# terms

id: GO:0015363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicarboxylate (succinate/fumarate/malate) antiporter activity (obsolete GO:0015363)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"exact"}],"termid":"GO:0015363"}


id: PR:Q9UT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alpha-mannosidase 2C1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01225","PRO:DNx","PANTHER:PTHR11607:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC513.05","secondary_identifiers":["UniProtKB:Q9UT61"],"synonyms":[{"name":"Spom972h-MAN2C1","type":"exact"},{"name":"alpha-D-mannoside mannohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT61"}


id: PBO:0043955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta-gamma domain containing 3","termid":"PBO:0043955"}


id: PATO:0000462
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality denoting the lack of an entity.","definition_xrefs":["thefreedictionary.:thefreedictionary."],"direct_ancestors":[{"relation_name":"is_a","term_name":"amount","termid":"PATO:0000070"},{"relation_name":"reciprocal_of","term_name":"lacking processual parts","termid":"PATO:0001558"},{"relation_name":"reciprocal_of","term_name":"lacks all parts of type","termid":"PATO:0002000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","secondary_identifiers":["PATO:0001996"],"synonyms":[{"name":"absence","type":"exact"},{"name":"absent from organism","type":"exact"}],"termid":"PATO:0000462"}


id: GO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cell envelope, everything external to, but not including, the cytoplasmic membrane of bacteria, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell envelope organization","synonyms":[{"name":"cell envelope organisation","type":"exact"},{"name":"cell envelope organization and biogenesis","type":"related"}],"termid":"GO:0043163"}


id: PBO:0040561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2","termid":"PBO:0040561"}


id: PBO:0042200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G1","termid":"PBO:0042200"}


id: PBO:0051535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4 induced 1","termid":"PBO:0051535"}


id: PBO:0074591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5C","termid":"PBO:0074591"}


id: PR:Q9P7L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.06 gene.","definition_xrefs":["UniProtKB:Q9P7L7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C21C3.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.06","synonyms":[{"name":"Spom972h-SPBC21C3.06","type":"exact"}],"termid":"PR:Q9P7L7"}


id: PBO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_autophagy","termid":"PBO:0031814"}


id: PBO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase B","termid":"PBO:0040501"}


id: PBO:0081679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 600","termid":"PBO:0081679"}


id: PR:P20772
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trifunctional purine biosynthetic protein adenosine-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03581","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional purine biosynthetic protein ADE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.01","secondary_identifiers":["UniProtKB:P20772"],"synonyms":[{"name":"Spom972h-GART","type":"exact"}],"termid":"PR:P20772"}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: MOD:01140
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two iodine atoms.","definition_xrefs":["DeltaMass:0","OMSSA:35","PubMed:15627961","Unimod:130#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated residue","termid":"MOD:00501"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diiodinated tyrosine","synonyms":[{"name":"3,5-Diiodination (of Tyrosine)","type":"exact"},{"name":"Diiodo","type":"related"},{"name":"I2Tyr","type":"exact"},{"name":"di-Iodination","type":"related"},{"name":"diiodinationy","type":"exact"}],"termid":"MOD:01140"}


id: GO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"negative regulation of establishment of protein localization","termid":"GO:1904950"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein targeting to membrane","termid":"GO:0006612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"negative regulation of protein targeting to membrane","termid":"GO:0090315"}


id: PBO:0082124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acid phosphatase; involved in the non-vesicular transport of sterols in both directions between the endoplasmic reticulum and plasma membrane; deletion confers sensitivity to nickel","termid":"PBO:0082124"}


id: GO:0016888
data:
  {"annotated_genes":["SJAG_04183","SJAG_01648","SJAG_01173","SJAG_01832","SJAG_05237","SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84536,93232,99296,97269,100258,103843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016893"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140097","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.21.-","Reactome:R-HSA-912368"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"}],"termid":"GO:0016888","terms_by_termid":{"GO:0017108":null}}


id: PBO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 26","termid":"PBO:0060006"}


id: PBO:0013821
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexadecameric","termid":"PBO:0013821"}


id: PBO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 170","termid":"PBO:0042099"}


id: PBO:0068208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 515","termid":"PBO:0068208"}


id: PBO:0077538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 250","termid":"PBO:0077538"}


id: FYPO:0008176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at greater levels than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased centromeric inner repeat transcript level","termid":"FYPO:0008176"}


id: PBO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 4","termid":"PBO:0060917"}


id: PBO:0059834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission process 1","termid":"PBO:0059834"}


id: PBO:0059329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 3","termid":"PBO:0059329"}


id: PBO:0039412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC15 pseudogene 2","termid":"PBO:0039412"}


id: PBO:0079046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 2-1","termid":"PBO:0079046"}


id: GO:0048478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the collapse of stalled replication forks.","definition_xrefs":["GOC:vw","PMID:14560029"],"gene_count":0,"genotype_count":0,"name":"obsolete replication fork protection (obsolete GO:0048478)","synonyms":[{"name":"replication fork maintenance","type":"broad"},{"name":"replication fork stabilization","type":"broad"}],"termid":"GO:0048478"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: SO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not affect the function of the gene or cause disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign_variant","synonyms":[{"name":"benign variant","type":"exact"}],"termid":"SO:0001770"}


id: GO:0070217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a transcription factor TFIIIB complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"transcription factor TFIIIB complex assembly","synonyms":[{"name":"TFIIIB assembly","type":"exact"}],"termid":"GO:0070217"}


id: GO:0030693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a peptide bond on the carboxyl side of an aspartate residue.","definition_xrefs":["PMID:10872455"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase activity (obsolete GO:0030693)","synonyms":[{"name":"caspase activity","type":"exact"},{"name":"caspase-1 activity","type":"narrow"},{"name":"caspase-10 activity","type":"narrow"},{"name":"caspase-2 activity","type":"narrow"},{"name":"caspase-3 activity","type":"narrow"},{"name":"caspase-4 activity","type":"narrow"},{"name":"caspase-5 activity","type":"narrow"},{"name":"caspase-6 activity","type":"narrow"},{"name":"caspase-7 activity","type":"narrow"},{"name":"caspase-8 activity","type":"narrow"},{"name":"caspase-9 activity","type":"narrow"},{"name":"effector caspase activity","type":"narrow"},{"name":"signaling (initiator) caspase activity","type":"narrow"}],"termid":"GO:0030693"}


id: PBO:0004131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pal1 family protein","termid":"PBO:0004131"}


id: GO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine.","definition_xrefs":["EC:1.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6,7-dihydropteridine reductase activity","secondary_identifiers":["MetaCyc:1.5.1.34-RXN","Reactome:R-HSA-71130"],"synonyms":[{"name":"5,6,7,8-tetrahydropteridine:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5,6,7,8-tetrahydropteridine:NAD(P)H+ oxidoreductase activity","type":"related"},{"name":"6,7-dihydropteridine:NAD(P)H oxidoreductase activity","type":"related"},{"name":"DHPR activity","type":"related"},{"name":"NAD(P)H(2):6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NAD(P)H2:6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NADH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-specific dihydropteridine reductase activity","type":"related"},{"name":"dihydropteridine (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"dihydropteridine reductase (NADH) activity","type":"related"},{"name":"dihydropteridine reductase activity","type":"exact"},{"name":"dihydropteridine reduction","type":"related"}],"termid":"GO:0004155"}


id: GO:0034239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"macrophage fusion","termid":"GO:0034238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage fusion","termid":"GO:0034239"}


id: PBO:0077987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 9-1","termid":"PBO:0077987"}


id: GO:0038026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of reelin (a secreted glycoprotein) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12827279","PMID:20223215","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"reelin-mediated signaling pathway","synonyms":[{"name":"reeler-mediated signaling pathway","type":"exact"},{"name":"reelin-mediated signal transduction pathway","type":"exact"},{"name":"reelin-mediated signalling pathway","type":"exact"}],"termid":"GO:0038026"}


id: GO:0044679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which catalyzes the conversion of methanophenazine and hydrogen to form dihydromethanophenazine. This typically consists of three polypeptides.","definition_xrefs":["PMID:9555882","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methanophenazine reducing hydrogenase complex","termid":"GO:0044679"}


id: PBO:0028510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain","termid":"PBO:0028510"}


id: PBO:0111947
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-basic zinc finger","termid":"PBO:0111947"}


id: GO:0047891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + 5,7,3',4'-tetrahydroxyflavone = UDP + 7-O-beta-D-glucosyl-5,7,3',4'-tetrahydroxyflavone.","definition_xrefs":["MetaCyc:FLAVONE-7-O-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"flavone 7-O-beta-glucosyltransferase activity","secondary_identifiers":["RHEA:19577"],"synonyms":[{"name":"UDP-glucose-apigenin beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-luteolin beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:5,7,3',4'-tetrahydroxyflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-apigenin beta-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-luteolin beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:5,7,3',4'-tetrahydroxyflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"flavone 7-O-b-glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose-apigenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-luteolin glucosyltransferase activity","type":"related"}],"termid":"GO:0047891"}


id: PBO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 30","termid":"PBO:0071892"}


id: FYPO:0008235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of the nuclear RNA-directed RNA polymerase complex is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear RNA-directed RNA polymerase complex assembly","termid":"FYPO:0008235"}


id: PBO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg20","termid":"PBO:0090577"}


id: GO:0180029
data:
  {"annotated_genes":["SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111855],"is_not":false,"summary":null,"term":"GO:0180029"}]},"cv_name":"biological_process","definition":"The directed movement of phosphate ions (Pi) from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphate ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180029","terms_by_termid":{"GO:0180029":null}}


id: GO:0062067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast photosystem I.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chloroplast photosystem I binding","termid":"GO:0062067"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["PO:0008062","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: PBO:0076288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin I","termid":"PBO:0076288"}


id: GO:0030791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + arsenite = S-adenosyl-L-homocysteine + methylarsonate.","definition_xrefs":["EC:2.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arsenite methyltransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0805","Reactome:R-HSA-5696220","MetaCyc:2.1.1.137-RXN","MetaCyc:2.1.1.138-RXN","Reactome:R-HSA-5696213"],"synonyms":[{"name":"S-adenosyl-L-methionine:arsenic(III) methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:arsenite As-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:methylarsonite As-methyltransferase activity","type":"related"}],"termid":"GO:0030791"}


id: PBO:0058335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4709","termid":"PBO:0058335"}


id: GO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-mannose + H+ + NADH.","definition_xrefs":["RHEA:15029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"mannitol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.255-RXN","EC:1.1.1.255","KEGG_REACTION:R07135"],"synonyms":[{"name":"MTD activity","type":"related"},{"name":"NAD-dependent mannitol dehydrogenase activity","type":"broad"},{"name":"mannitol:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0046029"}


id: GO:0046950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone, as carried out by individual cells. Although 3-hydroxybutyrate is not a ketone, it is classed as a ketone body because it exists in an equilibrium with acetoacetate. Ketone bodies may accumulate in excessive amounts in the body in starvation, diabetes mellitus or in other defects of carbohydrate metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cellular ketone body metabolic process","synonyms":[{"name":"cellular ketone body metabolism","type":"exact"}],"termid":"GO:0046950"}


id: FYPO:0007026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional modification of a guanosine residue in a tRNA molecule to form wybutosine occurs to a lower extent than normal.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased tRNA wybutosine biosynthesis","synonyms":[{"name":"decreased tRNA wybutosine biosynthesis during mitotic cell cycle","type":"related"},{"name":"decreased tRNA wybutosine biosynthesis during vegetative growth","type":"exact"},{"name":"decreased tRNA wybutosine biosynthetic process","type":"exact"},{"name":"decreased tRNA wybutosine formation","type":"exact"},{"name":"decreased tRNA yW formation","type":"exact"},{"name":"decreased wybutosine level in tRNA","type":"related"},{"name":"reduced tRNA wybutosine biosynthesis","type":"exact"}],"termid":"FYPO:0007026"}


id: PBO:0057204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374c","termid":"PBO:0057204"}


id: PR:P35679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.03c","secondary_identifiers":["UniProtKB:P35679"],"synonyms":[{"name":"L2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP8B7.03c","type":"related"},{"name":"Spom972h-RPL4","type":"exact"},{"name":"rpl2","type":"related"},{"name":"rpl4","type":"related"}],"termid":"PR:P35679"}


id: SO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the mutated gene product does not allow for one or more basic functions necessary for survival.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal_variant","synonyms":[{"name":"lethal variant","type":"exact"}],"termid":"SO:0001773"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0083111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase; involved in base excision repair, localizes to the nucleus; sumoylated; NTG2 has a paralog, NTG1, that arose from the whole genome duplication","termid":"PBO:0083111"}


id: PBO:0079456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 1, U6 snRNA-specific","termid":"PBO:0079456"}


id: SO:0000644
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"antisense_primary_transcript","termid":"SO:0000645"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Antisense_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:antisense_RNA","type":"exact"},{"name":"antisense RNA","type":"exact"}],"termid":"SO:0000644"}


id: GO:0002949
data:
  {"annotated_genes":["SJAG_06560","SJAG_04700","SJAG_04182","SJAG_04201","SJAG_00865","SJAG_00378","SJAG_02863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94385,95552,97235,100240,112389],"is_not":false,"summary":null,"term":"GO:0002949"},{"annotations":[114657,110312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"}]},"cv_name":"biological_process","definition":"The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in tRNAs that decode ANN codons (where N is any base).","definition_xrefs":["PMID:19287007","GOC:imk","PMID:21183954","PMID:23258706","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"tRNA threonylcarbamoyladenosine metabolic process","termid":"GO:0070525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00378":null,"SJAG_00865":null,"SJAG_02863":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine modification","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070526"],"synonyms":[{"name":"t6A biosynthesis","type":"exact"},{"name":"t6A biosynthetic process","type":"exact"},{"name":"t6A tRNA modification","type":"exact"},{"name":"threonylcarbamoyladenosine anabolism","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthesis","type":"exact"},{"name":"threonylcarbamoyladenosine biosynthetic process","type":"exact"},{"name":"threonylcarbamoyladenosine formation","type":"exact"},{"name":"threonylcarbamoyladenosine synthesis","type":"exact"}],"termid":"GO:0002949","terms_by_termid":{"GO:0002949":null,"GO:0072670":null}}


