# terms

id: FYPO:0006683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006683"}


id: PBO:0038981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 1A","termid":"PBO:0038981"}


id: SO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that affects the functioning of a translational product with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_function_variant","synonyms":[{"name":"translational product variant","type":"exact"}],"termid":"SO:0001539"}


id: FYPO:0004515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which DNA is not visible in a distinct structure corresponding to the nucleus, but is instead diffuse or not visible at all.","definition_xrefs":["PMID:25552606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001320"],"is_obsolete":false,"name":"abnormal chromosome morphology, indistinct DNA","synonyms":[{"name":"abnormal chromosome morphology, indistinct DNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, indistinct DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004515"}


id: FYPO:0004964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer actin cortical patches than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"actin cortical patches present in decreased numbers","synonyms":[{"name":"F-actin patches present in decreased numbers","type":"exact"},{"name":"actin cortical patches present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"actin cortical patches present in decreased numbers during vegetative growth","type":"exact"},{"name":"actin cortical patches present in reduced numbers","type":"exact"},{"name":"actin patches present in decreased numbers","type":"exact"},{"name":"decreased actin cortical patch formation during vegetative growth","type":"related"},{"name":"decreased number of actin cortical patches during vegetative growth","type":"exact"},{"name":"fewer actin cortical patches present during vegetative growth","type":"exact"}],"termid":"FYPO:0004964"}


id: GO:0051514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of unidimensional cell growth","termid":"GO:0051511"},{"relation_name":"is_a","term_name":"regulation of monopolar cell growth","termid":"GO:0051513"},{"relation_name":"negatively_regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monopolar cell growth","synonyms":[{"name":"down regulation of monopolar cell growth","type":"exact"},{"name":"down-regulation of monopolar cell growth","type":"exact"},{"name":"downregulation of monopolar cell growth","type":"exact"},{"name":"inhibition of monopolar cell growth","type":"narrow"}],"termid":"GO:0051514"}


id: GO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis.","definition_xrefs":["GOC:rk","PMID:15536015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, recognition","termid":"GO:0006910"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"recognition of apoptotic cell","synonyms":[{"name":"detection of apoptotic cell","type":"exact"},{"name":"detection of apoptotic cell corpse","type":"exact"},{"name":"detection of cell corpse","type":"exact"},{"name":"recognition of apoptotic cell corpse","type":"exact"},{"name":"recognition of cell corpse","type":"exact"}],"termid":"GO:0043654"}


id: GO:0000372
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94189],"is_not":false,"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).","definition_xrefs":["PMID:11377794","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","termid":"GO:0000376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Group I intron splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000372","terms_by_termid":{"GO:0000372":null}}


id: PBO:0057514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 632","termid":"PBO:0057514"}


id: PBO:0047168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 1","termid":"PBO:0047168"}


id: PBO:0052444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 1","termid":"PBO:0052444"}


id: PBO:0086295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in regulating Swe1p-dependent polarized growth; involved in maintaining Cdc55p in the cytoplasm where it promotes mitotic entry; involved in mitotic exit through Cdc14p regulation; interacts with silencing proteins at telomeres; has a role in Bcy1p localization; implicated in mRNA nuclear export; ZDS1 has a paralog, ZDS2, that arose from the whole genome duplication","termid":"PBO:0086295"}


id: PBO:0077989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformer 2 alpha homolog","termid":"PBO:0077989"}


id: GO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nickel ions within a cell.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular nickel ion homeostasis","synonyms":[{"name":"cellular nickel homeostasis","type":"exact"},{"name":"cellular nickel ion homeostasis","type":"exact"}],"termid":"GO:0035785"}


id: PBO:0028516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028516"}


id: GO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, a specific asymmetric distribution, resulting in the formation of daughter cells of different types.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:0045167"}


id: GO:0043483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pigment anthocyanin, contributing to anthocyanin accumulation in a tissue in response to a UV light stimulus.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"},{"relation_name":"is_a","term_name":"pigment biosynthetic process involved in pigment accumulation","termid":"GO:0043477"},{"relation_name":"part_of","term_name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin biosynthetic process involved in anthocyanin accumulation in response to UV light","synonyms":[{"name":"anthocyanin biosynthesis during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in response to UV light","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"}],"termid":"GO:0043483"}


id: PBO:0059015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 2","termid":"PBO:0059015"}


id: GO:0033729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavan-3-ol + 2 NAD(P)+ = an anthocyanidin + 2 NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthocyanidin reductase activity","secondary_identifiers":["MetaCyc:RXN-10693"],"synonyms":[{"name":"ANR","type":"related"},{"name":"AtANR","type":"related"},{"name":"MtANR","type":"related"},{"name":"flavan-3-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0033729"}


id: PBO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 23","termid":"PBO:0043264"}


id: GO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme and a protein via 3'-L-histidine (otherwise known as pi-heme-histidine, pros-heme-histidine).","definition_xrefs":["RESID:AA0276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-heme linkage via 3'-L-histidine","synonyms":[{"name":"protein-haem linkage via 3'-L-histidine","type":"exact"}],"termid":"GO:0018182"}


id: GO:0021521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron specification","termid":"GO:0021521"}


id: PBO:0027807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_KT5823","termid":"PBO:0027807"}


id: PBO:0081421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 277","termid":"PBO:0081421"}


id: PBO:0067305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 391, pseudogene","termid":"PBO:0067305"}


id: SO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with magnesium ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_magnesium_ion_contact_site","secondary_identifiers":["BS:00187"],"synonyms":[{"name":"Mg_contact_site","type":"exact"},{"name":"polypeptide magnesium ion contact site","type":"exact"}],"termid":"SO:0001098"}


id: PR:P36584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L3-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.06c","synonyms":[{"name":"Spom972h-rpl302","type":"exact"}],"termid":"PR:P36584"}


id: PBO:0073524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 binding domain protein 5 like","termid":"PBO:0073524"}


id: GO:0006227
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114065],"is_not":false,"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUDP, deoxyuridine diphosphate (2'-deoxy-5'-uridylyl phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dUDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUDP anabolism","type":"exact"},{"name":"dUDP biosynthesis","type":"exact"},{"name":"dUDP formation","type":"exact"},{"name":"dUDP synthesis","type":"exact"}],"termid":"GO:0006227","terms_by_termid":{"GO:0006227":null}}


id: GO:2000345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte proliferation","termid":"GO:2000345"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: GO:1900414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of cytokinesis.","definition_xrefs":["GOC:mah","PMID:15509866","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytokinesis by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900414)","termid":"GO:1900414"}


id: PBO:0078144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 23/delta variable 6","termid":"PBO:0078144"}


id: PBO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-receives_input_from","termid":"PBO:0034318"}


id: _global:during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during","secondary_identifiers":["GOREL:0000002"],"termid":"_global:during"}


id: PBO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 114","termid":"PBO:0071112"}


id: GO:0050890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cognition","secondary_identifiers":["Wikipedia:Cognition"],"termid":"GO:0050890"}


id: GO:0099617
data:
  {"annotated_genes":["SJAG_03282","SJAG_00852","SJAG_01806","SJAG_00077","SJAG_00797","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85616,86081,89918,92351],"is_not":false,"summary":null,"term":"GO:0099617"},{"annotations":[96551,99860],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The side (leaflet) of the mitochondrial inner membrane that faces the matrix.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_01249":null,"SJAG_01806":null,"SJAG_03282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099617","terms_by_termid":{"GO:0099616":null,"GO:0099617":null}}


id: PBO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, shugoshin Sgo2","termid":"PBO:0002191"}


id: GO:0075515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins when material is taken up into plasma membrane caveolae which then pinch off to form endocytic caveolar carriers containing the virus. The caveolar carriers then deliver their viral content to early endosomes, and the process ends when viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl","VZ:976"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via caveolin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075515)","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral entry into host cell via caveolin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075515"}


id: GO:0098705
data:
  {"annotated_genes":["SJAG_04246","SJAG_01493"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84082,110655],"is_not":false,"summary":null,"term":"GO:0098705"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane copper ion transport","termid":"GO:0015679"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01493":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"copper ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015678","GO:1902861"],"synonyms":[{"name":"copper cation import into cell","type":"exact"},{"name":"copper ion import into cell","type":"exact"},{"name":"high affinity copper ion transport","type":"narrow"},{"name":"high affinity copper transport","type":"narrow"},{"name":"high-affinity copper ion transport","type":"narrow"}],"termid":"GO:0098705","terms_by_termid":{"GO:0098705":null}}


id: PBO:0029613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_vegetative_cell","termid":"PBO:0029613"}


id: GO:1904941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA nucleotidylexotransferase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:23575307","GOC:bc","GOC:BHF_miRNA","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA nucleotidylexotransferase activity (obsolete GO:1904941)","synonyms":[{"name":"activation of DNA nucleotidylexotransferase activity","type":"narrow"},{"name":"activation of TdT","type":"related"},{"name":"activation of addase activity","type":"narrow"},{"name":"activation of deoxynucleotidyl terminal transferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic acid nucleotidyltransferase activity","type":"narrow"},{"name":"activation of deoxyribonucleic nucleotidyltransferase activity","type":"narrow"},{"name":"activation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"narrow"},{"name":"activation of terminal addition enzyme activity","type":"related"},{"name":"activation of terminal deoxynucleotide transferase activity","type":"narrow"},{"name":"activation of terminal deoxynucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal deoxyribonucleotidyltransferase activity","type":"narrow"},{"name":"activation of terminal transferase activity","type":"narrow"},{"name":"positive regulation of TdT","type":"related"},{"name":"positive regulation of addase activity","type":"exact"},{"name":"positive regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"positive regulation of terminal addition enzyme activity","type":"related"},{"name":"positive regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"positive regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"positive regulation of terminal transferase activity","type":"exact"},{"name":"up regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of TdT","type":"related"},{"name":"up regulation of addase activity","type":"exact"},{"name":"up regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up regulation of terminal addition enzyme activity","type":"related"},{"name":"up regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up regulation of terminal transferase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of TdT","type":"related"},{"name":"up-regulation of addase activity","type":"exact"},{"name":"up-regulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"up-regulation of terminal addition enzyme activity","type":"related"},{"name":"up-regulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"up-regulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"up-regulation of terminal transferase activity","type":"exact"},{"name":"upregulation of DNA nucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of TdT","type":"related"},{"name":"upregulation of addase activity","type":"exact"},{"name":"upregulation of deoxynucleotidyl terminal transferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic nucleotidyltransferase activity","type":"exact"},{"name":"upregulation of nucleoside-triphosphate:DNA deoxynucleotidylexotransferase activity","type":"exact"},{"name":"upregulation of terminal addition enzyme activity","type":"related"},{"name":"upregulation of terminal deoxynucleotide transferase activity","type":"exact"},{"name":"upregulation of terminal deoxynucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal deoxyribonucleotidyltransferase activity","type":"exact"},{"name":"upregulation of terminal transferase activity","type":"exact"}],"termid":"GO:1904941"}


id: GO:0120211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of the membrane of proacrosomal vesicle with the membrane of another proacrosomal vesicle to form the acrosome.","definition_xrefs":["GOC:krc","PMID:29991750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"acrosome assembly","termid":"GO:0001675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0008150","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"proacrosomal vesicle fusion","termid":"GO:0120211"}


id: PBO:0073791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 11","termid":"PBO:0073791"}


id: PBO:0056973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 27a","termid":"PBO:0056973"}


id: PBO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_methyltransferase_activity","termid":"PBO:0035712"}


id: PR:O42651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.11c","synonyms":[{"name":"Spom972h-atg17","type":"exact"}],"termid":"PR:O42651"}


id: GO:0060227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a precursor cell to a eye photoreceptor fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in camera-type eye photoreceptor fate commitment","synonyms":[{"name":"Notch signalling pathway involved in camera-type eye photoreceptor fate commitment","type":"exact"}],"termid":"GO:0060227"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: SO:1001264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoded_mRNA where translation was suspended at a particular codon and resumed at a particular non-overlapping downstream codon.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded_by_translational_bypass","termid":"SO:0000886"},{"relation_name":"is_a","term_name":"recoded_mRNA","termid":"SO:1001261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_recoded_by_translational_bypass","synonyms":[{"name":"mRNA recoded by translational bypass","type":"exact"}],"termid":"SO:1001264"}


id: GO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the hexose monosaccharide glucose into a cell as a result of an insulin stimulus.","definition_xrefs":["GOC:BHF","PMID:19079291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose import","termid":"GO:0046323"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glucose import in response to insulin stimulus","synonyms":[{"name":"cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:0044381"}


id: FYPO:0001773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a tRNA methyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished tRNA methyltransferase activity","synonyms":[{"name":"tRNA methyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0001773"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:kv","GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098772","GO:0005515","GO:0140677"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["GO:0071884"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: GO:0090378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a seed trichome irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"seed trichome differentiation","termid":"GO:0090376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed trichome elongation","termid":"GO:0090378"}


id: GO:0072128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the renal capsule are generated and organized. The renal capsule is the tough fibrous layer surrounding the kidney, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage. During development, it comprises a single layer of flattened cells that lie just above the cortical stroma and the condensed mesenchyme of the nephrogenic zone. It is in this region that the early stages of nephron induction and formation of new generations ureteric bud branches occur, as the kidney expands.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"renal capsule development","termid":"GO:0072127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal capsule morphogenesis","termid":"GO:0072128"}


id: PBO:0044426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 52, pseudogene","termid":"PBO:0044426"}


id: MOD:00079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-methyl-L-asparagine.","definition_xrefs":["PubMed:2356973","Unimod:34#N","OMSSA:75","PubMed:11875433","PubMed:3782095","RESID:AA0070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"},{"relation_name":"is_a","term_name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4-methyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-N4-methylbutanediamic acid","type":"exact"},{"name":"MOD_RES N4-methylasparagine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(gamma)-methylasparagine","type":"exact"},{"name":"N-methylasparagine","type":"exact"},{"name":"N4-methyl-L-asparagine","type":"exact"},{"name":"N4-methylated L-asparagine","type":"exact"},{"name":"N4Me1Asn","type":"exact"},{"name":"beta-aspartyl methylamide","type":"exact"},{"name":"beta-methylasparagine","type":"related"},{"name":"methyln","type":"exact"}],"termid":"MOD:00079"}


