# terms

id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:16236432","PMID:17608616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: GO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"activation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"positive regulation of RAR signaling pathway","type":"exact"},{"name":"positive regulation of retinoic acid receptor signalling pathway","type":"exact"},{"name":"stimulation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"up regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"up-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"upregulation of retinoic acid receptor signaling pathway","type":"exact"}],"termid":"GO:0048386"}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: PBO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting receptor for ubiquitinated membrane proteins, ESCRT 0 complex subunit Sst4","termid":"PBO:0001568"}


id: PBO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCAM intronic transcript 1","termid":"PBO:0045484"}


id: GO:0045866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of recombination within rDNA repeats (obsolete GO:0045866)","synonyms":[{"name":"positive regulation of recombination within rDNA repeats","type":"exact"}],"termid":"GO:0045866"}


id: PBO:0073180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 2","termid":"PBO:0073180"}


id: GO:0103028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a peptidoglycan dimer (generic) = a lipid II + GlcNAc-1,6-anhydro-MurNAc-pentapeptide.","definition_xrefs":["EC:4.2.2.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"murein hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-5190"],"termid":"GO:0103028"}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: FYPO:0007361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of an ATPase activity does not occur.","definition_xrefs":["PomBase:mah","PMID:32204793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished positive regulation of ATPase activity","synonyms":[{"name":"abolished activation of ATPase activity","type":"narrow"},{"name":"abolished positive regulation of ATPase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of ATPase activity during vegetative growth","type":"exact"},{"name":"positive regulation of ATPase activity abolished","type":"exact"}],"termid":"FYPO:0007361"}


id: GO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent binding of a pyrromethane (dipyrrin) cofactor to protein via the sulfur atom of cysteine forming dipyrrolylmethanemethyl-L-cysteine.","definition_xrefs":["RESID:AA0252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-pyrromethane cofactor linkage","secondary_identifiers":["GO:0018354","GO:0033035"],"synonyms":[{"name":"dipyrromethane cofactor binding","type":"related"},{"name":"peptidyl-pyrromethane cofactor linkage via dipyrrolylmethanemethyl-L-cysteine","type":"exact"}],"termid":"GO:0018160"}


id: PBO:0091379
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEloBox protein","termid":"PBO:0091379"}


id: PBO:0046748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 4","termid":"PBO:0046748"}


id: PBO:0089316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate cleavage peptidase Icp55","termid":"PBO:0089316"}


id: GO:0060528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell acquires specialized features of a secretory columnal luminar epithelial cell of the prostate.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development","termid":"GO:0060528"}


id: GO:1903245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:TermGenie","PMID:17242280","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903245)","synonyms":[{"name":"regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903245"}


id: PBO:0044504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 1","termid":"PBO:0044504"}


id: PBO:0075166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D2 polypeptide","termid":"PBO:0075166"}


id: FYPO:0007596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitophagy","termid":"FYPO:0000500"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitophagy during nitrogen starvation","synonyms":[{"name":"decreased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"decreased autophagy of mitochondrion during nitrogen starvation","type":"exact"},{"name":"reduced autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007596"}


id: PBO:0026828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026828"}


id: PBO:0078276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-4","termid":"PBO:0078276"}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: PBO:0059702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 10","termid":"PBO:0059702"}


id: PBO:0069535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 805, pseudogene","termid":"PBO:0069535"}


id: FYPO:0004118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that has one or more septa with normal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal septum morphology","type":"exact"}],"termid":"FYPO:0004118"}


id: PBO:0053847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1116","termid":"PBO:0053847"}


id: GO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of cytolysis of symbiont cells (obsolete GO:0051841)","synonyms":[{"name":"activation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"stimulation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"up regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"up-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"upregulation by host of cytolysis of symbiont cells","type":"exact"}],"termid":"GO:0051841"}


id: PBO:0028273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0028273"}


id: GO:0052891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (S)-hydroxynitrile = an aliphatic aldehyde or ketone + cyanide.","definition_xrefs":["PMID:15299689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aliphatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11731"],"synonyms":[{"name":"(S)-cyanohydrin carbonyl-lyase (cyanide forming) activity","type":"broad"},{"name":"(S)-cyanohydrin producing hydroxynitrile lyase activity","type":"broad"},{"name":"(S)-hydroxynitrile lyase activity","type":"broad"},{"name":"(S)-oxynitrilase activity","type":"broad"},{"name":"(S)-selective hydroxynitrile lyase activity","type":"broad"}],"termid":"GO:0052891"}


id: GO:1905620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","PMID:15364955","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of alpha-(1->3)-fucosyltransferase activity","termid":"GO:1905619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alpha-(1->3)-fucosyltransferase activity","synonyms":[{"name":"down regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"inhibition of alpha(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1->3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-1,3-fucosyltransferase activity","type":"narrow"},{"name":"negative regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905620"}


id: PBO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Cdk9","termid":"PBO:0000716"}


id: MOD:00178
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(ADP-ribosyl)-L-cysteine.","definition_xrefs":["Unimod:213#C","PubMed:15842200","PubMed:3863818","RESID:AA0169","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(ADP-ribosyl)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]sulfanyl)propanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"ADPRibCys","type":"exact"},{"name":"MOD_RES ADP-ribosylcysteine","type":"exact"},{"name":"S-(ADP-ribosyl)- (on Cysteine)","type":"exact"},{"name":"S-(ADP-ribosyl)-L-cysteine","type":"exact"},{"name":"S-L-cysteine alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"S-alpha-D-ribofuranosyl-L-cysteine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:00178"}


id: PBO:0053102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 1","termid":"PBO:0053102"}


id: PBO:0040997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 2","termid":"PBO:0040997"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: PBO:0110333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PF pseudogene 3","termid":"PBO:0110333"}


id: PBO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 8","termid":"PBO:0042982"}


id: GO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal straight tubule over time, from its formation to the mature structure. The metanephric proximal straight tubule is the part of the metanephric descending limb that extends from the metanephric proximal convoluted tubule to the metanephric descending thin tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal straight tubule development","termid":"GO:0072020"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric proximal tubule development","termid":"GO:0072237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal straight tubule development","synonyms":[{"name":"metanephric S3 development","type":"exact"}],"termid":"GO:0072230"}


id: GO:0016218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a multistep reaction that produce polyketides through decarboxylative condensation of carboxylic acids. The key chain-building reaction, a C-N bond-forming reaction, involves the generation of the characteristic peptide bond by nucleophilic attack of the amino group of an amino-acyl donor unit covalently bound to a downstream peptidyl carrier protein module (amino acyl-S-PCP) on the acyl group of an upstream electrophilic acyl- or peptidyl acyl-S-PCP chain, catalyzed by a condensation (C) domain. Supplementing these core chain-elongation domains are variable numbers of auxiliary domains that are responsible for modification of the growing polypeptide chain by a small set of iterated reactions including epimerization, N-methylation, and heterocyclization.","definition_xrefs":["PMID:10631508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"polyketide synthase activity","synonyms":[{"name":"PKS activity","type":"related"}],"termid":"GO:0016218"}


id: GO:0033659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of host cell mitochondria. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:37175745","GOC:pamgo_curators","PMID:35069483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host mitochondrion","synonyms":[{"name":"disruption by symbiont of host mitochondrion","type":"exact"},{"name":"modification by symbiont of host mitochondrion","type":"related"}],"termid":"GO:0033659"}


id: PBO:0048153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1","termid":"PBO:0048153"}


id: PBO:0066089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASA2 intronic transcript 1","termid":"PBO:0066089"}


id: GO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the central (trunk) regions of the embryo by the gap genes; exemplified in insects by the actions of the Kruppel gene product.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thorax and anterior abdomen determination","termid":"GO:0007356"}


id: FYPO:0006251
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id: GO:0090624
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id: PBO:0053075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBX1 antisense RNA 1","termid":"PBO:0053075"}


id: PBO:0088504
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap62","termid":"PBO:0088504"}


id: PBO:0030378
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: GO:2000112
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id: PBO:0045326
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id: PBO:0027904
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id: PBO:0017585
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, TPR lobe subcomplex subunit Apc8","termid":"PBO:0017585"}


id: MOD:01019
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id: PBO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1","termid":"PBO:0090088"}


id: PBO:0109195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1","termid":"PBO:0109195"}


id: GO:0140843
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id: PBO:0044483
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily C member 1","termid":"PBO:0044483"}


id: FYPO:0001321
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physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative 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id: PATO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in a bearer by virtue of the bearer's having fewer processual parts.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extra or missing processual parts","termid":"PATO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"having decreased processual parts","termid":"PATO:0001570"}


id: GO:1901854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin degradation","type":"exact"}],"termid":"GO:1901854"}


id: GO:0021667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 6 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:curators","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 6 development","termid":"GO:0021572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}


id: GO:0106042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GABA-A receptor activity","termid":"GO:0106040"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of GABA-A receptor activity","termid":"GO:0106042"}


id: GO:0030730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sequestering of triglyceride","synonyms":[{"name":"retention of triacylglycerol","type":"exact"},{"name":"retention of triglyceride","type":"exact"},{"name":"sequestering of triacylglycerol","type":"exact"},{"name":"sequestration of triacylglycerol","type":"exact"},{"name":"sequestration of triglyceride","type":"exact"},{"name":"storage of triacylglycerol","type":"exact"},{"name":"storage of triglyceride","type":"exact"},{"name":"triacylglycerol retention","type":"exact"},{"name":"triacylglycerol sequestering","type":"exact"},{"name":"triacylglycerol sequestration","type":"exact"},{"name":"triacylglycerol storage","type":"exact"},{"name":"triglyceride retention","type":"exact"},{"name":"triglyceride sequestering","type":"exact"},{"name":"triglyceride sequestration","type":"exact"},{"name":"triglyceride storage","type":"exact"}],"termid":"GO:0030730"}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: _global:has_penetrance
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and its observed penetrance in a population. Penetrance is the proportion of individuals carrying an allele that express a trait associated with the allele.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_penetrance","synonyms":[{"name":"penetrance","type":"exact"}],"termid":"_global:has_penetrance"}


id: PBO:0050341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 43","termid":"PBO:0050341"}


id: GO:1905522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell migration","termid":"GO:0071676"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"negatively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage migration","synonyms":[{"name":"down regulation of macrophage migration","type":"exact"},{"name":"down-regulation of macrophage migration","type":"exact"},{"name":"downregulation of macrophage migration","type":"exact"},{"name":"inhibition of macrophage migration","type":"narrow"}],"termid":"GO:1905522"}


id: PBO:0076334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT2 antisense RNA 1","termid":"PBO:0076334"}


id: MOD:00976
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:01072. Remap to MOD:01072.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00976 potassium salt (obsolete MOD:00976)","termid":"MOD:00976"}


id: PBO:0040920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base methyltransferase of 25S rRNA 2 homolog","termid":"PBO:0040920"}


id: PBO:0064065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 99","termid":"PBO:0064065"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: GO:0046292
data:
  {"annotated_genes":["SJAG_05256","SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91641,99577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde metabolism","type":"exact"},{"name":"methanal metabolic process","type":"exact"},{"name":"methanal metabolism","type":"exact"}],"termid":"GO:0046292","terms_by_termid":{"GO:0046294":null}}


id: PBO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_end_during_mitotic_interphase","termid":"PBO:0035873"}


id: PBO:0063350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pecanex 4","termid":"PBO:0063350"}


id: FYPO:0004233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased and begins later than normal.","definition_xrefs":["PMID:21118960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased and delayed mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004233"}


id: PBO:0082383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 3 subunit of the 20S proteasome; involved in ubiquitin-dependent catabolism; human homolog is subunit C10","termid":"PBO:0082383"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110576],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["RHEA:10792","EC:4.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:AIRCARBOXY-RXN","KEGG_REACTION:R04209","Reactome:R-HSA-73806"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: GO:0140340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to a cerebroside and delivering it either to an acceptor molecule or to a specific location.","definition_xrefs":["PMID:9132017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid transfer activity","termid":"GO:0017089"},{"relation_name":"is_a","term_name":"ceramide transfer activity","termid":"GO:0120017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"cerebroside transfer activity","synonyms":[{"name":"cerebroside carrier activity","type":"exact"}],"termid":"GO:0140340"}