id: GO:0016189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a synaptic vesicle with an endosome.","definition_xrefs":["GOC:curators","PMID:10099709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome organization","termid":"GO:0007032"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"part_of","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle to endosome fusion","termid":"GO:0016189"}


id: PBO:0057387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548bb","termid":"PBO:0057387"}


id: GO:0140833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphotyrosine (position 1).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 kinase activity","type":"exact"}],"termid":"GO:0140833"}


id: PBO:0047583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 3","termid":"PBO:0047583"}


id: PR:Q8TFH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.09 gene.","definition_xrefs":["UniProtKB:Q8TFH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein PB17E12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.09","synonyms":[{"name":"Spom972h-SPAPB17E12.09","type":"exact"}],"termid":"PR:Q8TFH5"}


id: PBO:0074680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63B","termid":"PBO:0074680"}


id: PATO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000704 pain threshold value (obsolete PATO:0000704)","termid":"PATO:0000704"}


id: PBO:0070917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 25","termid":"PBO:0070917"}


id: PR:Q9HGL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C800.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.11","synonyms":[{"name":"Spom972h-SPBC800.11","type":"exact"}],"termid":"PR:Q9HGL1"}


id: PBO:0089853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc2","termid":"PBO:0089853"}


id: GO:0019717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptosome (obsolete GO:0019717)","secondary_identifiers":["Wikipedia:Synaptosome"],"synonyms":[{"name":"synaptosome","type":"exact"}],"termid":"GO:0019717"}


id: FYECO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-deoxyglucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-DG","synonyms":[{"name":"2-deoxy-D-glucose added","type":"exact"},{"name":"2-deoxyglucose added","type":"exact"}],"termid":"FYECO:0000332"}


id: PBO:0068087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 393","termid":"PBO:0068087"}


id: GO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of renin into the blood stream by juxtoglomerular cells.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","termid":"GO:0001999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"renin secretion into blood stream","synonyms":[{"name":"renin release into blood stream","type":"exact"}],"termid":"GO:0002001"}


id: MOD:00517
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"},{"name":"NeuAc-Hex-HexNAc","type":"exact"}],"termid":"MOD:00517"}


id: GO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of thyroid-stimulating hormone, a peptide hormone that stimulates the activity of the thyroid gland, from secretory granules in the anterior pituitary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thyroid-stimulating hormone secretion","synonyms":[{"name":"TSH secretion","type":"exact"},{"name":"thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:0070460"}


id: GO:0140056
data:
  {"annotated_genes":["SJAG_02626","SJAG_03848","SJAG_01633","SJAG_00380","SJAG_03552","SJAG_02320","SJAG_01305","SJAG_03247","SJAG_01772","SJAG_00029","SJAG_01564","SJAG_03347","SJAG_01168","SJAG_00280","SJAG_01598","SJAG_01437","SJAG_01929","SJAG_04370","SJAG_05184","SJAG_04978","SJAG_04417","SJAG_01697","SJAG_04966","SJAG_03710","SJAG_02699","SJAG_02587","SJAG_00053","SJAG_03416","SJAG_03170","SJAG_01324","SJAG_00171","SJAG_04221","SJAG_03499","SJAG_03005","SJAG_01116","SJAG_04023","SJAG_03536","SJAG_04413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016240"},{"annotations":[93558,100466,97883,107738,114717,86527,87587,114982,114196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[91659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048211"},{"annotations":[103734,103606,101921,112686,103104,87018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990456"},{"annotations":[105504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071562"},{"annotations":[103106,111270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"},{"annotations":[90427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140057"},{"annotations":[96311,105887,104762,97222,108760,96411,114578,113601,95609,105736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048278"},{"annotations":[114476,113562,114252,96352,114873,88430,86693,85848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The process by which an organelle membrane interacts with another membrane via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane docking","termid":"GO:0022406"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00171":null,"SJAG_00280":null,"SJAG_00380":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01305":null,"SJAG_01324":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_01598":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_01929":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_02626":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03347":null,"SJAG_03416":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03710":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04221":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04966":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"organelle localization by membrane tethering","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140056","terms_by_termid":{"GO:0006904":null,"GO:0016240":null,"GO:0048211":null,"GO:0048278":null,"GO:0061817":null,"GO:0071562":null,"GO:0140057":null,"GO:1990456":null,"GO:1990854":null}}


id: GO:1901816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-zeacarotene.","definition_xrefs":["PMID:3710717","GOC:TermGenie","GOC:yaf","UniPathway:UPA00805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene metabolic process","synonyms":[{"name":"beta-zeacarotene metabolism","type":"exact"}],"termid":"GO:1901816"}


id: GO:0060348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone development","termid":"GO:0060348"}


id: PBO:0039894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor gamma","termid":"PBO:0039894"}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_00053","SJAG_04221","SJAG_03247","SJAG_04413","SJAG_03170","SJAG_01116","SJAG_02626","SJAG_04417","SJAG_01564","SJAG_01168","SJAG_01437"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87587,86527,114982,93558,114196,107738,100466,114717,97883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[86528,100468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[103106,111270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: PBO:0028727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization_at_cell_tip","termid":"PBO:0028727"}


id: PBO:0056984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-2","termid":"PBO:0056984"}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: PBO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maintenance_of_spindle_pole_body_localization","termid":"PBO:0033774"}


id: GO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP-L-fucose metabolic process","synonyms":[{"name":"GDP-L-fucose metabolism","type":"exact"}],"termid":"GO:0046368"}


id: PBO:0049989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2","termid":"PBO:0049989"}


id: PBO:0029512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_vegetative_cell_population_(obsolete_FYPO:0002202)","termid":"PBO:0029512"}


id: GO:0007192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:signaling","GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, adenylate cyclase activating pathway","type":"related"},{"name":"serotonin receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0007192"}


id: GO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which oidia, a type of asexual spore found in fungi, are formed. Oidia are borne a few at a time on very simple hyphae that protrude a short distance into the substrate, and are usually presumed not to constitute the main reproductive strategy of the fungus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oidium formation","termid":"GO:0034297"}


id: SO:1001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is alternatively spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"alternatively_spliced","termid":"SO:0000877"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternatively_spliced_transcript","synonyms":[{"name":"alternatively spliced transcript","type":"exact"}],"termid":"SO:1001187"}


id: PBO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub2","termid":"PBO:0016534"}


id: GO:0141064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the onset of de novo transcription from the zygotic genome as part of the maternal-to-zygote transition in gene expression. The zygote overcomes the silencing that has been established. The cause of this silencing could be due to several factors: chromatin modifications leading to repression, or lack of adequate transcription machinery.","definition_xrefs":["PMID:19204068","PMID:20808952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"part_of","term_name":"maternal-to-zygotic transition of gene expression","termid":"GO:0160021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"zygotic genome activation","synonyms":[{"name":"ZGA","type":"broad"}],"termid":"GO:0141064"}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: GO:0003083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin directly decreases the rate of natriuresis and diuresis in the kidney.","definition_xrefs":["GOC:dph","GOC:mtg_cardio","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal output by angiotensin","termid":"GO:0002019"},{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal output by angiotensin","synonyms":[{"name":"angiotensin mediated negative regulation of renal output","type":"exact"},{"name":"angiotensin-mediated negative regulation of renal output","type":"exact"}],"termid":"GO:0003083"}


id: PBO:0091837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog Cbp1, domesticated transposable element","termid":"PBO:0091837"}


id: PBO:0073155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit alpha 1","termid":"PBO:0073155"}


id: PBO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase Slc1 (predicted)","termid":"PBO:0002552"}


id: GO:0071037
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88348,109342],"is_not":false,"summary":null,"term":"GO:0071037"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nuclear RNA (snRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snRNA.","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA catabolic process","termid":"GO:0016076"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent snRNA catabolic process","type":"related"}],"termid":"GO:0071037","terms_by_termid":{"GO:0071037":null}}


id: FYECO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ketoconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ketoconazole","termid":"FYECO:0000350"}


id: PBO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD+ transporter (predicted)","termid":"PBO:0000408"}


id: GO:0005198
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id: GO:0042565
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id: MOD:00034
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id: GO:0055111
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id: PBO:0091186
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id: PBO:0058138
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id: GO:1902944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any aspartic-type endopeptidase activity that is involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:10206644","GO_REF:0000061","GOC:sjp","PMID:24577224","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"}],"termid":"GO:1902944"}


id: PBO:0058267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4645","termid":"PBO:0058267"}


id: PBO:0027380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nuclear_pore_aggregation_in_cytoplasm","termid":"PBO:0027380"}


id: PBO:0059304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50","termid":"PBO:0059304"}


id: FYPO:0007399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"normal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007399"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_02809","SJAG_03760","SJAG_03121","SJAG_04785","SJAG_04398","SJAG_04819","SJAG_03261","SJAG_04928","SJAG_02565","SJAG_01136","SJAG_00737","SJAG_01868","SJAG_03648","SJAG_05286","SJAG_00984","SJAG_02432","SJAG_03910","SJAG_00975","SJAG_03258","SJAG_01285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89124],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[84349,87922,100481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[99918,114485,83620,105273,89371,93743,97390,100916,109486,87711,104159,99924,99171,89280,90268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[85266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[97391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: GO:0097050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin.","definition_xrefs":["CL:0000169","PMID:16087305","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type B pancreatic cell apoptotic process","synonyms":[{"name":"pancreatic B cell apoptosis","type":"exact"},{"name":"pancreatic beta cell apoptosis","type":"exact"},{"name":"type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:0097050"}


id: PBO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca2 (predicted)","termid":"PBO:0018173"}


id: PBO:0060124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 25","termid":"PBO:0060124"}


id: GO:0052656
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106514],"is_not":false,"summary":null,"term":"GO:0052656"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoic acid + L-glutamic acid.","definition_xrefs":["EC:2.6.1.42","MetaCyc:BRANCHED-CHAINAMINOTRANSFERILEU-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-isoleucine transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02199","RHEA:24801"],"synonyms":[{"name":"L-isoleucine aminotransferase activity","type":"exact"}],"termid":"GO:0052656","terms_by_termid":{"GO:0052656":null}}


id: PBO:0074260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO4A1 antisense RNA 1","termid":"PBO:0074260"}


id: PBO:0082286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3p polarization-specific docking factor; required for the polarized distribution of the ADP-ribosylation factor, Arf3p; participates in polarity development and maintenance of a normal haploid budding pattern; interacts with Cnm7p","termid":"PBO:0082286"}


id: PBO:0040061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 5 like","termid":"PBO:0040061"}


id: PBO:0078470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-8","termid":"PBO:0078470"}


id: FYPO:0001517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aluminium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aluminium","synonyms":[{"name":"resistance to aluminium cation","type":"exact"},{"name":"resistance to aluminium during mitotic cell cycle","type":"related"},{"name":"resistance to aluminium during vegetative growth","type":"exact"},{"name":"resistance to aluminium ions","type":"exact"},{"name":"resistance to aluminum","type":"exact"},{"name":"resistant to aluminium","type":"exact"}],"termid":"FYPO:0001517"}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: PBO:0064297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 5","termid":"PBO:0064297"}


id: PBO:0005227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC subunit Smc6","termid":"PBO:0005227"}


id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: PBO:0083115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair methyltransferase (6-O-methylguanine-DNA methylase); involved in protection against DNA alkylation damage","termid":"PBO:0083115"}


id: PBO:0069745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1026, pseudogene","termid":"PBO:0069745"}


id: GO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the hormone vasopressin into the blood stream by the hypothalamus and pituitary gland contributing to fast regulation of blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin secretion","termid":"GO:0030103"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by vasopressin","termid":"GO:0001992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion of vasopressin involved in fast regulation of systemic arterial blood pressure","synonyms":[{"name":"secretion of vasopressin during fast control of blood pressure","type":"related"},{"name":"secretion of vasopressin during fast regulation of systemic arterial blood pressure","type":"related"}],"termid":"GO:0002004"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: GO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf pavement cell development","termid":"GO:0090436"}


id: FYPO:0004733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains fewer cytoplasmic microtubules nucleated from the equatorial microtubule organizing center than normal.","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in decreased numbers","termid":"FYPO:0003430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in decreased numbers during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from eMTOC present in reduced numbers","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center present in decreased numbers","type":"exact"},{"name":"decreased number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"},{"name":"reduced number of cytoplasmic microtubules nucleated from eMTOC","type":"exact"}],"termid":"FYPO:0004733"}


id: PBO:0067005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 11, pseudogene","termid":"PBO:0067005"}


id: GO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a T cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["GOC:add","PMID:11417857","PMID:15120183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell antigen processing and presentation","synonyms":[{"name":"T lymphocyte antigen processing and presentation","type":"exact"},{"name":"T-cell antigen processing and presentation","type":"exact"},{"name":"T-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002457"}


id: PBO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin and PNKP like factor","termid":"PBO:0039703"}


id: GO:1901949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process","termid":"GO:1901947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthetic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate anabolism","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate biosynthesis","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate formation","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate synthesis","type":"exact"}],"termid":"GO:1901949"}


id: PBO:0029187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_actin_filament_binding","termid":"PBO:0029187"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: GO:0032299
data:
  {"annotated_genes":["SJAG_02039","SJAG_01884","SJAG_00400"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84445,94221,99041],"is_not":false,"summary":null,"term":"GO:0032299"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p.","definition_xrefs":["PMID:14734815","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ribonuclease H2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNase H2 complex","type":"exact"}],"termid":"GO:0032299","terms_by_termid":{"GO:0032299":null}}


id: GO:0160115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules.","definition_xrefs":["GOC:krc","PMID:29430673","PMID:1262413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet ribbon","termid":"GO:0160115"}


id: PBO:0005334
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia","termid":"PBO:0005334"}


id: PBO:0005483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc7","termid":"PBO:0005483"}