id: PBO:0044424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 43","termid":"PBO:0044424"}


id: GO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a neutrophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil extravasation","termid":"GO:0072672"}


id: GO:0031248
data:
  {"annotated_genes":["SJAG_01711","SJAG_00676","SJAG_00349","SJAG_06449","SJAG_03628","SJAG_04205","SJAG_02773","SJAG_03036","SJAG_01016","SJAG_02165","SJAG_04355","SJAG_00087","SJAG_03752","SJAG_02990","SJAG_03599","SJAG_04815","SJAG_03230","SJAG_04613","SJAG_01658","SJAG_04179","SJAG_03045","SJAG_00411","SJAG_04097","SJAG_03776","SJAG_00184","SJAG_02458","SJAG_02726","SJAG_00783","SJAG_04131","SJAG_02066","SJAG_02629","SJAG_02541","SJAG_01826","SJAG_00641","SJAG_04631","SJAG_01009","SJAG_00187","SJAG_02920","SJAG_04793","SJAG_05282","SJAG_03215","SJAG_04274","SJAG_03792","SJAG_03145","SJAG_03668","SJAG_03579","SJAG_01475","SJAG_02385","SJAG_02927","SJAG_01385","SJAG_00545","SJAG_00584"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[84567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[86868,101385,100519,95766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[112861,85520,106493,114027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[98658,111404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[99678,101564,108865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[102581,101386,104001,90057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[108313,90111,95767,100797,109223,95054,102951,111653,114603,105140,100131,93330,86806,90408,97782,97068,88470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[113660,112353,107823,110373,111443,84481,87513,99464,102975,103407,94604,85403,84630,101843,103765,108625,109053,113611,93923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[69861,62528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to a protein acceptor molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01826":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03045":null,"SJAG_03145":null,"SJAG_03215":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04631":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031248","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0043189":null,"GO:0046695":null,"GO:1990467":null}}


id: PBO:0085213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform; shares redundant functions with Yck1p in morphogenesis, proper septin assembly, endocytic trafficking, and glucose sensing; stabilized by Sod1p binding in the presence of glucose and oxygen, causing glucose repression of respiratory metabolism; involved in the phosphorylation and regulation of glucose sensor Rgt2p; YCK2 has a paralog, YCK1, that arose from the whole genome duplication","termid":"PBO:0085213"}


id: PBO:0028817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_single-stranded_DNA_5'-3'_exodeoxyribonuclease_activity","termid":"PBO:0028817"}


id: PBO:0065534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 1","termid":"PBO:0065534"}


id: PR:G2TRT6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC417.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.16","synonyms":[{"name":"Spom972h-SPCC417.16","type":"exact"}],"termid":"PR:G2TRT6"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95629],"is_not":false,"summary":null,"term":"GO:0007266"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null}}


id: PBO:0085471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-ribosomal factor involved in 60S ribosomal protein subunit export; associates with the pre-60S particle; shuttles between the nucleus and cytoplasm","termid":"PBO:0085471"}


id: GO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + UDP-alpha-D-xylose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-[beta-D-xylosyl-(1->2)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + H+ + UDP.","definition_xrefs":["EC:2.4.2.38","RHEA:10612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glycoprotein 2-beta-D-xylosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06016","MetaCyc:2.4.2.38-RXN"],"synonyms":[{"name":"1,2-beta-xylosyltransferase activity","type":"related"},{"name":"beta-1,2-xylosyltransferase activity","type":"related"},{"name":"glycoprotein 2-b-D-xylosyltransferase activity","type":"exact"}],"termid":"GO:0050513"}


id: PBO:0049657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 11","termid":"PBO:0049657"}


id: PR:O74332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.12c","synonyms":[{"name":"Spom972h-SPBC1685.12c","type":"exact"}],"termid":"PR:O74332"}


id: PBO:0078434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-4","termid":"PBO:0078434"}


id: PBO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 4, pseudogene","termid":"PBO:0050654"}


id: PBO:0039027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 3","termid":"PBO:0039027"}


id: GO:0034362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triglyceride and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:expert_pt","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"low-density lipoprotein particle","synonyms":[{"name":"LDL complex","type":"exact"},{"name":"LDL particle","type":"exact"},{"name":"low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034362"}


id: PBO:0027545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_motility","termid":"PBO:0027545"}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: PBO:0080372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 1","termid":"PBO:0080372"}


id: PR:G2TRT4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain-containing new25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.21","synonyms":[{"name":"Spom972h-new25","type":"exact"}],"termid":"PR:G2TRT4"}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: PBO:0080327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 91 pseudogene","termid":"PBO:0080327"}


id: FYPO:0006975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"RNA absent from cell during meiotic cell cycle","synonyms":[{"name":"transcripts absent from cell during meiotic cell cycle","type":"exact"},{"name":"undetectable cellular RNA level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006975"}


id: FYPO:0003472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is subject to salt stress. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to salt stress (obsolete FYPO:0003472)","synonyms":[{"name":"cut during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003472"}


id: PBO:0064092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITPNM family member 3","termid":"PBO:0064092"}


id: PBO:0084766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NADH-cytochrome b5 reductase; involved in ergosterol biosynthesis","termid":"PBO:0084766"}


id: GO:1900649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"regulation of dehydroaustinol anabolism","type":"exact"},{"name":"regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"regulation of dehydroaustinol formation","type":"exact"},{"name":"regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900649"}


id: GO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine + H+.","definition_xrefs":["RHEA:10656","EC:2.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01883","MetaCyc:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"GA methylpherase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate transmethylase activity","type":"related"},{"name":"guanidoacetate methyltransferase activity","type":"related"},{"name":"methionine-guanidinoacetic transmethylase activity","type":"related"}],"termid":"GO:0030731"}


id: PR:000027556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated form in which the phosphorylation occurs at the Ser or Thr residue within the LLPKx[ST] motif by the mitotic checkpoint serine/threonine-protein kinase BUB1. Example: UniProtKB:P04910, Ser-122, MOD:00046.","definition_xrefs":["PMID:19965387","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2 phosphorylated form","termid":"PR:000027552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated 2","synonyms":[{"name":"HTA2/Phos:2","type":"exact"}],"termid":"PR:000027556"}


id: PBO:0055077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2494","termid":"PBO:0055077"}


id: GO:0015778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hexuronide across a membrane. Hexuronides are any compound formed by combination of glycosidic linkage of a hydroxy compound (e.g. an alcohol or a saccharide) with the anomeric carbon atom of a hexuronate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hexuronide transmembrane transport","synonyms":[{"name":"hexuronide transport","type":"broad"}],"termid":"GO:0015778"}


id: GO:0099625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of a ventricular cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: PBO:0069971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1266, pseudogene","termid":"PBO:0069971"}


id: FYPO:0005431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PomBase:mah","PMID:12019258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased mitotic recombination at hotspot","synonyms":[{"name":"decreased mitotic recombination at hotspot during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination at hotspot during vegetative growth","type":"exact"},{"name":"decreased mitotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased mitotic recombination","type":"exact"},{"name":"reduced mitotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005431"}


id: GO:1901643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of tRNA methylation in response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tRNA methylation in response to nitrogen starvation (obsolete GO:1901643)","termid":"GO:1901643"}


id: GO:0019726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NADP+ = H+ + mevaldate + NADPH.","definition_xrefs":["RHEA:20193","EC:1.1.1.33"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADPH) activity (obsolete GO:0019726)","synonyms":[{"name":"(R)-mevalonate:NADP+ oxidoreductase","type":"related"},{"name":"mevaldate (reduced nicotinamide adenine dinucleotide phosphate) reductase","type":"related"}],"termid":"GO:0019726"}


id: MOD:01326
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 9x(13)C labeled L-tyrosine.","definition_xrefs":["PubMed:11510821","PubMed:12716131","Unimod:184#Y","PubMed:12422359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-tyrosine","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:01326"}


id: PBO:0091746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b translation regulator Cbp7","termid":"PBO:0091746"}


id: PBO:0041054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 5","termid":"PBO:0041054"}


id: GO:0015464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an acetylcholine receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activity","termid":"GO:0015464"}


id: PBO:0053943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1246","termid":"PBO:0053943"}


id: PBO:0027628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposable_element-derived_small_RNA_level","termid":"PBO:0027628"}


id: GO:1903501
data:
  {"annotated_genes":["SJAG_00082","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86120,90517],"is_not":false,"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:al","GOC:vw","PMID:18256290","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring assembly","termid":"GO:1903499"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000433"},{"relation_name":"positively_regulates","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0030036","GO:0007049","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"narrow"},{"name":"activation of contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"activation of mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"positive regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"positive regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"positive regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"up regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"up regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"up-regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"up-regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"up-regulation of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"upregulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"upregulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"upregulation of mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903501","terms_by_termid":{"GO:1903501":null}}


id: PBO:0061743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 2","termid":"PBO:0061743"}


id: GO:0033784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + senecionine = H2O + NADP+ + senecionine N-oxide.","definition_xrefs":["EC:1.14.13.101","RHEA:11420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"senecionine N-oxygenase activity","secondary_identifiers":["KEGG_REACTION:R07373","MetaCyc:1.14.13.101-RXN"],"synonyms":[{"name":"SNO","type":"related"},{"name":"senecionine monooxygenase (N-oxide-forming) activity","type":"related"},{"name":"senecionine,NADPH:oxygen oxidoreductase (N-oxide-forming) activity","type":"related"}],"termid":"GO:0033784"}


id: PR:O94293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.08 gene.","definition_xrefs":["UniProtKB:O94293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.08","synonyms":[{"name":"Spom972h-SPBC887.08","type":"exact"}],"termid":"PR:O94293"}


id: GO:0035474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The segregation of angioblasts into discrete arterial and venous vessels from one common precursor vessel.","definition_xrefs":["GOC:dgh","PMID:19815777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selective angioblast sprouting","termid":"GO:0035474"}


id: PBO:0051258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-44 (pseudogene)","termid":"PBO:0051258"}


id: PBO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 3","termid":"PBO:0046189"}


id: PBO:0086348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN homolog with no demonstrated inositol lipid phosphatase activity; plays a role in normal sporulation; homolog of human tumor suppressor gene PTEN/MMAC1/TEP1 and fission yeast ptn1","termid":"PBO:0086348"}


id: GO:0019857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5-methylcytosine, a methylated base of DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-methylcytosine metabolic process","synonyms":[{"name":"5-methylcytosine metabolism","type":"exact"}],"termid":"GO:0019857"}


id: PBO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLT3 interacting zinc finger 1","termid":"PBO:0047634"}


id: PR:Q9UST6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein spc24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.08","synonyms":[{"name":"Spom972h-spc24","type":"exact"}],"termid":"PR:Q9UST6"}


id: PBO:0036160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036160"}


id: MOD:01173
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N-asparaginyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["RESID:AA0425","PubMed:12626404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIAsn","type":"exact"},{"name":"LIPID GPI-like-anchor amidated asparagine","type":"exact"},{"name":"N-asparaginyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:01173"}


id: GO:0075248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aeciospore formation","termid":"GO:0075248"}


id: GO:0018853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perillic acid + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + perillyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0731"],"gene_count":0,"genotype_count":0,"name":"obsolete perillyl-CoA synthetase activity (obsolete GO:0018853)","secondary_identifiers":["EC:6.2.1.-"],"synonyms":[{"name":"perillyl-CoA synthetase activity","type":"exact"}],"termid":"GO:0018853"}


id: PBO:0088279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family deubiquitinase/desumoylase Sdu1","termid":"PBO:0088279"}


id: PBO:0040551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4","termid":"PBO:0040551"}


id: PBO:0083108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase I found in nucleus and mitochondria; essential enzyme that joins Okazaki fragments during DNA replication; also acts in ribonucleotide excision repair, base excision repair, and recombination; DNA ligase I mutants trigger ubiquitination of PCNA at K107, facilitating Rad59p-mediated bypass of unligated Okazaki fragments; human homolog LIG1 can complement yeast cdc9 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0083108"}


id: PBO:0002957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0002957"}


id: GO:0015819
data:
  {"annotated_genes":["SJAG_02029","SJAG_04725","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99936,98898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[106101,99937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"},{"relation_name":"is_a","term_name":"L-lysine transport","termid":"GO:1902022"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lysine transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034226","GO:0061461"],"synonyms":[{"name":"L-lysine import","type":"narrow"},{"name":"L-lysine transport","type":"related"},{"name":"lysine import","type":"narrow"},{"name":"lysine uptake","type":"narrow"}],"termid":"GO:0015819","terms_by_termid":{"GO:0090517":null,"GO:1901482":null}}


id: GO:1904066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["GO_REF:0000060","GOC:kmv","PMID:22665789","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in dauer larval development","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signaling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1904066"}


id: PBO:0068649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 30, pseudogene","termid":"PBO:0068649"}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: PBO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B delta subunit (predicted)","termid":"PBO:0002439"}


id: PBO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucokinase regulator","termid":"PBO:0048464"}


id: GO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"acetylcholine secretion","termid":"GO:0061526"}


id: GO:0035004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol = ADP + a phosphatidylinositol 3-phosphate. This reaction is the addition of a phosphate group to phosphatidylinositol or one of its phosphorylated derivatives at the 3' position of the inositol ring.","definition_xrefs":["PMID:9255069","GOC:bf","PMID:10209156"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity (obsolete GO:0035004)","synonyms":[{"name":"phosphoinositide 3-kinase activity","type":"exact"}],"termid":"GO:0035004"}


id: PR:O59704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12747:SF0","PRO:DNx","OMA:SCHPO02614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.07","secondary_identifiers":["UniProtKB:O59704"],"synonyms":[{"name":"Spom972h-IKBKAP","type":"exact"},{"name":"protein iki3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59704"}


id: PBO:0028787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028787"}


id: PBO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex STAG protein Rec11","termid":"PBO:0090291"}


id: MOD:00009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that removes a residue, or inserts or replaces a residue with a natural, standard or nonstandard, encoded residue.","definition_xrefs":["RESID:AA0000","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural residue","synonyms":[{"name":"Res","type":"exact"},{"name":"alpha-amino acid","type":"exact"}],"termid":"MOD:00009"}