id: GO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol 2-phosphate + H2O = glycerol + phosphate.","definition_xrefs":["EC:3.1.3.19","RHEA:13105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycerol-2-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R01043","MetaCyc:GLYCEROL-2-PHOSPHATASE-RXN"],"synonyms":[{"name":"2-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphatase activity","type":"related"},{"name":"beta-glycerophosphate phosphatase activity","type":"related"},{"name":"glycerol-2-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0047954"}


id: SO:0000704
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"member_of","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene"],"synonyms":[{"name":"INSDC_feature:gene","type":"exact"}],"termid":"SO:0000704"}


id: SO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A guanosine base that has been modified.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_guanosine","synonyms":[{"name":"modified guanosine","type":"exact"}],"termid":"SO:0001276"}


id: PBO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 3","termid":"PBO:0051848"}


id: PBO:0054382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1778","termid":"PBO:0054382"}


id: PBO:0074684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 64","termid":"PBO:0074684"}


id: GO:0034921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4,5-dihydroxy-4,5-dihydropyrene = 4,5-dihydroxypyrene + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4,5-dihydroxy-4,5-dihydropyrene dehydrogenase activity (obsolete GO:0034921)","termid":"GO:0034921"}


id: GO:0055124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the neural plate before the appropriate time.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete premature neural plate formation (obsolete GO:0055124)","synonyms":[{"name":"premature neural plate formation","type":"exact"}],"termid":"GO:0055124"}


id: PBO:0092009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Methionine (cau), mitochondrial","termid":"PBO:0092009"}


id: GO:0034905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-4-hydroxy-2-oxopentanate = pyruvate + chloroacetaldehyde.","definition_xrefs":["UM-BBD_reactionID:r1437"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-4-hydroxy-2-oxopentanate aldolase activity (obsolete GO:0034905)","termid":"GO:0034905"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: PBO:0084932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor; required for biogenesis of the small ribosomal subunit; component of TREX-2 complex (Sac3p-Thp1p-Sus1p-Cdc31p) involved in transcription elongation and mRNA export from the nucleus; involved in post-transcriptional tethering of active genes to the nuclear periphery and to non-nascent mRNP; similar to the human germinal center-associated nuclear protein (GANP)","termid":"PBO:0084932"}


id: PBO:0030784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0030784"}


id: GO:0035809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urine volume","synonyms":[{"name":"regulation of urinary volume","type":"exact"},{"name":"regulation of urine flow","type":"exact"}],"termid":"GO:0035809"}


id: SO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tryptophanyl tRNA (SO:000271).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan_tRNA_primary_transcript","synonyms":[{"name":"tryptophan tRNA primary transcript","type":"exact"}],"termid":"SO:0000228"}


id: GO:0010368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in plants are intracellular and probably chloroplast localized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast isoamylase complex","termid":"GO:0010368"}


id: PBO:0075940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain 3","termid":"PBO:0075940"}


id: PBO:0077039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 7","termid":"PBO:0077039"}


id: GO:0044163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that forms the internal framework of eukaryotic and prokaryotic host cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular organelle","termid":"GO:0033647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cytoskeleton","termid":"GO:0044163"}


id: PBO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tgc1","termid":"PBO:0003084"}


id: GO:0033184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone ubiquitination (obsolete GO:0033184)","termid":"GO:0033184"}


id: PBO:0057865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3176","termid":"PBO:0057865"}


id: PBO:0038918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F5 pseudogene 2","termid":"PBO:0038918"}


id: PBO:0085913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; YJL118W is a non-essential gene; deletion enhances the toxicity of heterologously expressed human alpha-synuclein","termid":"PBO:0085913"}


id: GO:0034136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 2 signaling pathway","termid":"GO:0034135"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"negative regulation of TLR2 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034136"}


id: PBO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 1","termid":"PBO:0040034"}


id: PBO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase","termid":"PBO:0060515"}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: PBO:0109043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLTP3B divergent transcript","termid":"PBO:0109043"}


id: GO:0042296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ISG15 from one protein to another via the reaction X-ISG15 + Y = Y-ISG15 + X, where both X-ISG15 and Y-ISG15 are covalent linkages.","definition_xrefs":["PMID:12826404","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0019787","GO:0140096","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"ISG15 transferase activity","secondary_identifiers":["Reactome:R-HSA-5653754"],"synonyms":[{"name":"ISG15 conjugating enzyme activity","type":"narrow"}],"termid":"GO:0042296"}


id: PBO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 3","termid":"PBO:0072728"}


id: PBO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF in feature","termid":"PBO:0000232"}


id: FYPO:0006333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of zinc ion binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased zinc ion binding","synonyms":[{"name":"decreased zinc binding","type":"exact"},{"name":"reduced zinc ion binding","type":"exact"}],"termid":"FYPO:0006333"}


id: PBO:0085702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA splicing by the spliceosome; component of a complex containing Cef1p; interacts genetically with ISY1 and BUD13; may bind RNA; has similarity to S. pombe Cwf21p","termid":"PBO:0085702"}


id: PBO:0086564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR141C is not an essential gene","termid":"PBO:0086564"}


id: PBO:0049550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 12 like","termid":"PBO:0049550"}


id: GO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response taking place in the brain or nervous system.","definition_xrefs":["GOC:jal","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ or tissue specific immune response","termid":"GO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in brain or nervous system","termid":"GO:0002383"}


id: PBO:0083438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR","termid":"PBO:0083438"}


id: PBO:0088122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex; essential for vacuolar acidification; interacts with the V-ATPase assembly factor Vma21p in the ER; involved in V0 biogenesis","termid":"PBO:0088122"}


id: CHEBI:17202
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP","termid":"CHEBI:17202"}


id: PBO:0081082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC12 divergent transcript","termid":"PBO:0081082"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["PMID:30802236","GOC:mah","PMID:17123504","PMID:24211517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: GO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catatlysis of the reaction: calcitriol + 2 H+ + O2 + 2 reduced [adrenodoxin] = 1alpha,23S,25-trihydroxycholecalciferol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["RHEA:49192","PMID:30205156","PMID:22100522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D 23-hydroxylase activity","termid":"GO:0062179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity","termid":"GO:0062181"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_02031","SJAG_00857","SJAG_04574","SJAG_02079","SJAG_04995","SJAG_03780","SJAG_01076","SJAG_03957","SJAG_04418","SJAG_04530","SJAG_04156","SJAG_00619","SJAG_02545","SJAG_00796","SJAG_04410","SJAG_03161","SJAG_00327","SJAG_01410","SJAG_03682","SJAG_01698","SJAG_02267","SJAG_01887","SJAG_00819","SJAG_02556","SJAG_01049","SJAG_00399","SJAG_05239","SJAG_02348","SJAG_00768","SJAG_00939","SJAG_01771","SJAG_02362","SJAG_02627","SJAG_02194","SJAG_02822","SJAG_03436","SJAG_01762","SJAG_02667","SJAG_04245","SJAG_00984","SJAG_01677","SJAG_01354","SJAG_04933","SJAG_03495","SJAG_01436","SJAG_00757","SJAG_04863","SJAG_03832","SJAG_03855","SJAG_03722","SJAG_03886","SJAG_00884","SJAG_02503","SJAG_00871","SJAG_04210","SJAG_03068","SJAG_01708","SJAG_05214","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84434,85184,85838,85934,86562,88067,88777,89372,91854,92289,92350,93541,95173,95174,95521,96652,97107,97603,98294,99055,99276,101036,101411,102503,103333,103755,104633,105169,106110,106306,106576,106902,107558,107631,107632,108130,108497,109467,109643,110717,111178,111351,111587,111752,111983,112329,112602,112883,113203,113642,114228,114806,114976],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[111981,99274,108605,109465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[91198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[92171,104203,107633,107608,110677,85308,91199,106447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:vw","PMID:22976174","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_00984":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003699","GO:0003698"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: PBO:0069965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1260, pseudogene","termid":"PBO:0069965"}


id: GO:0000287
data:
  {"annotated_genes":["SJAG_03743","SJAG_05010","SJAG_01404","SJAG_00074","SJAG_02369","SJAG_03811","SJAG_04882","SJAG_01209","SJAG_04487","SJAG_03180","SJAG_02107","SJAG_00461","SJAG_03096","SJAG_05200","SJAG_00231","SJAG_05209","SJAG_00706","SJAG_03985","SJAG_02763","SJAG_03626","SJAG_00669","SJAG_02370","SJAG_03723","SJAG_03276","SJAG_04842","SJAG_00381","SJAG_01648","SJAG_01955","SJAG_02206","SJAG_04970","SJAG_04362","SJAG_02247","SJAG_02897","SJAG_00402","SJAG_03562","SJAG_06022","SJAG_04449","SJAG_01731","SJAG_04579","SJAG_01351","SJAG_00353","SJAG_01945","SJAG_02796","SJAG_02734","SJAG_03813","SJAG_04233","SJAG_00853","SJAG_00502","SJAG_00044","SJAG_01254","SJAG_04972","SJAG_00134","SJAG_04747","SJAG_04964","SJAG_04865","SJAG_01875"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64549,84647,84674,84840,85021,86435,86474,87567,87657,87773,89731,90401,90534,90790,90857,92461,92885,93125,93235,93317,93373,93374,93425,93796,93819,94037,94373,94838,95089,95116,95572,95875,95941,96290,96363,97204,97205,97387,99030,99858,101536,101537,101538,101982,102259,102606,104586,105206,106001,106221,107910,108573,109334,111027,111039,111905,113851],"is_not":false,"summary":null,"term":"GO:0000287"}]},"cv_name":"molecular_function","definition":"Binding to a magnesium (Mg) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00074":null,"SJAG_00134":null,"SJAG_00231":null,"SJAG_00353":null,"SJAG_00381":null,"SJAG_00402":null,"SJAG_00461":null,"SJAG_00502":null,"SJAG_00669":null,"SJAG_00706":null,"SJAG_00853":null,"SJAG_01209":null,"SJAG_01254":null,"SJAG_01351":null,"SJAG_01404":null,"SJAG_01648":null,"SJAG_01731":null,"SJAG_01875":null,"SJAG_01945":null,"SJAG_01955":null,"SJAG_02107":null,"SJAG_02206":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02370":null,"SJAG_02734":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_02897":null,"SJAG_03096":null,"SJAG_03180":null,"SJAG_03276":null,"SJAG_03562":null,"SJAG_03626":null,"SJAG_03723":null,"SJAG_03743":null,"SJAG_03811":null,"SJAG_03813":null,"SJAG_03985":null,"SJAG_04233":null,"SJAG_04362":null,"SJAG_04449":null,"SJAG_04487":null,"SJAG_04579":null,"SJAG_04747":null,"SJAG_04842":null,"SJAG_04865":null,"SJAG_04882":null,"SJAG_04964":null,"SJAG_04970":null,"SJAG_04972":null,"SJAG_05010":null,"SJAG_05200":null,"SJAG_05209":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"magnesium ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mg binding","type":"exact"},{"name":"magnesium binding","type":"exact"}],"termid":"GO:0000287","terms_by_termid":{"GO:0000287":null}}


id: PBO:0087878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genes","termid":"PBO:0087878"}


id: PBO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK (predicted)","termid":"PBO:0005847"}


id: PBO:0005453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit (predicted)","termid":"PBO:0005453"}


id: PBO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 18 Y-linked","termid":"PBO:0061828"}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: PBO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin pseudogene 1","termid":"PBO:0060634"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: PBO:0079038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (AAC) 7-1","termid":"PBO:0079038"}


id: FYPO:0002107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable stubby vegetative cell","synonyms":[{"name":"inviable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped vegetative cell","type":"exact"},{"name":"lethal; stubby vegetative cell","type":"exact"},{"name":"stubby inviable cell during vegetative growth","type":"exact"},{"name":"stubby inviable vegetative cell","type":"exact"}],"termid":"FYPO:0002107"}


id: PR:O74739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12143:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.14","secondary_identifiers":["UniProtKB:O74739"],"synonyms":[{"name":"PNGase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1709.14","type":"related"},{"name":"Spom972h-NGLY1","type":"exact"},{"name":"peptide:N-glycanase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74739"}