id: MOD:01451
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that converts an L-serine residue to O-phosphopantetheine-L-serine with secondary neutral loss of pantetheine resulting in O-phospho-L-serine.","definition_xrefs":["PubMed:17042494","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O-phosphopantetheine-L-serine","termid":"MOD:00159"},{"relation_name":"is_a","term_name":"O-phospho-L-serine","termid":"MOD:00046"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine arising from O-phosphopantetheine-L-serine after neutral loss of pantetheine","termid":"MOD:01451"}


id: GO:0035692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds macrophage migration inhibitory factor. Comprises CD74 and CD44 cell surface proteins.","definition_xrefs":["GOC:BHF","PMID:12782713","PMID:17045821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"macrophage migration inhibitory factor receptor complex","termid":"GO:0035692"}


id: PBO:0050960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 3","termid":"PBO:0050960"}


id: GO:0051892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardioblast differentiation, the process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"cardioblast differentiation","termid":"GO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast differentiation","synonyms":[{"name":"down regulation of cardioblast differentiation","type":"exact"},{"name":"down-regulation of cardioblast differentiation","type":"exact"},{"name":"downregulation of cardioblast differentiation","type":"exact"},{"name":"inhibition of cardioblast differentiation","type":"narrow"}],"termid":"GO:0051892"}


id: PBO:0039496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A19, pseudogene","termid":"PBO:0039496"}


id: PBO:0043115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 2A","termid":"PBO:0043115"}


id: GO:0102818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lycopene + 2 O2 = 2 sulcatone + bixin aldehyde.","definition_xrefs":["GOC:pz","EC:1.13.12.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"lycopene cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-8236"],"termid":"GO:0102818"}


id: PBO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine biosynthesis protein","termid":"PBO:0002968"}


id: GO:1905571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-10 (IL-10) and that consists of, at a minimum, a dimeric interleukin, an alpha and a beta chain as well as optional additional kinase subunits. The alpha chain binds IL-10 with high affinity and subsequently binds the common beta receptor chain that forms part of multiple interleukin receptors.","definition_xrefs":["PMID:16982608","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-10 receptor complex","synonyms":[{"name":"IL-10 receptor complex","type":"exact"},{"name":"IL-10-receptor complex","type":"exact"},{"name":"IL10 receptor complex","type":"exact"},{"name":"interleukin-10-receptor complex","type":"exact"}],"termid":"GO:1905571"}


id: PBO:0031463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_lead","termid":"PBO:0031463"}


id: GO:0120214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of histidine biosynthetic process","synonyms":[{"name":"down regulation of histidine anabolism","type":"exact"},{"name":"down regulation of histidine biosynthesis","type":"exact"},{"name":"down regulation of histidine biosynthetic process","type":"exact"},{"name":"down regulation of histidine formation","type":"exact"},{"name":"down regulation of histidine synthesis","type":"exact"},{"name":"down-regulation of histidine anabolism","type":"exact"},{"name":"down-regulation of histidine biosynthesis","type":"exact"},{"name":"down-regulation of histidine biosynthetic process","type":"exact"},{"name":"down-regulation of histidine formation","type":"exact"},{"name":"down-regulation of histidine synthesis","type":"exact"},{"name":"downregulation of histidine anabolism","type":"exact"},{"name":"downregulation of histidine biosynthesis","type":"exact"},{"name":"downregulation of histidine biosynthetic process","type":"exact"},{"name":"downregulation of histidine formation","type":"exact"},{"name":"downregulation of histidine synthesis","type":"exact"},{"name":"inhibition of histidine anabolism","type":"narrow"},{"name":"inhibition of histidine biosynthesis","type":"narrow"},{"name":"inhibition of histidine biosynthetic process","type":"narrow"},{"name":"inhibition of histidine formation","type":"narrow"},{"name":"inhibition of histidine synthesis","type":"narrow"},{"name":"negative regulation of histidine anabolism","type":"exact"},{"name":"negative regulation of histidine biosynthesis","type":"exact"},{"name":"negative regulation of histidine formation","type":"exact"},{"name":"negative regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120214"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: GO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).","definition_xrefs":["GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain morphogenesis","termid":"GO:0048854"}


id: PBO:0055484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2917","termid":"PBO:0055484"}


id: PBO:0077806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4","termid":"PBO:0077806"}


id: PATO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000920 relative volume (obsolete PATO:0000920)","termid":"PATO:0000920"}


id: GO:0004448
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD(P)+ = 2-oxoglutarate + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IDH activity","type":"related"},{"name":"IDP activity","type":"related"},{"name":"isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitric acid dehydrogenase activity","type":"exact"},{"name":"isocitric dehydrogenase activity","type":"exact"},{"name":"oxalosuccinate carboxylase activity","type":"exact"},{"name":"oxalosuccinate decarboxylase activity","type":"exact"},{"name":"oxalosuccinic decarboxylase activity","type":"exact"}],"termid":"GO:0004448","terms_by_termid":{"GO:0004450":null}}


id: PBO:0063895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class S","termid":"PBO:0063895"}


id: PBO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4","termid":"PBO:0042962"}


id: PBO:0062660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 1","termid":"PBO:0062660"}


id: PBO:0060979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve growth factor","termid":"PBO:0060979"}


id: GO:0097257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + NADP+ = 12-oxo-leukotriene B4 + NADPH + H+.","definition_xrefs":["KEGG_REACTION:R03864","PMID:9461497","GOC:mw","PMID:8394361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 12-hydroxy dehydrogenase activity","secondary_identifiers":["RHEA:50608","Reactome:R-HSA-2161567"],"synonyms":[{"name":"leukotriene B4 12-hydroxydehydrogenase activity","type":"exact"}],"termid":"GO:0097257"}


id: GO:2001192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation involved in immune response","termid":"GO:2001191"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"negative regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001192"}


id: PBO:0086465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; predicted to be involved in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; not an essential gene; YMR310C has a paralog, YGR283C, that arose from the whole genome duplication","termid":"PBO:0086465"}


id: GO:1902929
data:
  {"annotated_genes":["SJAG_01388"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95742],"is_not":false,"summary":null,"term":"GO:1902929"}]},"cv_name":"cellular_component","definition":"Any plasma membrane part that is part of a growing cell tip.","definition_xrefs":["PMID:17085965","GOC:TermGenie","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane of cell tip","termid":"GO:0031520"},{"relation_name":"part_of","term_name":"growing cell tip","termid":"GO:0035838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane of growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"growing cell tip plasma membrane part","type":"exact"},{"name":"plasma membrane part of growing cell end","type":"exact"},{"name":"plasma membrane part of growing cell tip","type":"exact"}],"termid":"GO:1902929","terms_by_termid":{"GO:1902929":null}}


id: PBO:0081619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 548","termid":"PBO:0081619"}


id: GO:0034010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfolactate = pyruvate + sulfite.","definition_xrefs":["EC:4.4.1.24","RHEA:21428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfolactate sulfo-lyase activity","secondary_identifiers":["KEGG_REACTION:R07633","MetaCyc:RXN-11691"],"synonyms":[{"name":"3-sulfolactate bisulfite-lyase (pyruvate-forming) activity","type":"related"},{"name":"3-sulfolactate bisulfite-lyase activity","type":"related"},{"name":"Suy","type":"related"},{"name":"SuyAB","type":"related"}],"termid":"GO:0034010"}


id: GO:0075148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of signal transduction in response to host (obsolete GO:0075148)","synonyms":[{"name":"positive regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075148"}


id: GO:0061595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 6-deoxy-6-sulfofructose-1-phosphate = 3-sulfolactaldehyde + dihydroxyacetone phosphate.","definition_xrefs":["PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"6-deoxy-6-sulfofructose-1-phosphate aldolase activity","termid":"GO:0061595"}


id: PR:Q09695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.02c","synonyms":[{"name":"Spom972h-psr1","type":"exact"}],"termid":"PR:Q09695"}


id: PBO:0067896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 198","termid":"PBO:0067896"}


id: PBO:0076050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 4","termid":"PBO:0076050"}


id: PBO:0082518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; complex acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0082518"}


id: PBO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit","termid":"PBO:0001082"}


id: PBO:0028836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028836"}


id: GO:0070374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"positively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"activation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"positive regulation of ERK cascade","type":"broad"},{"name":"positive regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"positive regulation of ERK1 cascade","type":"narrow"},{"name":"positive regulation of ERK1/2 cascade","type":"exact"},{"name":"positive regulation of ERK2 cascade","type":"narrow"},{"name":"positive regulation of MAPK1 cascade","type":"narrow"},{"name":"positive regulation of MAPK3 cascade","type":"narrow"},{"name":"stimulation of ERK1 and ERK2 cascade","type":"narrow"},{"name":"up regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"up-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"upregulation of ERK1 and ERK2 cascade","type":"exact"}],"termid":"GO:0070374"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: GO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a Langerhans cell.","definition_xrefs":["GOC:dph","PMID:22729249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell differentiation","termid":"GO:0061520"}


id: PBO:0017981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2 (predicted)","termid":"PBO:0017981"}


id: GO:0055070
data:
  {"annotated_genes":["SJAG_02399","SJAG_01694","SJAG_00802","SJAG_00668","SJAG_04403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92383],"is_not":false,"summary":null,"term":"GO:0055070"},{"annotations":[92384,89228,73815,103935,96252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0055070","terms_by_termid":{"GO:0006878":null,"GO:0055070":null}}


id: GO:0016810
data:
  {"annotated_genes":["SJAG_03775","SJAG_01416","SJAG_00476","SJAG_04380","SJAG_00444","SJAG_04300","SJAG_03398","SJAG_04467","SJAG_04123","SJAG_03227","SJAG_02420","SJAG_00811","SJAG_01673","SJAG_02721","SJAG_01987","SJAG_00964","SJAG_02400","SJAG_00035","SJAG_03013","SJAG_03771","SJAG_00352","SJAG_00450","SJAG_04189","SJAG_02618","SJAG_04711","SJAG_03627","SJAG_04681","SJAG_00412","SJAG_00376","SJAG_00106","SJAG_04039","SJAG_00107","SJAG_02276","SJAG_05287","SJAG_04156","SJAG_01231","SJAG_00581","SJAG_01997","SJAG_00392","SJAG_03844","SJAG_04186","SJAG_04939","SJAG_02766","SJAG_01075","SJAG_00691","SJAG_03275","SJAG_01054","SJAG_01995"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[110757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[88559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004037"},{"annotations":[97909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[93457,109284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004053"},{"annotations":[87872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[85323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[104459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[83761,104398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019239"},{"annotations":[113230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[85579,89524,102596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[88920,106489,113359,89525,107158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[97244,83613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[111096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[108188,93327,105547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004407"},{"annotations":[100291,108189,105548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[105549,100293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[100294,105551,93328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[107525,84669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016811"},{"annotations":[112443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"},{"annotations":[115017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[58972,96439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043864"},{"annotations":[108495,104430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[97700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[86179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100296,110493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[105699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[91059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[100817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[103945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"},{"annotations":[103038,66660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[103039,77374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[56885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050334"},{"annotations":[100335,97211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[100049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"},{"annotations":[87555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[87877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id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: GO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall modification involved in fruit ripening","synonyms":[{"name":"cell wall modification during ripening","type":"related"}],"termid":"GO:0009829"}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: PBO:0071409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 15","termid":"PBO:0071409"}


id: GO:1903553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular vesicular exosome assembly.","definition_xrefs":["PMID:24105262","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"is_a","term_name":"regulation of extracellular exosome assembly","termid":"GO:1903551"},{"relation_name":"positively_regulates","term_name":"extracellular exosome assembly","termid":"GO:0071971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of extracellular exosome assembly","synonyms":[{"name":"activation of extracellular vesicular exosome assembly","type":"narrow"},{"name":"positive regulation of extracellular vesicular exosome assembly","type":"related"},{"name":"up regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"up-regulation of extracellular vesicular exosome assembly","type":"exact"},{"name":"upregulation of extracellular vesicular exosome assembly","type":"exact"}],"termid":"GO:1903553"}


id: FYPO:0000283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A chromosome segregation phenotype in which chromosomes are broken during mitotic chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000661","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"mitotic chromosome fragmentation upon segregation","synonyms":[{"name":"chromosome fragmentation upon mitotic chromosome segregation","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitosis","type":"exact"},{"name":"chromosome fragmentation upon segregation during mitotic cell cycle","type":"exact"},{"name":"chromosome fragmentation upon segregation during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, chromosome fragmentation","type":"exact"},{"name":"fragmented mitotic chromosomes upon segregation","type":"exact"}],"termid":"FYPO:0000283"}


id: MOD:01523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01523"}


id: GO:0070965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"activation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"upregulation of neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070965"}


id: GO:0120174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A stress-inducible protein catabolic pathway that promotes protein quality control by accelerating the degradation of misfolded ER membrane and cytosolic proteins, as well as native proteins. The pathway starts with the activation, by stress, of the Nma111p/Ynm3p serine protease, which cleaves the stress-induced hydrophilin Roq1p, resulting in the generation of a Roq1p cleavage product that selectively interacts with Ubr1p, an E3 ubiquitin ligase. Interaction with the Ubr1p type-1 substrate binding site reprograms the substrate specificity of this ubiquitin ligase resulting in the selective proteasome-mediated degradation of misfolded and native proteins. The pathway ends with degradation of the protein by the cytoplasmic proteasome. Currently, NMA111, ROQ1, UBR1, RAD6, and CDC48 are considered to be involved in this quality control pathway.","definition_xrefs":["GOC:rl","GOC:rn","PMID:29861160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"stress-induced homeostatically regulated protein degradation pathway","synonyms":[{"name":"SHRED pathway","type":"related"}],"termid":"GO:0120174"}


id: GO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050705","GO:0050721"],"synonyms":[{"name":"regulation of IL-1 alpha production","type":"exact"},{"name":"regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032650"}