id: GO:0019959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-8.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-X-C chemokine binding","termid":"GO:0019958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-8 binding","synonyms":[{"name":"IL-8 binding","type":"exact"}],"termid":"GO:0019959"}


id: PBO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.3","termid":"PBO:0005340"}


id: PR:Q6MX60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.02 gene.","definition_xrefs":["UniProtKB:Q6MX60","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.02","synonyms":[{"name":"Spom972h-SPBCPT2R1.02","type":"exact"}],"termid":"PR:Q6MX60"}


id: PBO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2b","termid":"PBO:0051893"}


id: PBO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription","termid":"PBO:0007535"}


id: PBO:0080838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 2","termid":"PBO:0080838"}


id: PBO:0049770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 8","termid":"PBO:0049770"}


id: PBO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR51b (predicted)","termid":"PBO:0000835"}


id: PBO:0049576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 4, pseudogene","termid":"PBO:0049576"}


id: PBO:0052884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-7","termid":"PBO:0052884"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: FYPO:0005168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to salt stress","synonyms":[{"name":"normal protein accumulation during cellular response to salt stress","type":"related"},{"name":"normal protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005168"}


id: GO:0035804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg coat. An egg coat is a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:16944418","PMID:17163408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of egg coat","synonyms":[{"name":"structural constituent of vitelline envelope","type":"narrow"},{"name":"structural constituent of zona pellucida","type":"narrow"}],"termid":"GO:0035804"}


id: GO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that sets the alignment of mitotic spindle relative to other cellular structures and contributes to oriented chondrocyte division in the growth plate.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of mitotic spindle orientation","termid":"GO:0000132"},{"relation_name":"is_a","term_name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in establishment of planar polarity","termid":"GO:0090176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150","GO:0000226","GO:0051179","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle orientation involved in growth plate cartilage chondrocyte division","termid":"GO:0003425"}


id: PR:P0CH06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi1 gene.","definition_xrefs":["PRO:DAN","UniProtKB:P0CH06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.04","synonyms":[{"name":"SPAC11G7.04","type":"related"},{"name":"Spom972h-ubi1","type":"exact"}],"termid":"PR:P0CH06"}


id: PBO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucan synthase Ags1","termid":"PBO:0015268"}


id: GO:0097129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D2-CDK4 complex","termid":"GO:0097129"}


id: MOD:01683
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-lysine residue with one methyl group.","definition_xrefs":["OMSSA:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated lysine","termid":"MOD:00663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-lysine","synonyms":[{"name":"Me1Lys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylk","type":"exact"}],"termid":"MOD:01683"}


id: PBO:0065879
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30, member RAS oncogene family","termid":"PBO:0065879"}


id: PBO:0075266
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 19","termid":"PBO:0075266"}


id: PBO:0061505
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: PBO:0063966
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0009150
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id: SO:0000041
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operation that can be applied to a sequence, that results in a change.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000041 sequence_operation (obsolete SO:0000041)","synonyms":[{"name":"sequence operation","type":"exact"}],"termid":"SO:0000041"}


id: SO:0000610
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence of about 100 nucleotides of A added to the 3' end of most eukaryotic mRNAs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyA_sequence","synonyms":[{"name":"polyA sequence","type":"exact"}],"termid":"SO:0000610"}


id: PBO:0079709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 3","termid":"PBO:0079709"}


id: PBO:0027250
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dimethyl_sulfoxide","termid":"PBO:0027250"}


id: PBO:0078300
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-5","termid":"PBO:0078300"}


id: GO:0004320
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oleoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0004320)","synonyms":[{"name":"oleoyl-ACP hydrolase activity","type":"exact"},{"name":"oleoyl-ACP thioesterase activity","type":"related"},{"name":"oleoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"oleoyl-acyl carrier protein thioesterase activity","type":"related"},{"name":"oleoyl-acyl-carrier-protein hydrolase","type":"broad"}],"termid":"GO:0004320"}


id: PATO:0001409
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's resembling a long tapered rod.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle-shaped","termid":"PATO:0001409"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: GO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of germ tube formation on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of germ tube formation","termid":"GO:0075010"},{"relation_name":"negatively_regulates","term_name":"germ tube formation","termid":"GO:0075009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germ tube formation","synonyms":[{"name":"negative regulation of germ tube formation on or near host","type":"exact"}],"termid":"GO:0075012"}


id: MOD:01006
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two bromine atoms.","definition_xrefs":["Unimod:534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dibrominated tyrosine","synonyms":[{"name":"Br2Tyr","type":"exact"},{"name":"Dibromo","type":"related"}],"termid":"MOD:01006"}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: GO:0055065
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id: GO:0035076
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id: GO:0006357
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id: FYPO:0007432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which transversion mutations occur at a lower frequency than normal.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mutation rate","termid":"FYPO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased transversion frequency","termid":"FYPO:0007432"}


id: GO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"transcription corepressor binding","secondary_identifiers":["GO:0001226"],"synonyms":[{"name":"RNA polymerase II transcription corepressor binding","type":"related"}],"termid":"GO:0001222"}


id: PBO:0091684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam2","termid":"PBO:0091684"}


id: PBO:0058504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5694","termid":"PBO:0058504"}


id: PBO:0080341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 105 pseudogene","termid":"PBO:0080341"}


id: PBO:0017840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent 3' to 5' DNA helicase Ino80","termid":"PBO:0017840"}


id: FYPO:0007950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen stress.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased mating efficency during nitrogen stress","termid":"FYPO:0007950"}


id: PBO:0005303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated protein Prp28 (predicted)","termid":"PBO:0005303"}


id: PBO:0069792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1078, pseudogene","termid":"PBO:0069792"}


id: GO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinin cascade","termid":"GO:0002256"},{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"negatively_regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kinin cascade","synonyms":[{"name":"down regulation of kinin cascade","type":"exact"},{"name":"down-regulation of kinin cascade","type":"exact"},{"name":"downregulation of kinin cascade","type":"exact"},{"name":"inhibition of kinin cascade","type":"narrow"}],"termid":"GO:0002257"}


id: PBO:0079717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 4","termid":"PBO:0079717"}


id: PBO:0079255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 27","termid":"PBO:0079255"}


id: PBO:0058153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4448","termid":"PBO:0058153"}


id: GO:0006794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary phosphorus source and then activates genes to scavenge the last traces of the primary phosphorus source and to transport and metabolize alternative phosphorus sources. The utilization process begins when the cell or organism detects phosphorus levels, includes the phosphorus-containing substances, and ends when phosphorus is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphorus utilization","termid":"GO:0006794"}


id: GO:0150016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any dendrite in a dendritic tree that emerges near the basal pole of a neuron (e.g. in bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon), and which is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:22683681","GOC:aruk","PMID:20629984","PMID:17046728","PMID:9214543","PMID:1720142","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal dendrite","termid":"GO:0097441"},{"relation_name":"is_a","term_name":"distal dendrite","termid":"GO:0150002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal distal dendrite","termid":"GO:0150016"}


id: PBO:0049305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5 pseudogene 1","termid":"PBO:0049305"}


id: GO:0018661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + orcinol = 2,3,5-trihydroxytoluene + H2O + NAD+.","definition_xrefs":["EC:1.14.13.6","RHEA:19601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"orcinol 2-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0092","KEGG_REACTION:R02830","MetaCyc:ORCINOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"orcinol hydroxylase activity","type":"exact"},{"name":"orcinol,NADH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018661"}


id: PBO:0055073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2490","termid":"PBO:0055073"}


id: PBO:0055964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 77, pseudogene","termid":"PBO:0055964"}


id: GO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that in humans consists of beta5, zeta, mu5 and sigma5 subunits and is found associated with membranes in the endosomes; it is not clear whether AP-5 forms clathrin coats in vivo.","definition_xrefs":["PMID:22022230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AP-5 adaptor complex","synonyms":[{"name":"adaptor protein-5 adaptor complex","type":"exact"}],"termid":"GO:0044599"}


id: PBO:0026665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glucose-repressed_gene_mRNA_during_vegetative_growth","termid":"PBO:0026665"}


id: PBO:0073399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 2","termid":"PBO:0073399"}


id: PBO:0040666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBX high mobility group box domain containing","termid":"PBO:0040666"}


id: GO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-NFAT signaling cascade","termid":"GO:0070884"},{"relation_name":"is_a","term_name":"negative regulation of calcineurin-mediated signaling","termid":"GO:0106057"},{"relation_name":"negatively_regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051534"],"synonyms":[{"name":"down regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"down-regulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"downregulation of calcineurin-NFAT signaling cascade","type":"exact"},{"name":"inhibition of NFAT protein import into nucleus","type":"narrow"},{"name":"inhibition of calcineurin-NFAT signaling cascade","type":"narrow"},{"name":"negative regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"negative regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"negative regulation of calcineurin-NFAT signalling cascade","type":"exact"},{"name":"termination of calcineurin-NFAT signaling cascade","type":"narrow"}],"termid":"GO:0070885"}


id: PBO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Mam33 (predicted)","termid":"PBO:0018019"}


id: PBO:0031580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_septation","termid":"PBO:0031580"}


id: GO:0141055
data:
  {"annotated_genes":["SJAG_00341"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H3 substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0019787","GO:0004842","GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H3 ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141055","terms_by_termid":{"GO:0140851":null}}


id: PBO:0029134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell","termid":"PBO:0029134"}


id: PBO:0063109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 2","termid":"PBO:0063109"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:bc","PMID:25490267","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: GO:1900584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of o-orsellinic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"o-orsellinic acid metabolic process","termid":"GO:1900582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"o-orsellinic acid biosynthetic process","synonyms":[{"name":"o-orsellinic acid anabolism","type":"exact"},{"name":"o-orsellinic acid biosynthesis","type":"exact"},{"name":"o-orsellinic acid formation","type":"exact"},{"name":"o-orsellinic acid synthesis","type":"exact"}],"termid":"GO:1900584"}


id: GO:0007086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process that results in the joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the nucleus, and contributes to mitotic nuclear envelope reassembly.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane fusion","termid":"GO:0000740"},{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0007049","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"vesicle fusion with nuclear membrane involved in mitotic nuclear envelope reassembly","termid":"GO:0007086"}


id: PBO:0028109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028109"}


id: PBO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Cdc45","termid":"PBO:0002655"}


id: PBO:0051588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 20","termid":"PBO:0051588"}


id: GO:0047678
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + O2 = 4-guanidinobutanamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.1","RHEA:10548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arginine 2-monooxygenase activity","secondary_identifiers":["MetaCyc:ARGININE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00559"],"synonyms":[{"name":"L-arginine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"arginine decarboxy-oxidase activity","type":"related"},{"name":"arginine monooxygenase activity","type":"related"},{"name":"arginine oxygenase (decarboxylating) activity","type":"related"}],"termid":"GO:0047678"}


id: PBO:0017574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box subunit Nht1","termid":"PBO:0017574"}


id: PBO:0069892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1181, pseudogene","termid":"PBO:0069892"}


id: PBO:0068028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 333","termid":"PBO:0068028"}


id: MOD:01378
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4R)-4,5-dihydroxyisoleucine.","definition_xrefs":["ChEBI:141826","PubMed:363352","PubMed:11805306","PubMed:18552824","RESID:AA0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated isoleucine","termid":"MOD:01416"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4R)-4,5-dihydroxyisoleucine","synonyms":[{"name":"(2S,3R,4R)-2-amino-4,5-dihydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"(3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4R)-4,5-dihydroxyisoleucine","type":"exact"},{"name":"gamma,delta-dihydroxyisoleucine","type":"exact"}],"termid":"MOD:01378"}


id: PBO:0090034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, ribosome associated Sks2","termid":"PBO:0090034"}


id: SO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002057 intronic_splicing_enhancer (obsolete SO:0002057)","synonyms":[{"name":"ISE","type":"exact"}],"termid":"SO:0002057"}


id: PBO:0045468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5","termid":"PBO:0045468"}


id: PBO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_assembly","termid":"PBO:0031269"}


id: GO:1905197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocannabinoid signaling pathway that is involved in retrograde trans-synaptic signaling by endocannabinoid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:23040807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocannabinoid signaling pathway involved in trans-synaptic signaling","termid":"GO:1905129"},{"relation_name":"part_of","term_name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endocannabinoid signaling pathway involved in retrograde trans-synaptic signaling","synonyms":[{"name":"endocannabinoid signalling pathway involved in retrograde trans-synaptic signaling by endocannabinoid","type":"exact"}],"termid":"GO:1905197"}


id: FYPO:0000187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is abnormal. Small RNA-mediated heterochromatin assembly results in transcriptional silencing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"},{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly","termid":"FYPO:0003044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal heterochromatin assembly by small RNA","synonyms":[{"name":"abnormal RNAi-mediated chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing by small RNA","type":"exact"},{"name":"abnormal heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly by small RNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000187"}


id: FYPO:0006645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during metaphase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during metaphase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006645"}


id: PBO:0029046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_import","termid":"PBO:0029046"}


id: PR:O14140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome complex subunit DSS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16771:SF0","OMA:SCHPO02235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor dss1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.02","secondary_identifiers":["UniProtKB:O14140"],"synonyms":[{"name":"Spom972h-SHFM1","type":"exact"}],"termid":"PR:O14140"}


id: GO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A nonsteroidal regulator, composed of two covalently linked beta subunits, that is synthesized in the pituitary gland and gonads and stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete activin (obsolete GO:0016915)","synonyms":[{"name":"activin","type":"exact"}],"termid":"GO:0016915"}


id: PBO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neurone disease","termid":"PBO:0000613"}


id: PR:Q10207
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D1.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D1.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.01","synonyms":[{"name":"Spom972h-SPBC17D1.01","type":"exact"}],"termid":"PR:Q10207"}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: PBO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1B","termid":"PBO:0044639"}


id: GO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger (called a death ligand), and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic or necrotic cell death.","definition_xrefs":["GOC:BHF","PMID:10209153","GOC:ecd","GOC:mtg_apoptosis","GOC:bf","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"death receptor activity","synonyms":[{"name":"apoptosis-activating receptor activity","type":"related"}],"termid":"GO:0005035"}


id: PBO:0083397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORFs YPR169W-A and YPR170W-B","termid":"PBO:0083397"}


