG_01605","SJAG_02266","SJAG_01146","SJAG_05373","SJAG_03927","SJAG_01076","SJAG_01205","SJAG_00640","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88625,103918,87535,85248,108109,102691,96632,112872,105394,113162,90068,90046,113331,112130,99420,95453,95287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[86333,97148,102692,107804,113081,96633,113758,95454,84686,87894,85249,90048,87536,110330,105395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic G2/M transition checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044818","terms_by_termid":{"GO:0007095":null,"GO:0033314":null}}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: PBO:0053593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 620","termid":"PBO:0053593"}


id: PATO:0002265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's disposition to exhibit marked activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioural activity","termid":"PATO:0002265"}


id: PBO:0113485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene is absent from the reference genome, but present in various other strains' genomes; similar to MAL63","termid":"PBO:0113485"}


id: FYPO:0002507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abolished protein palmitoylation","termid":"FYPO:0002504"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein palmitoylation during vegetative growth","synonyms":[{"name":"abolished protein palmitoylation during mitotic cell cycle","type":"related"},{"name":"protein palmitoylation abolished during vegetative growth","type":"exact"},{"name":"protein palmitoylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002507"}


id: GO:0007111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis II, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cytokinesis","synonyms":[{"name":"cytokinesis after meiosis II","type":"exact"}],"termid":"GO:0007111"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: PBO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF1AX pseudogene 1","termid":"PBO:0046001"}


id: PBO:0051767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPO9 antisense RNA 1","termid":"PBO:0051767"}


id: PBO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit (predicted)","termid":"PBO:0002599"}


id: PBO:0110375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 1","termid":"PBO:0110375"}


id: GO:0043331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dsRNA","synonyms":[{"name":"response to double-stranded RNA","type":"exact"}],"termid":"GO:0043331"}


id: PBO:0052946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRTCAP2 pseudogene 1","termid":"PBO:0052946"}


id: PBO:0109632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C (pseudogene)","termid":"PBO:0109632"}


id: PBO:0029438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029438"}


id: PBO:0068289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEK-C17orf49 readthrough","termid":"PBO:0068289"}


id: PR:P87323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcs4 gene.","definition_xrefs":["UniProtKB:P87323","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response regulator mcs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.10","synonyms":[{"name":"Spom972h-mcs4","type":"exact"},{"name":"mitotic catastrophe suppressor 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87323"}


id: GO:0048894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in a lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in any lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron axonogenesis","termid":"GO:0021955"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: GO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil mediated immunity","termid":"GO:0002446"}


id: PBO:0076615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A","termid":"PBO:0076615"}


id: PBO:0085786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase","termid":"PBO:0085786"}


id: FYPO:0000901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A  microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule growth (polymerization), catastrophe (the transition from growth to shrinkage), shrinkage (depolymerization), or rescue (the transition from shrinkage to growth) is abnormal.","definition_xrefs":["PomBase:val","GO:0031109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule dynamics during vegetative growth","synonyms":[{"name":"abnormal microtubule growth or shrinkage during vegetative growth","type":"narrow"},{"name":"abnormal microtubule polymerisation or depolymerisation during vegetative growth","type":"narrow"},{"name":"abnormal microtubule polymerization or depolymerization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000901"}


id: PBO:0111296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interpro_version","termid":"PBO:0111296"}


id: GO:0042807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-enclosed sac that takes up most of the volume of a mature plant cell. Functions include storage, separation of toxic byproducts, and cell growth determination.","definition_xrefs":["Wikipedia:Vacuole","ISBN:9780815341116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"central vacuole","termid":"GO:0042807"}


id: PBO:0013836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transmembrane transporter family protein Ctl1","termid":"PBO:0013836"}