id: GO:0047322
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] + ATP = [3-hydroxy-3-methylglutaryl-CoA reductase (NADPH)] phosphate + ADP.","definition_xrefs":["EC:2.7.11.31","MetaCyc:2.7.1.109-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity","secondary_identifiers":["MetaCyc:2.7.11.27-RXN","EC:2.7.11.27"],"synonyms":[{"name":"3-hydroxy-3-methylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"AMPK","type":"related"},{"name":"ATP:hydroxymethylglutaryl-CoA reductase (NADPH) phosphotransferase activity","type":"related"},{"name":"HMG-CoA reductase kinase activity","type":"related"},{"name":"STK29","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH2) kinase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"}],"termid":"GO:0047322"}


id: PATO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligopotent","termid":"PATO:0001401"}


id: GO:0003333
data:
  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process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"transmembrane 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acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid membrane transport","type":"exact"}],"termid":"GO:0003333","terms_by_termid":{"GO:0003333":null,"GO:0015813":null,"GO:0032974":null,"GO:0032975":null,"GO:0034488":null,"GO:0034490":null,"GO:0070778":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:0140300":null,"GO:1901482":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null,"GO:1990822":null}}


id: PBO:0055353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2782","termid":"PBO:0055353"}


id: GO:0030694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The central portion of the bacterial-type flagellar basal body, which spans the periplasm and threads through the rings.","definition_xrefs":["GOC:cilia","PMID:11133968","PMID:10572114","GOC:mtg_sensu","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, rod","synonyms":[{"name":"flagellar basal body, rod","type":"exact"},{"name":"flagellin-based flagellum basal body, rod","type":"exact"}],"termid":"GO:0030694"}


id: PBO:0004999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK regulator, involved in ribosome export (predicted)","termid":"PBO:0004999"}


id: PBO:0066349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras converting CAAX endopeptidase 1","termid":"PBO:0066349"}


id: GO:0005223
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly cGMP-activated cation channel activity","synonyms":[{"name":"intracellular cGMP activated cation channel activity","type":"exact"},{"name":"intracellular cGMP-activated cation channel activity","type":"exact"}],"termid":"GO:0005223"}


id: GO:0008298
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  {"annotated_genes":["SJAG_03696"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113341],"is_not":false,"summary":null,"term":"GO:0008298"}]},"cv_name":"biological_process","definition":"Any process in which mRNA is transported to, or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular mRNA localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"intracellular mRNA localisation","type":"exact"},{"name":"intracellular mRNA positioning","type":"narrow"},{"name":"mRNA localization, intracellular","type":"exact"},{"name":"mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:0008298","terms_by_termid":{"GO:0008298":null}}


id: MOD:00490
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:00490"}


id: PBO:0079223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 3","termid":"PBO:0079223"}


id: PBO:0065031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 6","termid":"PBO:0065031"}


id: GO:0031866
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: GO:0015151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of alpha-glucosides from one side of a membrane to the other. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["GOC:jl","ISBN:0198506732","PMID:28510148","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"}


id: GO:0006915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["GOC:go_curators","ISBN:0198506732","PMID:21494263","GOC:ecd","GOC:cjm","GOC:dhl","GOC:tb","PMID:18846107","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process","secondary_identifiers":["Wikipedia:Apoptosis","GO:0008632","GO:0006917"],"synonyms":[{"name":"activation of apoptosis","type":"narrow"},{"name":"apoptosis","type":"narrow"},{"name":"apoptosis activator activity","type":"related"},{"name":"apoptosis signaling","type":"narrow"},{"name":"apoptotic cell death","type":"exact"},{"name":"apoptotic program","type":"narrow"},{"name":"apoptotic programmed cell death","type":"exact"},{"name":"caspase-dependent programmed cell death","type":"related"},{"name":"cell suicide","type":"broad"},{"name":"cellular suicide","type":"broad"},{"name":"commitment to apoptosis","type":"related"},{"name":"induction of apoptosis","type":"related"},{"name":"induction of apoptosis by p53","type":"related"},{"name":"programmed cell death by apoptosis","type":"exact"},{"name":"signaling (initiator) caspase activity","type":"related"},{"name":"type I programmed cell death","type":"narrow"}],"termid":"GO:0006915"}


id: GO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chronic inflammatory response to a non-antigenic stimulus such as heat or physical trauma.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}


id: PBO:0082943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis; with Sdo1p, a guanine nucleotide exchange factor (GEF), promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; required for quality control check of newly made large ribosomal subunits before they are released into the pool of translating ribosomes","termid":"PBO:0082943"}


id: internal:narrow
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narrow","termid":"internal:narrow"}


id: MOD:00506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, Hex(5) HexNAc(2)","definition_xrefs":["RESID:AA0151#var","PubMed:5490222","Unimod:137#N","PubMed:1694179","PubMed:111247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-linked glycan core N4-glycosylated asparagine","synonyms":[{"name":"Hex(5)HexNAc(2)","type":"related"},{"name":"N-linked glycan core","type":"related"}],"termid":"MOD:00506"}


id: PBO:0087540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex associates with the V1 domain of the vacuolar membrane (H+)-ATPase (V-ATPase) and promotes assembly and reassembly of the holoenzyme","termid":"PBO:0087540"}


id: PBO:0056102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 6B","termid":"PBO:0056102"}


id: PBO:0042915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor properdin","termid":"PBO:0042915"}


id: PBO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifted","termid":"PBO:0007714"}


id: PBO:0082924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c oxidase subunit; required for assembly of the Complex III-Complex IV supercomplex, and for assembly of Cox13p and Rcf2p into cytochrome c oxidase; similar to Rcf2p, and either Rcf1p or Rcf2p is required for late-stage assembly of the Cox12p and Cox13p subunits and for cytochrome c oxidase activity; required for growth under hypoxic conditions; member of the hypoxia induced gene family; C. elegans and human orthologs are functional in yeast","termid":"PBO:0082924"}


id: PBO:0004961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (predicted)","termid":"PBO:0004961"}


id: PBO:0030002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enlarged_P-bodies","termid":"PBO:0030002"}


id: GO:1904470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelin production.","definition_xrefs":["PMID:15560120","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"endothelin production","termid":"GO:1990775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of endothelin production","synonyms":[{"name":"regulation of EDN1 secretion","type":"narrow"},{"name":"regulation of EDN2 secretion","type":"narrow"},{"name":"regulation of EDN3 secretion","type":"narrow"},{"name":"regulation of endothelin secretion","type":"narrow"},{"name":"regulation of endothelin-1 secretion","type":"narrow"},{"name":"regulation of endothelin-2 secretion","type":"narrow"},{"name":"regulation of endothelin-3 secretion","type":"narrow"}],"termid":"GO:1904470"}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12655293","PMID:12628743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: GO:0050648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5(S)-hydroxyperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050648"}


id: PR:Q9P7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C186.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.01","synonyms":[{"name":"Spom972h-pfl9","type":"exact"}],"termid":"PR:Q9P7Q2"}


id: PBO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YER025W","termid":"PBO:0017968"}


id: PBO:0049684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD antisense growth-associated long non-coding RNA","termid":"PBO:0049684"}


id: PBO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioblastoma down-regulated RNA","termid":"PBO:0048686"}


id: PBO:0053183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 8","termid":"PBO:0053183"}


id: PBO:0066938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 240","termid":"PBO:0066938"}


id: PBO:0084282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein of the Golgi; required for targeting of the Arf-like GTPase Arl3p to the Golgi; multicopy suppressor of ypt6 null mutation","termid":"PBO:0084282"}


id: PBO:0085560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT4, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085560"}


id: GO:0090218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"},{"relation_name":"is_a","term_name":"regulation of lipid kinase activity","termid":"GO:0043550"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of lipid kinase activity","termid":"GO:0090218"}


id: GO:0048650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caste determination","termid":"GO:0048648"},{"relation_name":"is_a","term_name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination, influence by environmental factors","termid":"GO:0048650"}


id: PBO:0057654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1246","termid":"PBO:0057654"}


id: MOD:01766
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01766"}


id: PBO:0034274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_start_sequence","termid":"PBO:0034274"}


id: MOD:00765
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(L-cysteinyl)-L-cysteine, forming a disulfide bond with free cysteine.","definition_xrefs":["PubMed:2001356","DeltaMass:260","PubMed:1988019","PubMed:366603","Unimod:312","PubMed:8344916","PubMed:7918467","PubMed:2076469","RESID:AA0025#CYS1","PubMed:3083866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinylation (disulfide with free L-cysteine)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cysteinylation","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"MOD_RES S-cysteinyl cysteine","type":"exact"},{"name":"S-cystenyl cystenyl","type":"exact"},{"name":"SCysCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00765"}


id: GO:0141131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + an N6-methyl-2'-deoxyadenosine in DNA + O2 = a 2'-deoxyadenosine in DNA + CO2 + formaldehyde + succinate.","definition_xrefs":["RHEA:49524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"DNA N6-methyladenine demethylase activity","secondary_identifiers":["EC:1.14.11.51"],"synonyms":[{"name":"DNA N(6)-methyladenine demethylase activity","type":"exact"}],"termid":"GO:0141131"}


id: PATO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractile quality inhering in a bearer by virtue of the bearer's elastic tension that facilitate response to stimuli.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonicity","secondary_identifiers":["PATO:0001498"],"synonyms":[{"name":"tone","type":"exact"}],"termid":"PATO:0001439"}


id: GO:0071851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during G1 phase, as a result of deprivation of nitrogen.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:0071851)","synonyms":[{"name":"G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:0071851"}


id: GO:0044377
data:
  {"annotated_genes":["SJAG_04009","SJAG_05153"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103136,104888],"is_not":false,"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:pg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04009":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0000976","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter region sequence-specific DNA binding, bending","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding, bending","type":"related"}],"termid":"GO:0044377","terms_by_termid":{"GO:0044377":null}}


id: GO:0110043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode pharynx morphogenesis.","definition_xrefs":["GOC:rz","PMID:20805556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharynx morphogenesis","termid":"GO:0110041"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"positively_regulates","term_name":"nematode pharynx morphogenesis","termid":"GO:0110040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode pharynx morphogenesis","termid":"GO:0110043"}


id: GO:1905533
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84230],"is_not":false,"summary":null,"term":"GO:1905533"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:10467003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-leucine import across plasma membrane","termid":"GO:1905532"},{"relation_name":"negatively_regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903129"],"synonyms":[{"name":"down regulation of L-leucine import into cell","type":"exact"},{"name":"down-regulation of L-leucine import into cell","type":"exact"},{"name":"downregulation of L-leucine import into cell","type":"exact"},{"name":"inhibition of leucine import into cell","type":"narrow"},{"name":"negative regulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905533","terms_by_termid":{"GO:1905533":null}}


id: PBO:0031430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycerol_dehydrogenase_activity","termid":"PBO:0031430"}


id: FYPO:0000071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aureobasidin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to aureobasidin A","synonyms":[{"name":"resistance to AbA","type":"exact"},{"name":"resistance to aureobasidin A during mitotic cell cycle","type":"related"},{"name":"resistance to aureobasidin A during vegetative growth","type":"exact"},{"name":"resistant to aureobasidin A","type":"exact"}],"termid":"FYPO:0000071"}


id: PBO:0055778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 2, peroxisomal","termid":"PBO:0055778"}


id: PBO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup131","termid":"PBO:0003411"}


id: GO:0033614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the chloroplast thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0007005","GO:0008150"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex assembly","termid":"GO:0033614"}


id: GO:0018493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formylmethanofuran + A + H2O + H+ = AH(2) + CO2 + methanofuran.","definition_xrefs":["RHEA:19841","EC:1.2.7.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formylmethanofuran dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03015","MetaCyc:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0345"],"synonyms":[{"name":"formylmethanofuran:(acceptor) oxidoreductase activity","type":"related"},{"name":"formylmethanofuran:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0018493"}


id: PBO:0076909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 1","termid":"PBO:0076909"}


id: PBO:0049485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 1","termid":"PBO:0049485"}


id: GO:0090136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an epithelial cell to another epithelial cell via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"epithelial cell-cell adhesion","termid":"GO:0090136"}


id: PBO:0055675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase E, hormone sensitive type","termid":"PBO:0055675"}


id: PBO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex CAF1 family ribonuclease subunit Caf1","termid":"PBO:0005706"}


id: PBO:0051800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 2","termid":"PBO:0051800"}


id: PBO:0002987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase(predicted)","termid":"PBO:0002987"}


id: PBO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1B","termid":"PBO:0071801"}


id: PBO:0057860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3171","termid":"PBO:0057860"}


id: GO:0019200
data:
  {"annotated_genes":["SJAG_00039","SJAG_02950","SJAG_04495","SJAG_02713","SJAG_04334","SJAG_00605","SJAG_04276","SJAG_03336","SJAG_02596","SJAG_03174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88960,85104,97470,96039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003873"},{"annotations":[100557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003872"},{"annotations":[115061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004856"},{"annotations":[94106,90638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008865"},{"annotations":[109808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004335"},{"annotations":[90639,94107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004340"},{"annotations":[90640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004396"},{"annotations":[90641,94108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019158"},{"annotations":[100448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004747"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to a carbohydrate substrate molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00605":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_02950":null,"SJAG_03174":null,"SJAG_03336":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbohydrate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8931653"],"termid":"GO:0019200","terms_by_termid":{"GO:0003872":null,"GO:0003873":null,"GO:0004335":null,"GO:0004340":null,"GO:0004396":null,"GO:0004747":null,"GO:0004856":null,"GO:0008865":null,"GO:0019158":null}}


id: GO:0160178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a dipeptide across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dipeptide uniporter activity","termid":"GO:0160178"}


id: PBO:0053812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1072","termid":"PBO:0053812"}


id: PBO:0031511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_nitrogen_starvation","termid":"PBO:0031511"}


id: PBO:0091607
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Important For Sex","termid":"PBO:0091607"}


id: PBO:0027428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_converged_replication_forks","termid":"PBO:0027428"}