id: PBO:0071464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 5","termid":"PBO:0071464"}


id: FYPO:0007508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17434129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007508"}


id: PBO:0077783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I pseudogene 1","termid":"PBO:0077783"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of signal transduction in another organism","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: GO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid 2-O-glucoside + UDP.","definition_xrefs":["MetaCyc:RXN-11658","RHEA:62312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (glucoside-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052640"}


id: PBO:0087931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transketolase; catalyzes conversion of xylulose-5-phosphate and ribose-5-phosphate to sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate in the pentose phosphate pathway; needed for synthesis of aromatic amino acids; TKL1 has a paralog, TKL2, that arose from the whole genome duplication","termid":"PBO:0087931"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: GO:0032810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism.","definition_xrefs":["GOC:vk","PMID:11994399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"sterol response element binding","synonyms":[{"name":"SRE binding","type":"exact"}],"termid":"GO:0032810"}


id: PBO:0052961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 1","termid":"PBO:0052961"}


id: FYPO:0005869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus and more than one septum, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"inviable stubby septated vegetative cell","termid":"FYPO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"inviable stubby multiseptate vegetative cell","synonyms":[{"name":"inviable stubby multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable stubby multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped multiseptate vegetative cell","type":"exact"},{"name":"lethal; stubby multiseptate vegetative cell","type":"exact"},{"name":"stubby multiseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0005869"}


id: PBO:0110373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPA3 pseudogene 17","termid":"PBO:0110373"}


id: GO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an inwardly rectifying potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"inward rectifier potassium channel inhibitor activity","termid":"GO:0070320"}


id: MOD:01578
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01578"}


id: PBO:0073020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCOC antisense RNA 1","termid":"PBO:0073020"}


id: GO:0004568
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97608],"is_not":false,"summary":null,"term":"GO:0004568"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.","definition_xrefs":["GOC:pde","GOC:kah","EC:3.2.1.14","GOC:bf","PMID:11468293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"chitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786421","MetaCyc:3.2.1.14-RXN"],"synonyms":[{"name":"1,4-beta-poly-N-acetylglucosaminidase activity","type":"related"},{"name":"beta-1,4-poly-N-acetyl glucosamidinase activity","type":"related"},{"name":"chitodextrinase activity","type":"related"},{"name":"poly-beta-glucosaminidase activity","type":"related"},{"name":"poly[1,4-(N-acetyl-beta-D-glucosaminide)] glycanohydrolase activity","type":"related"}],"termid":"GO:0004568","terms_by_termid":{"GO:0004568":null}}


id: PBO:0053540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 544","termid":"PBO:0053540"}


id: PBO:0082711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitochondrial TIM22 complex; involved in insertion of polytopic proteins into the inner membrane","termid":"PBO:0082711"}


id: PATO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000281 cytoplasmic sterility (obsolete PATO:0000281)","termid":"PATO:0000281"}


id: RO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","termid":"RO:0002231"}


id: PBO:0034439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0034439"}


id: GO:1905191
data:
  {"annotated_genes":["SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91264],"is_not":false,"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiosis II.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902104"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis II","termid":"GO:1905189"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiosis II","termid":"GO:1990950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiosis II metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905191","terms_by_termid":{"GO:1905191":null}}


id: GO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glucuronylation of the N-terminal glycine of proteins to form the derivative D-glucuronyl-N-glycine.","definition_xrefs":["RESID:AA0058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid glucuronylation","termid":"GO:0018006"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-glucuronylation","termid":"GO:0018007"}


id: PBO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rhp42","termid":"PBO:0005138"}


id: PR:O42875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tryptophan--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01319","PRO:DNx","PANTHER:PTHR10055:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.13c","secondary_identifiers":["UniProtKB:O42875"],"synonyms":[{"name":"Spom972h-WARS2","type":"exact"},{"name":"TrpRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tryptophanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42875"}


id: PATO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000799 muscle elevation value (obsolete PATO:0000799)","termid":"PATO:0000799"}


id: GO:0098910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"is_a","term_name":"regulation of cardiac conduction","termid":"GO:1903779"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"}


id: PBO:0057559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 708","termid":"PBO:0057559"}


id: PBO:0030058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_minichromosome_loss","termid":"PBO:0030058"}


id: PBO:0064183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XJ, pseudogene","termid":"PBO:0064183"}


id: GO:1902818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethyl acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:16013377","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethyl acetate metabolic process","synonyms":[{"name":"ethyl acetate metabolism","type":"exact"},{"name":"ethyl ethanoate metabolic process","type":"exact"}],"termid":"GO:1902818"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["UniProtKB:O74913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: PBO:0088361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Utp23","termid":"PBO:0088361"}


id: GO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of BMP signaling pathway","secondary_identifiers":["GO:0090097"],"synonyms":[{"name":"regulation of BMP receptor signaling pathway","type":"related"},{"name":"regulation of BMP signalling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030510"}


id: PBO:0005240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase (predicted)","termid":"PBO:0005240"}


id: PBO:0053539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 543","termid":"PBO:0053539"}


id: GO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions.","definition_xrefs":["PMID:14531730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"WW domain binding","termid":"GO:0050699"}


id: PR:Q9C1X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase organizer 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02622","PANTHER:PTHR22842:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C713.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.05","secondary_identifiers":["UniProtKB:Q9C1X0"],"synonyms":[{"name":"Spom972h-WDR83","type":"exact"}],"termid":"PR:Q9C1X0"}


id: PBO:0084481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Medium chain fatty acyl-CoA synthetase; activates imported fatty acids; accepts a wide range of fatty acid chain lengths with a preference for medium chains, C9:0-C13:0; localized to the peroxisome; comparative analysis suggests that a mitochondrially targeted form may result from translation starting at a non-canonical codon upstream of the annotated start codon","termid":"PBO:0084481"}


id: FYPO:0001515
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[115478,115477,115479,115481],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"},{"relation_name":"is_a","term_name":"abnormal heterochromatin tethering at nuclear periphery","termid":"FYPO:0007768"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal telomere tethering at nuclear periphery during vegetative growth","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892","SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","vps4delta","man1delta"],"synonyms":[{"name":"abnormal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere anchoring at nuclear periphery during vegetative growth","type":"exact"},{"name":"abnormal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"abnormal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0001515","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0077748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll interacting protein","termid":"PBO:0077748"}


id: PR:O74690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snu13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"13 kDa ribonucleoprotein-associated protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.03c","synonyms":[{"name":"Spom972h-snu13","type":"exact"}],"termid":"PR:O74690"}


id: FYPO:0005672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during mitotic M phase","type":"related"},{"name":"decreased protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus during mitosis","type":"exact"}],"termid":"FYPO:0005672"}


id: PBO:0084936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mu1-like medium subunit of the AP-1 complex; binds clathrin; involved in clathrin-dependent Golgi protein sorting; the AP-1 complex is the clathrin-associated protein complex","termid":"PBO:0084936"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_04640","SJAG_02370","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88646,101656],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225544","PMID:15225542","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: GO:0033912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (2->6)-beta-D-fructofuranan, to remove successive disaccharide residues as levanbiose, i.e. 6-(beta-D-fructofuranosyl)-D-fructose, from the end of the chain.","definition_xrefs":["EC:3.2.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,6-beta-fructan 6-levanbiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.64-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan 6-beta-D-fructofuranosylfructohydrolase activity","type":"related"},{"name":"2,6-beta-D-fructan 6-levanbiohydrolase activity","type":"related"},{"name":"2,6-beta-D-fructofuranan 6-(beta-D-fructosyl)-D-fructose-hydrolase activity","type":"related"},{"name":"beta-2,6-fructan-6-levanbiohydrolase activity","type":"related"},{"name":"levanbiose-producing levanase activity","type":"related"}],"termid":"GO:0033912"}


id: GO:0018942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organometals, any metal-containing organic compound, especially one in which the metal atom is linked directly to one of more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organometal metabolic process","synonyms":[{"name":"organometal metabolism","type":"exact"}],"termid":"GO:0018942"}


id: PBO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300c molecule","termid":"PBO:0042386"}


id: PR:O42925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.01c","synonyms":[{"name":"Spom972h-SPBC16C6.01c","type":"exact"}],"termid":"PR:O42925"}


id: GO:0070401
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94267],"is_not":false,"summary":null,"term":"GO:0070401"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, NADP+, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NADP binding","termid":"GO:0050661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADP+ binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (oxidized) binding","type":"exact"},{"name":"NADP binding","type":"related"},{"name":"oxidized NADP binding","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0070401","terms_by_termid":{"GO:0070401":null}}


id: PBO:0045439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L3 divergent transcript","termid":"PBO:0045439"}


id: GO:0034541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylarsenous acid + R2S-CH3 = trimethylarsine oxide + R2SH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylarsinite methyltransferase activity (obsolete GO:0034541)","termid":"GO:0034541"}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: GO:0014806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hyperplasia","termid":"GO:0014806"}


id: PBO:0068192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 499","termid":"PBO:0068192"}


id: PBO:0003453
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.15","termid":"PBO:0003453"}


id: PBO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshifted","termid":"PBO:0000108"}


id: GO:0034264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the cytokinin 6-isopentenyladenine.","definition_xrefs":["PMID:18216168","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenyl adenine metabolic process","synonyms":[{"name":"isopentenyl adenine metabolism","type":"exact"},{"name":"isopentenyladenine metabolic process","type":"exact"}],"termid":"GO:0034264"}


id: PBO:0051225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-1-1 (pseudogene)","termid":"PBO:0051225"}


id: GO:0044337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of apoptotic process.","definition_xrefs":["GOC:jl","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"},{"relation_name":"part_of","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"canonical Wnt signaling pathway involved in positive regulation of apoptotic process","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptosis","type":"narrow"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of apoptotic process","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of apoptosis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of apoptotic process","type":"exact"}],"termid":"GO:0044337"}


id: GO:2000513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granzyme A production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme A production","termid":"GO:2000511"},{"relation_name":"positively_regulates","term_name":"granzyme A production","termid":"GO:0035746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of granzyme A production","termid":"GO:2000513"}


id: GO:0008486
data:
  {"annotated_genes":["SJAG_01154","SJAG_00244","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84858],"is_not":false,"summary":null,"term":"GO:0008486"},{"annotations":[111125,101273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[101274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"},{"annotations":[111126,101275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[101276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"},{"annotations":[101277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106211"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol polyphosphate + H2O = 1D-myo-inositol polyphosphate + phosphate.","definition_xrefs":["EC:3.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"diphosphoinositol-polyphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.6.1.52-RXN","KEGG_REACTION:R05777"],"synonyms":[{"name":"DIPP activity","type":"related"},{"name":"diphospho-myo-inositol-polyphosphate diphosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol polyphosphate phosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol-polyphosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0008486","terms_by_termid":{"GO:0008486":null,"GO:0052843":null,"GO:0052845":null,"GO:0052846":null,"GO:0052847":null,"GO:0106211":null}}


id: RO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in","termid":"RO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"role_of","termid":"RO:0000081"}


id: GO:0004035
data:
  {"annotated_genes":["SJAG_03108","SJAG_02853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99535,99721],"is_not":false,"summary":null,"term":"GO:0004035"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphate monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["EC:3.1.3.1","RHEA:15017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02853":null,"SJAG_03108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkaline phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALKAPHOSPHA-RXN","Reactome:R-HSA-8878787"],"synonyms":[{"name":"alkaline phenyl phosphatase activity","type":"related"},{"name":"alkaline phosphohydrolase activity","type":"related"},{"name":"alkaline phosphomonoesterase activity","type":"related"},{"name":"glycerophosphatase activity","type":"broad"},{"name":"orthophosphoric-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphate-monoester phosphohydrolase (alkaline optimum)","type":"related"},{"name":"phosphomonoesterase activity","type":"broad"}],"termid":"GO:0004035","terms_by_termid":{"GO:0004035":null}}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: SO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence feature that corresponds to a single amino acid residue in a polypeptide.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"polypeptide","termid":"SO:0000104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Amino_acid"],"synonyms":[{"name":"amino acid","type":"exact"}],"termid":"SO:0001237"}


id: GO:2000223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in heart jogging.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in heart jogging (obsolete GO:2000223)","synonyms":[{"name":"regulation of BMP signalling pathway involved in heart jogging pathway involved in somitogenesis","type":"exact"}],"termid":"GO:2000223"}


id: MOD:00747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a sodium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium containing modified residue","synonyms":[{"name":"NaRes","type":"exact"}],"termid":"MOD:00747"}


id: PBO:0028235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arginine_catabolic_process_to_proline","termid":"PBO:0028235"}


id: GO:0030735
data:
  {"annotated_genes":["SJAG_03087"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101230],"is_not":false,"summary":null,"term":"GO:0030735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + carnosine = S-adenosyl-L-homocysteine + anserine + H+.","definition_xrefs":["EC:2.1.1.22","RHEA:14205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03087":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"carnosine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8876789","KEGG_REACTION:R02144","MetaCyc:CARNOSINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:carnosine N-methyltransferase activity","type":"related"}],"termid":"GO:0030735","terms_by_termid":{"GO:0030735":null}}


id: PBO:0050701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 14","termid":"PBO:0050701"}


id: PBO:0045755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin converting enzyme 2","termid":"PBO:0045755"}


id: GO:0015271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an outwardly-rectifying voltage-gated channel. An outwardly rectifying current-voltage relation is one where at any given driving force the outward flow of K+ ions exceeds the inward flow for the opposite driving force.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"outward rectifier potassium channel activity","termid":"GO:0015271"}


id: SO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a translational start codon of CUG.","definition_xrefs":["SO:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_non_canonical_start_codon","termid":"SO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_start_codon_CUG","synonyms":[{"name":"gene with start codon CUG","type":"exact"}],"termid":"SO:0001740"}


id: PBO:0071927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 4","termid":"PBO:0071927"}


id: PBO:0031508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0031508"}


id: PBO:0053840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1106","termid":"PBO:0053840"}