id: PBO:0066574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group D antigen","termid":"PBO:0066574"}


id: PBO:0081383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 223","termid":"PBO:0081383"}


id: PBO:0081942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF706 neighboring transcript 1","termid":"PBO:0081942"}


id: PBO:0074148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member D1","termid":"PBO:0074148"}


id: GO:0015093
data:
  {"annotated_genes":["SJAG_04675","SJAG_02473","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96587,99899],"is_not":false,"summary":null,"term":"GO:0015093"},{"annotations":[88549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061840"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ferrous iron (Fe(II) or Fe2+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_04675":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ferrous iron transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:28486","MetaCyc:TRANS-RXN-8","GO:0015639","Reactome:R-HSA-5655760","Reactome:R-HSA-442368","Reactome:R-HSA-1362417"],"synonyms":[{"name":"ferrous iron uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015093","terms_by_termid":{"GO:0015093":null,"GO:0061840":null}}


id: GO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threo-isocitrate = D-erythro-isocitrate.","definition_xrefs":["EC:5.1.2.6","RHEA:10820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"isocitrate epimerase activity","secondary_identifiers":["MetaCyc:ISOCITRATE-EPIMERASE-RXN","KEGG_REACTION:R02318"],"synonyms":[{"name":"(1R,2S)-1-hydroxypropane-1,2,3-tricarboxylate 1-epimerase activity","type":"related"}],"termid":"GO:0047755"}


id: GO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sterol(in) = ADP + phosphate + sterol(out).","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled lipid transmembrane transporter activity","termid":"GO:0034040"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type sterol transporter activity","synonyms":[{"name":"ATP-coupled sterol transmembrane transporter activity","type":"related"},{"name":"ATP-dependent sterol transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled sterol transmembrane transporter activity","type":"related"},{"name":"sterol-transporting ATPase activity","type":"related"}],"termid":"GO:0034041"}


id: PBO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_vacuole","termid":"PBO:0034690"}


id: PBO:0074173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 4","termid":"PBO:0074173"}


id: PBO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B2","termid":"PBO:0043783"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:20920515","ISBN:0815340729","GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity in another organism","termid":"GO:0035918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of low voltage-gated calcium channel activity in another organism","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: GO:1990017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a tanycyte that lies within the ependyma and contains the nucleus. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao401910342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic portion of tanycyte","synonyms":[{"name":"somatic portion","type":"broad"}],"termid":"GO:1990017"}


id: PBO:0043813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 4","termid":"PBO:0043813"}


id: GO:1900540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"fumonisin catabolic process","synonyms":[{"name":"fumonisin breakdown","type":"exact"},{"name":"fumonisin catabolism","type":"exact"},{"name":"fumonisin degradation","type":"related"}],"termid":"GO:1900540"}


id: PBO:0026853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026853"}


id: PBO:0042148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 7","termid":"PBO:0042148"}


id: GO:0120048
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91297],"is_not":false,"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine in U6 snRNA + S-adenosyl-L-methionine = H+ + N(6)-methyladenosine in U6 snRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:28525753","PMID:32266935","RHEA:52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"U6 snRNA (adenine-(43)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.346","MetaCyc:RXN-18779"],"termid":"GO:0120048","terms_by_termid":{"GO:0120048":null}}


id: FYPO:0003103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased mRNA-derived small RNA level","synonyms":[{"name":"decreased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"decreased mRNA-derived small RNA accumulation","type":"related"},{"name":"decreased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"decreased mRNA-derived small transcript level","type":"exact"},{"name":"decreased protein-coding gene-derived small RNA level","type":"related"},{"name":"reduced mRNA-derived small RNA level","type":"exact"}],"termid":"FYPO:0003103"}


id: GO:0042167
data:
  {"annotated_genes":["SJAG_00366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102675],"is_not":false,"summary":null,"term":"GO:0042167"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"},{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"is_a","term_name":"pigment catabolic process","termid":"GO:0046149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00366":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"haem catabolic process","type":"exact"},{"name":"haem catabolism","type":"exact"},{"name":"heme breakdown","type":"exact"},{"name":"heme catabolism","type":"exact"},{"name":"heme degradation","type":"exact"}],"termid":"GO:0042167","terms_by_termid":{"GO:0042167":null}}


id: GO:0045690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antipodal cell differentiation.","definition_xrefs":["GOC:mtg_plant","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of antipodal cell differentiation","termid":"GO:0045688"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"antipodal cell differentiation","termid":"GO:0009557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antipodal cell differentiation","synonyms":[{"name":"activation of antipodal cell differentiation","type":"narrow"},{"name":"stimulation of antipodal cell differentiation","type":"narrow"},{"name":"up regulation of antipodal cell differentiation","type":"exact"},{"name":"up-regulation of antipodal cell differentiation","type":"exact"},{"name":"upregulation of antipodal cell differentiation","type":"exact"}],"termid":"GO:0045690"}


id: FYPO:0005350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear chromatin organization is abnormal, such that chromatin is distributed in a ring-shaped structure around the nuclear periphery rather than throughout the nucleus.","definition_xrefs":["PomBase:mah","PMID:16453724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin organization resulting in peripheral chromatin distribution","synonyms":[{"name":"abnormal chromatin organisation resulting in peripheral chromatin distribution","type":"exact"},{"name":"abnormal chromatin organization resulting in peripheral chromatin distribution during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin organization resulting in peripheral chromatin distribution during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization resulting in ring-shaped chromatin distribution","type":"exact"},{"name":"abnormal nuclear chromatin organization resulting in peripheral chromatin distribution","type":"exact"},{"name":"chromatin abnormally dispersed around nuclear periphery","type":"related"}],"termid":"FYPO:0005350"}


id: PBO:0082475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; promotes vegetative growth in response to nutrients via the Ras-cAMP signaling pathway; partially redundant with Tpk1p and Tpk3p; localizes to P-bodies during stationary phase; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082475"}


id: PBO:0028141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sulfide_absent_from_cell","termid":"PBO:0028141"}


id: PBO:0005394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,3,4,5,6-pentakisphosphate (IP5) kinase","termid":"PBO:0005394"}


id: PR:Q10089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.10","synonyms":[{"name":"Spom972h-SPAC11D3.10","type":"exact"}],"termid":"PR:Q10089"}


id: _global:has_integral_part
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X has_integral_part Y if and only if: X has_part Y and Y part_of X.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"_global:has_part"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_integral_part","termid":"_global:has_integral_part"}


id: PBO:0076022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17b","termid":"PBO:0076022"}


id: GO:0000128
data:
  {"annotated_genes":["SJAG_03802","SJAG_02380","SJAG_04191","SJAG_00926","SJAG_04720","SJAG_01975","SJAG_00910","SJAG_00239","SJAG_01253","SJAG_03484","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88593,88594,96905,96906,98814,112024,112025],"is_not":false,"summary":null,"term":"GO:0000128"},{"annotations":[99654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[102327,99655],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[101970,104835,110156,112213,104712,107449],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The reversible, non-sexual aggregation of single-celled organisms in suspension to form aggregates of many cells known as flocs.","definition_xrefs":["GOC:vw","GOC:jl","PMID:11472912","PMID:8740415","PMID:21114594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0036281","GO:0000501","GO:0043689","GO:0036282","GO:0043690","GO:0032128","Wikipedia:Flocculation"],"synonyms":[{"name":"cell-cell adhesion involved in flocculation","type":"exact"},{"name":"cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction","type":"narrow"},{"name":"co-flocculation","type":"narrow"},{"name":"coflocculation","type":"narrow"},{"name":"coflocculation via lectin-mannose interaction","type":"narrow"},{"name":"coflocculation via protein-carbohydrate interaction","type":"narrow"},{"name":"flocculation via cell wall protein-carbohydrate interaction","type":"related"},{"name":"flocculation via extracellular polymer","type":"related"}],"termid":"GO:0000128","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: GO:1990037
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The center portion of a Lewy body. In Parkinson's disease, it contains a matted meshwork of filaments.","definition_xrefs":["NIF_Subcellular:sao6587439252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body core","termid":"GO:1990037"}


id: PBO:0002974
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K(m)=63 microM","termid":"PBO:0002974"}


id: GO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to electrical stimulus","termid":"GO:0051602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus","termid":"GO:0050981"}


id: GO:0047281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrophosphate + a 2,4-dioxotetrahydropyrimidine D-ribonucleotide = PRPP + a 2,4-dioxotetrahydropyrimidine.","definition_xrefs":["MetaCyc:2.4.2.20-RXN","EC:2.4.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"dioxotetrahydropyrimidine phosphoribosyltransferase activity","secondary_identifiers":["RHEA:10232"],"synonyms":[{"name":"2,4-dioxotetrahydropyrimidine-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine phosphoribosyl transferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine ribonucleotide pyrophosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide diphosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide pyrophosphorylase activity","type":"related"}],"termid":"GO:0047281"}


id: SO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of an experimentally derived feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental_feature_attribute","synonyms":[{"name":"experimental feature attribute","type":"related"}],"termid":"SO:0001684"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: PBO:0044919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome critical region gene 5","termid":"PBO:0044919"}


id: PBO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue1/4 family involved in ER associated protein catabolism (predicted)","termid":"PBO:0005137"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: PBO:0072943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 22","termid":"PBO:0072943"}


id: PBO:0081973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRSR2 pseudogene 1","termid":"PBO:0081973"}


id: PR:P32834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic proteinase sxa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.01","synonyms":[{"name":"Spom972h-sxa1","type":"exact"}],"termid":"PR:P32834"}


id: PBO:0060201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 21, cell surface associated","termid":"PBO:0060201"}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PomBase:MLR","PMID:24790093","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: PBO:0045806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early endosome antigen 1","termid":"PBO:0045806"}


id: PBO:0040948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 19","termid":"PBO:0040948"}


id: GO:1903235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["GOC:TermGenie","PMID:16782817","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"positively_regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"activation of calcium ion-dependent exocytosis of neurotransmitter","type":"narrow"},{"name":"up regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"up-regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"upregulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"}],"termid":"GO:1903235"}


id: PR:O94401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicular integral-membrane protein VIP36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type lectin-like domain-containing protein C126.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.08c","secondary_identifiers":["UniProtKB:O94401"],"synonyms":[{"name":"Spom972h-LMAN2","type":"exact"}],"termid":"PR:O94401"}


id: PBO:0049547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 10","termid":"PBO:0049547"}


id: GO:0031607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits forming the inner ring of the core complex of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex, beta-subunit complex","termid":"GO:0019774"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome core complex","termid":"GO:0031601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear proteasome core complex, beta-subunit complex","termid":"GO:0031607"}


id: PR:O60077
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat-containing zfs1 target protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.03","synonyms":[{"name":"Spom972h-arz1","type":"exact"}],"termid":"PR:O60077"}


id: PBO:0073309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 5","termid":"PBO:0073309"}


id: PBO:0080090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 51","termid":"PBO:0080090"}


id: PR:Q09715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tup11 gene.","definition_xrefs":["UniProtKB:Q09715","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor tup11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.10","synonyms":[{"name":"Spom972h-tup11","type":"exact"}],"termid":"PR:Q09715"}


id: GO:0009229
data:
  {"annotated_genes":["SJAG_02421","SJAG_03362","SJAG_00381","SJAG_02420","SJAG_04866","SJAG_04282"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90398,95618,109664,109670,110083,112088],"is_not":false,"summary":null,"term":"GO:0009229"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thiamine diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TPP biosynthesis","type":"exact"},{"name":"TPP biosynthetic process","type":"exact"},{"name":"thiamin diphosphate biosynthetic process","type":"exact"},{"name":"thiamin pyrophosphate biosynthesis","type":"exact"},{"name":"thiamin pyrophosphate biosynthetic process","type":"exact"},{"name":"thiamine diphosphate anabolism","type":"exact"},{"name":"thiamine diphosphate biosynthesis","type":"exact"},{"name":"thiamine diphosphate formation","type":"exact"},{"name":"thiamine diphosphate synthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthesis","type":"exact"},{"name":"thiamine pyrophosphate biosynthetic process","type":"exact"}],"termid":"GO:0009229","terms_by_termid":{"GO:0009229":null}}