id: FYPO:0002051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is swollen, elongated, has no septum, and contains more than one nucleus. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"elongated multinucleate aseptate vegetative cell","termid":"FYPO:0002049"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"swollen elongated multinucleate aseptate vegetative cell","synonyms":[{"name":"elongated multinucleate aseptate vegetative cell with increased cell volume","type":"exact"},{"name":"enlarged elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"large elongated multinucleate aseptate vegetative cell","type":"related"},{"name":"swollen elongated multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"swollen elongated multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002051"}


id: GO:0016467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.3","TC:3.A.2.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-translocating F-type ATPase activity (obsolete GO:0016467)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"F1-ATPase activity","type":"exact"},{"name":"hydrogen-translocating F-type ATPase activity","type":"exact"},{"name":"proton-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016467"}


id: GO:0047547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S,3S)-2-methylcitrate = cis-2-methylaconitate + H2O.","definition_xrefs":["EC:4.2.1.79","RHEA:17725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-methylcitrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04424","MetaCyc:2-METHYLCITRATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"(2S,3S)-2-hydroxybutane-1,2,3-tricarboxylate hydro-lyase [(Z)-but-2-ene-1,2,3-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxybutane-1,2,3-tricarboxylate hydro-lyase activity","type":"related"},{"name":"2-methylcitrate hydro-lyase activity","type":"related"},{"name":"prpD","type":"related"}],"termid":"GO:0047547"}


id: GO:1902239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:16571598","GOC:mtg_apoptosis","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902219"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"}],"termid":"GO:1902239"}


id: PR:Q9UUB0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.14c","synonyms":[{"name":"Spom972h-mrps17","type":"exact"}],"termid":"PR:Q9UUB0"}


id: PBO:0073840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 15, pseudogene","termid":"PBO:0073840"}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_01831","SJAG_05019","SJAG_03926","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83953,103820,103898,113119],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of protein homodimerization activity","termid":"GO:0043496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein homodimerization activity","termid":"GO:0090073"}


id: GO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermatid nuclear differentiation","synonyms":[{"name":"down regulation of spermatid nuclear differentiation","type":"exact"},{"name":"down-regulation of spermatid nuclear differentiation","type":"exact"},{"name":"downregulation of spermatid nuclear differentiation","type":"exact"},{"name":"inhibition of spermatid nuclear differentiation","type":"narrow"}],"termid":"GO:0045701"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["GOC:BHF","PMID:10966616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: PBO:0074160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F3 antisense RNA 1","termid":"PBO:0074160"}


id: GO:0016880
data:
  {"annotated_genes":["SJAG_00359","SJAG_04544","SJAG_01845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017178"},{"annotations":[60713,90381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to ammonia (NH3) or an amide via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null,"SJAG_04544":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"acid-ammonia (or amide) ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.1.-"],"synonyms":[{"name":"amide synthase activity","type":"exact"}],"termid":"GO:0016880","terms_by_termid":{"GO:0004356":null,"GO:0017178":null}}


id: PBO:0063065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 4 (inactive)","termid":"PBO:0063065"}


id: GO:0102678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5alpha,22S,24R)-22-hydroxyergostan-3-one + NADP = H+ + (22S)-22-hydroxycampest-4-en-3-one + NADPH.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 22-alpha-hydroxy-campest-4-en-3-one,NADPH:steroid 5alpha-reductase activity (obsolete GO:0102678)","termid":"GO:0102678"}


id: MOD:01413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a trihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trihydroxylated residue","termid":"MOD:01409"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated leucine","synonyms":[{"name":"Hy3Leu","type":"exact"}],"termid":"MOD:01413"}


id: PBO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 14","termid":"PBO:0061125"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: PBO:0047425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc alpha receptor","termid":"PBO:0047425"}


id: PBO:0036219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_prospore_membrane_formation","termid":"PBO:0036219"}


id: GO:1990179
data:
  {"annotated_genes":["SJAG_02831","SJAG_00279","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114681,88425,106879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the actomyosin contractile ring.","definition_xrefs":["GOC:mah","PMID:23349808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring","type":"exact"}],"termid":"GO:1990179","terms_by_termid":{"GO:1904498":null}}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: GO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"part_of","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serine phosphorylation of STAT protein","secondary_identifiers":["GO:0033136"],"synonyms":[{"name":"serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0042501"}


