# terms

id: GO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from an atrial cardiomyocyte to an AV node cell. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gap junction channel activity involved in atrial cardiac muscle cell-AV node cell electrical coupling","synonyms":[{"name":"gap junction channel activity involved in atrial cardiomyocyte-AV node cell electrical coupling","type":"related"},{"name":"gap junction channel activity involved in atrial cardiomyocyte-atrioventricular node cell electrical coupling","type":"exact"}],"termid":"GO:0086076"}


id: PBO:0031848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_morphology","termid":"PBO:0031848"}


id: GO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["CL:0000187","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell migration","termid":"GO:0014812"}


id: SO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regional centromere is a large modular centromere found in fission yeast and higher eukaryotes. It consist of a central core region flanked by inverted inner and outer repeat regions.","definition_xrefs":["PMID:7502067","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere","synonyms":[{"name":"regional centromere","type":"exact"}],"termid":"SO:0001795"}


id: PBO:0086490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase, subunit of Coenzyme Q biosynthetic complexes; required for synthesis of wild-type levels of Coenzyme Q (ubiquinone); member of the short-chain dehydrogenase/reductase (SDR) superfamily; orthologous gene in some other fungi is fused to the COQ10 ortholog","termid":"PBO:0086490"}


id: GO:1903677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"regulation of cap-independent translational initiation","termid":"GO:1903677"}


id: GO:0015348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prostaglandin/thromboxane transporter activity (obsolete GO:0015348)","synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"exact"}],"termid":"GO:0015348"}


id: PBO:0051239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-49-1 (pseudogene)","termid":"PBO:0051239"}


id: GO:0008172
data:
  {"annotated_genes":["SJAG_04425","SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003871"},{"annotations":[94629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the sulfur atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02290":null,"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-209821"],"termid":"GO:0008172","terms_by_termid":{"GO:0003871":null,"GO:0008898":null}}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0088686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Iml1","termid":"PBO:0088686"}


id: PBO:0058712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6840","termid":"PBO:0058712"}


id: PBO:0026737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_polymerase_processivity_factor_activity","termid":"PBO:0026737"}


id: PBO:0069676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 953, pseudogene","termid":"PBO:0069676"}


id: GO:1990851
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing a secreted Wnt protein associated with its receptor, Frizzled (Fz), and co-receptor low density lipoprotein receptor-related protein 5 (LRP5) or LRP6.","definition_xrefs":["PMID:20093360","GOC:bf","GOC:PARL","PMID:11448771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Wnt-Frizzled-LRP5/6 complex","synonyms":[{"name":"Frizzled-LRP5/6 complex","type":"related"},{"name":"Fz/Wnt/LRP6 complex","type":"narrow"},{"name":"WNT-FZD-LRP5 complex","type":"narrow"},{"name":"WNT-FZD-LRP6 complex","type":"narrow"},{"name":"Wnt receptor complex","type":"broad"},{"name":"Wnt-FZD-LRP5/6 trimeric complex","type":"exact"},{"name":"Wnt-induced Frizzled-LRP5/6 complex","type":"related"},{"name":"Wnt.Fz.LRP ternary complex","type":"exact"}],"termid":"GO:1990851"}


id: GO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = O-D-glucosylnicotinate + UDP.","definition_xrefs":["GOC:tb","PMID:26116607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nicotinate-O-glucosyltransferase activity","termid":"GO:0090704"}


id: GO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac endothelial to mesenchymal trnasition.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:26857067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"positively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062000"}


id: GO:0070056
data:
  {"annotated_genes":["SJAG_04922","SJAG_00405","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94922,99012,114571],"is_not":false,"summary":null,"term":"GO:0070056"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane that extends to surround the spore nucleus; coated with specific proteins that are thought to play a role in prospore membrane organization.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005628"}],"interesting_parent_ids":["GO:0005575","GO:0005628"],"is_obsolete":false,"name":"prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane leading edge","type":"exact"}],"termid":"GO:0070056","terms_by_termid":{"GO:0070056":null}}


id: GO:0097616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12037568","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont type IV pilus-dependent motility","termid":"GO:0097615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of symbiont type IV pilus-dependent motility","synonyms":[{"name":"positive regulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097616"}


id: PBO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_before","termid":"PBO:0034325"}


id: PBO:0084600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL200C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL201C","termid":"PBO:0084600"}


id: PBO:0041870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 2","termid":"PBO:0041870"}


id: GO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.47.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433131"],"synonyms":[{"name":"low affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"low affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015361"}


id: GO:0071083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to the cell surface protein CD47 and the low-affinity immunoglobulin epsilon Fc receptor (FCER2).","definition_xrefs":["PMID:10037797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaV-beta3 integrin-CD47-FCER2 complex","synonyms":[{"name":"ITGAV-ITGB3-CD447-FCER2 complex","type":"narrow"}],"termid":"GO:0071083"}


id: GO:0071546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL2-TDRD1 module, a set of proteins that act in the primary piRNA pathway. The pi-body corresponds to the cementing material between mitochondria found in gonocytes.","definition_xrefs":["GOC:sp","PMID:20011505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pi-body","synonyms":[{"name":"intermitochondrial cement","type":"exact"}],"termid":"GO:0071546"}


id: PBO:0078280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 13-1","termid":"PBO:0078280"}


id: PBO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination","termid":"PBO:0031418"}


id: GO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of cell adhesion molecules that bind to carbohydrate via a lectin-like domain; integral membrane glycoproteins.","definition_xrefs":["ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete selectin (obsolete GO:0008337)","synonyms":[{"name":"selectin","type":"exact"}],"termid":"GO:0008337"}


id: GO:0034002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4R)-limonene + diphosphate.","definition_xrefs":["RHEA:10940","EC:4.2.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(R)-limonene synthase activity","secondary_identifiers":["MetaCyc:4.2.3.20-RXN","KEGG_REACTION:R06120"],"synonyms":[{"name":"(+)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (+)-(4R)-limonene-forming] activity","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [(+)-(R)-limonene-forming] activity","type":"related"}],"termid":"GO:0034002"}


id: PBO:0089097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog, unknown biological role","termid":"PBO:0089097"}