id: GO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"purinergic nucleotide receptor activity","secondary_identifiers":["GO:0035586"],"synonyms":[{"name":"P2 receptor","type":"related"},{"name":"purinergic receptor activity","type":"related"},{"name":"purinoceptor","type":"exact"},{"name":"purinoreceptor","type":"exact"}],"termid":"GO:0001614"}


id: PBO:0040246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4A cysteine peptidase pseudogene 1","termid":"PBO:0040246"}


id: GO:0043942
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of cellular spores derived from the products of meiosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"negatively_regulates","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043942","terms_by_termid":{"GO:0075297":null}}


id: PBO:0049656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 10, pseudogene","termid":"PBO:0049656"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: PBO:0059386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S22 pseudogene 1","termid":"PBO:0059386"}


id: FYPO:0004859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polysaccharide level during vegetative growth","termid":"FYPO:0001083"},{"relation_name":"is_a","term_name":"altered level of substance in cell wall during vegetative growth","termid":"FYPO:0002627"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002946"],"is_obsolete":false,"name":"increased cell wall polysaccharide level","synonyms":[{"name":"increased cell wall polysaccharide accumulation","type":"related"},{"name":"increased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"increased cell wall polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0004859"}


id: PBO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain containing 3","termid":"PBO:0045977"}


id: PBO:0016586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin/hydroxyisourate hydrolase (predicted)","termid":"PBO:0016586"}


id: GO:0034750
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the Scribble protein (a cell polarity determinant), the tumor suppressor protein adenomatous polyposis coli (APC), and beta-catenin; may be involved in the control of cell proliferation.","definition_xrefs":["PMID:16611247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Scrib-APC-beta-catenin complex","synonyms":[{"name":"hScrib-APC-beta-catenin complex","type":"narrow"}],"termid":"GO:0034750"}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: GO:0120199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer segment of a vertebrate cone photoreceptor that contains membrane discs that are contiguous with the ciliary membrane and containing opsin photoreceptor proteins.","definition_xrefs":["PMID:19501669","GOC:pde","PMID:26574505","PMID:6771304","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cone photoreceptor outer segment","termid":"GO:0120199"}


id: PBO:0029005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-telophase_nuclear_clustering","termid":"PBO:0029005"}


id: GO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome in which the prosthetic group is a tetrapyrrolic chelate of iron in which the degree of conjugation of double bonds is less than in porphyrin. This definition would appear to include siroheme proteins (e.g. nitrite and sulfite reductases), but these are not cytochromes.","definition_xrefs":["GOC:kd","PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome d (obsolete GO:0009462)","synonyms":[{"name":"cytochrome d","type":"exact"}],"termid":"GO:0009462"}


id: PBO:0077458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 184A","termid":"PBO:0077458"}


id: PBO:0041179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A1","termid":"PBO:0041179"}


id: PBO:0087809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation","termid":"PBO:0087809"}


id: GO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:pr","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic behavior","termid":"GO:0007622"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian behavior","synonyms":[{"name":"circadian rhythm behavior","type":"exact"}],"termid":"GO:0048512"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: GO:0000301
data:
  {"annotated_genes":["SJAG_00578","SJAG_01071","SJAG_00041","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85097,87253,105577,112904],"is_not":false,"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The retrograde movement of substances within the Golgi, mediated by COP I vesicles. Cis-Golgi vesicles are constantly moving forward through the Golgi stack by cisternal progression, eventually becoming trans-Golgi vesicles. They then selectively transport membrane and luminal proteins from the trans- to the medial-Golgi while leaving others behind in the trans-Golgi cisternae; similarly, they selectively move proteins from the medial- to the cis-Golgi.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"retrograde transport, vesicle recycling within Golgi","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"retrograde (vesicle recycling within Golgi) transport","type":"exact"}],"termid":"GO:0000301","terms_by_termid":{"GO:0000301":null}}


id: PBO:0064741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 77","termid":"PBO:0064741"}


id: GO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that reduces the rate of diuresis. Diuresis is the process of renal water excretion.","definition_xrefs":["GOC:mtg_cardio"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of diuresis (obsolete GO:0003077)","synonyms":[{"name":"negative regulation of diuresis","type":"exact"}],"termid":"GO:0003077"}


id: PBO:0059165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein MPV17","termid":"PBO:0059165"}


id: PBO:0059211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 3","termid":"PBO:0059211"}


id: PBO:0074576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 32","termid":"PBO:0074576"}


id: PBO:0077442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176B","termid":"PBO:0077442"}


id: PBO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C5 gamma","termid":"PBO:0045212"}


id: PBO:0066821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 120","termid":"PBO:0066821"}


id: GO:1903857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinin dehydrogenase activity.","definition_xrefs":["GOC:TermGenie","PMID:25535363","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of cytokinin dehydrogenase activity","termid":"GO:1903856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinin dehydrogenase activity","synonyms":[{"name":"down regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down regulation of cytokinin oxidase activity","type":"related"},{"name":"down-regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"down-regulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"down-regulation of cytokinin oxidase activity","type":"related"},{"name":"downregulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"downregulation of cytokinin dehydrogenase activity","type":"exact"},{"name":"downregulation of cytokinin oxidase activity","type":"related"},{"name":"inhibition of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"narrow"},{"name":"inhibition of cytokinin dehydrogenase activity","type":"narrow"},{"name":"inhibition of cytokinin oxidase activity","type":"related"},{"name":"negative regulation of 6-N-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of N6-dimethylallyladenine:acceptor oxidoreductase activity","type":"exact"},{"name":"negative regulation of cytokinin oxidase activity","type":"related"}],"termid":"GO:1903857"}


id: PBO:0067745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 44","termid":"PBO:0067745"}


id: FYPO:0000860
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115591,115589],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115590,115592],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[115343,115351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115342,115346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115575],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115152],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115577],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115653,115654,115655],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"},{"annotations":[115576],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal. 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id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: PBO:0043659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q4","termid":"PBO:0043659"}


id: PBO:0079461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 1","termid":"PBO:0079461"}


id: PBO:0081032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12A","termid":"PBO:0081032"}


id: PBO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 2","termid":"PBO:0043507"}


id: PBO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase regulatory subunit gamma","termid":"PBO:0051509"}


id: GO:0046080
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dUTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUTP metabolism","type":"exact"}],"termid":"GO:0046080","terms_by_termid":{"GO:0046081":null}}


id: GO:1903704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:19701182","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of siRNA processing","termid":"GO:0070921"},{"relation_name":"negatively_regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of siRNA processing","synonyms":[{"name":"down regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"down regulation of RNA interference, production of siRNA","type":"exact"},{"name":"down regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"down regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"down-regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"down-regulation of RNA interference, production of siRNA","type":"exact"},{"name":"down-regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"down-regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"downregulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"downregulation of RNA interference, production of siRNA","type":"exact"},{"name":"downregulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"downregulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"inhibition of RNA interference, production of guide RNAs","type":"narrow"},{"name":"inhibition of RNA interference, production of siRNA","type":"narrow"},{"name":"inhibition of production of guide RNAs involved in RNA interference","type":"narrow"},{"name":"inhibition of production of siRNA involved in RNA interference","type":"narrow"},{"name":"negative regulation of RNA interference, production of guide RNAs","type":"exact"},{"name":"negative regulation of RNA interference, production of siRNA","type":"exact"},{"name":"negative regulation of production of guide RNAs involved in RNA interference","type":"exact"},{"name":"negative regulation of production of siRNA involved in PTGS","type":"exact"},{"name":"negative regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"negative regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"negative regulation of siRNA production","type":"related"}],"termid":"GO:1903704"}


id: PBO:0048194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 antisense RNA 1","termid":"PBO:0048194"}


id: PBO:0043244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 4","termid":"PBO:0043244"}


id: PBO:0070924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 32","termid":"PBO:0070924"}


id: PBO:0053078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lebercilin LCA5","termid":"PBO:0053078"}


id: PBO:0026804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026804"}


id: PBO:0076034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32B","termid":"PBO:0076034"}


id: PBO:0074885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63","termid":"PBO:0074885"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: PBO:0038727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 22","termid":"PBO:0038727"}


id: PBO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF866 domain protein","termid":"PBO:0004285"}


id: GO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of any of the extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.","definition_xrefs":["GOC:dph","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear body organization","synonyms":[{"name":"nuclear body organisation","type":"exact"},{"name":"nuclear body organization and biogenesis","type":"related"}],"termid":"GO:0030575"}


id: GO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds, acting as an aminopeptidase (notably, cleaving Arg-Xaa bonds) as well as an endopeptidase.","definition_xrefs":["EC:3.4.22.16"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin H activity (obsolete GO:0004215)","synonyms":[{"name":"N-benzoylarginine-beta-naphthylamide hydrolase activity","type":"related"},{"name":"aleurain activity","type":"related"},{"name":"benzoylarginine-naphthylamide (BANA) hydrolase activity","type":"related"},{"name":"cathepsin B3 activity","type":"related"},{"name":"cathepsin BA activity","type":"related"},{"name":"cathepsin Ba","type":"related"},{"name":"cathepsin H activity","type":"exact"}],"termid":"GO:0004215"}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: PBO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2451","termid":"PBO:0055036"}


id: FYPO:0003505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione gamma-glutamylcysteinyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione gamma-glutamylcysteinyltransferase activity","termid":"FYPO:0000754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutathione gamma-glutamylcysteinyltransferase activity","synonyms":[{"name":"glutathione gamma-glutamylcysteinyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0003505"}


id: GO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity.","definition_xrefs":["PMID:2970671","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0098631","GO:0005515"],"is_obsolete":false,"name":"laminin receptor activity","termid":"GO:0005055"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: PR:Q9US02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC664.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US02"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.12c","synonyms":[{"name":"SDH assembly factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC664.12c","type":"exact"}],"termid":"PR:Q9US02"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: PBO:0043644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5 pseudogene 1","termid":"PBO:0043644"}


id: GO:0052723
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111123],"is_not":false,"summary":null,"term":"GO:0052723"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 1-diphospho-1D-myo-inositol (2,3,4,5,6)pentakisphosphate.","definition_xrefs":["PMID:18981179","RHEA:37459","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 1-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10972","EC:2.7.4.21","KEGG_REACTION:R05799"],"termid":"GO:0052723","terms_by_termid":{"GO:0052723":null}}


id: PBO:0059175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRAP antisense RNA 1","termid":"PBO:0059175"}


id: PBO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITFG1 antisense RNA 1","termid":"PBO:0051887"}


id: FYPO:0006671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal sporulation resulting in formation of ascus with more than four spores","termid":"FYPO:0003263"},{"relation_name":"is_a","term_name":"abnormal cell fusion during mating","termid":"FYPO:0000412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"transient cell fusion during mating","synonyms":[{"name":"transient cell fusion during conjugation","type":"exact"},{"name":"transient cytogamy during conjugation","type":"exact"},{"name":"transient cytogamy during mating","type":"exact"}],"termid":"FYPO:0006671"}


id: PBO:0064952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 4","termid":"PBO:0064952"}


id: GO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the acrosome membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"is_a","term_name":"lysosomal lumen","termid":"GO:0043202"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"acrosomal lumen","termid":"GO:0043160"}


id: PBO:0063459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFA divergent transcript","termid":"PBO:0063459"}


id: PBO:0028981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_vegetative_growth","termid":"PBO:0028981"}


id: GO:0061499
data:
  {"annotated_genes":["SJAG_01464","SJAG_01215","SJAG_01188","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103174,104925,111528,113004],"is_not":false,"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer plaque of spindle pole body","termid":"GO:0005824"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"outer plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061499","terms_by_termid":{"GO:0061499":null}}


id: MOD:02004
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-threonine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O3-acylated L-threonine","termid":"MOD:02004"}


id: PBO:0085653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial fission and peroxisome abundance; may have a distinct role in tethering protein aggregates to mitochondria in order to retain them in the mother cell; required for localization of Dnm1p and Mdv1p during mitochondrial division; mediates ethanol-induced apoptosis and ethanol-induced mitochondrial fragmentation","termid":"PBO:0085653"}