id: GO:1902111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diethyl maleate stimulus.","definition_xrefs":["PMID:12100563","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diethyl maleate","termid":"GO:1902111"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_03268","SJAG_04960","SJAG_03357","SJAG_04391","SJAG_02320","SJAG_03005","SJAG_00284","SJAG_01925","SJAG_02166","SJAG_03938","SJAG_04044","SJAG_03864"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89321,113789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91621],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[114477],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[98016,86865,84764,110227,114874,95644,113774,109944],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[104220,112256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00938":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0048205":null,"GO:0048208":null,"GO:0090522":null,"GO:0099022":null}}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: PBO:0057688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1277","termid":"PBO:0057688"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["Reactome:R-HSA-8940388","RHEA:10832","MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: PBO:0087496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of E3 ubiquitin ligase complex involved in replication repair; stabilizes protein components of the replication fork such as the fork-pausing complex and leading strand polymerase, preventing fork collapse and promoting efficient recovery during replication stress; regulates Ty1 transposition; involved with Rtt101p in nonfunctional rRNA decay","termid":"PBO:0087496"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: PBO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5 (predicted)","termid":"PBO:0017523"}


id: PBO:0035885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_mitochondrial_aggregation","termid":"PBO:0035885"}


id: PBO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein BiP","termid":"PBO:0000823"}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: GO:1901375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an acetate ester from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}


id: PBO:0075649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain containing 4","termid":"PBO:0075649"}


id: GO:0019231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perception of the orientation of different parts of the body with respect to one another.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perception of static position","termid":"GO:0019231"}


id: PBO:0075095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 144","termid":"PBO:0075095"}


id: PBO:0025456
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA feature moved from the opposite strand 7/11/2008","termid":"PBO:0025456"}


id: PBO:0061731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 4 pseudogene","termid":"PBO:0061731"}


id: GO:0009439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanate, NCO-, the anion of cyanic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyanate metabolic process","secondary_identifiers":["MetaCyc:CYANCAT-PWY"],"synonyms":[{"name":"cyanate metabolism","type":"exact"}],"termid":"GO:0009439"}


id: GO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new mechanoreceptors to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"}


id: PBO:0077894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taperin","termid":"PBO:0077894"}


id: PBO:0053746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 973","termid":"PBO:0053746"}


id: PBO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 2","termid":"PBO:0047169"}


id: GO:0009701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid biosynthetic process","termid":"GO:0009717"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid phytoalexin biosynthetic process","synonyms":[{"name":"isoflavonoid phytoalexin anabolism","type":"exact"},{"name":"isoflavonoid phytoalexin biosynthesis","type":"exact"},{"name":"isoflavonoid phytoalexin formation","type":"exact"},{"name":"isoflavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009701"}


id: PBO:0079897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 6","termid":"PBO:0079897"}


id: GO:0048199
data:
  {"annotated_genes":["SJAG_00284","SJAG_04391","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113789,89321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91621],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"}]},"cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport to, from or within the Golgi apparatus; mediated by the addition of specific coat proteins, including COPI and COPII proteins and clathrin, to the membrane during vesicle formation.","definition_xrefs":["GOC:mah","ISBN:0716731363","PMID:10219233","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, to, from or within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle targeting","type":"exact"},{"name":"dictyosome vesicle targeting","type":"narrow"},{"name":"vesicle targeting, to, from or within dictyosome","type":"narrow"}],"termid":"GO:0048199","terms_by_termid":{"GO:0048205":null,"GO:0048208":null}}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: PBO:0066486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 3","termid":"PBO:0066486"}


id: GO:2000495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: GO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochromobilin, the linear tetrapyrrole chromophore required for plant phytochrome photoactivity.","definition_xrefs":["PMID:11500553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0033013","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phytochromobilin metabolic process","synonyms":[{"name":"phytochromobilin metabolism","type":"exact"}],"termid":"GO:0051202"}


id: PBO:0109832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone, AAA family ATPase Rvb1 Rvb2","termid":"PBO:0109832"}


id: GO:0042419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0198506732","GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine metabolic process","termid":"GO:0042414"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine catabolic process","synonyms":[{"name":"adrenaline catabolic process","type":"exact"},{"name":"adrenaline catabolism","type":"exact"},{"name":"epinephrine breakdown","type":"exact"},{"name":"epinephrine catabolism","type":"exact"},{"name":"epinephrine degradation","type":"exact"}],"termid":"GO:0042419"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: SO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that always exists within the promoter region of a prokaryotic gene.","definition_xrefs":["GREEKC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"},{"relation_name":"part_of","term_name":"prokaryotic_promoter","termid":"SO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core_prokaryotic_promoter_element","synonyms":[{"name":"core prokaryotic promoter element","type":"exact"},{"name":"general transcription factor binding site","type":"related"}],"termid":"SO:0002312"}


id: GO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"positively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of amino acid metabolic process","synonyms":[{"name":"activation of amino acid metabolic process","type":"narrow"},{"name":"positive regulation of amino acid metabolism","type":"exact"},{"name":"positive regulation of cellular amino acid metabolic process","type":"exact"},{"name":"stimulation of amino acid metabolic process","type":"narrow"},{"name":"up regulation of amino acid metabolic process","type":"exact"},{"name":"up-regulation of amino acid metabolic process","type":"exact"},{"name":"upregulation of amino acid metabolic process","type":"exact"}],"termid":"GO:0045764"}


id: PBO:0082967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying replication of positive-strand RNA viruses in their natural hosts","termid":"PBO:0082967"}


id: PBO:0077655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 6b","termid":"PBO:0077655"}


id: PBO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030802"}


id: PR:O74473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"SIN scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc11","type":"exact"},{"name":"cell division control protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74473"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: GO:0099102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any G-protein gated potassium channel activity that is involved regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos","PMID:9429760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G-protein gated potassium channel activity","termid":"GO:0099101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"G-protein gated potassium channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099102"}


id: PBO:0054342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1735","termid":"PBO:0054342"}


id: GO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","PMID:16551252","PMID:16551262","PMID:15826826","PMID:16319493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte homeostasis","termid":"GO:0002260"}


id: PBO:0080993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB24 divergent transcript","termid":"PBO:0080993"}


id: GO:0018391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ATP-dependent addition of a tyrosine residue to a glutamic acid residue at the C-terminus of a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamic acid tyrosinylation (obsolete GO:0018391)","termid":"GO:0018391"}


id: GO:0043929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle), as part of the double layer follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"double layer follicle stage","termid":"GO:0048161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in double layer follicle stage","synonyms":[{"name":"primary ovarian follicle growth during double layer follicle stage","type":"related"}],"termid":"GO:0043929"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: PBO:0055270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2697","termid":"PBO:0055270"}


id: PBO:0082329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; releases Rlp24p from purified pre-60S particles in vitro; target of the ribosomal biosynthesis inhibitor diazaborine; may be involved in degradation of aberrant mRNAs","termid":"PBO:0082329"}


id: PBO:0080682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS/WASL interacting protein family member 2","termid":"PBO:0080682"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111592],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: GO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential release of a C-terminal arginine or lysine residue. Function is inhibited by diisopropyl fluorophosphate and sensitive to thiol-blocking reagents.","definition_xrefs":["EC:3.4.16.6"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase D activity (obsolete GO:0004187)","synonyms":[{"name":"CPDW-II","type":"related"},{"name":"KEX1 carboxypeptidase activity","type":"related"},{"name":"KEX1 proteinase activity","type":"related"},{"name":"KEX1DELTAp","type":"related"},{"name":"carboxypeptidase D activity","type":"exact"},{"name":"carboxypeptidase KEX1 activity","type":"narrow"},{"name":"carboxypeptidase Kex1","type":"related"},{"name":"carboxypeptidase S1 activity","type":"related"},{"name":"cereal serine carboxypeptidase II","type":"related"},{"name":"gene KEX1 serine carboxypeptidase","type":"narrow"},{"name":"saccharomyces cerevisiae KEX1 gene product","type":"related"}],"termid":"GO:0004187"}


id: PBO:0038546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17A, depalmitoylase","termid":"PBO:0038546"}


id: PBO:0049783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 18","termid":"PBO:0049783"}


id: GO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of viral glycoprotein metabolic process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation by host of viral process","termid":"GO:0044793"},{"relation_name":"is_a","term_name":"modulation by host of viral glycoprotein metabolic process","termid":"GO:0044870"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral glycoprotein metabolic process","termid":"GO:0044871"}


id: PBO:0039983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5B","termid":"PBO:0039983"}


id: PBO:0040768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 3","termid":"PBO:0040768"}


id: PATO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of its constitution.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a substance","termid":"PATO:0002198"}


id: PR:Q9UTP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.05 gene.","definition_xrefs":["UniProtKB:Q9UTP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.05","synonyms":[{"name":"Spom972h-SPAC1093.05","type":"exact"}],"termid":"PR:Q9UTP9"}


id: FYPO:0001108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione-disulfide reductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutathione-disulfide reductase activity","termid":"FYPO:0001106"},{"relation_name":"is_a","term_name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased glutathione-disulfide reductase activity","synonyms":[{"name":"increased glutathione-disulphide reductase activity","type":"exact"}],"termid":"FYPO:0001108"}


id: PBO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: PBO:0065401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 4","termid":"PBO:0065401"}


id: PBO:0068181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 488","termid":"PBO:0068181"}


id: FYECO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CdSO4","synonyms":[{"name":"+ cadmium sulfate","type":"related"}],"termid":"FYECO:0000247"}


id: PR:O14399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.08c","synonyms":[{"name":"Spom972h-ned8","type":"exact"}],"termid":"PR:O14399"}


id: PBO:0087710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; protein abundance increases in response to DNA replication stress","termid":"PBO:0087710"}


id: PBO:0003136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter (predicted)","termid":"PBO:0003136"}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: PATO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being abnormally developed, usually due to malnutrition.","definition_xrefs":["Wiikipedia:Wiikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic","synonyms":[{"name":"dystrophied","type":"exact"},{"name":"dystrophy","type":"related"}],"termid":"PATO:0001780"}


id: PBO:0058047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4268","termid":"PBO:0058047"}


id: PBO:0083067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a family of dihydrouridine synthases including Dus1p, Smm1p, Dus3p, and Dus4p; modifies uridine residues at position 20 of cytoplasmic tRNAs","termid":"PBO:0083067"}


id: _global:causally_upstream_of,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within,_negative_effect","termid":"_global:causally_upstream_of_or_within,_negative_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_negative_effect","secondary_identifiers":["RO:0002305"],"termid":"_global:causally_upstream_of,_negative_effect"}


id: PBO:0076574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 2","termid":"PBO:0076574"}


id: GO:0140246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a synapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process at synapse","termid":"GO:0140246"}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: GO:0061677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate = pyruvate + D-glyceraldehyde.","definition_xrefs":["RHEA:35583","GOC:dph","PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconate aldolase activity","secondary_identifiers":["MetaCyc:DHDOGALDOL-RXN","GO:0043725","EC:4.1.2.51"],"synonyms":[{"name":"2-keto-3-deoxygluconate aldolase activity","type":"exact"},{"name":"KDG aldolase activity","type":"exact"}],"termid":"GO:0061677"}


id: FYPO:0006320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the increase in small deletions or duplications (\\\"replication slippage\\\") that normally results from processing arrested replication forks is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal replication slippage during replication fork processing","synonyms":[{"name":"normal replication slippage during replication fork processing during vegetative growth","type":"related"},{"name":"normal replication slippage during replication fork processing during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006320"}


id: GO:1904913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:BHF_telomere","GOC:rph","PMID:26586433","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904913"}


id: GO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001196)","termid":"GO:0001196"}


id: GO:0141049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionylated protein (PSSG) + glutathione (GSH) = protein-thiol (PSH) + glutathione disulfide (GSSG). The reaction may proceed via a 'monothiol' or 'dithiol' mechanism.","definition_xrefs":["PMID:23397885","PMID:33932870","PMID:36771108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0015036"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0015036","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"protein-glutathione oxidoreductase (glutathione) activity","synonyms":[{"name":"glutaredoxin activity","type":"broad"},{"name":"glutathione oxidoreductase activity","type":"broad"}],"termid":"GO:0141049"}


id: GO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycourobilin to phycoerythrins.","definition_xrefs":["RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycourobilin linkage","termid":"GO:0017010"}


id: GO:0001161
data:
  {"annotated_genes":["SJAG_03519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001162"}]},"cv_name":"molecular_function","definition":"Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0000976","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intronic transcription regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044213"],"synonyms":[{"name":"intronic transcription regulatory region DNA binding","type":"related"}],"termid":"GO:0001161","terms_by_termid":{"GO:0001162":null}}


id: PBO:0016906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu31","termid":"PBO:0016906"}


id: PBO:0054390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1786","termid":"PBO:0054390"}


id: PBO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 47","termid":"PBO:0050269"}


id: GO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance metabolic process (obsolete GO:0071704)","synonyms":[{"name":"organic molecular entity metabolic process","type":"exact"},{"name":"organic molecular entity metabolism","type":"exact"},{"name":"organic substance metabolism","type":"exact"}],"termid":"GO:0071704"}


id: PBO:0083789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA processing and ribosome biogenesis; forms a complex with Utp22p; protein abundance increases in response to DNA replication stress","termid":"PBO:0083789"}


id: GO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus cartilage is generated and organized. The bronchus cartilage is the connective tissue of the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage morphogenesis","termid":"GO:0060536"},{"relation_name":"part_of","term_name":"bronchus morphogenesis","termid":"GO:0060434"},{"relation_name":"part_of","term_name":"bronchus cartilage development","termid":"GO:0060532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus cartilage morphogenesis","termid":"GO:0060533"}


id: PBO:0084631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase for rRNA; methylates pseudouridine 18S rRNA residue 1191; member of the SPOUT methyltransferase family; required for maturation of 18S rRNA and for 40S ribosomal subunit production independent of methyltransferase activity; forms homodimers; human ortholog is mutated in Bowen-Conradi syndrome, and equivalent yeast mutation affects Emg1p dimerization and localization but not methyltransferase activity; human EMG1 complements lethality of null and ts mutant","termid":"PBO:0084631"}


id: GO:0045566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045566)","synonyms":[{"name":"activation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 1 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 1 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 1 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 1 biosynthetic process","type":"exact"}],"termid":"GO:0045566"}


id: PBO:0028101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_alcohol_dehydrogenase_activity","termid":"PBO:0028101"}


id: MOD:01031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylbenzyl","synonyms":[{"name":"diMeBzl","type":"exact"}],"termid":"MOD:01031"}