id: GO:1900656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of diorcinol biosynthetic process","termid":"GO:1900655"},{"relation_name":"negatively_regulates","term_name":"diorcinol biosynthetic process","termid":"GO:1900572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of diorcinol biosynthetic process","synonyms":[{"name":"down regulation of diorcinol anabolism","type":"exact"},{"name":"down regulation of diorcinol biosynthesis","type":"exact"},{"name":"down regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down regulation of diorcinol formation","type":"exact"},{"name":"down regulation of diorcinol synthesis","type":"exact"},{"name":"down-regulation of diorcinol anabolism","type":"exact"},{"name":"down-regulation of diorcinol biosynthesis","type":"exact"},{"name":"down-regulation of diorcinol biosynthetic process","type":"exact"},{"name":"down-regulation of diorcinol formation","type":"exact"},{"name":"down-regulation of diorcinol synthesis","type":"exact"},{"name":"downregulation of diorcinol anabolism","type":"exact"},{"name":"downregulation of diorcinol biosynthesis","type":"exact"},{"name":"downregulation of diorcinol biosynthetic process","type":"exact"},{"name":"downregulation of diorcinol formation","type":"exact"},{"name":"downregulation of diorcinol synthesis","type":"exact"},{"name":"inhibition of diorcinol anabolism","type":"exact"},{"name":"inhibition of diorcinol biosynthesis","type":"exact"},{"name":"inhibition of diorcinol biosynthetic process","type":"narrow"},{"name":"inhibition of diorcinol formation","type":"exact"},{"name":"inhibition of diorcinol synthesis","type":"exact"},{"name":"negative regulation of diorcinol anabolism","type":"exact"},{"name":"negative regulation of diorcinol biosynthesis","type":"exact"},{"name":"negative regulation of diorcinol formation","type":"exact"},{"name":"negative regulation of diorcinol synthesis","type":"exact"}],"termid":"GO:1900656"}


id: GO:0015574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of trehalose from one side of a membrane to the other. Trehalose is the disaccharide alpha-D-glucopyranosyl-alpha-D-glucopyranoside that acts of a reserve carbohydrate in certain fungi, algae and lichens.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"trehalose transmembrane transporter activity","secondary_identifiers":["GO:0015584","RHEA:17629"],"synonyms":[{"name":"trehalose permease activity","type":"exact"}],"termid":"GO:0015574"}


id: GO:0034498
data:
  {"annotated_genes":["SJAG_04219","SJAG_02750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111288,112496],"is_not":false,"summary":null,"term":"GO:0034498"}]},"cv_name":"biological_process","definition":"The directed movement of substances from early endosomes to the Golgi.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"},{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02750":null,"SJAG_04219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"early endosome to Golgi transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PGE to Golgi transport","type":"exact"},{"name":"post-Golgi endosome to Golgi transport","type":"exact"}],"termid":"GO:0034498","terms_by_termid":{"GO:0034498":null}}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: GO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial inner membrane (obsolete GO:0031305)","synonyms":[{"name":"integral to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031305"}


id: PBO:0038974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A3 receptor","termid":"PBO:0038974"}


id: PBO:0077121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMMDC1 divergent transcript","termid":"PBO:0077121"}


id: GO:1900758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-amino-acid oxidase activity","termid":"GO:1900757"},{"relation_name":"is_a","term_name":"negative regulation of primary amine oxidase activity","termid":"GO:1902283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of D-amino-acid oxidase activity","synonyms":[{"name":"down regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down regulation of new yellow enzyme","type":"related"},{"name":"down-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down-regulation of new yellow enzyme","type":"related"},{"name":"downregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"downregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"downregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"downregulation of new yellow enzyme","type":"related"},{"name":"inhibition of D-amino-acid oxidase activity","type":"narrow"},{"name":"inhibition of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"inhibition of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"inhibition of new yellow enzyme","type":"related"},{"name":"negative regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"negative regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"negative regulation of new yellow enzyme","type":"related"}],"termid":"GO:1900758"}


id: PBO:0081593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 518B","termid":"PBO:0081593"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: PBO:0076249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 polycomb repressive complex 2 subunit","termid":"PBO:0076249"}


id: GO:0008463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-methionine + H2O = L-methionine + formate.","definition_xrefs":["EC:3.5.1.31","RHEA:17781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"formylmethionine deformylase activity","secondary_identifiers":["MetaCyc:FORMYLMETHIONINE-DEFORMYLASE-RXN","KEGG_REACTION:R00653"],"synonyms":[{"name":"N-formyl-L-methionine amidohydrolase activity","type":"related"}],"termid":"GO:0008463"}


id: GO:0103066
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106161],"is_not":false,"summary":null,"term":"GO:0103066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.1.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN66-18"],"termid":"GO:0103066","terms_by_termid":{"GO:0103066":null}}


id: GO:1900039
data:
  {"annotated_genes":["SJAG_03345","SJAG_01585"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85386,112464],"is_not":false,"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to hypoxia.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to hypoxia","termid":"GO:1900037"},{"relation_name":"positively_regulates","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01585":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cellular response to hypoxia","type":"related"},{"name":"activation of cellular response to hypoxic stress","type":"exact"},{"name":"activation of cellular response to lowered oxygen tension","type":"exact"},{"name":"positive regulation of cellular response to hypoxic stress","type":"exact"},{"name":"positive regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up regulation of cellular response to hypoxia","type":"related"},{"name":"up regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"up-regulation of cellular response to hypoxia","type":"related"},{"name":"up-regulation of cellular response to hypoxic stress","type":"exact"},{"name":"up-regulation of cellular response to lowered oxygen tension","type":"exact"},{"name":"upregulation of cellular response to hypoxia","type":"related"},{"name":"upregulation of cellular response to hypoxic stress","type":"exact"},{"name":"upregulation of cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:1900039","terms_by_termid":{"GO:1900039":null}}


id: FYPO:0000060
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115231],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate during vegetative growth","type":"exact"},{"name":"mononucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0064258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A6","termid":"PBO:0064258"}


id: GO:0120326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Penetration by a symbiont into a host organism via an appressorium. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:krc","GOC:ach","PMID:14731267","PMID:22589729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium-mediated entry into host","synonyms":[{"name":"appressorium-mediated host invasion","type":"exact"},{"name":"appressorium-mediated host penetration","type":"exact"},{"name":"appressorium-mediated invasion into host","type":"exact"},{"name":"appressorium-mediated penetration into host","type":"exact"}],"termid":"GO:0120326"}


id: PR:Q9URU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication ATP-dependent helicase/nuclease DNA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10887:SF14","OMA:SCHPO03776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATP-dependent helicase/nuclease dna2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.04c","secondary_identifiers":["UniProtKB:Q9URU2"],"synonyms":[{"name":"Spom972h-DNA2","type":"exact"}],"termid":"PR:Q9URU2"}