id: PBO:0067729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 27","termid":"PBO:0067729"}


id: PBO:0029747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_calcium_export","termid":"PBO:0029747"}


id: PBO:0048802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 2","termid":"PBO:0048802"}


id: PATO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive","synonyms":[{"name":"resinous","type":"related"}],"termid":"PATO:0002331"}


id: PBO:0030861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_medial_cortex","termid":"PBO:0030861"}


id: GO:0051599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["Wikipedia:Hydrostatic_pressure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydrostatic pressure","synonyms":[{"name":"response to biomechanical stress","type":"broad"},{"name":"response to static fluid pressure","type":"exact"}],"termid":"GO:0051599"}


id: PBO:0112562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-demethoxyubiquinol 3-hydroxylase Coq7","termid":"PBO:0112562"}


id: PBO:0067400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 507, pseudogene","termid":"PBO:0067400"}


id: PBO:0112691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex, GTPase regulator subunit Vtc1","termid":"PBO:0112691"}


id: PBO:0058692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6820","termid":"PBO:0058692"}


id: GO:0046049
data:
  {"annotated_genes":["SJAG_00533","SJAG_04354","SJAG_04713","SJAG_04709","SJAG_03708","SJAG_00197","SJAG_00694","SJAG_03164","SJAG_00444","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85577,94600,112790,107990,89515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[83605,89063,110981,88071,84592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UMP, uridine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UMP metabolism","type":"exact"}],"termid":"GO:0046049","terms_by_termid":{"GO:0044205":null,"GO:0044206":null}}


id: PBO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint protein Drc1","termid":"PBO:0001547"}


id: PBO:0047890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(6)(q13)","termid":"PBO:0047890"}


id: GO:0090217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090217)","termid":"GO:0090217"}


id: GO:1905344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prostaglandin.","definition_xrefs":["GO_REF:0000068","PMID:25290914","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid catabolic process","termid":"GO:0062232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostaglandin catabolic process","synonyms":[{"name":"prostaglandin breakdown","type":"exact"},{"name":"prostaglandin catabolism","type":"exact"},{"name":"prostaglandin degradation","type":"exact"}],"termid":"GO:1905344"}


id: GO:1990791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a dorsal root ganglion over time, from its formation to the mature structure.","definition_xrefs":["PMID:18583150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal root ganglion development","synonyms":[{"name":"DRG development","type":"exact"}],"termid":"GO:1990791"}


id: PBO:0054481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1881","termid":"PBO:0054481"}


id: PBO:0068454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 30, pseudogene","termid":"PBO:0068454"}


id: GO:0042815
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_00244","SJAG_01017","SJAG_00514","SJAG_02169","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84032,90123],"is_not":false,"summary":null,"term":"GO:0042815"},{"annotations":[85991,91949,90683],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[86841],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[111114],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size along one axis through simultaneous polarized growth from opposite ends of a cell, resulting in morphogenesis of the cell.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"bipolar cell elongation","type":"narrow"},{"name":"bipolar growth","type":"broad"},{"name":"polar cell elongation","type":"related"}],"termid":"GO:0042815","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0054070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1418","termid":"PBO:0054070"}


id: FYPO:0002818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers","synonyms":[{"name":"decreased level of MT bundles","type":"exact"},{"name":"decreased microtubule bundling","type":"related"},{"name":"microtubule arrays present in decreased numbers","type":"related"},{"name":"microtubule bundles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002818"}


id: GO:0099640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"},{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"axo-dendritic protein transport","synonyms":[{"name":"axonal protein transport","type":"narrow"}],"termid":"GO:0099640"}


id: GO:1902275
data:
  {"annotated_genes":["SJAG_02622","SJAG_02723","SJAG_02342","SJAG_01867","SJAG_02592","SJAG_03624","SJAG_01599","SJAG_02381","SJAG_04369","SJAG_00142","SJAG_01511","SJAG_02990","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[104569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[95060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[87289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[106420,87290,90479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[86926,94670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[96399,93297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[113800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[93298,114156,87965,96400,113801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw","GOC:bf","PMID:18314879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001672","GO:1903308"],"synonyms":[{"name":"regulation of chromatin assembly or disassembly","type":"related"},{"name":"regulation of chromatin assembly/disassembly","type":"related"},{"name":"regulation of chromatin modification","type":"related"},{"name":"regulation of chromatin organisation","type":"exact"},{"name":"regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1902275","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:1902801":null}}


id: FYPO:0000182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall organization is abnormal. Cell wall organization results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GO:0031505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0004805","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall organization during vegetative growth","synonyms":[{"name":"abnormal cell wall organisation during vegetative growth","type":"exact"},{"name":"abnormal cell wall organization during mitotic cell cycle","type":"related"},{"name":"abnormal fungal-type cell wall organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000182"}


id: PBO:0071804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reprimo like","termid":"PBO:0071804"}


id: GO:0061740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting of a protein to the lysosome process in which an input protein binds to a chaperone and subsequently to a lysosomal receptor.","definition_xrefs":["GOC:PARL","PMID:22748206","GOC:dph","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting to lysosome","termid":"GO:0006622"},{"relation_name":"is_a","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0006810","GO:0008150","GO:0006605","GO:0030163","GO:0044248","GO:0051179"],"is_obsolete":false,"name":"protein targeting to lysosome involved in chaperone-mediated autophagy","termid":"GO:0061740"}


id: PBO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMPD4 antisense RNA 1","termid":"PBO:0048018"}


id: GO:0102191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) = 5alpha-cholesta-7,24-dien-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["RHEA:59016","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4alpha-carboxy-5alpha-cholesta-7,24-dien-3beta-ol dehydrogenase/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11959"],"termid":"GO:0102191"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: GO:0042274
data:
  {"annotated_genes":["SJAG_04582","SJAG_01115","SJAG_04687","SJAG_03654","SJAG_02553","SJAG_02662","SJAG_03341","SJAG_03539","SJAG_03156","SJAG_04029","SJAG_03954","SJAG_00889","SJAG_01201","SJAG_04916","SJAG_04900","SJAG_00965","SJAG_04908","SJAG_04562","SJAG_02547","SJAG_03952","SJAG_02094","SJAG_02250","SJAG_04746","SJAG_02340","SJAG_03410","SJAG_00523","SJAG_03846","SJAG_02644","SJAG_00945","SJAG_04998","SJAG_03424","SJAG_04033","SJAG_00344","SJAG_02184","SJAG_02681","SJAG_01764","SJAG_02020","SJAG_04339","SJAG_02821","SJAG_06613","SJAG_02499","SJAG_01347","SJAG_01907","SJAG_01548","SJAG_02300","SJAG_03252","SJAG_04174","SJAG_03262","SJAG_01752","SJAG_03028","SJAG_01338","SJAG_02911","SJAG_05018","SJAG_03422","SJAG_00955","SJAG_01604","SJAG_01623","SJAG_02046","SJAG_04424","SJAG_02702","SJAG_05187","SJAG_03234","SJAG_00897","SJAG_03583","SJAG_04069","SJAG_03857","SJAG_01609","SJAG_01618","SJAG_00294","SJAG_03077","SJAG_02358","SJAG_02335","SJAG_01420","SJAG_03425","SJAG_03617","SJAG_02025","SJAG_02477","SJAG_01877","SJAG_01169","SJAG_02749","SJAG_00572","SJAG_04342","SJAG_01250","SJAG_02608","SJAG_03798","SJAG_02803","SJAG_03796","SJAG_02479","SJAG_00879","SJAG_03905","SJAG_00544","SJAG_04524","SJAG_01551","SJAG_02372","SJAG_02475","SJAG_00772","SJAG_04472","SJAG_03755","SJAG_01323","SJAG_01272","SJAG_00986","SJAG_03569","SJAG_04979","SJAG_00513","SJAG_01296","SJAG_04224","SJAG_00562"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87475,87618,87788,87975,90588,90665,90666,93178,96572,97828,97829,97830,99004,99175,99913,101643,103110,103995,103996,105621,107692,107693,107694,108878,113445,114745],"is_not":false,"summary":null,"term":"GO:0042274"},{"annotations":[111262,95910,103702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[95911,92892,100636,99217,104029,111454,101733,100854,101734,95585,92601,105082,111369,101641,90812,109561,103703,114633,89512],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[101642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[105083,111263,95912,103704],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[106052,84829,100664,85164,90861,94887,92957,96558,98019,88375,97778,108071,91930,89798,94623,106175,93973,88147,109613,87420,91832,112503,106646,89381,103445],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030490"},{"annotations":[101757,88729,104781,111810,94438,105174,95294,96856,107852,110788,112624,106463,97665,103183,112817,93141,83968,103044,105800,91782,95256,101758,102291,102052,87335,91783,96305,96688,85361,95257,84461,94437,97502,90434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000462"},{"annotations":[90862,107487,99960,107691,86007,107853,102882,96563,102883,107690,73757,112504,101750,107689,108152,97825,97827,93523,93522,92671,97826,101749,107488,114649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[88707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"},{"annotations":[109151,103705],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":107,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00889":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01201":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01296":null,"SJAG_01323":null,"SJAG_01338":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01752":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02094":null,"SJAG_02184":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02372":null,"SJAG_02475":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03262":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03583":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03905":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04342":null,"SJAG_04424":null,"SJAG_04472":null,"SJAG_04524":null,"SJAG_04562":null,"SJAG_04582":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_04998":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"ribosomal small subunit biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal small subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042274","terms_by_termid":{"GO:0000028":null,"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:0034462":null,"GO:0042274":null,"GO:1904812":null}}


id: PBO:0051979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 2","termid":"PBO:0051979"}


id: PBO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-like","termid":"PBO:0005163"}


id: GO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations within an organism or cell.","definition_xrefs":["GOC:ceb","GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete di-, tri-valent inorganic cation homeostasis (obsolete GO:0055066)","synonyms":[{"name":"di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0055066"}


id: PBO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_metabolic_process","termid":"PBO:0027068"}


id: GO:0140284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contact site between the endoplasmic reticulum membrane and the endosome membrane.","definition_xrefs":["PMID:24105263","PMID:30220460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-endosome membrane contact site","synonyms":[{"name":"ER-endosome membrane contact site","type":"exact"}],"termid":"GO:0140284"}


id: PBO:0026824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_export","termid":"PBO:0026824"}


id: GO:0180011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which dormant, translationally inactive mRNAs become activated, or mRNAs become stabilized, via the elongation of their poly(A) tails in the cytosol.","definition_xrefs":["PMID:21536428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"cytosolic mRNA polyadenylation","termid":"GO:0180011"}


id: GO:0051496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament bundle assembly","termid":"GO:0032233"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"positively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"positive regulation of stress fiber assembly","synonyms":[{"name":"activation of stress fiber formation","type":"narrow"},{"name":"positive regulation of stress fibre biosynthesis","type":"related"},{"name":"positive regulation of stress fibre formation","type":"related"},{"name":"stimulation of stress fiber formation","type":"narrow"},{"name":"up regulation of stress fiber formation","type":"related"},{"name":"up-regulation of stress fiber formation","type":"exact"},{"name":"upregulation of stress fiber formation","type":"related"}],"termid":"GO:0051496"}


id: GO:1990216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances transcription of genes into mRNA in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21994350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host transcription","termid":"GO:0052026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host transcription","synonyms":[{"name":"positive regulation by symbiont of host transcription","type":"exact"}],"termid":"GO:1990216"}


id: PBO:0071815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 10","termid":"PBO:0071815"}


id: GO:1900816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ochratoxin A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ochratoxin A metabolic process","synonyms":[{"name":"Ochratoxin A metabolism","type":"exact"}],"termid":"GO:1900816"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: PBO:0074777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3J","termid":"PBO:0074777"}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["PMID:27286964","RHEA:24935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: GO:0042726
data:
  {"annotated_genes":["SJAG_04711","SJAG_01937","SJAG_01054","SJAG_04845","SJAG_00480","SJAG_02360","SJAG_02491","SJAG_00376","SJAG_00491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[111789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[110183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[113228,110843,102859,106452,111790,97243,103055,83612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin-containing compound metabolism","type":"exact"},{"name":"riboflavin and derivative metabolic process","type":"related"},{"name":"riboflavin and derivative metabolism","type":"related"},{"name":"vitamin B2 and derivative metabolic process","type":"related"},{"name":"vitamin B2 and derivative metabolism","type":"related"}],"termid":"GO:0042726","terms_by_termid":{"GO:0006747":null,"GO:0009231":null,"GO:0009398":null,"GO:0046444":null}}