id: GO:0009065
data:
  {"annotated_genes":["SJAG_00495","SJAG_03398","SJAG_00881","SJAG_03434","SJAG_01903","SJAG_00937","SJAG_02235","SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[93454,109281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[93455,102847,109282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[102063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[78462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[88860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006562"},{"annotations":[114047,103198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00881":null,"SJAG_00937":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02309":null,"SJAG_03398":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glutamine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine family amino acid breakdown","type":"exact"},{"name":"glutamine family amino acid catabolism","type":"exact"},{"name":"glutamine family amino acid degradation","type":"exact"}],"termid":"GO:0009065","terms_by_termid":{"GO:0006530":null,"GO:0006538":null,"GO:0006540":null,"GO:0006562":null,"GO:0010121":null,"GO:0010133":null,"GO:0019544":null,"GO:0019547":null}}


id: PBO:0081031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11C","termid":"PBO:0081031"}


id: GO:0008663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 2',3'-cyclic phosphate + H2O = nucleoside 3'-phosphate.","definition_xrefs":["EC:3.1.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 2'-phosphodiesterase activity","secondary_identifiers":["MetaCyc:CYCPHOSDIESTER-RXN","RHEA:19621"],"synonyms":[{"name":"2',3 '-cyclic AMP phosphodiesterase activity","type":"related"},{"name":"2',3'-cyclic AMP 2'-phosphohydrolase activity","type":"related"},{"name":"2',3'-cyclic nucleoside monophosphate phosphodiesterase","type":"broad"},{"name":"2',3'-cyclic nucleotidase activity","type":"related"},{"name":"2',3'-cyclic nucleotide phosphohydrolase","type":"broad"},{"name":"2':3'-cyclic nucleotide phosphodiesterase:3'-nucleotidase activity","type":"related"},{"name":"2':3'-cyclic phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide 2'-phosphodiesterase activity","type":"related"},{"name":"cyclic 2',3'-nucleotide phosphodiesterase","type":"broad"},{"name":"cyclic phosphodiesterase:3'-nucleotidase activity","type":"related"},{"name":"nucleoside-2',3'-cyclic-phosphate 3'-nucleotidohydrolase activity","type":"related"},{"name":"ribonucleoside 2',3'-cyclic phosphate diesterase activity","type":"related"}],"termid":"GO:0008663"}


id: PBO:0081993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 23","termid":"PBO:0081993"}


id: PBO:0081330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 131","termid":"PBO:0081330"}


id: GO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-gamma-glutamyl-L-propargylglycine + O2 = CO2 + L-gamma-glutamyl-(3R)-L-beta-ethynylserine + succinate.","definition_xrefs":["RHEA:59900","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-gamma-glutamyl-L-propargylglycine hydroxylase activity","termid":"GO:0062148"}


id: PBO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule","termid":"PBO:0042366"}


id: PBO:0004703
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gcp Four Homolog","termid":"PBO:0004703"}


id: PBO:0045770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 1","termid":"PBO:0045770"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: PBO:0058078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4296","termid":"PBO:0058078"}


id: PBO:0078533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 26","termid":"PBO:0078533"}


id: PBO:0077736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 3","termid":"PBO:0077736"}


id: PBO:0084074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; activated by increased levels of glycolysis intermediate fructose-1,6-bisphosphate; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication","termid":"PBO:0084074"}


id: PBO:0034244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_output_(obsolete_RO:0002403)","termid":"PBO:0034244"}


id: PBO:0044003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSMD2 antisense RNA 1","termid":"PBO:0044003"}


id: PBO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp2 (predicted)","termid":"PBO:0005382"}


id: SO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U12 small nuclear (snRNA), together with U4atac/U6atac, U5, and U11 snRNAs and associated proteins, forms a spliceosome that cleaves a divergent class of low-abundance pre-mRNA introns.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U12_snRNA"],"synonyms":[{"name":"U12 small nuclear RNA","type":"exact"},{"name":"U12 snRNA","type":"exact"},{"name":"small nuclear RNA U12","type":"exact"},{"name":"snRNA U12","type":"exact"}],"termid":"SO:0000399"}


id: PR:O13674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 24 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC74.09","synonyms":[{"name":"Spom972h-mug24","type":"exact"}],"termid":"PR:O13674"}


id: PBO:0082804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart; interacts with mRNA in commitment complex","termid":"PBO:0082804"}


id: GO:0031078
data:
  {"annotated_genes":["SJAG_03844","SJAG_04039","SJAG_04186","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100291,105548,108189],"is_not":false,"summary":null,"term":"GO:0031078"},{"annotations":[86179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + H2O = histone H3 L-lysine (position 14) + acetate. This reaction represents the removal of an acetyl group from lysine at position 14 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0033558","GO:0019213","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3K14 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 deacetylase activity","type":"exact"},{"name":"histone deacetylase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0031078","terms_by_termid":{"GO:0031078":null,"GO:0032041":null}}


id: PBO:0064595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox associating factor 1","termid":"PBO:0064595"}


id: PBO:0070402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP2 activator of ARL3 GTPase","termid":"PBO:0070402"}


id: PBO:0064787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1G","termid":"PBO:0064787"}


id: GO:0050760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme thymidylate synthase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of thymidylate synthase biosynthetic process (obsolete GO:0050760)","synonyms":[{"name":"down regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"down-regulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"downregulation of thymidylate synthase biosynthetic process","type":"exact"},{"name":"inhibition of thymidylate synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of thymidylate synthase anabolism","type":"exact"},{"name":"negative regulation of thymidylate synthase biosynthesis","type":"exact"},{"name":"negative regulation of thymidylate synthase formation","type":"exact"},{"name":"negative regulation of thymidylate synthase synthesis","type":"exact"}],"termid":"GO:0050760"}


id: PBO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein complex assembly protein","termid":"PBO:0090337"}


id: PBO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediately_precedes","termid":"PBO:0034112"}


id: GO:0007039
data:
  {"annotated_genes":["SJAG_04785","SJAG_01868","SJAG_00534","SJAG_03385","SJAG_01072","SJAG_03586","SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83616,87920,89072,90573,93504,112896],"is_not":false,"summary":null,"term":"GO:0007039"},{"annotations":[95490],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein in the vacuole, usually by the action of vacuolar proteases.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01072":null,"SJAG_01868":null,"SJAG_03385":null,"SJAG_03586":null,"SJAG_04785":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar protein breakdown","type":"related"},{"name":"vacuolar protein catabolic process","type":"related"},{"name":"vacuolar protein catabolism","type":"related"},{"name":"vacuolar protein degradation","type":"related"}],"termid":"GO:0007039","terms_by_termid":{"GO:0007039":null,"GO:1904352":null}}


id: GO:0007339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm-egg recognition","termid":"GO:0035036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"binding of sperm to zona pellucida","synonyms":[{"name":"ZPG binding","type":"related"}],"termid":"GO:0007339"}


id: SO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a polypeptide, involved in the transition from one conformational state to another.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"conformational_switch","synonyms":[{"name":"polypeptide conformational switch","type":"exact"}],"termid":"SO:0001422"}


id: PBO:0087793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-ligase and SUMO-targeted metalloprotease; involved in DNA repair; removes DNA-protein crosslinks at stalled replication forks during replication of damaged DNA; clears chromatin-bound sumoylated proteins; localizes to single spot on nuclear periphery of mother cells but not daughters; exhibits vacuolar localization upon genotoxic stress; activated by DNA binding; member of minigluzincins protease family with mammalian DVC1/Spartan","termid":"PBO:0087793"}


id: PBO:0049266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin E","termid":"PBO:0049266"}


id: PBO:0081645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 571","termid":"PBO:0081645"}


id: PBO:0067668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 847, pseudogene","termid":"PBO:0067668"}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: MOD:01792
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal O4'-phospho-L-tyrosine residue to tyrosine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosine immonium ion","synonyms":[{"name":"2-(4-phosphonoxyphenyl)ethaniminium","type":"exact"}],"termid":"MOD:01792"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: GO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in alpha- and beta-limit dextrins of amylopectin and glycogen, and in amylopectin and pullulan.","definition_xrefs":["EC:3.2.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"limit dextrinase activity","secondary_identifiers":["MetaCyc:3.2.1.142-RXN"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"amylopectin-1,6-glucosidase activity","type":"related"},{"name":"dextrin alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0010303"}


id: GO:1905510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myosin II filament assembly.","definition_xrefs":["PMID:27237792","PMID:7691416","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of myosin II filament assembly","termid":"GO:0043520"},{"relation_name":"is_a","term_name":"negative regulation of myosin II filament organization","termid":"GO:1904900"},{"relation_name":"negatively_regulates","term_name":"myosin II filament assembly","termid":"GO:0031036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"negative regulation of myosin II filament assembly","synonyms":[{"name":"down regulation of myosin II filament assembly","type":"exact"},{"name":"down regulation of myosin II polymerization","type":"related"},{"name":"down-regulation of myosin II filament assembly","type":"exact"},{"name":"down-regulation of myosin II polymerization","type":"related"},{"name":"downregulation of myosin II filament assembly","type":"exact"},{"name":"downregulation of myosin II polymerization","type":"related"},{"name":"inhibition of myosin II filament assembly","type":"narrow"},{"name":"inhibition of myosin II polymerization","type":"related"},{"name":"negative regulation of myosin II polymerization","type":"related"}],"termid":"GO:1905510"}


id: GO:0046856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphatidylinositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"},{"relation_name":"is_a","term_name":"phospholipid dephosphorylation","termid":"GO:0046839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol dephosphorylation","secondary_identifiers":["GO:0046840"],"synonyms":[{"name":"PIP catabolism","type":"narrow"},{"name":"PtdInsP catabolism","type":"narrow"},{"name":"PtdInsP dephosphorylation","type":"narrow"},{"name":"phosphatidylinositol phosphate catabolic process","type":"narrow"},{"name":"phosphatidylinositol phosphate dephosphorylation","type":"narrow"},{"name":"phosphoinositide dephosphorylation","type":"exact"}],"termid":"GO:0046856"}


id: PBO:0087547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; linker between TauB and TauA domains; human homolog is TFIIIC-90","termid":"PBO:0087547"}


id: PBO:0065744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYD and CARD domain containing","termid":"PBO:0065744"}


id: PBO:0081263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 1","termid":"PBO:0081263"}


id: PBO:0058155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4450","termid":"PBO:0058155"}


id: PBO:0084948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multigene complex, polymeric locus for maltose fermentation; encodes the MAL23 trans-acting MAL-activator, MAL21 maltose permease, and MAL22 maltase; on the right arm of Chromosome III, but not in strain S288C","termid":"PBO:0084948"}


id: GO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine and threonine metabolic process (obsolete GO:0018927)","synonyms":[{"name":"methionine and threonine metabolic process","type":"exact"}],"termid":"GO:0018927"}


id: GO:0018838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-mandelate = (R)-mandelate.","definition_xrefs":["EC:5.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"mandelate racemase activity","secondary_identifiers":["RHEA:13945","UM-BBD_reactionID:r0091","MetaCyc:MANDELATE-RACEMASE-RXN"],"termid":"GO:0018838"}


id: FYPO:0003554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of degradation of RNA transcribed from middle meiotic genes is increased during late meiosis. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:20531409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA catabolic process","termid":"FYPO:0003553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"increased degradation of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased breakdown of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased catabolism of middle meiotic gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased degradation of middle meiotic gene mRNA during late meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003554"}


id: GO:1900689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of gliotoxin biosynthetic process","synonyms":[{"name":"regulation of gliotoxin anabolism","type":"exact"},{"name":"regulation of gliotoxin biosynthesis","type":"exact"},{"name":"regulation of gliotoxin formation","type":"exact"},{"name":"regulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900689"}


id: PBO:0087641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GET complex; involved in insertion of proteins into the ER membrane; required for the retrieval of HDEL proteins from the Golgi to the ER in an ERD2 dependent fashion and for normal mitochondrial morphology and inheritance","termid":"PBO:0087641"}


id: PR:O13919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A paired amphipathic helix protein Sin3b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.15","secondary_identifiers":["UniProtKB:O13919"],"synonyms":[{"name":"SIN3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SIN3B","type":"exact"}],"termid":"PR:O13919"}


id: GO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}


id: GO:0006864
data:
  {"annotated_genes":["SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyrimidine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006864","terms_by_termid":{"GO:1990519":null}}


id: PBO:0065112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C gamma","termid":"PBO:0065112"}


id: PBO:0062117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 16","termid":"PBO:0062117"}


id: PBO:0063152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator","termid":"PBO:0063152"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:tb","PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"activation of prostate induction by androgen receptor signaling pathway","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: PBO:0058328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4701","termid":"PBO:0058328"}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: PBO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 16","termid":"PBO:0072139"}


id: GO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cardiac muscle thin filament assembly","termid":"GO:0071691"}


id: GO:1902064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in spermatogenesis.","definition_xrefs":["GOC:TermGenie","PMID:22570621","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spermatogenesis (obsolete GO:1902064)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in generation of spermatozoa","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in spermatogenesis","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in generation of spermatozoa","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in spermatogenesis","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in generation of spermatozoa","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in spermatogenesis","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in generation of spermatozoa","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in spermatogenesis","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in generation of spermatozoa","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in generation of spermatozoa","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in spermatogenesis","type":"related"}],"termid":"GO:1902064"}


id: PBO:0066370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 13","termid":"PBO:0066370"}


id: PBO:0091697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermidine transmembrane transporter Mfs3","termid":"PBO:0091697"}


id: PBO:0051657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 2","termid":"PBO:0051657"}


id: MOD:00811
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively forms a O3-mannosylthreonine","definition_xrefs":["RESID:AA0403","PubMed:391559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"O-hexosylated threonine","termid":"MOD:01348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-mannosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(alpha-D-mannopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"CARBOHYD O-linked (Man) threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O-mannosyl-L-threonine","type":"exact"},{"name":"O3-mannosylthreonine","type":"exact"},{"name":"OManThr","type":"exact"}],"termid":"MOD:00811"}


id: GO:1905942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["GOC:TermGenie","PMID:19737525","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"}


id: GO:1990768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of blood through the gastric mucosa of an animal, enabling the transport of nutrients and the removal of waste products.","definition_xrefs":["PMID:10807413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric mucosal blood circulation","synonyms":[{"name":"stomach mucosal blood circulation","type":"exact"}],"termid":"GO:1990768"}