id: GO:0003909
data:
  {"annotated_genes":["SJAG_02527","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88661],"is_not":false,"summary":null,"term":"GO:0003909"},{"annotations":[109973,88660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"DNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782227","Reactome:R-HSA-73931","Reactome:R-HSA-5651805","Reactome:R-HSA-5693604","Reactome:R-HSA-69173","Reactome:R-HSA-175258","Reactome:R-HSA-5358592","Reactome:R-HSA-5651789","Reactome:R-HSA-174456","Reactome:R-HSA-5687675","Reactome:R-HSA-5649734","Reactome:R-HSA-5690997"],"termid":"GO:0003909","terms_by_termid":{"GO:0003909":null,"GO:0003910":null}}


id: GO:1903333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein folding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of protein folding","termid":"GO:1903332"},{"relation_name":"negatively_regulates","term_name":"protein folding","termid":"GO:0006457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"negatively_regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"negative regulation of protein folding","synonyms":[{"name":"down regulation of alpha-tubulin folding","type":"narrow"},{"name":"down regulation of beta-tubulin folding","type":"narrow"},{"name":"down regulation of chaperone activity","type":"related"},{"name":"down regulation of chaperonin ATPase activity","type":"related"},{"name":"down regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"down regulation of co-chaperone activity","type":"related"},{"name":"down regulation of co-chaperonin activity","type":"related"},{"name":"down regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"down regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"down regulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"down regulation of protein folding","type":"exact"},{"name":"down-regulation of alpha-tubulin folding","type":"narrow"},{"name":"down-regulation of beta-tubulin folding","type":"narrow"},{"name":"down-regulation of chaperone activity","type":"related"},{"name":"down-regulation of chaperonin ATPase activity","type":"related"},{"name":"down-regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"down-regulation of co-chaperone activity","type":"related"},{"name":"down-regulation of co-chaperonin activity","type":"related"},{"name":"down-regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"down-regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"down-regulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"down-regulation of protein folding","type":"exact"},{"name":"downregulation of alpha-tubulin folding","type":"narrow"},{"name":"downregulation of beta-tubulin folding","type":"narrow"},{"name":"downregulation of chaperone activity","type":"related"},{"name":"downregulation of chaperonin ATPase activity","type":"related"},{"name":"downregulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"downregulation of co-chaperone activity","type":"related"},{"name":"downregulation of co-chaperonin activity","type":"related"},{"name":"downregulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"downregulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"downregulation of protein complex assembly, multichaperone pathway","type":"related"},{"name":"downregulation of protein folding","type":"exact"},{"name":"inhibition of alpha-tubulin folding","type":"narrow"},{"name":"inhibition of beta-tubulin folding","type":"narrow"},{"name":"inhibition of chaperone activity","type":"related"},{"name":"inhibition of chaperonin ATPase activity","type":"related"},{"name":"inhibition of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"inhibition of co-chaperone activity","type":"related"},{"name":"inhibition of co-chaperonin activity","type":"related"},{"name":"inhibition of glycoprotein-specific chaperone activity","type":"related"},{"name":"inhibition of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"inhibition of protein complex assembly, multichaperone pathway","type":"related"},{"name":"inhibition of protein folding","type":"narrow"},{"name":"negative regulation of alpha-tubulin folding","type":"narrow"},{"name":"negative regulation of beta-tubulin folding","type":"narrow"},{"name":"negative regulation of chaperone activity","type":"related"},{"name":"negative regulation of chaperonin ATPase activity","type":"related"},{"name":"negative regulation of chaperonin-mediated tubulin folding","type":"narrow"},{"name":"negative regulation of co-chaperone activity","type":"related"},{"name":"negative regulation of co-chaperonin activity","type":"related"},{"name":"negative regulation of glycoprotein-specific chaperone activity","type":"related"},{"name":"negative regulation of non-chaperonin molecular chaperone ATPase activity","type":"related"},{"name":"negative regulation of protein complex assembly, multichaperone pathway","type":"related"}],"termid":"GO:1903333"}


id: GO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytochrome c L-lysine = S-adenosyl-L-homocysteine + cytochrome c N6-methyl-L-lysine. This is the addition of a methyl group to the N6 atom of a lysine residue in cytochrome c.","definition_xrefs":["EC:2.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"[cytochrome c]-lysine N-methyltransferase activity","secondary_identifiers":["RHEA:24312","MetaCyc:2.1.1.59-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine 6-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:cytochrome c-L-lysine N6-methyltransferase activity","type":"related"},{"name":"cytochrome c (lysine) methyltransferase activity","type":"related"},{"name":"cytochrome c methyltransferase activity","type":"related"},{"name":"cytochrome c-lysine N-methyltransferase activity","type":"related"},{"name":"cytochrome c-specific protein methylase III activity","type":"related"},{"name":"cytochrome c-specific protein-lysine methyltransferase activity","type":"related"}],"termid":"GO:0000277"}


id: PBO:0041138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotinidase","termid":"PBO:0041138"}


id: GO:0015832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete holin (obsolete GO:0015832)","synonyms":[{"name":"holin","type":"exact"}],"termid":"GO:0015832"}


id: SO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_methylcytidine","secondary_identifiers":["RNAMOD:020"],"synonyms":[{"name":"3-methylcytidine","type":"exact"},{"name":"m3C","type":"exact"},{"name":"three methylcytidine","type":"exact"}],"termid":"SO:0001281"}


id: GO:1905010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GO_REF:0000058","PMID:7499219","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"positively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-lysine import across plasma membrane","synonyms":[{"name":"activation of L-lysine import into cell","type":"narrow"},{"name":"positive regulation of L-lysine import into cell","type":"exact"},{"name":"up regulation of L-lysine import into cell","type":"exact"},{"name":"up-regulation of L-lysine import into cell","type":"exact"},{"name":"upregulation of L-lysine import into cell","type":"exact"}],"termid":"GO:1905010"}


id: PBO:0066307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 1","termid":"PBO:0066307"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: GO:0047002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinitol + NAD+ = L-ribulose + H+ + NADH.","definition_xrefs":["RHEA:21356","EC:1.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.13-RXN","KEGG_REACTION:R02441"],"synonyms":[{"name":"L-arabinitol 2-dehydrogenase (ribulose forming) activity","type":"exact"}],"termid":"GO:0047002"}


id: PBO:0042219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Q","termid":"PBO:0042219"}


id: GO:0048002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen","synonyms":[{"name":"antigen presentation, peptide antigen","type":"exact"},{"name":"peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0048002"}