id: GO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine, and S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["EC:2.1.1.157"],"gene_count":0,"genotype_count":0,"name":"obsolete sarcosine/dimethylglycine N-methyltransferase activity (obsolete GO:0033805)","synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"SDMT","type":"related"},{"name":"sarcosine dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"sarcosine dimethylglycine methyltransferase activity","type":"narrow"},{"name":"sarcosine/dimethylglycine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033805"}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: MOD:00372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-tyrosine residues with a carbon-carbon bond to form 3'-(3'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:14249161","PubMed:8937563","PubMed:637884","RESID:AA0367","PubMed:8702710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(3'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S,2'S)-3,3'-(6,6'-dihydroxybiphenyl-3,3'-diyl)bis(2-aminopropanoic acid)","type":"exact"},{"name":"3'-(L-tyros-3'-yl)-L-tyrosine","type":"exact"},{"name":"3,3'-BiTyr (Crosslink)","type":"exact"},{"name":"6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-bis(2-aminopropanoic acid)","type":"exact"},{"name":"alpha,alpha'-diamino-6,6'-dihydroxy-(1,1'-biphenyl)-3,3'-dipropanoic acid","type":"exact"},{"name":"bityrosine","type":"exact"},{"name":"o,o-dityrosine","type":"exact"}],"termid":"MOD:00372"}


id: GO:1904013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to xenon atom.","definition_xrefs":["GOC:TermGenie","PMID:10089464","GO_REF:0000067"],"gene_count":0,"genotype_count":0,"name":"obsolete xenon atom binding (obsolete GO:1904013)","termid":"GO:1904013"}


id: GO:0004722
data:
  {"annotated_genes":["SJAG_03893","SJAG_02389","SJAG_02203","SJAG_03310","SJAG_03631","SJAG_02433","SJAG_00600","SJAG_03624","SJAG_04426","SJAG_01906","SJAG_02536","SJAG_02854","SJAG_03126","SJAG_03482","SJAG_00082","SJAG_01790","SJAG_00823","SJAG_03185","SJAG_01672","SJAG_01286","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85318,86129,89562,92080,93301,93731,94637,96372,100589,103490,105811,106157,108041,110150,111542,112660,113141],"is_not":false,"summary":null,"term":"GO:0004722"},{"annotations":[84001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[109441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004723"},{"annotations":[109442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[113140,92079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[89748,93302,87707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[91940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[108042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04426":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140096","GO:0004721"],"is_obsolete":false,"name":"protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0106307","Reactome:R-HSA-199959","Reactome:R-HSA-1295632","Reactome:R-HSA-199425","Reactome:R-HSA-201790","GO:0004724","Reactome:R-HSA-2187401","Reactome:R-HSA-9660538","Reactome:R-HSA-9660536","GO:0000163","GO:0030361","Reactome:R-HSA-5675433","Reactome:R-HSA-3601585","Reactome:R-HSA-9831948","GO:0030358","Reactome:R-HSA-209055","Reactome:R-HSA-380949","EC:3.1.3.16","Reactome:R-HSA-8948139","GO:0008598","Reactome:R-HSA-6811504","Reactome:R-HSA-5672961","Reactome:R-HSA-163568","Reactome:R-HSA-3002811","Reactome:R-HSA-5694421","Reactome:R-HSA-6792863","Reactome:R-HSA-429730","GO:0030357","Reactome:R-HSA-9619449","GO:0015071","Reactome:R-HSA-5683405","Reactome:R-HSA-5692754","Reactome:R-HSA-9619430","Reactome:R-HSA-9619467","Reactome:R-HSA-9658445","GO:0000158","Reactome:R-HSA-2995388","Reactome:R-HSA-163750","GO:0106306","Reactome:R-HSA-201787","Reactome:R-HSA-163689","Reactome:R-HSA-4419948","Reactome:R-HSA-5675431","Reactome:R-HSA-5687758","Reactome:R-HSA-74948","Reactome:R-HSA-5672957","GO:0008600","Reactome:R-HSA-1638821","GO:0030360","MetaCyc:3.1.3.16-RXN","Reactome:R-HSA-5679206","Reactome:R-HSA-5693153","Reactome:R-HSA-9686524","Reactome:R-HSA-4088141"],"synonyms":[{"name":"magnesium-dependent protein serine/threonine phosphatase activity","type":"related"},{"name":"phosphatase I","type":"narrow"},{"name":"phosphatase II","type":"narrow"},{"name":"phosphatase III","type":"narrow"},{"name":"protein phosphatase type 1 activity","type":"narrow"},{"name":"protein phosphatase type 2A activity","type":"narrow"},{"name":"protein phosphatase type 2B activity","type":"narrow"},{"name":"protein phosphatase type 2C activity","type":"narrow"},{"name":"protein phosphatase-1","type":"narrow"},{"name":"protein phosphatase-2A","type":"narrow"},{"name":"protein phosphatase-2B","type":"narrow"},{"name":"protein phosphatase-2C","type":"narrow"},{"name":"protein serine phosphatase activity","type":"narrow"},{"name":"protein threonine phosphatase activity","type":"narrow"},{"name":"serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:0004722","terms_by_termid":{"GO:0004722":null,"GO:0004723":null,"GO:0004741":null,"GO:0008420":null,"GO:0033192":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: PBO:0031707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination","termid":"PBO:0031707"}


id: PR:O94548
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1322.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of telomere capping protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.09","synonyms":[{"name":"Spom972h-SPCC1322.09","type":"exact"}],"termid":"PR:O94548"}


id: PR:C6Y4C0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor C222.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.18","synonyms":[{"name":"Spom972h-SPAC222.18","type":"exact"}],"termid":"PR:C6Y4C0"}


id: GO:0009352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Complex that possesses dihydrolipoyl dehydrogenase activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoyl dehydrogenase complex (obsolete GO:0009352)","synonyms":[{"name":"dihydrolipoamide dehydrogenase complex","type":"exact"},{"name":"dihydrolipoyl dehydrogenase complex","type":"exact"}],"termid":"GO:0009352"}


id: GO:1905417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amoeboid sperm motility","synonyms":[{"name":"down regulation of ameboid sperm motility","type":"exact"},{"name":"down regulation of ameboid sperm movement","type":"exact"},{"name":"down regulation of amoeboid sperm motility","type":"exact"},{"name":"down regulation of amoeboid sperm movement","type":"exact"},{"name":"down-regulation of ameboid sperm motility","type":"exact"},{"name":"down-regulation of ameboid sperm movement","type":"exact"},{"name":"down-regulation of amoeboid sperm motility","type":"exact"},{"name":"down-regulation of amoeboid sperm movement","type":"exact"},{"name":"downregulation of ameboid sperm motility","type":"exact"},{"name":"downregulation of ameboid sperm movement","type":"exact"},{"name":"downregulation of amoeboid sperm motility","type":"exact"},{"name":"downregulation of amoeboid sperm movement","type":"exact"},{"name":"inhibition of ameboid sperm motility","type":"narrow"},{"name":"inhibition of ameboid sperm movement","type":"narrow"},{"name":"inhibition of amoeboid sperm motility","type":"narrow"},{"name":"inhibition of amoeboid sperm movement","type":"narrow"},{"name":"negative regulation of ameboid sperm motility","type":"exact"},{"name":"negative regulation of ameboid sperm movement","type":"exact"},{"name":"negative regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905417"}


id: PBO:0060753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 3","termid":"PBO:0060753"}


id: PBO:0041530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 95","termid":"PBO:0041530"}


id: GO:0004358
data:
  {"annotated_genes":["SJAG_01592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98718],"is_not":false,"summary":null,"term":"GO:0004358"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-ornithine + L-glutamate = N-acetyl-L-glutamate + L-ornithine.","definition_xrefs":["EC:2.3.1.35","RHEA:15349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"glutamate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02282","MetaCyc:GLUTAMATE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"N-acetyl-L-glutamate synthetase activity","type":"broad"},{"name":"N-acetylglutamate synthase activity","type":"broad"},{"name":"N-acetylglutamate synthetase activity","type":"broad"},{"name":"N2-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"acetylglutamate synthetase activity","type":"related"},{"name":"acetylglutamate-acetylornithine transacetylase activity","type":"related"},{"name":"acetylglutamic synthetase activity","type":"related"},{"name":"acetylglutamic-acetylornithine transacetylase activity","type":"related"},{"name":"acetylornithinase activity","type":"broad"},{"name":"acetylornithine glutamate acetyltransferase activity","type":"related"},{"name":"alpha-N-acetyl-L-ornithine:L-glutamate N-acetyltransferase activity","type":"related"},{"name":"glutamate acetyltransferase activity","type":"related"},{"name":"ornithine acetyltransferase activity","type":"related"},{"name":"ornithine transacetylase activity","type":"related"}],"termid":"GO:0004358","terms_by_termid":{"GO:0004358":null}}


id: PBO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap14","termid":"PBO:0001520"}


id: PATO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having three nuclei.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"PATO:0001908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleate","termid":"PATO:0001909"}


id: CHEBI:46442
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanadate(3-)","termid":"CHEBI:46442"}


id: FYPO:0001571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a greater extent than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"increased protein-protein interaction","synonyms":[{"name":"increased protein binding","type":"exact"}],"termid":"FYPO:0001571"}


id: PBO:0041411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C7","termid":"PBO:0041411"}


id: GO:0008010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of chitin-based larval cuticle","synonyms":[{"name":"structural constituent of larval cuticle","type":"broad"}],"termid":"GO:0008010"}


id: PBO:0109965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX7 divergent transcript","termid":"PBO:0109965"}


id: GO:0098708
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110245,113268],"is_not":false,"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of glucose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"},{"relation_name":"is_a","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"glucose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990821","GO:0061490"],"synonyms":[{"name":"glucose import into cell","type":"exact"},{"name":"high affinity glucose import","type":"narrow"}],"termid":"GO:0098708","terms_by_termid":{"GO:0098708":null}}


id: GO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a cell switches cell cycle mode from meiotic to mitotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle switching, meiotic to mitotic cell cycle (obsolete GO:0051727)","synonyms":[{"name":"cell cycle switching, meiosis to mitosis","type":"narrow"},{"name":"cell cycle switching, meiotic to mitotic cell cycle","type":"exact"},{"name":"conversion to mitosis","type":"narrow"},{"name":"conversion to mitotic cell cycle","type":"exact"},{"name":"entry into mitosis","type":"narrow"},{"name":"entry into mitotic cell cycle","type":"exact"},{"name":"initiation of mitosis","type":"narrow"},{"name":"initiation of mitotic cell cycle","type":"exact"},{"name":"mitotic entry","type":"narrow"}],"termid":"GO:0051727"}


id: SO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An U-box is a conserved T-rich region upstream of a retroviral polypurine tract that is involved in PPT primer creation during reverse transcription.","definition_xrefs":["PMID:9649446","PMID:10556309","PMID:11577982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U_box","synonyms":[{"name":"U-box","type":"exact"}],"termid":"SO:0001788"}


id: PBO:0039545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 42","termid":"PBO:0039545"}


id: GO:1902314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroquinone.","definition_xrefs":["GOC:TermGenie","PMID:15667223","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hydroquinone binding","synonyms":[{"name":"quinol binding","type":"exact"}],"termid":"GO:1902314"}


id: PBO:0091092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane V-ATPase assembly factor Pkr1","termid":"PBO:0091092"}


id: GO:0060883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates interactions between a cell and its surroundings that modulates of the rate, frequency or extent of basement membrane disassembly involved in semicircular canal fusion.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication (obsolete GO:0060883)","synonyms":[{"name":"regulation of basal lamina disassembly involved in semicircular canal fusion by cell communication","type":"related"}],"termid":"GO:0060883"}


id: PBO:0083187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YFR011C; identified by expression profiling and mass spectrometry","termid":"PBO:0083187"}


id: GO:0046254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"anaerobic toluene catabolic process","secondary_identifiers":["MetaCyc:PWY-81"],"synonyms":[{"name":"anaerobic toluene breakdown","type":"exact"},{"name":"anaerobic toluene catabolism","type":"exact"},{"name":"anaerobic toluene degradation","type":"exact"}],"termid":"GO:0046254"}


id: GO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to protein kinase A and anchors it to a particular subcellular location.","definition_xrefs":["PMID:10354567"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase A anchoring activity (obsolete GO:0005079)","synonyms":[{"name":"A-kinase anchor protein activity","type":"exact"},{"name":"AKAP activity","type":"exact"},{"name":"protein kinase A anchoring activity","type":"exact"}],"termid":"GO:0005079"}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: PBO:0044348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 33","termid":"PBO:0044348"}


id: GO:0035557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is passed on from a receptor at the cell surface to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.","definition_xrefs":["GOC:signaling","ISBN:3527303782"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in cell surface receptor linked signaling (obsolete GO:0035557)","synonyms":[{"name":"intracellular signal transduction involved in cell surface receptor linked signaling","type":"exact"},{"name":"intracellular signal transduction involved in cell surface receptor linked signalling","type":"exact"},{"name":"intracellular signaling cascade involved in cell surface receptor linked signaling","type":"exact"},{"name":"intracellular signaling chain involved in cell surface receptor signaling","type":"exact"}],"termid":"GO:0035557"}


id: PR:Q9P380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide transporter ptr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.04c","synonyms":[{"name":"Spom972h-ptr2","type":"exact"},{"name":"peptide permease ptr2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P380"}


id: PR:O14328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ksp1 gene.","definition_xrefs":["UniProtKB:O14328","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.13","synonyms":[{"name":"Spom972h-ksp1","type":"exact"},{"name":"serine/threonine-protein kinase ppk20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14328"}


id: GO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric distal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["PMID:18787069","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric distal tubule development","termid":"GO:0035777"}


id: PATO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that describes the power of an atom to attract electrons to itself .","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electronegativity","termid":"PATO:0002197"}


id: GO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polymer of five or six IgM core units each composed of two identical immunoglobulin heavy chains of the IgM isotype and two identical immunoglobulin light chains, held together by disulfide bonds; the individual IgM core units are held together via disulfide bonds with a single J chain polypeptide acting as a bridge between two of the polymeric units. Circulating IgM is present in the extracellular space, in mucosal areas or other tissues, or in the blood or lymph.","definition_xrefs":["PMID:20176268","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgM immunoglobulin complex","termid":"GO:0071753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgM immunoglobulin complex, circulating","synonyms":[{"name":"IgM antibody","type":"exact"}],"termid":"GO:0071754"}