id: PBO:0038592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 10","termid":"PBO:0038592"}


id: GO:0036130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 + NADPH + H+ -> prostaglandin F2alpha + NADP+. This reaction is the reduction of prostaglandin H2 ((5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate) to prostaglandin F2alpha ((5Z,13E)-(15S)-9alpha,11alpha,15-Trihydroxyprosta-5,13-dienoate).","definition_xrefs":["PMID:16475787","GOC:mw","PMID:14979715","PMID:10622721","KEGG_REACTION:R02264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"prostaglandin H2 endoperoxidase reductase activity","secondary_identifiers":["Reactome:R-HSA-2161549","RHEA:45312"],"synonyms":[{"name":"PGH2 9,11-endoperoxidase","type":"exact"},{"name":"PGH2 9-,11-endoperoxide reductase","type":"exact"}],"termid":"GO:0036130"}


id: PBO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRde-Like","termid":"PBO:0004445"}


id: PR:P23635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa1 gene.","definition_xrefs":["UniProtKB:P23635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minor serine/threonine-protein phosphatase PP2A-1 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.15","synonyms":[{"name":"Spom972h-ppa1","type":"exact"}],"termid":"PR:P23635"}


id: PBO:0088359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4","termid":"PBO:0088359"}


id: PBO:0053857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1127","termid":"PBO:0053857"}


id: PBO:0064970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 26","termid":"PBO:0064970"}


id: PBO:0049845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 6","termid":"PBO:0049845"}


id: PBO:0062724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 1","termid":"PBO:0062724"}


id: PBO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_biotin_import","termid":"PBO:0030460"}


id: GO:0036082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when extracellular phenylacetaldehyde has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:sart","PMID:19135896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"extracellular phenylacetaldehyde-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular phenylacetaldehyde-gated ion channel activity","type":"broad"},{"name":"ionotropic phenylacetaldehyde receptor activity","type":"related"}],"termid":"GO:0036082"}


id: PR:O14109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- maf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III transcription maf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.12c","synonyms":[{"name":"Spom972h-maf1","type":"exact"}],"termid":"PR:O14109"}


id: FYPO:0000629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis is abnormal. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal apoptotic process","synonyms":[{"name":"abnormal apoptosis","type":"narrow"}],"termid":"FYPO:0000629"}


id: PBO:0069854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1140, pseudogene","termid":"PBO:0069854"}


id: PBO:0030776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ethanol","termid":"PBO:0030776"}


id: PBO:0084751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix acyl carrier protein; involved in biosynthesis of octanoate, which is a precursor to lipoic acid; coordinates mitochondrial fatty acid and iron sulfur cluster metabolism; activated by phosphopantetheinylation catalyzed by Ppt2p","termid":"PBO:0084751"}


id: PBO:0005664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gut2 (predicted)","termid":"PBO:0005664"}


id: PBO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geminin coiled-coil domain containing","termid":"PBO:0048772"}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: GO:2001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-tagatose 6-phosphate metabolic process","termid":"GO:2001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate catabolic process","secondary_identifiers":["UniPathway:UPA00704"],"synonyms":[{"name":"D-tagatose 6-phosphate catabolism","type":"exact"}],"termid":"GO:2001059"}


id: PR:P25457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11524:SF5","PRO:DNx","OMA:SCHPO01432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.07","secondary_identifiers":["UniProtKB:P25457"],"synonyms":[{"name":"Spom972h-RPL7","type":"exact"}],"termid":"PR:P25457"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: GO:1990165
data:
  {"annotated_genes":["SJAG_16460","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91984,111751],"is_not":false,"summary":null,"term":"GO:1990165"}]},"cv_name":"molecular_function","definition":"Binding to damaged DNA containing single-strand breaks (SSBs).","definition_xrefs":["PMID:21984210","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04410":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"single-strand break-containing DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SSB-containing DNA binding","type":"exact"},{"name":"single-strand break-containing damaged DNA binding","type":"exact"}],"termid":"GO:1990165","terms_by_termid":{"GO:1990165":null}}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: GO:1901086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzylpenicillin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"benzylpenicillin metabolic process","synonyms":[{"name":"benzylpenicillin metabolism","type":"exact"},{"name":"penicillin G metabolism","type":"exact"}],"termid":"GO:1901086"}


id: _global:acts_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of","secondary_identifiers":["RO:0002263"],"termid":"_global:acts_upstream_of"}


id: PBO:0039802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1","termid":"PBO:0039802"}


id: PBO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 2B, pseudogene","termid":"PBO:0048014"}


id: PBO:0090792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein Pab2","termid":"PBO:0090792"}


id: SO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding leucyl tRNA (SO:0000264).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine_tRNA_primary_transcript","synonyms":[{"name":"leucine tRNA primary transcript","type":"exact"}],"termid":"SO:0000221"}


id: PBO:0066260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 3","termid":"PBO:0066260"}


id: GO:0120003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A narrow rim of non-thickened membrane in between urothelial plaques in apical plasma membrane.","definition_xrefs":["GOC:krc","PMID:21887288","PMID:21468280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"hinge region between urothelial plaques of apical plasma membrane","termid":"GO:0120003"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: GO:0004275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys6-Ile7 bond in trypsinogen.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete enteropeptidase activity (obsolete GO:0004275)","synonyms":[{"name":"enterokinase activity","type":"related"},{"name":"enteropeptidase activity","type":"exact"}],"termid":"GO:0004275"}


id: PBO:0062759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 4","termid":"PBO:0062759"}


id: PBO:0004428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV assembly protein Cox20 (predicted)","termid":"PBO:0004428"}


id: GO:0006402
data:
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otations":[91732],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1990074"},{"annotations":[102732],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[97103,100990,85826],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060213"},{"annotations":[112699],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061013"},{"annotations":[113342,84547],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043488"},{"annotations":[87626,85928,86316],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000815"},{"annotations":[94615],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"mRNA metabolic 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id: GO:0042349
data:
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id: GO:0051303
data:
  {"annotated_genes":["SJAG_01837","SJAG_02737","SJAG_03698","SJAG_07002","SJAG_04623","SJAG_05220","SJAG_03287","SJAG_01613","SJAG_03126","SJAG_00082","SJAG_02286","SJAG_03327","SJAG_04040","SJAG_01775","SJAG_01297","SJAG_01211","SJAG_03220","SJAG_05196","SJAG_03048","SJAG_00418","SJAG_02346","SJAG_05226","SJAG_05260","SJAG_00930","SJAG_03680","SJAG_00794","SJAG_03685","SJAG_05290","SJAG_04140","SJAG_03989","SJAG_03092","SJAG_02336","SJAG_03437","SJAG_03540","SJAG_01082","SJAG_02761","SJAG_01805","SJAG_04508","SJAG_01370","SJAG_00302","SJAG_03543","SJAG_02624","SJAG_05019","SJAG_00335","SJAG_05319","SJAG_02731","SJAG_01278","SJAG_03217","SJAG_05295","SJAG_01263","SJAG_01777","SJAG_00918","SJAG_04280","SJAG_02814","SJAG_00756","SJAG_00768","SJAG_03683","SJAG_04259","SJAG_02451","SJAG_04412","SJAG_04884","SJAG_02045","SJAG_00678","SJAG_01538","SJAG_04745","SJAG_03926","SJAG_04076","SJAG_00207","SJAG_01224","SJAG_01601","SJAG_05266","SJAG_01371","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112738],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[84011,89934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[105984,84144,96478,91412,101554,109856,114182,114699,106432,98534,87490,83898,87103,106389,86163,107758,94719,91666,94010,97426,112596],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[113121,89898,83957,103903,111596,86406,94720,109858,97427],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[104334],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[102024,85891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[85892,98915,83543,96012,101179],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[83544,113743,92820,113607,102025,112010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[110063,102026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[90875,105985],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[104338,99995,94722,90303,95325],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[104961,87091,109307,98536,112982,99645,96615,104339,108694,94724,95224,98110,108695,98111,112741,98112,89936,85487,90304,99996,114729,85874,108693,85269,110167,105969,109860,94723,110566,103585],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98461],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[112076,101255,108036],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[112750,107277,86122,98480,89910],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[112753],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[112754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"},{"annotations":[105223],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[101557,87093,94011,85271,96617,104963,89915,85876,105971,112984,109308,91417,106433,111992,103587,103907,91667,94728,97431,106392,110169,105224,98537],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[113013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle 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of chromosome localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome positioning","type":"exact"},{"name":"establishment of chromosome localisation","type":"exact"}],"termid":"GO:0051303","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0070197":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140405":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: MOD:00416
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A change resulting in an alteration of the measured molecular mass of a peptide or protein hydroxyl amino acid phosphorylated promptly followed by secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with neutral loss of phosphate","termid":"MOD:00432"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00416"}


id: MOD:01682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-cysteine residue with one methyl group.","definition_xrefs":["Unimod:34#C","OMSSA:73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated cysteine","termid":"MOD:00660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-cysteine","synonyms":[{"name":"Me1Cys","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methylc","type":"exact"}],"termid":"MOD:01682"}


id: PBO:0083594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR070C has a paralog, YHR214C-B, that arose from a segmental duplication","termid":"PBO:0083594"}


id: GO:0051653
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93080,113009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process in which is the spindle is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"spindle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of spindle localization","type":"exact"},{"name":"spindle localisation","type":"exact"}],"termid":"GO:0051653","terms_by_termid":{"GO:0000132":null}}


id: PBO:0045308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3A pseudogene 1","termid":"PBO:0045308"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: PBO:0084268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p","termid":"PBO:0084268"}


id: GO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045846"],"synonyms":[{"name":"activation of natural killer cell mediated immunity","type":"narrow"},{"name":"positive regulation of NK cell activity","type":"related"},{"name":"positive regulation of NK cell mediated immunity","type":"exact"},{"name":"positive regulation of natural killer cell activity","type":"related"},{"name":"stimulation of natural killer cell mediated immunity","type":"narrow"},{"name":"up regulation of natural killer cell mediated immunity","type":"exact"},{"name":"up-regulation of natural killer cell mediated immunity","type":"exact"},{"name":"upregulation of natural killer cell mediated immunity","type":"exact"}],"termid":"GO:0002717"}


id: PR:P78972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slp1 gene.","definition_xrefs":["UniProtKB:P78972","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein slp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.08c","synonyms":[{"name":"Spom972h-slp1","type":"exact"}],"termid":"PR:P78972"}


id: GO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061129"}


id: PBO:0070761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 17","termid":"PBO:0070761"}


id: GO:1903675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"negative regulation of cap-dependent translational initiation","synonyms":[{"name":"down regulation of cap-dependent translational initiation","type":"exact"},{"name":"down-regulation of cap-dependent translational initiation","type":"exact"},{"name":"downregulation of cap-dependent translational initiation","type":"exact"},{"name":"inhibition of cap-dependent translational initiation","type":"narrow"}],"termid":"GO:1903675"}


id: PBO:0076196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 5","termid":"PBO:0076196"}


id: GO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"butanoyltransferase activity","termid":"GO:0034326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"O-butanoyltransferase activity","termid":"GO:0034323"}


id: PBO:0063606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4","termid":"PBO:0063606"}


id: PBO:0080025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 11","termid":"PBO:0080025"}


id: PBO:0080695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 2B","termid":"PBO:0080695"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:25798942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: PBO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protease_inhibitor","termid":"PBO:0030510"}


id: GO:0001192
data:
  {"annotated_genes":["SJAG_00119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001193"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation on a DNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00119":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001194"],"synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from bacterial-type RNA polymerase promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001192","terms_by_termid":{"GO:0001193":null}}


id: FYPO:0004735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node","termid":"FYPO:0003919"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0007027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0004735"}


id: PBO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin Z","termid":"PBO:0044213"}


id: PBO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 97","termid":"PBO:0042044"}


id: PBO:0068287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit C pseudogene 1","termid":"PBO:0068287"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: PBO:0065361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 2","termid":"PBO:0065361"}


id: PBO:0078786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 10-1","termid":"PBO:0078786"}


id: PBO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7A","termid":"PBO:0072743"}


id: FYECO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which N-acetyl-L-cysteine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ N-acetyl-L-cysteine","synonyms":[{"name":"NAC added","type":"exact"},{"name":"acetylcysteine added","type":"exact"}],"termid":"FYECO:0000119"}


id: GO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-dehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"protein dehydration","termid":"GO:0018249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}


id: PBO:0054456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1853","termid":"PBO:0054456"}


id: GO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + azole(in) = H+(in) + azole(out). Azoles are heterocyclic compounds found in many biologically important substances.","definition_xrefs":["ISBN:3527307206","Wikipedia:Azole","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"azole:proton antiporter activity","synonyms":[{"name":"azole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0045119"}


id: PBO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic suppressor protein Ste7","termid":"PBO:0000377"}


id: GO:0060234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neuroblast splits off of a neurectodermal sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuroblast delamination","termid":"GO:0060234"}


id: PBO:0079301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin","termid":"PBO:0079301"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: GO:0141042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production by a symbiont of high levels of cyclic AMP in a host cell, impairing host cellular functions in multiple ways, including ATP depletion, interference with host intracellular signaling, cytoskeletal defects and apoptosis-related cell death. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27731909","PMID:19516256","PMID:16390441","PMID:33013916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cAMP intoxication of host cell","synonyms":[{"name":"cAMP intoxication in host","type":"exact"}],"termid":"GO:0141042"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: SO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, one of two segments of homology found at all three mating loci (HML, MAT, and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z1_region","synonyms":[{"name":"Z1-region","type":"exact"}],"termid":"SO:0002002"}


id: PBO:0071211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 52","termid":"PBO:0071211"}


id: GO:0090288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"negatively_regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"}