id: PBO:0054597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2000","termid":"PBO:0054597"}


id: GO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"group III metabotropic glutamate receptor activity","termid":"GO:0001642"}


id: PBO:0034412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_maturation_of","termid":"PBO:0034412"}


id: PBO:0056858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA SH3 domain ER export factor 3","termid":"PBO:0056858"}


id: MOD:01092
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesitylene-2-sulfonyl","synonyms":[{"name":"Mts","type":"exact"}],"termid":"MOD:01092"}


id: PBO:0069950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1243, pseudogene","termid":"PBO:0069950"}


id: PBO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B (predicted)","termid":"PBO:0004701"}


id: GO:0006647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidyl-N-monomethylethanolamine (PMME), a derivative of phosphatidylethanolamine with a methylated amine group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine biosynthetic process","termid":"GO:0006646"},{"relation_name":"is_a","term_name":"phosphatidyl-N-monomethylethanolamine metabolic process","termid":"GO:0046468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidyl-N-monomethylethanolamine biosynthetic process","synonyms":[{"name":"PMME biosynthesis","type":"exact"},{"name":"PMME biosynthetic process","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine anabolism","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine biosynthesis","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine formation","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine synthesis","type":"exact"}],"termid":"GO:0006647"}


id: PBO:0065942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 2","termid":"PBO:0065942"}


id: PBO:0039922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF19 antisense RNA 1","termid":"PBO:0039922"}


id: PBO:0039899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 3","termid":"PBO:0039899"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104379],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: GO:1903764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion export across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:19646991","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"regulates","term_name":"potassium ion export across plasma membrane","termid":"GO:0097623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of potassium ion export across plasma membrane","secondary_identifiers":["GO:1902302"],"synonyms":[{"name":"regulation of potassium export","type":"broad"},{"name":"regulation of potassium export across plasma membrane","type":"broad"},{"name":"regulation of potassium ion export","type":"broad"}],"termid":"GO:1903764"}


id: GO:0035156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a fusion cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. Fusion cells allow the interconnection of adjacent tracheal metameres during tracheal tube fusion.","definition_xrefs":["PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell type specification, open tracheal system","termid":"GO:0035153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion cell fate specification","termid":"GO:0035156"}


id: GO:0102460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol-3-gentiobioside + UDP-L-rhamnose = H+ + kaempferol-3-O-gentiobioside-7-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol 3-gentiobioside 7-O-rhamnosyltransferase activity (obsolete GO:0102460)","termid":"GO:0102460"}


id: GO:0004250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, preferably a neutral or hydrophobic one, from a polypeptide. Aminoacyl-arylamides are poor substrates.","definition_xrefs":["EC:3.4.11.22"],"gene_count":0,"genotype_count":0,"name":"obsolete aminopeptidase I activity (obsolete GO:0004250)","secondary_identifiers":["MetaCyc:3.4.11.22-RXN"],"synonyms":[{"name":"aminopeptidase I activity","type":"exact"},{"name":"aminopeptidase III activity","type":"related"},{"name":"aminopeptidase yscI activity","type":"narrow"},{"name":"leucine aminopeptidase IV activity","type":"related"},{"name":"vacuolar aminopeptidase I activity","type":"narrow"},{"name":"yeast aminopeptidase I","type":"related"}],"termid":"GO:0004250"}


id: GO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018416"}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: PBO:0081440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF295 antisense RNA 1","termid":"PBO:0081440"}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: GO:0019112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + glucose = phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"phenanthrol glycosyltransferase activity","termid":"GO:0019112"}


id: PBO:0055199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2624","termid":"PBO:0055199"}