id: PBO:0088813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah2","termid":"PBO:0088813"}


id: PBO:0028050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_bodies_present_in_increased_numbers_during_meiosis","termid":"PBO:0028050"}


id: PBO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euchromatic histone lysine methyltransferase 2","termid":"PBO:0045984"}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-6955","PMID:8577249","UniPathway:UPA00161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"},{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"}],"termid":"GO:1901774"}


id: GO:0003340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003340"}


id: PBO:0003824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.41","termid":"PBO:0003824"}


id: GO:0032262
data:
  {"annotated_genes":["SJAG_04354","SJAG_03708","SJAG_04713","SJAG_00533","SJAG_04709"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110979,89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88071,84592,110981,83605,89063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces a pyrimidine nucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleotide salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032262","terms_by_termid":{"GO:0044206":null,"GO:0044211":null}}


id: PBO:0059032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 21","termid":"PBO:0059032"}


id: GO:0021796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon regionalization","termid":"GO:0021978"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex regionalization","synonyms":[{"name":"cerebral cortex arealization","type":"exact"},{"name":"cerebral cortex pattern biosynthesis","type":"exact"},{"name":"cerebral cortex pattern formation","type":"exact"}],"termid":"GO:0021796"}


id: GO:0038154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of interleukin-11 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-11-mediated signaling pathway","synonyms":[{"name":"IL-11-mediated signaling pathway","type":"exact"},{"name":"interleukin-11-mediated signalling pathway","type":"exact"}],"termid":"GO:0038154"}


id: PBO:0034271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_develop_into","termid":"PBO:0034271"}


id: FYPO:0000376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is decreased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of apoptosis","synonyms":[{"name":"apoptosis: decreased","type":"related"},{"name":"decreased apoptosis","type":"exact"},{"name":"decreased apoptotic frequency","type":"exact"},{"name":"reduced frequency of apoptosis","type":"exact"}],"termid":"FYPO:0000376"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: PBO:0109646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPRSS11B N-terminal like (pseudogene)","termid":"PBO:0109646"}


id: GO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.","definition_xrefs":["PMID:11948193"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease R activity (obsolete GO:0008997)","termid":"GO:0008997"}


id: PBO:0029229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_EPC","termid":"PBO:0029229"}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: GO:0030929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses ADPG pyrophosphorylase activity. In all organisms where it has been found, the complex is a tetramer. In bacteria, it is a homotetramer. In plants, the complex is a heterotetramer composed small and large subunits.","definition_xrefs":["PMID:9680965","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ADPG pyrophosphorylase complex","termid":"GO:0030929"}


id: PBO:0049492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 2","termid":"PBO:0049492"}


id: GO:0150195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:21349151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"transport across BCSFB","type":"exact"},{"name":"transport across blood-CSF barrier","type":"exact"},{"name":"transport across blood/CSF barrier","type":"exact"},{"name":"transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0150195"}


id: GO:0030626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U12 small nuclear RNA (U12 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U12 snRNA binding","termid":"GO:0030626"}


id: PBO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol transporter Itr1","termid":"PBO:0001652"}


id: PBO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin A interacting protein 1 like","termid":"PBO:0047626"}


id: MOD:00789
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.","definition_xrefs":["URL:http://www.serva.de/products/sheets/39230-E.pdf","PubMed:15602776","Unimod:364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, heavy form","type":"related"},{"name":"ICPL:13C(6)","type":"related"}],"termid":"MOD:00789"}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: PBO:0083540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YLR121C","termid":"PBO:0083540"}


id: PBO:0044569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger","termid":"PBO:0044569"}


id: GO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system development","termid":"GO:0051962"},{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of synapse assembly","synonyms":[{"name":"activation of synapse assembly","type":"narrow"},{"name":"positive regulation of synapse biogenesis","type":"exact"},{"name":"positive regulation of synaptogenesis","type":"exact"},{"name":"stimulation of synapse assembly","type":"narrow"},{"name":"up regulation of synapse assembly","type":"exact"},{"name":"up-regulation of synapse assembly","type":"exact"},{"name":"upregulation of synapse assembly","type":"exact"}],"termid":"GO:0051965"}


id: PBO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 6 pseudogene","termid":"PBO:0048664"}


id: GO:1990930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N1-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26863196","PMID:26863410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0140098","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mRNA N1-methyladenosine dioxygenase activity","secondary_identifiers":["EC:1.14.11.54","RHEA:49516"],"synonyms":[{"name":"RNA N(1)-methyladenosine dioxygenase activity","type":"related"},{"name":"RNA N1-methyladenosine dioxygenase activity","type":"related"}],"termid":"GO:1990930"}


id: PBO:0083092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor required for activating GAL genes; responds to galactose; repressed by Gal80p and activated by Gal3p","termid":"PBO:0083092"}


id: GO:0060110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer of cuticle most closely apposed to the hypodermal cells. The morphology of the basal layer varies with life stage. In adult C. elegans animals, the basal layers is comprised of three sublayers: two fibrous layers whose fibers run in clockwise and counter-clockwise directions meeting one another at a 60 degree angle, and an amorphous basal layer that lies underneath the fibrous layers and directly contacts the hypodermis. In C. elegans dauer and L1 larval stage animals, the basal layer is characterized by a striated pattern that appears to derive from interwoven laminae. An example of this component is found in Caenorhabditis elegans.","definition_xrefs":["GOC:dph","GOC:kmv","ISSN:15518507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal layer of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"basal layer of collagen and cuticulin-based exoskeleton extracellular matrix","type":"related"}],"termid":"GO:0060110"}


id: GO:0019975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:jl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-17 binding","synonyms":[{"name":"IL-17 binding","type":"exact"}],"termid":"GO:0019975"}


id: PBO:0063534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing ring finger 3","termid":"PBO:0063534"}


id: PBO:0076792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 2","termid":"PBO:0076792"}


id: PR:O74503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spp27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor subunit spp27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.17","synonyms":[{"name":"Spom972h-spp27","type":"exact"},{"name":"p27 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"p30 (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"upstream activation factor 27 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor 30 KDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"upstream activation factor subunit uaf30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74503"}


id: PR:O14039
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S rRNA (cytosine-C(5))-methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01769","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"25S rRNA (cytosine-C(5))-methyltransferase rcm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.06c","secondary_identifiers":["UniProtKB:O14039"],"synonyms":[{"name":"Spom972h-NSUN5","type":"exact"},{"name":"rRNA m(5)C methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14039"}


id: PBO:0060656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor corepressor 2","termid":"PBO:0060656"}


id: PBO:0087538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA is comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing","termid":"PBO:0087538"}


id: PBO:0026875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_clipping","termid":"PBO:0026875"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["RHEA:40459","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389889","Reactome:R-HSA-389891"],"termid":"GO:0016402"}


id: GO:0018788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atrazine + H2O = chloride + H+ + hydroxyatrazine.","definition_xrefs":["RHEA:11312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"atrazine chlorohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05558","MetaCyc:3.8.1.8-RXN","EC:3.8.1.8","UM-BBD_reactionID:r0113"],"synonyms":[{"name":"AtzA","type":"related"}],"termid":"GO:0018788"}


id: PBO:0061673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58 pseudogene 1","termid":"PBO:0061673"}


id: PBO:0087421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 9 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; required for electron transfer at the ubiquinol oxidase site of the complex","termid":"PBO:0087421"}


id: PBO:0043423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit alpha 1","termid":"PBO:0043423"}


id: PR:Q9P3B0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1565.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3B0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1565.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1565.03","synonyms":[{"name":"Spom972h-SPAC1565.03","type":"exact"}],"termid":"PR:Q9P3B0"}


id: PBO:0076332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 1","termid":"PBO:0076332"}


id: GO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"}


id: GO:0051994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the phosphorus atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"P-methyltransferase activity","termid":"GO:0051994"}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"gap junction assembly","termid":"GO:0016264"}


id: GO:0075319
data:
  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114267],"is_not":false,"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"positively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascus development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075319","terms_by_termid":{"GO:0075319":null}}


id: GO:0047424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + methylenediurea = CO2 + 2 NH3 + N-hydroxymethylurea.","definition_xrefs":["MetaCyc:3.5.3.21-RXN","RHEA:15929","EC:3.5.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenediurea deaminase activity","synonyms":[{"name":"methylenediurea aminohydrolase activity","type":"related"},{"name":"methylenediurease activity","type":"related"}],"termid":"GO:0047424"}


id: PBO:0063810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 2","termid":"PBO:0063810"}


id: GO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides.","definition_xrefs":["PMID:10429200"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanophycinase activity (obsolete GO:0043859)","synonyms":[{"name":"cyanophycinase activity","type":"exact"}],"termid":"GO:0043859"}


id: PBO:0045011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog A","termid":"PBO:0045011"}


id: PBO:0044637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decorin","termid":"PBO:0044637"}


id: GO:0106367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2'-deoxyribonucleoside 5'-phosphate + dGTP = a 2'-deoxyribonucleoside 5'-diphosphate + dGDP.","definition_xrefs":["PMID:20497505","RHEA:62128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(deoxy)nucleoside phosphate kinase activity, dGTP as phosphate donor","termid":"GO:0106367"}


id: PBO:0071768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 1","termid":"PBO:0071768"}


id: FYPO:0004777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal farnesyltranstransferase activity","termid":"FYPO:0004777"}


id: PBO:0108576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108576"}


id: GO:0010381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a peroxisome to a chloroplast via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:17215364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"peroxisome-chloroplast membrane tethering","synonyms":[{"name":"attachment of peroxisome to chloroplast","type":"exact"}],"termid":"GO:0010381"}


id: PBO:0084027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transporter; regulates Golgi function and glycosylation in Golgi; VRG4 has a paralog, HVG1, that arose from the whole genome duplication","termid":"PBO:0084027"}


id: PBO:0027116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_premeiotic_DNA_replication_during_azygotic_meiosis","termid":"PBO:0027116"}


id: PR:O94502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03222","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12D12.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.05c","secondary_identifiers":["UniProtKB:O94502"],"synonyms":[{"name":"Spom972h-SLC25A41","type":"exact"}],"termid":"PR:O94502"}


id: PBO:0005299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WDR89 family WD repeat protein","termid":"PBO:0005299"}


id: PBO:0075410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPACA6 antisense RNA 1","termid":"PBO:0075410"}


id: GO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein with specific molecules in the cytoplasm, thereby inhibiting its transport to the cell membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of CFTR protein (obsolete GO:0043004)","synonyms":[{"name":"cytoplasmic retention of CFTR (cystic fibrosis transmembrane conductance regulator) protein","type":"exact"},{"name":"cytoplasmic sequestering of cystic fibrosis transmembrane conductance regulator protein","type":"exact"},{"name":"cytoplasmic sequestration of CFTR (cystic fibrosis transmembrane conductance regulator protein)","type":"exact"},{"name":"cytoplasmic storage of CFTR (cystic fibrosis transmembrane conductance regulator) protein","type":"exact"},{"name":"maintenance of CFTR protein location in cytoplasm","type":"exact"},{"name":"retention of CFTR (cystic fibrosis transmembrane conductance regulator) protein in cytoplasm","type":"exact"},{"name":"sequestering of CFTR (cystic fibrosis transmembrane conductance regulator protein) in cytoplasm","type":"exact"},{"name":"sequestration of CFTR (cystic fibrosis transmembrane conductance regulator protein) in cytoplasm","type":"exact"},{"name":"storage of CFTR (cystic fibrosis transmembrane conductance regulator) protein in cytoplasm","type":"exact"}],"termid":"GO:0043004"}


id: PR:P22774-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-1.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Long (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-1"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Long","type":"exact"},{"name":"heat shock 70 kDa protein, mitochondrial isoform Mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22774-1"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0056240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGOH divergent transcript","termid":"PBO:0056240"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: PBO:0039568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD62P1-PARP4P3 readthrough, transcribed pseudogene","termid":"PBO:0039568"}


id: PBO:0071941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 18","termid":"PBO:0071941"}


id: PR:Q9UU82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are2 gene.","definition_xrefs":["UniProtKB:Q9UU82","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.05c","synonyms":[{"name":"Spom972h-are2","type":"exact"},{"name":"sterol-ester synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU82"}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: PBO:0088849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap113","termid":"PBO:0088849"}


id: PBO:0073013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit alpha","termid":"PBO:0073013"}


id: PBO:0076808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin bundle interacting protein 1","termid":"PBO:0076808"}


id: MOD:00837
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes four (2)H deuterium atoms for four (1)H protium atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium substituted residue","termid":"MOD:00786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deuterium tetrasubstituted residue","synonyms":[{"name":"D(H)4Res","type":"exact"}],"termid":"MOD:00837"}


id: PBO:0015250
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pat1-as2 allele undergoes synchronous meiosis at 25 degrees C in presence of ATP analog","termid":"PBO:0015250"}


id: GO:0022406
data:
  {"annotated_genes":["SJAG_02699","SJAG_01564","SJAG_03710","SJAG_04221","SJAG_01929","SJAG_00380","SJAG_02626","SJAG_01697","SJAG_00280","SJAG_03499","SJAG_04417","SJAG_01116","SJAG_01305","SJAG_00053","SJAG_01598","SJAG_01168","SJAG_04023","SJAG_05184","SJAG_03347","SJAG_04966","SJAG_02587","SJAG_04413","SJAG_01324","SJAG_00029","SJAG_01772","SJAG_02320","SJAG_01633","SJAG_00171","SJAG_03247","SJAG_03848","SJAG_03536","SJAG_04370","SJAG_03005","SJAG_04978","SJAG_01437","SJAG_03552","SJAG_03170","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[87587,114196,97883,107738,114982,114717,86527,93558,100466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[91659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[101921,103104,103734,87018,112686,103606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[105504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[103106,111270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[90427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[97222,96411,105736,114578,105887,95609,113601,96311,108760,104762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[88430,113562,114476,114252,85848,114873,96352,86693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a membrane or protein to a target membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["PMID:27875684","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane docking","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0022406","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: FYPO:0006536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell periphery during vegetative growth","synonyms":[{"name":"increased protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"increased protein localization to cell periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006536"}