id: PBO:0045746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 3, pseudogene","termid":"PBO:0045746"}


id: PBO:0081651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 576","termid":"PBO:0081651"}


id: GO:0099563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modifies the structure/morphology of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure","synonyms":[{"name":"synapse remodelling","type":"exact"}],"termid":"GO:0099563"}


id: PBO:0055224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2650","termid":"PBO:0055224"}


id: GO:1904928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in a canonical Wnt signaling pathway.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:24431302","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in canonical Wnt signaling pathway (obsolete GO:1904928)","synonyms":[{"name":"Wnt co-receptor activity, canonical signaling","type":"exact"},{"name":"Wnt co-receptor, canonical pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt receptor signaling pathway","type":"exact"},{"name":"coreceptor activity involved in canonical Wnt-activated signaling pathway","type":"exact"},{"name":"coreceptor activity involved in frizzled-1 receptor signaling pathway","type":"narrow"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway via beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway through beta-catenin","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt receptor signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in canonical Wnt-activated signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in frizzled-1 receptor signaling pathway","type":"related"}],"termid":"GO:1904928"}


id: PBO:0038831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 4","termid":"PBO:0038831"}


id: GO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of ubiquitin ligase activity that contributes to the mitotic cell cycle.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle (obsolete GO:0051439)","synonyms":[{"name":"mitotic APC regulator","type":"narrow"},{"name":"mitotic SCF complex regulator","type":"narrow"},{"name":"mitotic anaphase-promoting complex regulator","type":"narrow"},{"name":"mitotic ubiquitin ligase regulator","type":"related"},{"name":"mitotic ubiquitin-protein ligase regulator","type":"related"},{"name":"regulation of ubiquitin ligase activity during mitotic cell cycle","type":"related"},{"name":"regulation of ubiquitin-protein ligase activity during mitotic cell cycle","type":"related"}],"termid":"GO:0051439"}


id: GO:0098518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide phosphatase activity (obsolete GO:0098518)","termid":"GO:0098518"}


id: PBO:0083318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF HXK1/YFR053C","termid":"PBO:0083318"}


id: PBO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase","termid":"PBO:0000729"}


id: PBO:0055291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2718","termid":"PBO:0055291"}


id: PBO:0084020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I; involved in GPI anchor biosynthesis, requires Pbn1p for function; homolog of mammalian PIG-M","termid":"PBO:0084020"}


id: PATO:0001417
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's duration which has irregular start and/or end times.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular duration","termid":"PATO:0001417"}


id: GO:0070948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a target cell, the directed killing of a target cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"neutrophil mediated cytotoxicity","termid":"GO:0070942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated cytotoxicity","synonyms":[{"name":"regulation of neutrophil mediated cell killing","type":"exact"}],"termid":"GO:0070948"}


id: PBO:0034700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading factor (adherin) Mis4","termid":"PBO:0034700"}


id: PBO:0075975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 1","termid":"PBO:0075975"}


id: PBO:0038543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD15 antisense RNA 1","termid":"PBO:0038543"}


id: GO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3-sulfino-L-alanine (cysteine sulfinate).","definition_xrefs":["GOC:al","PMID:8346915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"3-sulfino-L-alanine binding","synonyms":[{"name":"cysteine sulfinate binding","type":"exact"}],"termid":"GO:0036127"}


id: GO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fatty acid","termid":"GO:0070542"}


id: SO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of ribosome entry site, specific to Eukaryotic organisms that overlaps part of both 5' UTR and CDS sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome_entry_site","termid":"SO:0000139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kozak_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Kozak_consensus_sequence"],"synonyms":[{"name":"kozak consensus","type":"exact"},{"name":"kozak consensus sequence","type":"exact"},{"name":"kozak sequence","type":"exact"}],"termid":"SO:0001647"}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["PMID:11809816","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: PBO:0109406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ontology_root_term","termid":"PBO:0109406"}


id: PBO:0087465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a nuclear complex with Noc2p and pre-replicative complexes; the Noc2p-Noc3p complex binds to 66S ribosomal precursors to mediate their maturation and intranuclear transport; binds to chromatin at active replication origins, and is required for pre-RC formation and maintenance during DNA replication licensing","termid":"PBO:0087465"}


id: PBO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 3","termid":"PBO:0050083"}


id: SO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together transcript regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_fusion","synonyms":[{"name":"transcript fusion","type":"exact"}],"termid":"SO:0001886"}


id: PBO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2D","termid":"PBO:0061719"}


id: GO:1900545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900545)","synonyms":[{"name":"regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900545"}


id: PBO:0061218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9","termid":"PBO:0061218"}


id: PBO:0086991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0086991"}


id: PBO:0053766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1011","termid":"PBO:0053766"}


id: PBO:0073748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 4","termid":"PBO:0073748"}


id: PBO:0077718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 2","termid":"PBO:0077718"}


id: GO:0015081
data:
  {"annotated_genes":["SJAG_04167","SJAG_04616","SJAG_01541"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[108428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[85445,92844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sodium ions (Na+) from one side of a membrane to the other.","definition_xrefs":["RHEA:34963","GOC:ai","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0022816"],"synonyms":[{"name":"sodium transporter activity","type":"exact"}],"termid":"GO:0015081","terms_by_termid":{"GO:0008554":null,"GO:0015385":null,"GO:0140679":null}}


id: PATO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000162 absolute rate (obsolete PATO:0000162)","termid":"PATO:0000162"}


id: FYPO:0007300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation does not occur. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein aggregate center formation","termid":"FYPO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein aggregate center formation","synonyms":[{"name":"abolished PAC formation","type":"exact"},{"name":"abolished protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abolished protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abolished protein aggregate centre formation","type":"exact"},{"name":"protein aggregate center formation abolished","type":"exact"}],"termid":"FYPO:0007300"}


id: GO:0031337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"positive regulation of sulfur amino acid metabolic process","synonyms":[{"name":"activation of sulfur amino acid metabolic process","type":"narrow"},{"name":"positive regulation of sulfur amino acid metabolism","type":"exact"},{"name":"stimulation of sulfur amino acid metabolic process","type":"narrow"},{"name":"up regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"up-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"upregulation of sulfur amino acid metabolic process","type":"exact"}],"termid":"GO:0031337"}


id: GO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052446)","synonyms":[{"name":"modulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"modulation by organism of symbiont defensive cell wall thickening","type":"related"}],"termid":"GO:0052446"}


id: PBO:0068605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 56, pseudogene","termid":"PBO:0068605"}