id: GO:1901474
data:
  {"annotated_genes":["SJAG_03652","SJAG_03256","SJAG_03400","SJAG_04673","SJAG_02962","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[93469,99942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[99741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[86273,86274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015234"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of azoles, heterocyclic compound found in many biologically important substances, from one side of a membrane to the other.","definition_xrefs":["Wikipedia:Azole","ISBN:3527307206","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"azole transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045118"],"synonyms":[{"name":"azole transporter activity","type":"related"}],"termid":"GO:1901474","terms_by_termid":{"GO:0005290":null,"GO:0015234":null,"GO:0034216":null,"GO:0090422":null}}


id: PBO:0031145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_alpha-glucan_level","termid":"PBO:0031145"}


id: PBO:0091085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated NEDD8-dissociated protein Knd1","termid":"PBO:0091085"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_04117","SJAG_04898","SJAG_04497","SJAG_16453","SJAG_03601","SJAG_01214","SJAG_03711","SJAG_05212","SJAG_04694","SJAG_03993","SJAG_01504","SJAG_05349","SJAG_00859","SJAG_01810","SJAG_01408","SJAG_00639","SJAG_00414","SJAG_02227","SJAG_02304","SJAG_04783","SJAG_00094","SJAG_00911","SJAG_03687","SJAG_00446","SJAG_02844","SJAG_02722","SJAG_02078"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88399,91495,91704,92268,92939,93778,94116,94545,95137,96783,99110,99288,102472,102618,103245,103728,104839,104941,105304,106128,107356,107816,109176,111048,112028,113274,114926],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["PMID:19239890","GOC:krc","PMID:16540691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: GO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a chromaffin granule.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"chromaffin granule","termid":"GO:0042583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chromaffin granule lumen","termid":"GO:0034466"}


id: PBO:0071651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 15","termid":"PBO:0071651"}


id: GO:1902429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:TermGenie","PMID:22095752","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of water channel activity","termid":"GO:1902427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of water channel activity","synonyms":[{"name":"activation of aquaporin","type":"narrow"},{"name":"activation of water channel activity","type":"narrow"},{"name":"aquaporin activation","type":"narrow"},{"name":"positive regulation of aquaporin","type":"narrow"},{"name":"up regulation of aquaporin","type":"narrow"},{"name":"up regulation of water channel activity","type":"exact"},{"name":"up-regulation of aquaporin","type":"narrow"},{"name":"up-regulation of water channel activity","type":"exact"},{"name":"upregulation of aquaporin","type":"narrow"},{"name":"upregulation of water channel activity","type":"exact"}],"termid":"GO:1902429"}


id: PBO:0085446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of genes in multiple nitrogen degradation pathways; contains DNA binding domain but does not appear to bind the dodecanucleotide sequence present in the promoter region of many genes involved in allantoin catabolism","termid":"PBO:0085446"}


id: PR:Q9USP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12896:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.06c","secondary_identifiers":["UniProtKB:Q9USP1"],"synonyms":[{"name":"SPCC11E10.06c","type":"related"},{"name":"Spom972h-ELP4","type":"exact"}],"termid":"PR:Q9USP1"}


id: PR:000027591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Haspin. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Phos(T3)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/Phos:1","type":"exact"},{"name":"hht2/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht2/Phos(T3)","type":"exact"}],"termid":"PR:000027591"}


id: PR:O43081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.06c gene.","definition_xrefs":["UniProtKB:O43081","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C947.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.06c","synonyms":[{"name":"Spom972h-SPBC947.06c","type":"exact"}],"termid":"PR:O43081"}


id: PBO:0048008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD6 antisense RNA 2","termid":"PBO:0048008"}


id: PBO:0092017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glycine (ucc), mitochondrial","termid":"PBO:0092017"}


id: PBO:0071100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 102","termid":"PBO:0071100"}


id: GO:0097745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the 5' end of a pre-tRNA molecule is converted to that of a mature tRNA in the mitochondrion.","definition_xrefs":["PMID:21307182","PMID:26143376","GOC:pf","PMID:27484477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 5'-end processing","termid":"GO:0000964"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"},{"relation_name":"is_a","term_name":"tRNA 5'-end processing","termid":"GO:0099116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0140053"],"is_obsolete":false,"name":"mitochondrial tRNA 5'-end processing","termid":"GO:0097745"}