id: FYPO:0007802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form linear element that are shorter than normal.","definition_xrefs":["PMID:33825974","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal linear element morphology","termid":"FYPO:0004585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"short linear element","synonyms":[{"name":"decreased linear element length","type":"exact"},{"name":"reduced linear element length","type":"exact"}],"termid":"FYPO:0007802"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["EC:2.3.1.19","RHEA:20892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["KEGG_REACTION:R01174","MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: PBO:0053141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6C, pseudogene","termid":"PBO:0053141"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: GO:1902611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a N-phenylthiourea stimulus.","definition_xrefs":["GOC:rjd","GO_REF:0000071","GOC:TermGenie","PMID:24006265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to N-phenylthiourea","termid":"GO:1902610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to N-phenylthiourea","termid":"GO:1902611"}


id: PBO:0059689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 55","termid":"PBO:0059689"}


id: GO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex, in which the complex is formed through interaction of the protein(s) with a interferon-stimulated response element (ISRE) in the DNA.","definition_xrefs":["GOC:amm","PMID:11747630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein-DNA ISRE complex assembly","synonyms":[{"name":"protein-DNA interferon-stimulated response element complex assembly","type":"exact"}],"termid":"GO:0035362"}


id: GO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + NADP+ + pyruvate = acetyl-CoA + CO2 + NADPH.","definition_xrefs":["RHEA:17425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.2.1.51","KEGG_REACTION:R00210","MetaCyc:PYRUVATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"pyruvate:NADP(+) oxidoreductase activity","type":"related"},{"name":"pyruvate:NADP+ 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050243"}


id: PBO:0044710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 1","termid":"PBO:0044710"}


id: PBO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.-","termid":"PBO:0000865"}


id: GO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear envelope lumen","secondary_identifiers":["GO:0005653"],"synonyms":[{"name":"nuclear intermembrane space","type":"exact"},{"name":"nuclear membrane lumen","type":"related"},{"name":"perinuclear space","type":"exact"}],"termid":"GO:0005641"}


id: PBO:0069544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 815, pseudogene","termid":"PBO:0069544"}


id: FYPO:0004925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the outer surface of the ascospore wall is rougher and less regular than normal.","definition_xrefs":["PMID:20410137","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore wall morphology","termid":"FYPO:0003138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0000631","FYPO:0000121","FYPO:0001985"],"is_obsolete":false,"name":"irregular ascospore wall","synonyms":[{"name":"irregular ascospore wall surface texture","type":"exact"},{"name":"irregular spore wall","type":"exact"},{"name":"rough ascospore wall","type":"exact"}],"termid":"FYPO:0004925"}


id: PBO:0083701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated chaperone involved in protein targeting; redirects mitochondrial membrane protein precursors to mitochondrial translocation system; required for peroxisomal protein import and involved in peroxisome assembly; facilitates import of Mim1p and Mim2p into the mitochondrial outer membrane; homologous to E. coli DnaJ","termid":"PBO:0083701"}


id: GO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of a compartment boundary","synonyms":[{"name":"compartment boundary formation","type":"exact"}],"termid":"GO:0060288"}


id: GO:0042276
data:
  {"annotated_genes":["SJAG_03906","SJAG_02667","SJAG_00611","SJAG_00153","SJAG_00573","SJAG_04190","SJAG_16460","SJAG_04089","SJAG_04791"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91979,95403,98974,98994,100082,100322,109640,113377],"is_not":false,"summary":null,"term":"GO:0042276"},{"annotations":[107835],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions and causes an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites.","definition_xrefs":["GOC:jl","GOC:elh","PMID:11485998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_02667":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"error-prone postreplication DNA repair","type":"related"},{"name":"mutagenic PRR","type":"exact"},{"name":"mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:0042276","terms_by_termid":{"GO:0042276":null,"GO:1904332":null}}


id: GO:0033022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cyclopentanol.","definition_xrefs":["GOC:mah","PMID:12406764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclopentanol metabolic process","termid":"GO:0033020"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclopentanol catabolic process","synonyms":[{"name":"cyclopentanol breakdown","type":"exact"},{"name":"cyclopentanol catabolism","type":"exact"},{"name":"cyclopentanol degradation","type":"exact"}],"termid":"GO:0033022"}


id: GO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Receptor editing occurring in B cells in the bone marrow.","definition_xrefs":["PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0010467","GO:0006259"],"is_obsolete":false,"name":"central B cell receptor editing","synonyms":[{"name":"central B lymphocyte receptor editing","type":"exact"},{"name":"central B-cell receptor editing","type":"exact"},{"name":"central B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002511"}


id: GO:0046982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nonidentical protein to form a heterodimer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dimerization activity","termid":"GO:0046983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein heterodimerization activity","termid":"GO:0046982"}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: PBO:0015230
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(3)","termid":"PBO:0015230"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: SOFP:missing_start_codon
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"true if start of CDS is unknown","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missing_start_codon","termid":"SOFP:missing_start_codon"}


id: PBO:0070707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 12","termid":"PBO:0070707"}


id: PBO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zn(2)-C6 fungal-type DNA-binding transcription factor, truncated","termid":"PBO:0017498"}


id: GO:0005911
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that forms a connection between two or more cells of an organism; excludes direct cytoplasmic intercellular bridges, such as ring canals in insects.","definition_xrefs":["GOC:mah","GOC:dgh","PMID:28096264","PMID:21422226","GOC:aruk","GOC:bc","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anchoring junction","termid":"GO:0070161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell-cell junction","secondary_identifiers":["NIF_Subcellular:sao1922892319"],"synonyms":[{"name":"cell-cell contact region","type":"broad"},{"name":"cell-cell contact zone","type":"broad"},{"name":"intercellular junction","type":"exact"}],"termid":"GO:0005911"}


id: PBO:0038839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 9","termid":"PBO:0038839"}


id: PBO:0071210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 51","termid":"PBO:0071210"}


id: SO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of double stranded RNA where the bases do not conform to WC base pairing. The loop is closed on both sides by canonical base pairing. If the interruption to base pairing occurs on one strand only, it is known as a bulge.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_internal_loop","synonyms":[{"name":"RNA internal loop","type":"exact"}],"termid":"SO:0000020"}


id: GO:0160093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:23020903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharynx development","termid":"GO:0160093"}


id: PATO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An increased size quality inhering in a bearer by virtue of the bearer's exhibiting enlargement of a cell or constituent group of cells (for example, organ).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic","synonyms":[{"name":"hypertrophy","type":"narrow"}],"termid":"PATO:0000584"}


id: GO:1901622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smoothened signaling pathway","termid":"GO:0045880"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"positively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"activation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"activation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"positive regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"positive regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"up-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"upregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901622"}


id: PBO:0084112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heavy metal ion homeostasis protein; facilitates trafficking of Smf1p and Smf2p metal transporters to vacuole where they are degraded; acts as an adaptor protein with Rsp5p in the regulated endocytosis of Smf1p and is itself ubiquitylated by Rsp5p; controls metal ion transport, prevents metal hyperaccumulation, functions in copper detoxification","termid":"PBO:0084112"}


id: PBO:0038800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 6 (pseudogene)","termid":"PBO:0038800"}


id: PBO:0030753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcriptional_response_to_pheromone","termid":"PBO:0030753"}


id: PBO:0079727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 3 (pseudogene)","termid":"PBO:0079727"}


id: FYPO:0009008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased vegetative cell population viability","synonyms":[{"name":"increased cell population viability during vegetative growth","type":"exact"}],"termid":"FYPO:0009008"}


id: PR:Q10258
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylenetetrahydrofolate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00458","PRO:DNx","PANTHER:PTHR21091:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.10","secondary_identifiers":["UniProtKB:Q10258"],"synonyms":[{"name":"Spom972h-MTHFR","type":"exact"}],"termid":"PR:Q10258"}


id: PBO:0075362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX2 overlapping transcript","termid":"PBO:0075362"}


id: SO:0000131
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated as it is translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_regulated","synonyms":[{"name":"translationally regulated","type":"exact"}],"termid":"SO:0000131"}


id: GO:2000386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"positively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovarian follicle development","synonyms":[{"name":"positive regulation of follicular phase","type":"related"}],"termid":"GO:2000386"}


id: GO:0070316
data:
  {"annotated_genes":["SJAG_03356","SJAG_02621","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95656,114129,112049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070316","terms_by_termid":{"GO:0070317":null}}


id: PBO:0054025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1356","termid":"PBO:0054025"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: PBO:0112231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Rtf2","termid":"PBO:0112231"}


id: PBO:0070879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 11","termid":"PBO:0070879"}


id: PBO:0089408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor Mrl1","termid":"PBO:0089408"}


id: GO:0010889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"regulates","term_name":"sequestering of triglyceride","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sequestering of triglyceride","synonyms":[{"name":"regulation of sequestering of triacylglycerol","type":"exact"},{"name":"regulation of triacylglycerol sequestration","type":"exact"}],"termid":"GO:0010889"}


id: PBO:0004973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 8","termid":"PBO:0004973"}


id: FYPO:0005977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a soluble protein forms prions, by refolding and assembling into highly ordered, self-propagating detergent- and protease-resistant polymers. Phenotypes associated with prions are inherited in a non-Mendelian manner.","definition_xrefs":["PMID:24021964","PMID:28191457","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"prion formation","synonyms":[{"name":"prion formation during mitotic cell cycle","type":"related"},{"name":"prion formation during vegetative growth","type":"exact"}],"termid":"FYPO:0005977"}


id: PBO:0017684
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FUS3","termid":"PBO:0017684"}


id: PBO:0076942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFPI2 divergent transcript","termid":"PBO:0076942"}


id: PBO:0077993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2A","termid":"PBO:0077993"}


id: PBO:0080244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 7 pseudogene","termid":"PBO:0080244"}


id: GO:0033386
data:
  {"annotated_genes":["SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105560],"is_not":false,"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"geranylgeranyl diphosphate metabolic process","termid":"GO:0033385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranylgeranyl diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5121"],"synonyms":[{"name":"geranylgeranyl diphosphate anabolism","type":"exact"},{"name":"geranylgeranyl diphosphate biosynthesis","type":"exact"},{"name":"geranylgeranyl diphosphate formation","type":"exact"},{"name":"geranylgeranyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033386","terms_by_termid":{"GO:0033386":null}}


id: PBO:0082545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p","termid":"PBO:0082545"}


id: PBO:0017594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation protein Mtf2 (predicted)","termid":"PBO:0017594"}


id: PBO:0075416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 1","termid":"PBO:0075416"}


id: GO:1902085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumagillin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"fumagillin catabolic process","synonyms":[{"name":"fumagillin breakdown","type":"exact"},{"name":"fumagillin catabolism","type":"exact"},{"name":"fumagillin degradation","type":"exact"}],"termid":"GO:1902085"}


id: GO:0098002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry receptor-mediated virion attachment to host cell","termid":"GO:0098670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor-mediated bacteriophage irreversible attachment to host cell","synonyms":[{"name":"irreversible bacteriophage attachment, binding of host cell surface receptor","type":"exact"},{"name":"phage irreversible adsorption","type":"related"}],"termid":"GO:0098002"}


id: PBO:0087900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulation of cell cycle progression from G1 to S phase, forms a complex with Swi6p that binds to MluI cell cycle box regulatory element in promoters of DNA synthesis genes","termid":"PBO:0087900"}


id: PBO:0076289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsin II","termid":"PBO:0076289"}


id: MOD:01096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-benzyl-L-threonine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-benzyl-L-threonine","termid":"MOD:01096"}


id: PBO:0064535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase mitochondrial","termid":"PBO:0064535"}


id: PBO:0087238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine esterase; homolog of human neuropathy target esterase (NTE); Nte1p-mediated phosphatidylcholine turnover influences transcription factor Opi1p localization, affecting transcriptional regulation of phospholipid biosynthesis genes","termid":"PBO:0087238"}


id: PBO:0041067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRI3 binding protein pseudogene 1","termid":"PBO:0041067"}


id: PBO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 149","termid":"PBO:0075100"}


id: GO:0047173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + all-trans-retinol--[retinol-binding protein] = a 2-acyl-sn-glycero-3-phosphocholine + an all-trans-retinyl ester + apo--[retinol-binding protein]. Recognizes the substrate both in free form and when bound to cellular-retinol-binding-protein, but has higher affinity for the bound form.","definition_xrefs":["RHEA:17469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphatidylcholine-retinol O-acyltransferase activity","secondary_identifiers":["EC:2.3.1.135","MetaCyc:2.3.1.135-RXN","Reactome:R-HSA-975608"],"synonyms":[{"name":"lecithin--retinol acyltransferase activity","type":"related"},{"name":"phosphatidylcholine:retinol-(cellular-retinol-binding-protein) O-acyltransferase activity","type":"related"},{"name":"phosphatidylcholine:retinol-[cellular-retinol-binding-protein] O-acyltransferase activity","type":"related"}],"termid":"GO:0047173"}


id: PR:000045536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:18422602","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","termid":"PR:000045537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spi1/GDP+","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding nuclear protein spi1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Ran-GDP","type":"broad"},{"name":"Spi1-GDP (Schizosaccharomyces pombe)","type":"exact"},{"name":"spi1/GDP+","type":"exact"}],"termid":"PR:000045536"}


id: PBO:0051062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3/OR15-3B (non-functional)","termid":"PBO:0051062"}


id: PBO:0083269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 88% of ORF overlaps the verified gene RPL39; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083269"}


id: PBO:0065830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6D, member RAS oncogene family","termid":"PBO:0065830"}


id: GO:0030226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an apolipoprotein to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein receptor activity","termid":"GO:0030226"}


id: PR:O74951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC736.02 gene.","definition_xrefs":["UniProtKB:O74951","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.02","synonyms":[{"name":"Spom972h-SPCC736.02","type":"exact"}],"termid":"PR:O74951"}


id: PBO:0081530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 440","termid":"PBO:0081530"}


id: GO:2000289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell axon guidance.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"photoreceptor cell axon guidance","termid":"GO:0072499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell axon guidance","synonyms":[{"name":"regulation of photoreceptor cell axon pathfinding","type":"exact"}],"termid":"GO:2000289"}


id: PBO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD46 molecule pseudogene 1","termid":"PBO:0042326"}