id: PBO:0085132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in the early steps of 35S rRNA processing; interacts with Faf1p; member of a transcriptionally co-regulated set of genes called the RRB regulon; essential gene","termid":"PBO:0085132"}


id: MOD:01713
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01713"}


id: PBO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.153","termid":"PBO:0004354"}


id: PBO:0017097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family Schizosaccharomyces specific protein Mug170","termid":"PBO:0017097"}


id: PBO:0080862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 3","termid":"PBO:0080862"}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: GO:2000780
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"negative regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000780","terms_by_termid":{"GO:2001033":null}}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: GO:0047508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-citramalate = 2-methylmaleate + H2O.","definition_xrefs":["EC:4.2.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-2-methylmalate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03896"],"synonyms":[{"name":"(-)-citramalate hydro-lyase activity","type":"related"},{"name":"(R)-2-methylmalate hydro-lyase (2-methylmaleate-forming)","type":"related"},{"name":"(R)-2-methylmalate hydro-lyase activity","type":"related"},{"name":"citraconase activity","type":"related"},{"name":"citraconate hydratase activity","type":"related"},{"name":"citramalate hydro-lyase activity","type":"related"}],"termid":"GO:0047508"}


id: GO:0070670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-4","synonyms":[{"name":"response to IL-4","type":"exact"}],"termid":"GO:0070670"}


id: PBO:0056145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M6PR pseudogene 1","termid":"PBO:0056145"}


id: PBO:0080612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 46","termid":"PBO:0080612"}


id: PBO:0050185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 2","termid":"PBO:0050185"}


id: PBO:0048157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 3","termid":"PBO:0048157"}


id: PBO:0029732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aculeacin_A","termid":"PBO:0029732"}


id: GO:0051273
data:
  {"annotated_genes":["SJAG_04483","SJAG_01453","SJAG_03646","SJAG_02446","SJAG_02192","SJAG_04668","SJAG_04509","SJAG_00771","SJAG_02590","SJAG_04666","SJAG_00610","SJAG_04462","SJAG_04073","SJAG_01290","SJAG_05001","SJAG_01288","SJAG_01835","SJAG_05285","SJAG_00218","SJAG_03123","SJAG_03587","SJAG_00876","SJAG_02222","SJAG_01171","SJAG_01787","SJAG_03705","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98552,112619,86711,90321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[90569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[84210,103860,105380,87686,109241,111884,102177,87696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[104691,98735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[104149,91208,98041,98040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070879"},{"annotations":[88515],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[88519,83657],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84037],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[86886,88504,113952,98942,101421,88521],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan metabolism","type":"exact"}],"termid":"GO:0051273","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0051274":null,"GO:0060635":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0057004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 98","termid":"PBO:0057004"}


id: PBO:0051660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internexin neuronal intermediate filament protein alpha","termid":"PBO:0051660"}


id: PBO:0066165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 2","termid":"PBO:0066165"}


id: PR:Q9P7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.14c gene.","definition_xrefs":["UniProtKB:Q9P7M4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPAP27G11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.14c","synonyms":[{"name":"Spom972h-SPAP27G11.14c","type":"exact"}],"termid":"PR:Q9P7M4"}


id: PBO:0039002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"afadin, adherens junction formation factor","termid":"PBO:0039002"}


id: PBO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 2","termid":"PBO:0047494"}


id: GO:0061667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of URM1 to a substrate protein via the reaction X-URM1 + S = X + S-URM1, where X is either an E2 or E3 enzyme, the X-URM1 linkage is a thioester bond, and the S-URM1 linkage is an isopeptide bond between the C-terminal amino acid of URM1 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824","GO:0019787","GO:0140096"],"is_obsolete":false,"name":"URM1 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061667"}


id: MOD:01877
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-arginine residue to 2-(4-guanidinobutanoyl)-5-hydroxyimidazole-4-carbothionic acid.","definition_xrefs":["PubMed:20961038","RESID:AA0553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Cys)","termid":"MOD:01883"},{"relation_name":"is_a","term_name":"crosslinked L-arginine residue","termid":"MOD:02041"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(4-guanidinobutanoyl)-5-hydroxyimidazole-4-carbothionic acid","synonyms":[{"name":"(4Z)-2-(4-guanidinobutanoyl)-5-oxo-4-(sulfanylmethylidene)-4,5-dihydro-1H-imidazole","type":"exact"},{"name":"2-(4-guanidinobutanoyl)-5-hydroxy-1H-imidazole-4-carbothioic O-acid","type":"exact"},{"name":"2-(4-guanidinobutanoyl)-5-hydroxy-4-thioformyl-1H-imidazole [tautomer]","type":"exact"},{"name":"2-(4-guanidinobutanoyl)-5-hydroxyimidazole-4-carbothionic acid","type":"exact"},{"name":"CROSSLNK 2-(4-guanidinobutanoyl)-5-hydroxyimidazole-4-carbothionic acid (Arg-Cys)","type":"exact"}],"termid":"MOD:01877"}


id: GO:0042910
data:
  {"annotated_genes":["SJAG_03363","SJAG_03951","SJAG_05213","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92597,113087],"is_not":false,"summary":null,"term":"GO:0042910"},{"annotations":[92176,113996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"xenobiotic transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015559","Reactome:R-HSA-5625574","Reactome:R-HSA-597628","GO:0015239","GO:0015238","GO:0015564","GO:0090484"],"synonyms":[{"name":"drug transmembrane transporter activity","type":"related"},{"name":"drug transporter activity","type":"related"},{"name":"multidrug efflux pump activity","type":"related"},{"name":"multidrug transporter activity","type":"related"},{"name":"multidrug, alkane resistant pump activity","type":"related"},{"name":"xenobiotic transporter activity","type":"related"}],"termid":"GO:0042910","terms_by_termid":{"GO:0008559":null,"GO:0042910":null}}


id: PBO:0081632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 561","termid":"PBO:0081632"}


id: PBO:0086330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with WD-40 repeats involved in rRNA processing; associates with rDNA chromatin in H4-tail-dependent manner; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily","termid":"PBO:0086330"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: GO:1903665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asexual reproduction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24390142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual reproduction","termid":"GO:1903664"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"asexual reproduction","termid":"GO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual reproduction","synonyms":[{"name":"down regulation of asexual reproduction","type":"exact"},{"name":"down-regulation of asexual reproduction","type":"exact"},{"name":"downregulation of asexual reproduction","type":"exact"},{"name":"inhibition of asexual reproduction","type":"narrow"}],"termid":"GO:1903665"}


id: PBO:0057075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 154","termid":"PBO:0057075"}