id: PR:O74883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12069:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.13","secondary_identifiers":["UniProtKB:O74883"],"synonyms":[{"name":"RNA polymerase III subunit C37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC330.13","type":"related"},{"name":"Spom972h-POLR3E","type":"exact"}],"termid":"PR:O74883"}


id: PBO:0035993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0035993"}


id: PBO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 6","termid":"PBO:0045584"}


id: FYPO:0002221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through the anaphase of meiosis II is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of meiotic anaphase II","synonyms":[{"name":"delayed meiotic anaphase II progression","type":"related"},{"name":"increased duration of meiotic anaphase II progression","type":"exact"},{"name":"prolonged meiotic anaphase II","type":"exact"}],"termid":"FYPO:0002221"}


id: GO:0042707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into photoreceptor cell in the ocellus. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"},{"relation_name":"part_of","term_name":"ocellus photoreceptor cell differentiation","termid":"GO:0042705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus photoreceptor cell fate commitment","termid":"GO:0042707"}


id: PR:O42909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04072","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C16A3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.02c","secondary_identifiers":["UniProtKB:O42909"],"synonyms":[{"name":"Spom972h-ydjL","type":"exact"}],"termid":"PR:O42909"}


id: GO:0097160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.","definition_xrefs":["GOC:sjw","PMID:7583672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"polychlorinated biphenyl binding","synonyms":[{"name":"PCB binding","type":"exact"},{"name":"polychlorobiphenyl binding","type":"exact"}],"termid":"GO:0097160"}


id: PBO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FARSA antisense RNA 1","termid":"PBO:0047304"}


id: PBO:0005379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein x component, Pdx1 (predicted)","termid":"PBO:0005379"}


id: PBO:0068191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 498","termid":"PBO:0068191"}


id: PBO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1A","termid":"PBO:0042564"}


id: GO:1902771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of choline O-acetyltransferase activity.","definition_xrefs":["GOC:TermGenie","PMID:7576634","GO_REF:0000059","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of choline O-acetyltransferase activity","termid":"GO:1902769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of choline O-acetyltransferase activity","synonyms":[{"name":"activation of CHOACTase activity","type":"narrow"},{"name":"activation of acetyl-CoA:choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline O-acetyltransferase activity","type":"narrow"},{"name":"activation of choline acetylase activity","type":"narrow"},{"name":"activation of choline acetyltransferase activity","type":"narrow"},{"name":"positive regulation of CHOACTase activity","type":"exact"},{"name":"positive regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"positive regulation of choline acetylase activity","type":"exact"},{"name":"positive regulation of choline acetyltransferase activity","type":"exact"},{"name":"up regulation of CHOACTase activity","type":"exact"},{"name":"up regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up regulation of choline acetylase activity","type":"exact"},{"name":"up regulation of choline acetyltransferase activity","type":"exact"},{"name":"up-regulation of CHOACTase activity","type":"exact"},{"name":"up-regulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline O-acetyltransferase activity","type":"exact"},{"name":"up-regulation of choline acetylase activity","type":"exact"},{"name":"up-regulation of choline acetyltransferase activity","type":"exact"},{"name":"upregulation of CHOACTase activity","type":"exact"},{"name":"upregulation of acetyl-CoA:choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline O-acetyltransferase activity","type":"exact"},{"name":"upregulation of choline acetylase activity","type":"exact"},{"name":"upregulation of choline acetyltransferase activity","type":"exact"}],"termid":"GO:1902771"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02427","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: GO:0016675
data:
  {"annotated_genes":["SJAG_MIT04","SJAG_07007","SJAG_MIT20","SJAG_00976","SJAG_03337","SJAG_01077","SJAG_02504","SJAG_01190","SJAG_MIT13","SJAG_05629","SJAG_01355"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84339,115112,88053,111518,115087,115111,104364,112888,110297,110723,115065,115086,85348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_02504":null,"SJAG_03337":null,"SJAG_05629":null,"SJAG_07007":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a heme group of donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.9.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors","type":"exact"},{"name":"oxidoreductase activity, acting on heme group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016675","terms_by_termid":{"GO:0004129":null}}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: PBO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 4","termid":"PBO:0045219"}