id: GO:0007280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a pole cell (germline progenitors in insects) from its site of production at the posterior pole of the embryo through to the site where the gonads will form.","definition_xrefs":["PMID:9988212","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete pole cell migration (obsolete GO:0007280)","termid":"GO:0007280"}


id: PBO:0080365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 20 pseudogene","termid":"PBO:0080365"}


id: SO:0000783
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a region that was modified in vitro.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered","termid":"SO:0000783"}


id: GO:0031312
data:
  {"annotated_genes":["SJAG_00933","SJAG_00576","SJAG_04000","SJAG_01249","SJAG_05398","SJAG_03456","SJAG_01043","SJAG_02699","SJAG_03563","SJAG_00852","SJAG_00230","SJAG_00721","SJAG_04642","SJAG_00655"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99860,96551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"},{"annotations":[104246,99336,97374,85759,105586,86990,102936,113151,102279,110934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031314"},{"annotations":[103290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031315"},{"annotations":[90727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097629"},{"annotations":[90728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_00655":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_02699":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04642":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of organelle membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic to organelle membrane","type":"narrow"}],"termid":"GO:0031312","terms_by_termid":{"GO:0031314":null,"GO:0031315":null,"GO:0097629":null,"GO:0097632":null,"GO:0099616":null}}


id: PBO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0001206"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: GO:0033379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in T cell secretory granule","termid":"GO:0033377"},{"relation_name":"part_of","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protease location in T cell secretory granule","synonyms":[{"name":"maintenance of protease localization in T cell secretory granule","type":"related"},{"name":"maintenance of protease localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of protease localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033379"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: PBO:0081381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 222","termid":"PBO:0081381"}


id: MOD:01020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioanisyl","termid":"MOD:01020"}


id: PBO:0066570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid like 3","termid":"PBO:0066570"}


id: PBO:0087133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in synthesis of 18S and 5.8S rRNAs; component of ribosomal small subunit (SSU) processome and 90S preribosome; required for pre-rRNA packaging and compaction of processome into dense terminal balls; part of Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription with role in biogenesis of large ribosomal subunit; binds single stranded tracts of U's; relocalizes from nucleolus to nucleus upon DNA replication stress","termid":"PBO:0087133"}


id: GO:0030197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions as a lubricant for an extracellular matrix, such as a mucous membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix constituent, lubricant activity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030197"}


id: PBO:0038447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine and arginine rich domain containing protein","termid":"PBO:0038447"}


id: PBO:0089773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein","termid":"PBO:0089773"}


id: GO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral B cell anergy","termid":"GO:0002917"}


id: PATO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group.","definition_xrefs":["wikipedia:en.wikipedia.org/wiki/Phosphorylated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated","termid":"PATO:0002220"}


id: PBO:0030187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_at_low_temperature","termid":"PBO:0030187"}


id: PBO:0113550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome associted, centrosome associated, gene expression","termid":"PBO:0113550"}


id: PR:O42964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iws1 gene.","definition_xrefs":["UniProtKB:O42964","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor iws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.16","synonyms":[{"name":"Spom972h-iws1","type":"exact"}],"termid":"PR:O42964"}


id: PBO:0048838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like pseudogene 1","termid":"PBO:0048838"}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: GO:0006447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the translation of certain mRNAs involved in iron metabolism; regulated by the concentration of iron.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by iron","termid":"GO:0006447"}


id: PBO:0108561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 and Mei2-associated RNA","termid":"PBO:0108561"}


id: GO:0140077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of lipoprotein transport.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:RPH","PMID:26501192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"positively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipoprotein transport","termid":"GO:0140077"}


id: GO:0102062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-alpha-santalene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.50","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-santalene synthase activity","secondary_identifiers":["RHEA:30463","MetaCyc:RXN-10567"],"termid":"GO:0102062"}


id: PBO:0056908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion inhibitory protein","termid":"PBO:0056908"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: MOD:00424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-pyridylethyl-L-cysteine.","definition_xrefs":["PubMed:11760118","DeltaMass:253","PubMed:626389","PubMed:8783016","Unimod:31#C","OMSSA:112","PubMed:8297018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-pyridylethyl-L-cysteine","synonyms":[{"name":"PECys","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-pyridinylethyl-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"},{"name":"spyridylethylc","type":"exact"},{"name":"vinylpyridine derivatized cysteine residue","type":"exact"}],"termid":"MOD:00424"}


id: PBO:0091508
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-TRNA Accumulation","termid":"PBO:0091508"}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:16935884","PMID:9442895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: PBO:0003798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHA domain protein Far10 (predicted)","termid":"PBO:0003798"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: GO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-acetoin + NAD+ = diacetyl + H+ + NADH. This reaction is catalyzed in the reverse direction.","definition_xrefs":["RHEA:22900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetoin dehydrogenase (NAD+) activity","termid":"GO:0019152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"diacetyl reductase ((R)-acetoin forming) (NAD+) activity","secondary_identifiers":["EC:1.1.1.303","KEGG_REACTION:R02855","MetaCyc:RXN-11036"],"synonyms":[{"name":"(R)-acetoin dehydrogenase activity","type":"related"}],"termid":"GO:0052587"}


id: PBO:0055752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA induced by HCV, regulator of SREBF1","termid":"PBO:0055752"}


id: PBO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORCS3 antisense RNA 1","termid":"PBO:0075339"}


id: GO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oleic acid","termid":"GO:0034201"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oleic acid","synonyms":[{"name":"cellular response to oleate","type":"exact"}],"termid":"GO:0071400"}


id: PBO:0082438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; CLB4 has a paralog, CLB3, that arose from the whole genome duplication","termid":"PBO:0082438"}


id: GO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermis development","synonyms":[{"name":"activation of epidermis development","type":"narrow"},{"name":"positive regulation of epidermal development","type":"exact"},{"name":"positive regulation of hypodermis development","type":"related"},{"name":"stimulation of epidermis development","type":"narrow"},{"name":"up regulation of epidermis development","type":"exact"},{"name":"up-regulation of epidermis development","type":"exact"},{"name":"upregulation of epidermis development","type":"exact"}],"termid":"GO:0045684"}


id: FYPO:0005476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of filamentous actin measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. The total actin level (globular and filamentous actin) may be normal or abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased filamentous actin level","synonyms":[{"name":"decreased accumulation of filamentous actin in cell","type":"related"},{"name":"decreased cellular F-actin level","type":"exact"},{"name":"decreased cellular filamentous actin level","type":"exact"},{"name":"decreased filamentous actin level during mitotic cell cycle","type":"related"},{"name":"decreased filamentous actin level during vegetative growth","type":"exact"},{"name":"reduced filamentous actin level","type":"exact"}],"termid":"FYPO:0005476"}


id: GO:0032685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of granulocyte macrophage colony-stimulating factor production","termid":"GO:0032645"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045424"],"synonyms":[{"name":"down regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of granulocyte macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of GM-CSF production","type":"exact"},{"name":"negative regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"negative regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032685"}


id: PBO:0058616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6748","termid":"PBO:0058616"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["UniProtKB:Q9P7L8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: PBO:0071295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 18","termid":"PBO:0071295"}


id: PBO:0054693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2102","termid":"PBO:0054693"}


id: PR:O43120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uap2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor U2AF-associated protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.02c","synonyms":[{"name":"Spom972h-uap2","type":"exact"},{"name":"cold sensitive U2 snRNA suppressor 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43120"}


id: PBO:0062778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 7 pseudogene","termid":"PBO:0062778"}


id: PBO:0004688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1 (predicted)","termid":"PBO:0004688"}


id: GO:0051992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + di-trans,poly-cis-undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol.","definition_xrefs":["EC:2.7.8.13","MetaCyc:PHOSNACMURPENTATRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016780"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity","secondary_identifiers":["RHEA:28386"],"termid":"GO:0051992"}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: PBO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 56","termid":"PBO:0070685"}


id: PBO:0056092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYL1 basic helix-loop-helix family member","termid":"PBO:0056092"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: GO:0046624
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90533,94036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of sphingolipids into, out of or within a cell, or between cells. Sphingolipids are a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sphingolipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9695890","Reactome:R-HSA-9843721"],"termid":"GO:0046624","terms_by_termid":{"GO:0140351":null}}


id: PBO:0030623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucosidase_activity","termid":"PBO:0030623"}


id: PBO:0066898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 198","termid":"PBO:0066898"}


id: PBO:0050311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 13","termid":"PBO:0050311"}


id: GO:1903442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoic acid stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","GOC:sl","PMID:23232760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoic acid","termid":"GO:1903442"}


id: GO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostacyclin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"prostacyclin receptor binding","synonyms":[{"name":"prostacyclin receptor ligand","type":"narrow"},{"name":"prostanoid IP receptor binding","type":"exact"}],"termid":"GO:0031869"}


id: PBO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit alpha","termid":"PBO:0051556"}


id: PATO:0001878
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's consisting of two curves, in opposite directions. S-shaped.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigmoid","synonyms":[{"name":"S-shaped","type":"exact"},{"name":"sigmoidal","type":"exact"}],"termid":"PATO:0001878"}


id: PBO:0040851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 5","termid":"PBO:0040851"}


id: GO:0007094
data:
  {"annotated_genes":["SJAG_01837","SJAG_04884","SJAG_03353","SJAG_02451","SJAG_00883","SJAG_01330","SJAG_01082","SJAG_04126","SJAG_02169","SJAG_04999","SJAG_02336","SJAG_03681","SJAG_01679","SJAG_01297","SJAG_04699","SJAG_03126","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86840,95530,97892,102392,105986,109861,110567,111615,112743],"is_not":false,"summary":null,"term":"GO:0007094"},{"annotations":[109857,86838,108035,103311,95682,99992,111966,110338,104333],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[90305],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112747],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[90306],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that delays mitotic sister chromatid separation and consequently the mitotic metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle. Spindle assembly checkpoint signaling begins with the activated Mph family kinase, and results in the inhibition of the Anaphase Promoting Complex and its activator Sleepy/Cdc20 by the mitotic checkpoint complex (MCC).","definition_xrefs":["GOC:mtg_cell_cycle","PMID:12360190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic metaphase/anaphase transition","termid":"GO:0045841"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"},{"relation_name":"is_a","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000070","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044810","GO:0072480","GO:1902420"],"synonyms":[{"name":"Dma1-dependent checkpoint","type":"narrow"},{"name":"Mad2-dependent checkpoint","type":"narrow"},{"name":"SAC-independent checkpoint","type":"narrow"},{"name":"mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint signalling","type":"exact"},{"name":"signal transduction involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signal transduction involved in SAC-independent checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic spindle assembly checkpoint","type":"exact"},{"name":"signaling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signaling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signaling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signaling pathway involved in SAC-independent checkpoint","type":"related"},{"name":"signalling cascade involved in Dma1-dependent checkpoint","type":"narrow"},{"name":"signalling cascade involved in SAC-independent checkpoint","type":"narrow"},{"name":"signalling pathway involved in Dma1-dependent checkpoint","type":"related"},{"name":"signalling pathway involved in SAC-independent checkpoint","type":"related"}],"termid":"GO:0007094","terms_by_termid":{"GO:0007094":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0073979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 4, pseudogene","termid":"PBO:0073979"}


id: PBO:0053356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 260","termid":"PBO:0053356"}


id: PBO:0074485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMYD3 antisense RNA 1","termid":"PBO:0074485"}


id: PBO:0074692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70B","termid":"PBO:0074692"}


id: PBO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisA","termid":"PBO:0013076"}


id: SO:0001184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence composed of peptide nucleic acid (CHEBI:48021), a chemical consisting of nucleobases bound to a backbone composed of repeating N-(2-aminoethyl)-glycine units linked by peptide bonds. The purine and pyrimidine bases are linked to the backbone by methylene carbonyl bonds.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNA","synonyms":[{"name":"peptide nucleic acid","type":"related"}],"termid":"SO:0001184"}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpent-2-enoyl-CoA hydratase activity (obsolete GO:0034867)","termid":"GO:0034867"}


id: PBO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Zeocin","termid":"PBO:0035955"}


id: GO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: deisopropyldeethylatrazine + H2O = 2-chloro-4-hydroxy-6-amino-1,3,5-triazine + NH3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete deisopropyldeethylatrazine hydrolase activity (obsolete GO:0018783)","termid":"GO:0018783"}


id: GO:0097419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cellular inclusion composed of numerous tau fibrils arranged in a disorderly array. Tau protein is a major component, though Pick bodies also contain ubiquitin, alpha-synuclein, and apolipoprotein E.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Pick body","termid":"GO:0097419"}


id: PBO:0070887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL15 pseudogene 19","termid":"PBO:0070887"}


id: PBO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly 2","termid":"PBO:0051861"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: PBO:0038524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 4","termid":"PBO:0038524"}


id: GO:1902743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lamellipodium organization.","definition_xrefs":["GO_REF:0000058","PMID:16054028","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"lamellipodium organization","termid":"GO:0097581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lamellipodium organization","termid":"GO:1902743"}


id: FYPO:0006602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the MPS1 barrier in the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:26201080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased replication fork arrest at mating-type locus","termid":"FYPO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased replication fork arrest at MPS1 barrier","synonyms":[{"name":"decreased replication fork arrest at MPS1 barrier during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at MPS1 barrier during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at MPS1 element","type":"exact"},{"name":"reduced replication fork arrest at MPS1 barrier","type":"exact"}],"termid":"FYPO:0006602"}


id: PBO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 68","termid":"PBO:0071227"}


id: PBO:0087864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of oleate genes; regulates genes involved in fatty acid utilization; zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source","termid":"PBO:0087864"}


id: PBO:0031488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle","termid":"PBO:0031488"}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: GO:0099025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic membrane (obsolete GO:0099025)","termid":"GO:0099025"}


id: PBO:0057329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520d","termid":"PBO:0057329"}


id: GO:1900908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin metabolic process","synonyms":[{"name":"regulation of olefin metabolism","type":"exact"}],"termid":"GO:1900908"}


id: PBO:0088683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT 0 complex subunit, sorting receptor for ubiquitinated membrane proteins, Hse1","termid":"PBO:0088683"}