id: PR:G2TRS4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C36.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.13","synonyms":[{"name":"Spom972h-SPBC36.13","type":"exact"}],"termid":"PR:G2TRS4"}


id: PBO:0085661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation","termid":"PBO:0085661"}


id: FYPO:0006287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0006287)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006287"}


id: PBO:0081618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 547","termid":"PBO:0081618"}


id: PBO:0065715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing 2, pseudogene","termid":"PBO:0065715"}


id: PBO:0086618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0086618"}


id: PBO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 13","termid":"PBO:0071649"}


id: PBO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrogen/potassium transport system protein (predicted)","termid":"PBO:0001587"}


id: PBO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-9","termid":"PBO:0052886"}


id: PBO:0042436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 antisense RNA 1","termid":"PBO:0042436"}


id: PBO:0072545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 75","termid":"PBO:0072545"}


id: PBO:0069109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 358, pseudogene","termid":"PBO:0069109"}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: GO:1900863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"},{"relation_name":"positively_regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"positive regulation of cordyol C biosynthetic process","synonyms":[{"name":"activation of cordyol C biosynthetic process","type":"narrow"},{"name":"up regulation of cordyol C biosynthetic process","type":"exact"},{"name":"up-regulation of cordyol C biosynthetic process","type":"exact"},{"name":"upregulation of cordyol C biosynthetic process","type":"exact"}],"termid":"GO:1900863"}


id: PBO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 4","termid":"PBO:0050380"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-dependent peptide secondary active transmembrane transporter activity (obsolete GO:0022897)","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: PBO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_monopolar_protein_localization_to_cell_tip","termid":"PBO:0034668"}


id: PBO:0068375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 168","termid":"PBO:0068375"}


id: PBO:0076863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 13A","termid":"PBO:0076863"}


id: FYPO:0000117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"abnormal septum assembly","secondary_identifiers":["FYPO:0000170"],"synonyms":[{"name":"abnormal division septum assembly","type":"exact"},{"name":"abnormal division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal septation","type":"broad"},{"name":"abnormal septum assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septum assembly during vegetative growth","type":"exact"},{"name":"septation defects","type":"broad"},{"name":"septum formation: abnormal","type":"related"}],"termid":"FYPO:0000117"}


id: FYPO:0001633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular phenylalanine level","termid":"FYPO:0001642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar phenylalanine level","synonyms":[{"name":"normal level of phenylalanine in vacuole","type":"exact"},{"name":"normal vacuolar L-phenylalanine level","type":"exact"},{"name":"normal vacuolar phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar phenylalanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001633"}


id: PBO:0113089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; localizes to the mitochondrial outer surface upon oxidative stress; negative regulator of nonselective autophagy; Stb5p directly regulates the expression of ALD6 mRNA and directly binds to the ALD6 promoter","termid":"PBO:0113089"}


id: SO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the nature of a proteinaceous polymer, where by the amino acid units are joined by peptide bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl","termid":"SO:0001407"}


id: GO:0009593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus","synonyms":[{"name":"chemoreception","type":"related"},{"name":"detection of chemical substance","type":"exact"},{"name":"chemoperception","type":"exact"},{"name":"perception of chemical stimulus","type":"related"},{"name":"perception of chemical substance","type":"related"}],"termid":"GO:0009593"}


id: GO:0038012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which internalization of a Wnt receptor stops, prevents, or reduces the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:rl","GOC:bf","PMID:19643732","GOC:BHF","PMID:17908284"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway by Wnt receptor internalization (obsolete GO:0038012)","synonyms":[{"name":"ligand-dependent internalization of Frizzled","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor endocytosis","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway by Wnt receptor internalization","type":"exact"}],"termid":"GO:0038012"}


id: PBO:0072941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 21","termid":"PBO:0072941"}


id: PBO:0060149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1 like","termid":"PBO:0060149"}


id: PATO:0001434
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's ability to produce new life or offspring.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reproductive quality","termid":"PATO:0001434"}


id: PBO:0078730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-2","termid":"PBO:0078730"}


id: GO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that functions in transcription termination of RNA polymerase II transcribed non-coding RNAs. This complex interacts with the carboxy-terminal domain (CTD) of PolII and the terminator sequences in the nascent RNA transcript. In yeast this complex consists of Nrd1p, Nab3p, and Sen1p.","definition_xrefs":["PMID:10655211","PMID:21084293","PMID:16427013","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nrd1 complex","termid":"GO:0035649"}


id: SO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A radiation hybrid map is a physical map.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RH_map","synonyms":[{"name":"RH map","type":"exact"},{"name":"radiation hybrid map","type":"exact"}],"termid":"SO:0001252"}


id: GO:0070584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a mitochondrion are generated and organized.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrion morphogenesis (obsolete GO:0070584)","termid":"GO:0070584"}


id: GO:0045522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-26 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-26 receptor binding","synonyms":[{"name":"IL-26","type":"narrow"},{"name":"interleukin-26 receptor ligand","type":"narrow"}],"termid":"GO:0045522"}


id: PBO:0059445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A18","termid":"PBO:0059445"}


id: GO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-1 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-1","termid":"GO:0071347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-1-mediated signaling pathway","synonyms":[{"name":"IL-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"IL-1 beta-mediated signaling pathway","type":"narrow"},{"name":"IL-1-mediated signaling pathway","type":"exact"},{"name":"interleukin-1 alpha-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1 beta-mediated signaling pathway","type":"narrow"},{"name":"interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:0070498"}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: PBO:0066498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFT1 homolog","termid":"PBO:0066498"}


id: GO:0042909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["Wikipedia:Acridine","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transport (obsolete GO:0042909)","termid":"GO:0042909"}


id: PBO:0111923
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0111923"}


id: PBO:0034677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034677"}


id: FYPO:0003262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA measured in a cell is greater than normal. All types of small RNA, a particular RNA type, or a specific small RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:24095277"],"gene_count":0,"genotype_count":0,"name":"obsolete increased small RNA level (obsolete FYPO:0003262)","synonyms":[{"name":"increased accumulation of small RNAs","type":"related"},{"name":"increased small RNA accumulation","type":"related"},{"name":"increased small RNA level","type":"related"},{"name":"increased small RNA level during mitotic cell cycle","type":"related"},{"name":"increased small RNA level during vegetative growth","type":"exact"},{"name":"reduced small RNA level","type":"exact"}],"termid":"FYPO:0003262"}


id: GO:0015733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which shikimate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"shikimate transmembrane transport","synonyms":[{"name":"shikimate transport","type":"related"}],"termid":"GO:0015733"}


id: GO:0043132
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of nicotinamide adenine dinucleotide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"NAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) transport","type":"exact"},{"name":"NAD (reduced) transport","type":"exact"},{"name":"NADH transport","type":"exact"},{"name":"nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"oxidized NAD transport","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"reduced NAD transport","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide transport","type":"exact"}],"termid":"GO:0043132","terms_by_termid":{"GO:1990549":null}}


id: PBO:0076341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 9","termid":"PBO:0076341"}


id: FYPO:0000781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription during vegetative growth","synonyms":[{"name":"decreased transcription during mitotic cell cycle","type":"related"},{"name":"reduced transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0000781"}


id: FYPO:0002083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal. The cell contains one nucleus and no septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:10388806","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"swollen elongated cell with enlarged nucleus","termid":"FYPO:0005440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0000631","FYPO:0002403","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus","synonyms":[{"name":"inviable elongated cell with enlarged nucleus and increased cell volume","type":"exact"},{"name":"inviable elongated vegetative cell with swollen medial region","type":"related"},{"name":"inviable enlarged elongated cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated cell with enlarged nucleus","type":"related"},{"name":"inviable swollen elongated mononucleate aseptate cell with enlarged nucleus","type":"exact"},{"name":"inviable swollen elongated vegetative cell with enlarged nucleus","type":"exact"},{"name":"lethal; swollen elongated cell with enlarged nucleus","type":"exact"}],"termid":"FYPO:0002083"}


id: MOD:01265
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:270#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site P","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01265"}


id: PATO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000532 micronutrient sensitivity value (obsolete PATO:0000532)","termid":"PATO:0000532"}


id: PBO:0080869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog B","termid":"PBO:0080869"}


id: PBO:0062226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AW member 1 pseudogene","termid":"PBO:0062226"}


id: GO:0043635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylnaphthalene, an organic compound, C10H7CH3, obtained from coal tar.","definition_xrefs":["GOC:jl","PMID:16535687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"methylnaphthalene catabolic process","synonyms":[{"name":"2-MN catabolism","type":"related"},{"name":"1-MN catabolic process","type":"related"},{"name":"1-MN catabolism","type":"related"},{"name":"1-methylnaphthalene catabolic process","type":"narrow"},{"name":"1-methylnaphthalene catabolism","type":"narrow"},{"name":"2-MN catabolic process","type":"related"},{"name":"2-methylnaphthalene catabolic process","type":"narrow"},{"name":"2-methylnaphthalene catabolism","type":"narrow"}],"termid":"GO:0043635"}


id: PBO:0055617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3056","termid":"PBO:0055617"}


id: GO:0070552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the FAM175B/ABRO1, BRCC3/BRCC36, BRE/BRCC45 and MERIT40/NBA1 proteins, and specifically cleaves K63-linked polyubiquitin chains.","definition_xrefs":["GOC:mah","PMID:19214193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRISC complex","termid":"GO:0070552"}


id: GO:0052142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis within host (obsolete GO:0052142)","termid":"GO:0052142"}


id: GO:1990607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether cytokinesis has correctly completed, is received and converted into a molecular signal, contributing to a cytokinesis after mitosis checkpoint.","definition_xrefs":["GOC:vw","PMID:1234","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cytokinesis after mitosis checkpoint (obsolete GO:1990607)","termid":"GO:1990607"}


id: PBO:0040007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 15","termid":"PBO:0040007"}


id: GO:0050060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain alcohol + 2 NAD+ + H2O = a long-chain carboxylate + 2 NADH.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALCOHOL-DEHYDROGENASE-RXN","EC:1.1.1.192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"long-chain-alcohol dehydrogenase activity","secondary_identifiers":["RHEA:17977"],"synonyms":[{"name":"fatty alcohol oxidoreductase activity","type":"related"},{"name":"long-chain alcohol dehydrogenase activity","type":"related"},{"name":"long-chain-alcohol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050060"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: PBO:0029424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation","termid":"PBO:0029424"}


id: PBO:0089616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrogen/potassium transport system protein","termid":"PBO:0089616"}


id: PBO:0073944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 2","termid":"PBO:0073944"}


id: PBO:0073049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 7","termid":"PBO:0073049"}


id: GO:1901729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monensin A.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"monensin A catabolic process","synonyms":[{"name":"monensin A breakdown","type":"exact"},{"name":"monensin A catabolism","type":"exact"},{"name":"monensin A degradation","type":"exact"},{"name":"monensin breakdown","type":"exact"},{"name":"monensin catabolism","type":"exact"},{"name":"monensin degradation","type":"exact"}],"termid":"GO:1901729"}


id: PBO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Hua1","termid":"PBO:0031875"}


id: SO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose association with a trait is based on the gene's location on a chromosome.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positional_candidate_gene","synonyms":[{"name":"positional candidate gene","type":"exact"},{"name":"positional target gene","type":"related"}],"termid":"SO:0001868"}


id: PBO:0090527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, RNA-binding Cwf5","termid":"PBO:0090527"}


id: GO:1905414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"negatively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dense core granule exocytosis","synonyms":[{"name":"down regulation of dense core granule exocytosis","type":"exact"},{"name":"down regulation of dense core vesicle exocytosis","type":"exact"},{"name":"down-regulation of dense core granule exocytosis","type":"exact"},{"name":"down-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"downregulation of dense core granule exocytosis","type":"exact"},{"name":"downregulation of dense core vesicle exocytosis","type":"exact"},{"name":"inhibition of dense core granule exocytosis","type":"narrow"},{"name":"inhibition of dense core vesicle exocytosis","type":"narrow"},{"name":"negative regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905414"}


id: PBO:0113050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; involved in the nuclear import of Hsp82p after DNA damage; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0113050"}


id: GO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a stress fiber. A stress fiber is a contractile actin filament bundle that consists of short actin filaments with alternating polarity.","definition_xrefs":["GOC:mah","PMID:16651381","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile actin filament bundle assembly","termid":"GO:0030038"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"stress fiber assembly","synonyms":[{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"},{"name":"stress fibre biosynthesis","type":"related"},{"name":"stress fibre formation","type":"related"}],"termid":"GO:0043149"}


id: PBO:0084650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minor isoform of large subunit of ribonucleotide-diphosphate reductase; the RNR complex catalyzes rate-limiting step in dNTP synthesis, regulated by DNA replication and DNA damage checkpoint pathways via localization of small subunits; RNR3 has a paralog, RNR1, that arose from the whole genome duplication","termid":"PBO:0084650"}


id: PBO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transmembrane transporter, meiotic Mfc1","termid":"PBO:0017683"}


id: GO:0010944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves direct competition for interaction with a promoter binding site.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription by competitive promoter binding","termid":"GO:0010944"}


id: GO:0044586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellotetraose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellotetraose binding","termid":"GO:0044586"}


id: FYPO:0008222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which monomethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0004220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 monomethylation during mitotic G2/M phase","termid":"FYPO:0008222"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: GO:0044200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell nuclear envelope","termid":"GO:0044199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear membrane","termid":"GO:0044200"}


id: PBO:0082252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the translation initiation factor eIF2; eIF2 is involved in identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP; protein abundance increases in response to DNA replication stress","termid":"PBO:0082252"}


id: PBO:0031911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-threonyl-carbamoyl-adenosine (t6A) Sua5 (predicted)","termid":"PBO:0031911"}


id: GO:2001045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of integrin-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of integrin-mediated signaling pathway","termid":"GO:2001044"},{"relation_name":"negatively_regulates","term_name":"integrin-mediated signaling pathway","termid":"GO:0007229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of integrin-mediated signaling pathway","synonyms":[{"name":"negative regulation of integrin-mediated signalling pathway","type":"exact"}],"termid":"GO:2001045"}