id: PBO:0077869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 4","termid":"PBO:0077869"}


id: PBO:0090961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase","termid":"PBO:0090961"}


id: GO:0090032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"}


id: PBO:0056684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 8, small nucleolar RNA host gene","termid":"PBO:0056684"}


id: GO:0030884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exogenous lipid antigen (examples include microbial lipids and glycolipids).","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid antigen binding","termid":"GO:0030882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"exogenous lipid antigen binding","termid":"GO:0030884"}


id: SO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region where the sequence differs from that of a specified sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_difference","synonyms":[{"name":"INSDC_feature:misc_difference","type":"exact"},{"name":"sequence difference","type":"exact"}],"termid":"SO:0000413"}


id: PBO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 2","termid":"PBO:0045869"}


id: PBO:0088942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) ATPase subunit Get3","termid":"PBO:0088942"}


id: PBO:0031863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay","termid":"PBO:0031863"}


id: PBO:0044730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 12, pseudogene","termid":"PBO:0044730"}


id: GO:0110144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a magnetosome, a membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria.","definition_xrefs":["PMID:27620945","GOC:aa"],"gene_count":0,"genotype_count":0,"name":"obsolete magnetosome part (obsolete GO:0110144)","termid":"GO:0110144"}


id: GO:1904856
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasmic membrane-bounded vesicle lumen that is part of a cytolytic granule.","definition_xrefs":["GOC:TermGenie","PMID:17272266","GO_REF:0000064","PMID:21247065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule lumen","synonyms":[{"name":"cytolytic granule cytoplasmic membrane-bounded vesicle lumen","type":"exact"},{"name":"cytoplasmic membrane-bounded vesicle lumen of cytolytic granule","type":"exact"},{"name":"cytoplasmic membrane-enclosed vesicle lumen of cytolytic granule","type":"exact"}],"termid":"GO:1904856"}


id: GO:0007570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent accumulation of genetic damage (obsolete GO:0007570)","synonyms":[{"name":"age dependent accumulation of genetic damage","type":"exact"}],"termid":"GO:0007570"}


id: PBO:0083713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in the second step of GPI anchor assembly; the second step is the de-N-acetylation of the N-acetylglucosaminylphosphatidylinositol intermediate; functional homolog of human PIG-Lp; GPI stands for glycosylphosphatidylinositol","termid":"PBO:0083713"}


id: PBO:0046938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member C","termid":"PBO:0046938"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: PBO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; has specificity for serine, threonine, and tyrosine residues; has a role in the DNA synthesis phase of the cell cycle","termid":"PBO:0086088"}


id: PBO:0017732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transmembrane transporter Atm1","termid":"PBO:0017732"}


id: GO:0060963
data:
  {"annotated_genes":["SJAG_01243","SJAG_03241","SJAG_02723","SJAG_02671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84102,85589,89595,102734],"is_not":false,"summary":null,"term":"GO:0060963"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:tb","GOC:txnOH","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0060962"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01243":null,"SJAG_02671":null,"SJAG_02723":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of ribosomal protein gene transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060963","terms_by_termid":{"GO:0060963":null}}


id: MOD:00778
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 182.9-183.0 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 182.9-183.0 Da","termid":"MOD:00778"}


id: PBO:0079173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 2","termid":"PBO:0079173"}


id: GO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription that contributes to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in anterior/posterior axis specification (obsolete GO:0044324)","termid":"GO:0044324"}


id: GO:1901938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-exo-alpha-bergamotene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene metabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene metabolism","type":"exact"}],"termid":"GO:1901938"}