id: FYPO:0003070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a single-stranded DNA 5'-3' exodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal single-stranded DNA 5'-3' exodeoxyribonuclease activity","termid":"FYPO:0003070"}


id: GO:1990151
data:
  {"annotated_genes":["SJAG_01196","SJAG_03915","SJAG_02392","SJAG_00851","SJAG_01373","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91955,87073],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903067"},{"annotations":[87400,112253,110117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[99847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at the cell tip.","definition_xrefs":["PMID:22768263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00851":null,"SJAG_01196":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03011":null,"SJAG_03915":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to cell tip","type":"exact"}],"termid":"GO:1990151","terms_by_termid":{"GO:0099117":null,"GO:1903067":null,"GO:1990896":null}}


id: PBO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Sfr1 foci in rhp54 delta cells","termid":"PBO:0002175"}


id: PBO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 29","termid":"PBO:0072098"}


id: FYPO:0005544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abnormal.","definition_xrefs":["PMID:27082518","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell division site plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to plasma membrane division site during vegetative growth","type":"exact"}],"termid":"FYPO:0005544"}


id: PBO:0068623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 3, pseudogene","termid":"PBO:0068623"}


id: PBO:0046130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H","termid":"PBO:0046130"}


id: GO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of acetylcholine from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["Wikipedia:Cholinergic","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, cholinergic","synonyms":[{"name":"cholinergic synaptic transmission","type":"exact"}],"termid":"GO:0007271"}


id: PBO:0058294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4668","termid":"PBO:0058294"}


id: GO:0009719
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048","SJAG_01805","SJAG_04183","SJAG_04332","SJAG_04140","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89910,107277,86122,112750,98480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[98493,90651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0009719","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0033675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded vesicle found near the apical, or pericanalicular, membrane of a hepatocyte; contains proteins involved in bile salt transport and other fluid and solute transport processes.","definition_xrefs":["PMID:15763347","PMID:9790571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"pericanalicular vesicle","termid":"GO:0033675"}


id: GO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication and chromosome cycle (obsolete GO:0000067)","synonyms":[{"name":"DNA replication and chromosome cycle","type":"exact"}],"termid":"GO:0000067"}


id: PBO:0071306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 29","termid":"PBO:0071306"}


id: GO:0140049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocardial cushion to mesenchymal transition.","definition_xrefs":["PMID:21778427","GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"regulates","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140049"}


id: GO:0030713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of ovarian follicle cells to create the interfollicular stalks that connect the egg chambers of progressive developmental stages. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber stalk formation","termid":"GO:0030713"}


id: PBO:0030175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-slow_cell_population_growth_during_recovery_from_stationary_phase","termid":"PBO:0030175"}


id: FYPO:0006521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid cohesion is abnormal. Mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle.","definition_xrefs":["GO:0007064","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid cohesion","synonyms":[{"name":"abnormal mitotic chromosome cohesion","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006521"}


id: GO:1904756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GO_REF:0000058","PMID:17535251","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"negatively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of gut granule assembly","synonyms":[{"name":"down regulation of gut granule assembly","type":"exact"},{"name":"down regulation of gut granule biogenesis","type":"exact"},{"name":"down regulation of gut granule formation","type":"exact"},{"name":"down-regulation of gut granule assembly","type":"exact"},{"name":"down-regulation of gut granule biogenesis","type":"exact"},{"name":"down-regulation of gut granule formation","type":"exact"},{"name":"downregulation of gut granule assembly","type":"exact"},{"name":"downregulation of gut granule biogenesis","type":"exact"},{"name":"downregulation of gut granule formation","type":"exact"},{"name":"inhibition of gut granule assembly","type":"narrow"},{"name":"inhibition of gut granule biogenesis","type":"narrow"},{"name":"inhibition of gut granule formation","type":"narrow"},{"name":"negative regulation of gut granule biogenesis","type":"exact"},{"name":"negative regulation of gut granule formation","type":"exact"}],"termid":"GO:1904756"}


id: MOD:00038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.","definition_xrefs":["PubMed:3734192","RESID:AA0029","PubMed:2400108","PubMed:4343807","ChEBI:16889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-proline","synonyms":[{"name":"(2S,3S)-3-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"3-hydroxy-L-proline","type":"exact"},{"name":"3-hydroxylated L-proline","type":"exact"},{"name":"3-trans-hydroxy-L-proline","type":"exact"},{"name":"3HyPro","type":"exact"},{"name":"L-threo-3-hydroxyproline","type":"exact"},{"name":"MOD_RES 3-hydroxyproline","type":"exact"},{"name":"beta-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00038"}


id: GO:0047626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + H2O = S-methyl-5'-thioadenosine + L-homoserine + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosylmethionine hydrolase activity (obsolete GO:0047626)","synonyms":[{"name":"adenosyl methionine hydrolase activity","type":"exact"}],"termid":"GO:0047626"}


id: GO:0022867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables transfer of two electrons across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:5.A"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane 2-electron transfer carrier (obsolete GO:0022867)","synonyms":[{"name":"transmembrane two-electron transfer carrier","type":"exact"}],"termid":"GO:0022867"}


id: PR:O60098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC14F5.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14F5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.01","synonyms":[{"name":"Spom972h-SPBC14F5.01","type":"exact"}],"termid":"PR:O60098"}


id: FYPO:0006259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the mitotic spindle is normal (i.e. indistinguishable from wild type) during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle morphology","termid":"FYPO:0007106"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle length during metaphase","synonyms":[{"name":"normal mitotic spindle length during metaphase during vegetative growth","type":"exact"},{"name":"normal spindle length during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal spindle length during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006259"}