id: PBO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_normal,_unseptated_germ_tube_morphology","termid":"PBO:0031066"}


id: PBO:0065476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 13","termid":"PBO:0065476"}


id: GO:1903965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monounsaturated fatty acid.","definition_xrefs":["GOC:TermGenie","PMID:16443825","GOC:hjd","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"monounsaturated fatty acid catabolic process","synonyms":[{"name":"monounsaturated fatty acid breakdown","type":"exact"},{"name":"monounsaturated fatty acid catabolism","type":"exact"},{"name":"monounsaturated fatty acid degradation","type":"exact"}],"termid":"GO:1903965"}


id: PBO:0084447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannitol dehydrogenase; MAN2 has a paralog, DSF1, that arose from a segmental duplication","termid":"PBO:0084447"}


id: PBO:0084905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial type 2C protein phosphatase (PP2C); involved in regulation of pyruvate dehydrogenase activity by dephosphorylating the serine 133 of the Pda1p subunit; localizes to the intermembrane space and is imported via the presequence pathway and processed by the inner membrane protease (Imp1p-Imp2p); acts in concert with kinases Pkp1p and Pkp2p and phosphatase Ptc6p","termid":"PBO:0084905"}


id: GO:0033064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric DNA recombinase mediator complex that contains the Rad51 paralogs RAD51D and XRCC2, or orthologs thereof; conserved from fission yeast to human but absent from budding yeast.","definition_xrefs":["GOC:mah","GOC:vw","PMID:16093548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"XRCC2-RAD51D complex","synonyms":[{"name":"DX2 complex","type":"exact"}],"termid":"GO:0033064"}


id: PBO:0065603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 antisense RNA 1","termid":"PBO:0065603"}


id: PBO:0062765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily S member 1 pseudogene","termid":"PBO:0062765"}


id: GO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of floral organ abscission, the controlled shedding of floral organs.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of floral organ abscission","termid":"GO:0060860"}


id: PBO:0086080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to Tfs1p; transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus","termid":"PBO:0086080"}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: GO:0008052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between a sensory organ and the surrounding tissue are established and maintained.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of animal organ boundary","termid":"GO:0010160"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ boundary specification","synonyms":[{"name":"sense organ boundary specification","type":"exact"}],"termid":"GO:0008052"}


id: GO:0038151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 2 receptor (CCR2) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR2 signaling pathway","termid":"GO:0038150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL2-activated CCR2 signaling pathway","synonyms":[{"name":"CCL2/CCR2 signaling pathway","type":"exact"}],"termid":"GO:0038151"}


id: PATO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of count","synonyms":[{"name":"variable number","type":"related"}],"termid":"PATO:0005001"}


id: PBO:0057648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-1","termid":"PBO:0057648"}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_06622","SJAG_03373","SJAG_03091","SJAG_01310","SJAG_04152","SJAG_02945","SJAG_02135","SJAG_02107","SJAG_02009","SJAG_04495","SJAG_02369","SJAG_01012","SJAG_03828","SJAG_04334","SJAG_03903","SJAG_06621","SJAG_03660","SJAG_01539","SJAG_00605","SJAG_00027","SJAG_00461","SJAG_00839","SJAG_04192","SJAG_02796","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101190],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[105468,100554,105471,105009,101535,105008,105469,105004,105472,101534,101898,105003,91120,94370,90630,105005,94100,99743,105006,105467,105007,105470,112422,101533,101897,99485,105473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90085,102572,108933,92823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD metabolic process","termid":"GO:0019674"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01539":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006116":null,"GO:0006734":null,"GO:0061621":null}}


id: SO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA_gene","synonyms":[{"name":"ncRNA gene","type":"exact"},{"name":"non-coding RNA gene","type":"exact"}],"termid":"SO:0001263"}


id: GO:0018601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrophenol + H+ + NADH + O2 = 4-nitrocatechol + H2O + NAD+.","definition_xrefs":["RHEA:12568","EC:1.14.13.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-nitrophenol 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R03023","MetaCyc:4-NITROPHENOL-2-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0230"],"synonyms":[{"name":"4-nitrophenol hydroxylase activity","type":"related"},{"name":"4-nitrophenol,NADH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"4-nitrophenol-2-hydroxylase activity","type":"related"}],"termid":"GO:0018601"}


id: PBO:0046150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastase, neutrophil expressed","termid":"PBO:0046150"}


id: PBO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_symbiosis","termid":"PBO:0034297"}


id: PBO:0075627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein","termid":"PBO:0075627"}


id: PBO:0029702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029702"}


id: PBO:0054048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1389","termid":"PBO:0054048"}


id: PBO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP16 nucleolar protein","termid":"PBO:0061236"}


id: FYPO:0009026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing methionine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on methionine nitrogen source","synonyms":[{"name":"increased growth on methionine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on methionine nitrogen source","type":"exact"}],"termid":"FYPO:0009026"}


id: PBO:0029395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029395"}


id: GO:0009414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water deprivation","synonyms":[{"name":"drought tolerance","type":"related"},{"name":"response to dehydration","type":"exact"},{"name":"response to drought","type":"exact"},{"name":"response to thirst","type":"exact"}],"termid":"GO:0009414"}


id: PBO:0091120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease inhibitor 178 family","termid":"PBO:0091120"}


id: GO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + L-lysine = phosphate + N6-acetyl-L-lysine.","definition_xrefs":["EC:2.3.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lysine N-acetyltransferase activity, acting on acetyl phosphate as donor","secondary_identifiers":["RHEA:14417","Reactome:R-HSA-5618328","MetaCyc:LYSINE-N-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-5693001"],"synonyms":[{"name":"LAT activity","type":"related"},{"name":"acetyl-phosphate:L-lysine 6-N-acetyltransferase activity","type":"related"},{"name":"acetyl-phosphate:L-lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine N(6)-acetyltransferase activity","type":"related"},{"name":"lysine N6-acetyltransferase activity","type":"related"},{"name":"lysine acetyltransferase activity","type":"exact"}],"termid":"GO:0004468"}


id: PBO:0076177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1E member 1","termid":"PBO:0076177"}


id: PBO:0056134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysozyme like 4","termid":"PBO:0056134"}


id: PBO:0027610
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-replication_origin_firing_during_mitotic_G2_phase","termid":"PBO:0027610"}


id: PBO:0068791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 28, pseudogene","termid":"PBO:0068791"}


id: GO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ADP-D-ribose, an ADP-aldose having ribose as the aldose fragment.","definition_xrefs":["PMID:20088964","GOC:mah","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ADP-D-ribose binding","synonyms":[{"name":"ADP-ribose binding","type":"broad"}],"termid":"GO:0072570"}


id: GO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane raft that forms small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Examples include flask-shaped invaginations of the plasma membrane in adipocytes associated with caveolin proteins, and minute pits or incuppings of the cell membrane formed during pinocytosis. Caveolae may be pinched off to form free vesicles within the cytoplasm.","definition_xrefs":["PMID:16645198","GOC:mah","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft","termid":"GO:0044853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"caveola","secondary_identifiers":["GO:0016599","Wikipedia:Caveolae"],"synonyms":[{"name":"caveolae","type":"exact"},{"name":"caveolar membrane","type":"related"}],"termid":"GO:0005901"}


id: PBO:0031740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mating_type_switching","termid":"PBO:0031740"}


id: PR:Q9UTD5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-conjugating enzyme ATG10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.04","synonyms":[{"name":"Spom972h-atg10","type":"exact"},{"name":"autophagy-related protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTD5"}


id: PBO:0084891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084891"}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing phosphate.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: PBO:0060245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC binding protein 2","termid":"PBO:0060245"}


id: PBO:0086685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by SAGE","termid":"PBO:0086685"}


id: GO:0023053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a mechanical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by mechanical effect (obsolete GO:0023053)","synonyms":[{"name":"signal initiation by mechanical effect","type":"exact"}],"termid":"GO:0023053"}


id: FYPO:0005344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which formation of the mitotic spindle midzone, the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap, does not occur.","definition_xrefs":["PomBase:mah","GO:0051256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000641","FYPO:0001320","FYPO:0000337","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic spindle midzone assembly","synonyms":[{"name":"abolished mitotic spindle midzone assembly during vegetative growth","type":"exact"},{"name":"abolished spindle midzone assembly during mitotic cell cycle","type":"related"},{"name":"abolished spindle midzone assembly involved in mitosis","type":"exact"},{"name":"mitotic spindle midzone assembly abolished","type":"exact"}],"termid":"FYPO:0005344"}


id: PBO:0070698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 2","termid":"PBO:0070698"}


id: FYPO:0004921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal positive regulation of protein kinase activity","synonyms":[{"name":"normal activation of protein kinase activity","type":"narrow"},{"name":"normal positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"normal positive regulation of protein kinase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004921"}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12814:SF0","OMA:SCHPO01341","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: PBO:0058256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4634","termid":"PBO:0058256"}


id: PBO:0088066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease; cleaves ubiquitin from ubiquitinated proteins; present in the nucleus and cytoplasm","termid":"PBO:0088066"}


id: PR:000050518
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PMID:22375066","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/UnPhos:(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, PR:000026291","type":"narrow"},{"name":"ssp2/UnPhos:(T189)","type":"exact"}],"termid":"PR:000050518"}


id: PBO:0073051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 9 (gene/pseudogene)","termid":"PBO:0073051"}


id: PBO:0084723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; required for assembly of cytochrome c oxidase","termid":"PBO:0084723"}


id: PATO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000747 coordination value (obsolete PATO:0000747)","termid":"PATO:0000747"}


id: GO:0039647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host poly(A)-binding protein (PABP) activity. PABP binds to the poly(A) tail of mRNA to facilitate translation.","definition_xrefs":["UniProtKB-KW:KW-1101"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host poly(A)-binding protein activity (obsolete GO:0039647)","synonyms":[{"name":"inhibition of host poly(A)-binding protein by virus","type":"exact"},{"name":"suppression by virus of host PABP activity","type":"exact"}],"termid":"GO:0039647"}


id: PBO:0050849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 2","termid":"PBO:0050849"}


id: PBO:0081919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 888","termid":"PBO:0081919"}


id: PR:O94630
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.12","synonyms":[{"name":"actin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arp1","type":"exact"},{"name":"actin-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94630"}


id: GO:0060395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of a SMAD protein, leading to the formation of a complex with co-SMADs, which translocates to the nucleus and regulates transcription of specific target genes.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"},{"relation_name":"part_of","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SMAD protein signal transduction","termid":"GO:0060395"}


id: GO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylthioadenosine + H2O = adenine + 5-methylthio-D-ribose.","definition_xrefs":["EC:3.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"methylthioadenosine nucleosidase activity","secondary_identifiers":["MetaCyc:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN","RHEA:13617"],"synonyms":[{"name":"5'-methylthioadenosine nucleosidase activity","type":"related"},{"name":"MTA nucleosidase activity","type":"related"},{"name":"MeSAdo nucleosidase activity","type":"related"},{"name":"S-methyl-5'-thioadenosine adeninehyrolase activity","type":"related"},{"name":"methylthioadenosine methylthioribohydrolase activity","type":"related"}],"termid":"GO:0008930"}


id: PATO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hairy quality inhering in a bearer by virtue of the bearer's being covered with setae.","definition_xrefs":["ISBN:0913424137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setose","termid":"PATO:0002289"}


id: GO:0031380
data:
  {"annotated_genes":["SJAG_03193","SJAG_02725","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95651,111479,114019],"is_not":false,"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A complex required for RNAi mediated heterochromatin assembly. In S. pombe this contains RNA-directed RNA polymerase, a putative helicase and a protein containing a pap25 associated domain.","definition_xrefs":["GOC:vw","PMID:15607976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RDRC","type":"exact"},{"name":"Rdr1 complex","type":"narrow"}],"termid":"GO:0031380","terms_by_termid":{"GO:0031380":null}}