id: PBO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0018220"}


id: PBO:0074975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-17","termid":"PBO:0074975"}


id: GO:0102596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimara-8(14),15-diene + NADPH + H+ + O2 = ent-sandaracopimaradien-3beta-ol + NADP + H2O.","definition_xrefs":["EC:1.14.14.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome P450 dependent ent-sandaracopimaradiene 3-hydroxylase activity","secondary_identifiers":["RHEA:41464","MetaCyc:RXN-15379"],"termid":"GO:0102596"}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: PBO:0060140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanistic target of rapamycin kinase","termid":"PBO:0060140"}


id: PBO:0082227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, ubiquitin ligase adaptor for Rsp5p; regulates starvation- and substrate-induced Ub-dependent endocytosis of select plasma membrane localized amino acid transporters; substrate of Rsp5p-mediated Lys63-polyubiquitination and Ubp2-mediated deubiquitination; promoter contains several Gcn4p binding sites required for induction in response to starvation via Gcn4p and the general amino acid control pathway; ECM21 has a paralog, CSR2, that arose from the whole genome duplication","termid":"PBO:0082227"}


id: PBO:0061579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM intronic transcript","termid":"PBO:0061579"}


id: PBO:0073448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 2","termid":"PBO:0073448"}


id: GO:1904695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:rph","PMID:22158624","GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle contraction","termid":"GO:0003056"},{"relation_name":"is_a","term_name":"positive regulation of vasoconstriction","termid":"GO:0045907"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"activation of vascular smooth muscle contraction","type":"narrow"},{"name":"positive regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up regulation of vascular smooth muscle contraction","type":"exact"},{"name":"up-regulation of vascular smooth muscle contraction","type":"exact"},{"name":"upregulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:1904695"}


id: PBO:0013027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CMD1","termid":"PBO:0013027"}


id: PBO:0083033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0083033"}


id: PR:Q9UT91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP protein subunit rmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.08","synonyms":[{"name":"RNA-processing protein rmp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rmp1","type":"exact"}],"termid":"PR:Q9UT91"}


id: PBO:0062028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Q member 1 pseudogene","termid":"PBO:0062028"}


id: GO:0043673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, sculptured layer of the exine, which lies above the nexine.","definition_xrefs":["PMID:5722147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sexine","termid":"GO:0043673"}


id: PBO:0069025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 270, pseudogene","termid":"PBO:0069025"}


id: PBO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21 (predicted)","termid":"PBO:0016111"}


id: PBO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Mzm1","termid":"PBO:0011498"}


id: GO:2000762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenylpropanoid metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of phenylpropanoid metabolic process","synonyms":[{"name":"regulation of phenylpropanoid metabolism","type":"exact"}],"termid":"GO:2000762"}


id: PBO:0047580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3","termid":"PBO:0047580"}


id: PR:P42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.13c","synonyms":[{"name":"Spom972h-rad25","type":"exact"}],"termid":"PR:P42657"}


id: PBO:0089526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase","termid":"PBO:0089526"}


id: SO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that affects one of several possible alleles at that location, such as the major histocompatibility complex (MHC) genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_frequency","termid":"SO:0001763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_variant","synonyms":[{"name":"polymorphic variant","type":"exact"}],"termid":"SO:0001766"}


id: PBO:0065310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 30, pseudogene","termid":"PBO:0065310"}


id: PBO:0034249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causes_or_contributes_to_condition","termid":"PBO:0034249"}


id: GO:2000420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of eosinophil migration","termid":"GO:2000417"},{"relation_name":"is_a","term_name":"regulation of eosinophil extravasation","termid":"GO:2000419"},{"relation_name":"negatively_regulates","term_name":"eosinophil extravasation","termid":"GO:0072682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil extravasation","termid":"GO:2000420"}


id: PBO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 3","termid":"PBO:0043314"}


id: PBO:0069581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 855, pseudogene","termid":"PBO:0069581"}


id: PBO:0011524
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements a double-deletion of S. cerevisiae CYC1 and CYC7","termid":"PBO:0011524"}