id: PBO:0076544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine aminotransferase","termid":"PBO:0076544"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: GO:2000242
data:
  {"annotated_genes":["SJAG_03529","SJAG_01330","SJAG_02426","SJAG_04682","SJAG_00990","SJAG_04312","SJAG_01699","SJAG_04126","SJAG_02773","SJAG_00526","SJAG_03438","SJAG_04026","SJAG_01680","SJAG_01515","SJAG_03327","SJAG_01254","SJAG_03081","SJAG_02592","SJAG_02444","SJAG_02771","SJAG_01401","SJAG_02266","SJAG_04140","SJAG_02723","SJAG_01311","SJAG_04280","SJAG_01837","SJAG_03854","SJAG_00266","SJAG_00975","SJAG_00145","SJAG_00600","SJAG_02481","SJAG_01754","SJAG_00472","SJAG_01084","SJAG_01082","SJAG_02921","SJAG_03048","SJAG_01919","SJAG_02730","SJAG_00364","SJAG_04259","SJAG_04394","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110564,102390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[87534,102688,112128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[110328,102689,85189,112129,76907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[112740,97891,102391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[97717,92490,112635,88191,98463,89307,84344,84944,100987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031138"},{"annotations":[91262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[112075,107639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[102726,87514,90475,102922,89021,97942,112140,111591,105092,100586,102565,84345,110537,90334,96634,101978,101885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"},{"annotations":[107275,112455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[94793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[89418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[104050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[109862],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97430],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"negatively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01837":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02771":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_03854":null,"SJAG_04026":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000242","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0033315":null,"GO:0033316":null,"GO:0045128":null,"GO:0051447":null,"GO:0051598":null,"GO:0075297":null,"GO:0090029":null,"GO:0110031":null,"GO:0140538":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0043488
data:
  {"annotated_genes":["SJAG_04407","SJAG_00343","SJAG_00670","SJAG_03179","SJAG_05694","SJAG_04084","SJAG_04818","SJAG_04321","SJAG_05322","SJAG_00391","SJAG_04427","SJAG_01191","SJAG_02573","SJAG_01521","SJAG_00686","SJAG_01818","SJAG_04825","SJAG_02239","SJAG_03113","SJAG_03886","SJAG_04153","SJAG_01625","SJAG_00854","SJAG_03597","SJAG_03876","SJAG_05014","SJAG_16457","SJAG_03696","SJAG_04880","SJAG_00966","SJAG_02370","SJAG_01944","SJAG_04350","SJAG_04824","SJAG_04006","SJAG_02213","SJAG_04946","SJAG_02622","SJAG_02036","SJAG_01053","SJAG_02808","SJAG_03883","SJAG_03157","SJAG_00759","SJAG_03745","SJAG_05010","SJAG_00285","SJAG_02383","SJAG_02540","SJAG_00797","SJAG_01910","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84547,113342],"is_not":false,"summary":null,"term":"GO:0043488"},{"annotations":[114351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[77685,86313,96189,114352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[105962,106011,108077,102210,87653,109549],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[92354,85610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[114338,92018,98176,102536,103536,100490,111504,111951,101336,89168,88345,93353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[94161,100493,94245,85825,111210,92021,114341,96019,89171,101339,109400,107148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[88035,91614,85915,88095,105279,94614,86897,112676,99124,88691,111717,90441,88598,113224,89506],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[86316,87626,85928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"}]},"cv_name":"biological_process","definition":"Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA stability","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043488","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:1990074":null,"GO:2000815":null}}


id: GO:0062093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective autophagy process in which a damaged lysosome is degraded by macroautophagy.","definition_xrefs":["PMID:28743755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"lysophagy","termid":"GO:0062093"}


id: FYPO:0002385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002385"}


id: GO:0016602
data:
  {"annotated_genes":["SJAG_05247","SJAG_04607","SJAG_00698","SJAG_01062"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89814,100349,105766,107953],"is_not":false,"summary":null,"term":"GO:0016602"}]},"cv_name":"cellular_component","definition":"A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.","definition_xrefs":["PMID:7828851","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_04607":null,"SJAG_05247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"CCAAT-binding factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CBF complex","type":"related"},{"name":"NF-Y transcription factor complex","type":"related"},{"name":"nuclear transcription factor Y complex","type":"related"}],"termid":"GO:0016602","terms_by_termid":{"GO:0016602":null}}


id: GO:0051051
data:
  {"annotated_genes":["SJAG_03631","SJAG_03970","SJAG_03581","SJAG_00296","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87322,109435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[90685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[84229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[84230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[101886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[84231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"negatively_regulates","term_name":"transport","termid":"GO:0006810"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01311":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transport","type":"exact"},{"name":"down-regulation of transport","type":"exact"},{"name":"downregulation of transport","type":"exact"},{"name":"inhibition of transport","type":"narrow"}],"termid":"GO:0051051","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: GO:0102415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-3-gentiobioside + UDP-alpha-D-glucose = quercetin-3-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete quercetin gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102415)","termid":"GO:0102415"}


id: PBO:0042592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 5","termid":"PBO:0042592"}


id: PBO:0046798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor III, tissue factor","termid":"PBO:0046798"}


id: GO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"serotonin binding","synonyms":[{"name":"5-hydroxytryptamine binding","type":"exact"}],"termid":"GO:0051378"}


id: PBO:0029447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate-ammonia_ligase_activity","termid":"PBO:0029447"}


id: GO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-ornithine = L-proline + NH4.","definition_xrefs":["EC:4.3.1.12","RHEA:24368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ornithine cyclodeaminase activity","secondary_identifiers":["KEGG_REACTION:R00671","MetaCyc:ORNITHINE-CYCLODEAMINASE-RXN"],"synonyms":[{"name":"L-ornithine ammonia-lyase (cyclizing)","type":"related"},{"name":"L-ornithine ammonia-lyase (cyclizing; L-proline-forming)","type":"related"},{"name":"OCD activity","type":"related"},{"name":"ornithine cyclase (deaminating) activity","type":"related"},{"name":"ornithine cyclase activity","type":"related"}],"termid":"GO:0008473"}


id: GO:0102486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + 2 H2O = dCMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dCTP phosphohydrolase activity (obsolete GO:0102486)","termid":"GO:0102486"}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: PBO:0079751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 2","termid":"PBO:0079751"}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: PBO:0110317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 5'-cap (guanine-N7-)-methyltransferase Pcm1","termid":"PBO:0110317"}


id: SO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A methylated deoxy-cytosine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_DNA_base_feature","termid":"SO:0000306"},{"relation_name":"is_a","term_name":"modified_cytosine","termid":"SO:0001963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_cytosine","synonyms":[{"name":"methylated C","type":"exact"},{"name":"methylated cytosine","type":"exact"},{"name":"methylated cytosine base","type":"exact"},{"name":"methylated cytosine residue","type":"exact"},{"name":"methylated_C","type":"exact"}],"termid":"SO:0000114"}


id: PBO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase(predicted)","termid":"PBO:0000166"}


id: PBO:0050775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histatin 3","termid":"PBO:0050775"}


id: PBO:0089239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit","termid":"PBO:0089239"}


id: PBO:0109814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, vesicle-mediated transport factor","termid":"PBO:0109814"}


id: MOD:00209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["PubMed:3181159","RESID:AA0204#SER","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-D-cysteine","termid":"MOD:01850"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine (Cys-Ser)","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"CROSSLNK S-(2-aminovinyl)-D-cysteine (Ser-Cys)","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"},{"name":"XLNK-(D)SCys-VinAm","type":"exact"}],"termid":"MOD:00209"}