id: PBO:0049063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 78","termid":"PBO:0049063"}


id: GO:0045342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class II biosynthetic process","synonyms":[{"name":"MHC class II anabolism","type":"exact"},{"name":"MHC class II biosynthesis","type":"exact"},{"name":"MHC class II formation","type":"exact"},{"name":"MHC class II synthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045342"}


id: PBO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3 pseudogene 2","termid":"PBO:0045698"}


id: GO:0047636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,2'-iminodipropanoate + H2O + NAD+ = L-alanine + H+ + NADH + pyruvate.","definition_xrefs":["EC:1.5.1.17","RHEA:17589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alanopine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00398","MetaCyc:ALANOPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2,2'-iminodipropanoate:NAD+ oxidoreductase (L-alanine-forming)","type":"related"},{"name":"ADH","type":"related"},{"name":"ALPDH","type":"related"},{"name":"alanopine: NAD oxidoreductase activity","type":"related"},{"name":"alanopine:NAD oxidoreductase activity","type":"related"},{"name":"alanopine[meso-N-(1-carboxyethyl)-alanine]dehydrogenase activity","type":"related"},{"name":"meso-N-(1-carboxyethyl)-alanine:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047636"}


id: PR:O42868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase SSU72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20383:SF9","PRO:DNx","OMA:SCHPO01329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.04","secondary_identifiers":["UniProtKB:O42868"],"synonyms":[{"name":"CTD phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SSU72","type":"exact"},{"name":"suppressor of SUA7 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42868"}


id: PBO:0062097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 47","termid":"PBO:0062097"}


id: PBO:0057018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106a","termid":"PBO:0057018"}


id: PBO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19","termid":"PBO:0045232"}


id: PATO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis.","definition_xrefs":["PATOC:JC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antero-posteriorly flattened","synonyms":[{"name":"antero-posteriorly compressed","type":"exact"}],"termid":"PATO:0002252"}


id: PR:Q9HGL8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl4301 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L43-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.04c","synonyms":[{"name":"L37A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl4301","type":"exact"}],"termid":"PR:Q9HGL8"}


id: GO:1901594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to capsazepine","termid":"GO:1901594"}


id: FYPO:0007823
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115632,115633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which any aspect of quorum sensing is abnormal.","definition_xrefs":["PomBase:mah","GO:0009372","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal quorum sensing","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"termid":"FYPO:0007823","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: GO:1905758
data:
  {"annotated_genes":["SJAG_04666","SJAG_04597","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83675,88518,90521],"is_not":false,"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary cell septum biogenesis.","definition_xrefs":["GOC:TermGenie","PMID:27898700","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"regulation of primary cell septum biogenesis","termid":"GO:1905756"},{"relation_name":"positively_regulates","term_name":"primary cell septum biogenesis","termid":"GO:0031671"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000281","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"positive regulation of primary cell septum biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905758","terms_by_termid":{"GO:1905758":null}}


id: PBO:0068688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 69, pseudogene","termid":"PBO:0068688"}


id: MOD:00553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a (2-sulfanylethyl)sulfanyl (or thioethylthiol) group for a hydroxy group.","definition_xrefs":["Unimod:200","PubMed:11507762","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-ethanedithiol modified residue","synonyms":[{"name":"1,2-ethanedithiol (EDT)","type":"exact"},{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"}],"termid":"MOD:00553"}


id: GO:1905707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["PMID:12809520","PMID:15294286","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905706"},{"relation_name":"is_a","term_name":"negative regulation of ATP biosynthetic process","termid":"GO:2001170"},{"relation_name":"negatively_regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of mitochondrial ATP synthesis coupled proton transport","termid":"GO:1905707"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: PBO:0056103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 8","termid":"PBO:0056103"}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["EC:3.1.3.47","MetaCyc:3.1.3.47-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0004721","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: PBO:0039148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 3","termid":"PBO:0039148"}


id: GO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state.","definition_xrefs":["GOC:mtg_mpo","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"},{"relation_name":"part_of","term_name":"bone maturation","termid":"GO:0070977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ossification involved in bone maturation","synonyms":[{"name":"ossification involved in bone modeling","type":"narrow"},{"name":"ossification involved in skeletal development","type":"exact"}],"termid":"GO:0043931"}


id: GO:1903038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte cell-cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","PMID:21106532","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"negatively_regulates","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of leukocyte cell-cell adhesion","synonyms":[{"name":"down regulation of leukocyte adhesion","type":"exact"},{"name":"down regulation of leukocyte cell adhesion","type":"exact"},{"name":"down regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"down-regulation of leukocyte adhesion","type":"exact"},{"name":"down-regulation of leukocyte cell adhesion","type":"exact"},{"name":"down-regulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"downregulation of leukocyte adhesion","type":"exact"},{"name":"downregulation of leukocyte cell adhesion","type":"exact"},{"name":"downregulation of leukocyte cell-cell adhesion","type":"exact"},{"name":"inhibition of leukocyte adhesion","type":"narrow"},{"name":"inhibition of leukocyte cell adhesion","type":"narrow"},{"name":"inhibition of leukocyte cell-cell adhesion","type":"narrow"},{"name":"negative regulation of leukocyte adhesion","type":"exact"},{"name":"negative regulation of leukocyte cell adhesion","type":"exact"}],"termid":"GO:1903038"}


id: PBO:0073092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 1","termid":"PBO:0073092"}


id: GO:0030899
data:
  {"annotated_genes":["SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113930],"is_not":false,"summary":null,"term":"GO:0030899"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate. This reaction requires the presence of calcium ion (Ca2+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"calcium-dependent ATPase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030899","terms_by_termid":{"GO:0030899":null}}


id: GO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a long-chain fatty acid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm","GOC:jl","PMID:22022213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transport","termid":"GO:0015909"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"long-chain fatty acid import into cell","synonyms":[{"name":"long-chain fatty acid import","type":"related"},{"name":"long-chain fatty acid uptake","type":"exact"}],"termid":"GO:0044539"}


id: PBO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 2","termid":"PBO:0044204"}


id: GO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a water group from a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dehydration","synonyms":[{"name":"protein amino acid dehydration","type":"exact"}],"termid":"GO:0018249"}


id: PBO:0055740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox transcription factor 1 alpha","termid":"PBO:0055740"}


id: GO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted and contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal signaling involved in prostate gland development","synonyms":[{"name":"epithelial-mesenchymal signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060738"}


id: PBO:0041014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 1","termid":"PBO:0041014"}


id: PBO:0077471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191B","termid":"PBO:0077471"}


id: PBO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCHS1 antisense RNA 1","termid":"PBO:0044627"}


id: PBO:0064255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A3 pseudogene 1","termid":"PBO:0064255"}


id: PBO:0085433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; TPO3 has a paralog, TPO2, that arose from the whole genome duplication","termid":"PBO:0085433"}


id: GO:0009404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"toxin metabolic process","synonyms":[{"name":"toxin metabolism","type":"exact"}],"termid":"GO:0009404"}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: PBO:0063527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 8","termid":"PBO:0063527"}


id: GO:1903960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion transmembrane transport","synonyms":[{"name":"down regulation of anion transmembrane transport","type":"exact"},{"name":"down-regulation of anion transmembrane transport","type":"exact"},{"name":"downregulation of anion transmembrane transport","type":"exact"},{"name":"inhibition of anion transmembrane transport","type":"narrow"}],"termid":"GO:1903960"}


id: PBO:0044310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase like","termid":"PBO:0044310"}


id: PBO:0068829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 67, pseudogene","termid":"PBO:0068829"}


id: GO:0140164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Golgi transport complex, a multisubunit tethering complex of the CATCHR family.","definition_xrefs":["PMID:28100664","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Golgi transport complex binding","synonyms":[{"name":"COG complex binding","type":"exact"}],"termid":"GO:0140164"}


id: GO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular polysaccharide metabolic process (obsolete GO:0044264)","synonyms":[{"name":"cellular glycan metabolic process","type":"exact"},{"name":"cellular glycan metabolism","type":"exact"},{"name":"cellular polysaccharide metabolism","type":"exact"}],"termid":"GO:0044264"}


id: GO:0033726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + 2 oxidized ferredoxin = an acid + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["EC:1.2.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aldehyde ferredoxin oxidoreductase activity","secondary_identifiers":["RHEA:16421","MetaCyc:1.2.7.5-RXN"],"synonyms":[{"name":"AOR","type":"related"},{"name":"aldehyde:ferredoxin oxidoreductase activity","type":"related"},{"name":"tungsten-containing aldehyde ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0033726"}


id: PBO:0041036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF pseudogene 1","termid":"PBO:0041036"}


id: GO:1990333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the spindle checkpoint, preventing the activation of the anaphase-promoting complex until all chromosomes are correctly attached in a bipolar fashion to the mitotic spindle. In budding yeast this complex consists of Mad2p and Cdc20p, and in mammalian cells it consists of MAD2 and CDC20.","definition_xrefs":["GOC:bhm","PMID:15879521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"mitotic checkpoint complex","termid":"GO:0033597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic checkpoint complex, CDC20-MAD2 subcomplex","synonyms":[{"name":"CDC20-MAD2 complex","type":"exact"}],"termid":"GO:1990333"}


id: FYPO:0000319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of spores and germinated spores most of which go on to divide once or twice. Some germinated spores remain septated and do not complete cell division.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores and divided germinated spores (obsolete FYPO:0000319)","synonyms":[{"name":"put cut","type":"related"}],"termid":"FYPO:0000319"}


id: GO:0042614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD70, a receptor found on the surface of most activated B cells and some activated T cells.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CD70 receptor binding","synonyms":[{"name":"CD27 receptor activity","type":"related"},{"name":"CD27L binding","type":"exact"}],"termid":"GO:0042614"}


id: PBO:0069043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 288, pseudogene","termid":"PBO:0069043"}


id: PBO:0028316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_wtf-derived_RNA_level","termid":"PBO:0028316"}


id: GO:1904498
data:
  {"annotated_genes":["SJAG_04703","SJAG_02831","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88425,106879,114681],"is_not":false,"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"Any protein localization to actomyosin contractile ring that is involved in mitotic cytokinesis.","definition_xrefs":["PMID:25688133","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"is_a","term_name":"protein localization to actomyosin contractile ring","termid":"GO:1990179"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localisation to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"protein localization to actomyosin contractile ring during mitotic cytokinesis","type":"related"},{"name":"protein localization to actomyosin contractile ring involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1904498","terms_by_termid":{"GO:1904498":null}}


id: PBO:0085328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate; forms membrane-associated signal transduction complex with Vps15p to regulate protein sorting; activated by the GTP-bound form of Gpa1p; a fraction is localized, with Vps15p, to nuclear pores at nucleus-vacuole junctions and may facilitate transcription elongation for genes positioned at the nuclear periphery","termid":"PBO:0085328"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: GO:0055015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood out of the organ.","definition_xrefs":["GOC:devbiol","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"ventricular cardiac muscle cell differentiation","termid":"GO:0055012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell development","synonyms":[{"name":"ventricular cardiomyocyte development","type":"exact"},{"name":"ventricular heart muscle cell development","type":"exact"}],"termid":"GO:0055015"}


id: PBO:0085751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) in response to starvation; activated by uncharged tRNAs and the Gcn1p-Gcn20p complex; contributes to DNA damage checkpoint control","termid":"PBO:0085751"}


id: PBO:0064794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1L divergent transcript","termid":"PBO:0064794"}


id: PBO:0068039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: SO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to delete a uridine.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000918 delete_U (obsolete SO:0000918)","synonyms":[{"name":"delete U","type":"exact"}],"termid":"SO:0000918"}


id: GO:0035378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which carbon dioxide (CO2) is transported across a membrane.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon dioxide transport","termid":"GO:0015670"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"carbon dioxide transmembrane transport","synonyms":[{"name":"carbon dioxide membrane transport","type":"exact"}],"termid":"GO:0035378"}


id: PBO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 2","termid":"PBO:0044378"}


id: PBO:0067536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 680, pseudogene","termid":"PBO:0067536"}