id: GO:0030375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of a transcription cofactor that activates transcription in conjunction with a thyroid hormone-dependent nuclear receptor from a RNA polymerase II promoter; does not bind DNA itself.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete thyroid hormone receptor coactivator activity (obsolete GO:0030375)","synonyms":[{"name":"thyroid hormone receptor activator activity","type":"narrow"},{"name":"thyroid hormone receptor co-activator activity","type":"exact"}],"termid":"GO:0030375"}


id: PBO:0027621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_and_hydroxyurea","termid":"PBO:0027621"}


id: GO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound catabolic process","synonyms":[{"name":"flavin-containing compound catabolic process breakdown","type":"exact"},{"name":"flavin-containing compound catabolic process degradation","type":"exact"},{"name":"flavin-containing compound catabolism","type":"exact"},{"name":"riboflavin and derivative catabolic process","type":"related"},{"name":"riboflavin and derivative catabolism","type":"related"},{"name":"vitamin B2 and derivative catabolic process","type":"related"},{"name":"vitamin B2 and derivative catabolism","type":"related"}],"termid":"GO:0042728"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84383],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6.3.2.25-RXN","Reactome:R-HSA-8955706","RHEA:17605"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: PBO:0027396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027396"}


id: PBO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B11","termid":"PBO:0045200"}


id: PBO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase","termid":"PBO:0000143"}


id: GO:0075514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the endosome involved in uptake of a virus into a host cell. Occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents from the endosome into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome lysis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome lysis","type":"exact"}],"termid":"GO:0075514"}


id: PBO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate light chain Dli1/Dil1","termid":"PBO:0011115"}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: PBO:0044907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterosome assembly protein 1","termid":"PBO:0044907"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: PBO:0025455
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperoxaluria","termid":"PBO:0025455"}


id: PBO:0109809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 2","termid":"PBO:0109809"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: PBO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 6","termid":"PBO:0046371"}


id: PBO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 81","termid":"PBO:0052815"}


id: GO:1900750
data:
  {"annotated_genes":["SJAG_05181","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93123,95371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043295"}]},"cv_name":"molecular_function","definition":"Binding to an oligopeptide.","definition_xrefs":["PMID:21854595","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01351":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"oligopeptide binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Oligopeptid binding","type":"related"},{"name":"oligopeptides binding","type":"exact"},{"name":"oligopeptido binding","type":"related"}],"termid":"GO:1900750","terms_by_termid":{"GO:0043295":null}}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: GO:0097429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of an amino acid to another amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate, carried out by a nonribosomal peptide synthase.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"non-ribosomal peptide synthetase activity","termid":"GO:1904091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"amino acid ligation activity by nonribosomal peptide synthase","termid":"GO:0097429"}


id: GO:0060942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized structural and/or functional features of a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac fibroblast cell differentiation","termid":"GO:0060942"}


id: PBO:0048044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 1","termid":"PBO:0048044"}


id: GO:0016740
data:
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id: PBO:0090835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transmembrane transporter Fip1","termid":"PBO:0090835"}


id: GO:0002532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of any molecular mediator of the inflammatory response following an inflammatory stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"production of molecular mediator involved in inflammatory response","synonyms":[{"name":"production of cellular mediator of acute inflammation","type":"related"},{"name":"production of molecular mediator involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002532"}


id: PBO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.4","termid":"PBO:0001861"}


id: GO:0033971
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112443],"is_not":false,"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H+.","definition_xrefs":["EC:3.5.2.17","RHEA:23736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydroxyisourate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.5.2.17-RXN","KEGG_REACTION:R06601"],"synonyms":[{"name":"5-hydroxyisourate amidohydrolase activity","type":"related"},{"name":"5-hydroxyisourate hydrolase activity","type":"related"},{"name":"HIUHase activity","type":"related"}],"termid":"GO:0033971","terms_by_termid":{"GO:0033971":null}}