id: GO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehyde, a form of vitamin B6.","definition_xrefs":["CHEBI:17310","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal binding","termid":"GO:0070280"}


id: GO:0008675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate 6-phosphate = pyruvate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:4.1.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-phosphogluconate aldolase activity","secondary_identifiers":["MetaCyc:KDPGALDOL-RXN","RHEA:17089"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogluconic aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-P-aldolase activity","type":"related"},{"name":"2-keto-3-deoxygluconate-6-phosphate aldolase activity","type":"related"},{"name":"2-oxo-3-deoxy-6-phosphogluconate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"KDPG aldolase activity","type":"related"},{"name":"KDPG-aldolase activity","type":"related"},{"name":"ODPG aldolase activity","type":"related"},{"name":"phospho-2-dehydro-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygluconic aldolase activity","type":"related"}],"termid":"GO:0008675"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: GO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thrombin-activated receptor protein signaling pathway activity. A thrombin receptor signaling pathway is the series of molecular signals generated as a consequence of a thrombin-activated receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of thrombin-activated receptor signaling pathway","termid":"GO:0070494"},{"relation_name":"negatively_regulates","term_name":"thrombin-activated receptor signaling pathway","termid":"GO:0070493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thrombin-activated receptor signaling pathway","synonyms":[{"name":"negative regulation of thrombin receptor signaling pathway","type":"exact"},{"name":"negative regulation of thrombin receptor signalling pathway","type":"related"}],"termid":"GO:0070495"}


id: PBO:0029088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_(guanine(9)-N(1))-methyltransferase_activity","termid":"PBO:0029088"}


id: PBO:0083144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF AIM10/YER087W","termid":"PBO:0083144"}


id: GO:0044669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sodium(out)+ galactoside(out) = sodium(in) + galactoside(in).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sodium:galactoside symporter activity","termid":"GO:0044669"}


id: GO:0006767
data:
  {"annotated_genes":["SJAG_00491","SJAG_00827","SJAG_00691","SJAG_01198","SJAG_01935","SJAG_00376","SJAG_02360","SJAG_00043","SJAG_01054","SJAG_05230","SJAG_04282","SJAG_01543","SJAG_02421","SJAG_00815","SJAG_03275","SJAG_03632","SJAG_00283","SJAG_01881","SJAG_00480","SJAG_01742","SJAG_03679","SJAG_03538","SJAG_02408","SJAG_04481","SJAG_02491","SJAG_04845","SJAG_00381","SJAG_04866","SJAG_03362","SJAG_04067","SJAG_01970","SJAG_00707","SJAG_01126","SJAG_04711","SJAG_02047","SJAG_04156","SJAG_00673","SJAG_02225","SJAG_02420","SJAG_01425","SJAG_02406","SJAG_05200","SJAG_00252","SJAG_01139","SJAG_01383","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[113112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[110171,75141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[109752,102156,104426,100869,101017,86421,108490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[110129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[96709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[98848,109446,94832,85025,94836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[85167,109757],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[111756,95783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110462,96970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[83865,91600,63436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[91601,83867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[88919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[97243,106452,111790,83612,113228,103055,110843,102859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[109669,90397,103458,109663,95617,110082,112087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[109664,110083,112088,90398,95618,109670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65408,95619,58768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[95620,106525,106526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[96971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[95119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic 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vitamin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"water-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006767","terms_by_termid":{"GO:0006769":null,"GO:0006772":null,"GO:0008614":null,"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0046655":null,"GO:0046656":null,"GO:0090180":null,"GO:1990181":null}}


id: GO:0019519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentitol metabolic process","synonyms":[{"name":"pentitol metabolism","type":"exact"}],"termid":"GO:0019519"}


id: PBO:0055478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2911","termid":"PBO:0055478"}


id: GO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"negative regulation of integrin biosynthetic process","termid":"GO:0045720"},{"relation_name":"negatively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"down regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"down-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"downregulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"inhibition of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of beta 2 integrin anabolism","type":"exact"},{"name":"negative regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"negative regulation of beta 2 integrin formation","type":"exact"},{"name":"negative regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045774"}


id: PBO:0108941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 20","termid":"PBO:0108941"}


id: PBO:0044178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin beta interacting protein 1","termid":"PBO:0044178"}


id: PBO:0075807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 6, pseudogene","termid":"PBO:0075807"}


id: PBO:0054460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1857","termid":"PBO:0054460"}


id: PBO:0113220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and stabilizes these mRNAs, acting in parallel to cell wall integrity signaling to maintain expression of cell wall genes during stress; acts antagonistically to Nab6p; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0113220"}


id: PR:000050598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-ribosylation factor 6 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:34958661","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf6/GTP+","pombase_gene_id":"SPCC550.12","synonyms":[{"name":"Arf6/GTP+","type":"exact"},{"name":"PomBase_original_PRO_term_name: ADP-ribosylation factor 6, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ARF6/GTP+","type":"exact"}],"termid":"PR:000050598"}


id: GO:0010405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein, which is composed of a group of core protein of highly varying length and domain complexity. These are O-glycosylated at one or more hydroxyproline residues by arabinogalactan (AG) type II groups, which consist of (1->3)-beta-galactan and (1->6)-beta-linked galactan chains connected to each other by (1->3,1->6)-linked branch points, O-3 and O-6 positions substituted with terminal arabinosyl residues. Also, rhamnose, fucose, glucuronic and galacturonic acid can be present in the glycan structures.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall hydroxyproline-rich glycoprotein metabolic process","termid":"GO:0010404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"arabinogalactan protein metabolic process","synonyms":[{"name":"arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010405"}


id: PBO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 8","termid":"PBO:0047549"}


id: GO:0005246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"calcium channel regulator activity","termid":"GO:0005246"}


id: GO:0048300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgD isotypes","synonyms":[{"name":"down regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgD isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgD isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"negative regulation of class switching to IgD isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048300"}


id: PBO:0034380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_orthology_relationship_with","termid":"PBO:0034380"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: PBO:0090174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF, implicated in endosomal transport","termid":"PBO:0090174"}


id: GO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation","termid":"GO:0030182"}


id: PBO:0004934
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.3.27","termid":"PBO:0004934"}


id: PBO:0112513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0768 family","termid":"PBO:0112513"}


id: PBO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase","termid":"PBO:0001298"}


id: GO:0005622
data:
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