id: PBO:0065946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD1 pseudogene 2","termid":"PBO:0065946"}


id: FYPO:0003016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to non-ionic osmotic stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during cellular response to non-ionic osmotic stress","synonyms":[{"name":"cell lysis during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"lysed cell in response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0003016"}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: PBO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13","termid":"PBO:0011098"}


id: PBO:0017704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4 nonhomologous end joining factor Xrc4","termid":"PBO:0017704"}


id: PBO:0029097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cysteine_synthase_activity","termid":"PBO:0029097"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: PBO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 7 homolog A","termid":"PBO:0072584"}


id: PBO:0076798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, mitochondrial","termid":"PBO:0076798"}


id: FYPO:0001303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0005447"],"is_obsolete":false,"name":"abnormal myristoyl-CoA ligase activity","synonyms":[{"name":"abnormal myristoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001303"}


id: GO:0099559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which alignment between postsynaptic density and presynaptic active zone is maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of alignment of postsynaptic density and presynaptic active zone","termid":"GO:0099559"}


id: PR:Q09817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal export protein NMD3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00310","PANTHER:PTHR12746:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal export protein nmd3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.03","secondary_identifiers":["UniProtKB:Q09817"],"synonyms":[{"name":"Spom972h-NMD3","type":"exact"}],"termid":"PR:Q09817"}


id: GO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + Neu5Gc = diphosphate + CMP-Neu5Gc.","definition_xrefs":["PMID:11479279","ISBN:978-1-60805-067-3","PMID:8381411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-glycolylneuraminic acid (Neu5Gc) cytidylyltransferase activity","synonyms":[{"name":"CMP-Neu5Gc synthetase activity","type":"exact"}],"termid":"GO:0090632"}


id: PBO:0051975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO family member 2","termid":"PBO:0051975"}


id: PBO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 67","termid":"PBO:0050364"}


id: SO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified glutamine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_glutamine","secondary_identifiers":["MOD:00907"],"synonyms":[{"name":"ModGln","type":"exact"},{"name":"modified L glutamine","type":"exact"},{"name":"modified L-glutamine","type":"exact"}],"termid":"SO:0001394"}


id: FYPO:0008024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell (total or free) is lower than normal.","definition_xrefs":["PMID:35012333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular polyphosphate level","synonyms":[{"name":"decreased level of polyphosphate in cell","type":"broad"}],"termid":"FYPO:0008024"}


id: PBO:0055334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2762","termid":"PBO:0055334"}


id: PBO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distinct from protein kinase C pathway and osmosensing MAP-kinase pathway","termid":"PBO:0005237"}


id: FYPO:0003210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum that is in an abnormal location and is not perpendicular to the long axis of the cell. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"mislocalized, misoriented septum","synonyms":[{"name":"abnormal septum localization and orientation","type":"related"},{"name":"abnormal septum location and orientation","type":"exact"},{"name":"abnormal septum position and orientation","type":"exact"},{"name":"abnormal septum positioning and orientation","type":"related"},{"name":"asymmetric, misoriented septum","type":"exact"},{"name":"asymmetrically located, misoriented septum","type":"exact"},{"name":"mislocalised, misoriented septum","type":"exact"},{"name":"mislocalized, misoriented septum during mitotic cell cycle","type":"related"},{"name":"mislocalized, misoriented septum during vegetative growth","type":"exact"},{"name":"misplaced, misoriented septum","type":"exact"}],"termid":"FYPO:0003210"}


id: GO:0090577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase IV transcription regulator complex","synonyms":[{"name":"RNA polymerase IV transcription factor complex","type":"narrow"}],"termid":"GO:0090577"}


id: GO:0033516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine anabolism from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0033516"}


id: GO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a renal interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast development","synonyms":[{"name":"kidney interstitial cell development","type":"exact"}],"termid":"GO:0072141"}


id: PBO:0067751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 50","termid":"PBO:0067751"}


id: FYPO:0003704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of histone deacetylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal histone deacetylase activity","termid":"FYPO:0003703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone deacetylase activity","synonyms":[{"name":"reduced histone deacetylase activity","type":"exact"}],"termid":"FYPO:0003704"}


id: PBO:0110975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase, implicated in energy generation","termid":"PBO:0110975"}


id: GO:0035522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the ubiquitin group from a monoubiquitinated histone H2A protein.","definition_xrefs":["PMID:20436459","PMID:18226187","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete monoubiquitinated histone H2A deubiquitination (obsolete GO:0035522)","synonyms":[{"name":"monoubiquitinated histone H2A deubiquitinylation","type":"exact"},{"name":"monoubiquitinated histone H2A deubiquitylation","type":"exact"}],"termid":"GO:0035522"}


id: PBO:0073498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 3","termid":"PBO:0073498"}


id: GO:0015073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.137"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase, class I, regulator activity (obsolete GO:0015073)","synonyms":[{"name":"phosphatidylinositol 3-kinase, class I, regulator activity","type":"exact"}],"termid":"GO:0015073"}


id: PBO:0082919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c heme lyase (holocytochrome c synthase); attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in mitochondrial intermembrane space; human homolog HCCS implicated in microphthalmia with linear skin defects (MLS), and can complement yeast null mutant","termid":"PBO:0082919"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: PBO:0040683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 1","termid":"PBO:0040683"}


id: PBO:0082463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcineurin B; regulatory subunit of calcineurin, a Ca++/calmodulin-regulated type 2B protein phosphatase which regulates Crz1p (stress-response transcription factor); other calcineurin subunit encoded by CNA1 and/or CMP1; regulates function of Aly1p alpha-arrestin; myristoylation by Nmt1p reduces calcineurin activity in response to submaximal Ca signals, is needed to prevent constitutive phosphatase activity; protein abundance increases in response to DNA replication stress","termid":"PBO:0082463"}


id: PBO:0050186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 3","termid":"PBO:0050186"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: PBO:0078364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 8-2","termid":"PBO:0078364"}


id: GO:0030269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydromethanopterin + coenzyme M = 5,6,7,8-tetrahydromethanopterin + methyl-coenzyme M. 2-(methylthio)ethanesulfonate is also known as methyl-CoM.","definition_xrefs":["EC:2.1.1.86","RHEA:53492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyl-5,6,7,8-tetrahydromethanopterin-dependent methyltransferase activity","termid":"GO:0042086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tetrahydromethanopterin S-methyltransferase activity","secondary_identifiers":["UM-BBD_reactionID:r0355","GO:0018709","KEGG_REACTION:R04347","MetaCyc:2.1.1.86-RXN"],"synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethanesulfonate 2-methyltransferase activity","type":"related"},{"name":"N(5)-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"N5-methyltetrahydromethanopterin--coenzyme M methyltransferase activity","type":"related"},{"name":"tetrahydromethanopterin methyltransferase activity","type":"related"}],"termid":"GO:0030269"}


id: PBO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L49, fusion protein (predicted)","termid":"PBO:0004251"}


id: PBO:0064896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'beta","termid":"PBO:0064896"}


id: PBO:0030252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_trehalose_level","termid":"PBO:0030252"}


id: PBO:0111338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATP-dependent RNA helicase Has1","termid":"PBO:0111338"}


id: PBO:0064561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase 2","termid":"PBO:0064561"}


id: PBO:0077788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III beta","termid":"PBO:0077788"}


id: GO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutive glucose:proton symporter activity (obsolete GO:0005357)","synonyms":[{"name":"constitutive hydrogen/glucose transporter activity","type":"broad"},{"name":"constitutive hydrogen:glucose symporter activity","type":"exact"},{"name":"constitutive hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005357"}


id: PBO:0066672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 1","termid":"PBO:0066672"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: PBO:0087976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide","termid":"PBO:0087976"}


id: PBO:0113799
data:
  {"annotated_genes":["SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"pombase_family_or_domain":[{"annotations":[56065],"is_not":false,"summary":null,"term":"PBO:0113799"}]},"cv_name":"pombase_family_or_domain","gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":0,"is_obsolete":false,"name":"warning frameshifted","termid":"PBO:0113799","terms_by_termid":{"PBO:0113799":null}}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: PBO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2489","termid":"PBO:0055072"}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["GOC:dph","MetaCyc:P341-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: PBO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide FF-amide peptide precursor","termid":"PBO:0061306"}


id: PBO:0089353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp2","termid":"PBO:0089353"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: SO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A comment about the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remark","termid":"SO:0000700"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: PBO:0089142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain Sre1 cleavage protein","termid":"PBO:0089142"}


id: PBO:0039826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor related protein 1","termid":"PBO:0039826"}


id: PATO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solubility which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"soluble in","termid":"PATO:0001537"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased solubility","synonyms":[{"name":"high solubility","type":"exact"}],"termid":"PATO:0001663"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: PBO:0058251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4538","termid":"PBO:0058251"}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: GO:0033604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a catecholamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine secretion","synonyms":[{"name":"down regulation of catecholamine secretion","type":"exact"},{"name":"down-regulation of catecholamine secretion","type":"exact"},{"name":"downregulation of catecholamine secretion","type":"exact"},{"name":"inhibition of catecholamine secretion","type":"narrow"}],"termid":"GO:0033604"}


id: PBO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA family member 4, pseudogene","termid":"PBO:0060433"}


id: PBO:0038731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 2, smooth muscle","termid":"PBO:0038731"}


id: PBO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 6","termid":"PBO:0072179"}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: PBO:0074186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 7","termid":"PBO:0074186"}


id: PBO:0085326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol phosphate phosphatase; role in early and medial Golgi PtdIns4P hydrolysis; regulated by Vps74p interaction; ER localized transmembrane protein which cycles through the Golgi; role in protein trafficking, processing, secretion, and cell wall maintenance; regulates sphingolipid biosynthesis by modulating PtdIns(4)P metabolism; PtdIns4P PPase activity is crucial for autophagosome-vacuole fusion during autophagy; human homolog SACM1L complements autophagy defects of the null","termid":"PBO:0085326"}


id: PR:O94597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.07 gene.","definition_xrefs":["UniProtKB:O94597","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.07","synonyms":[{"name":"Spom972h-SPCC622.07","type":"exact"}],"termid":"PR:O94597"}


id: PBO:0079682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3C","termid":"PBO:0079682"}


id: GO:1900177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aflatoxin biosynthetic process.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"aflatoxin biosynthetic process","termid":"GO:0045122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of aflatoxin biosynthetic process","synonyms":[{"name":"regulation of aflatoxin anabolism","type":"exact"},{"name":"regulation of aflatoxin biosynthesis","type":"exact"},{"name":"regulation of aflatoxin formation","type":"exact"},{"name":"regulation of aflatoxin synthesis","type":"exact"}],"termid":"GO:1900177"}


id: PBO:0000191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 (predicted)","termid":"PBO:0000191"}


id: GO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"negatively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-13 production","secondary_identifiers":["GO:2000666","GO:0045367"],"synonyms":[{"name":"down regulation of interleukin-13 production","type":"exact"},{"name":"down-regulation of interleukin-13 production","type":"exact"},{"name":"downregulation of interleukin-13 production","type":"exact"},{"name":"inhibition of interleukin-13 production","type":"narrow"},{"name":"negative regulation of IL-13 production","type":"exact"},{"name":"negative regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032696"}


id: PBO:0080536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 1","termid":"PBO:0080536"}


id: SO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons CTN (CTT, CTC, CTA and CTG), TTA and TTG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine","synonyms":[{"name":"L","type":"exact"},{"name":"Leu","type":"exact"}],"termid":"SO:0001437"}


id: PBO:0068593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 44, pseudogene","termid":"PBO:0068593"}


id: GO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an endothelial cell. An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:mah","CL:0000115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell apoptotic process","synonyms":[{"name":"apoptosis of endothelial cells","type":"exact"},{"name":"endothelial cell apoptosis","type":"narrow"},{"name":"endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"killing of endothelial cells","type":"exact"},{"name":"programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:0072577"}


id: PBO:0082492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic core subunit, Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity","termid":"PBO:0082492"}


id: PBO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation","termid":"PBO:0036194"}


id: FYPO:0003578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which vacuolar transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuolar transport","synonyms":[{"name":"vacuolar transport: abnormal","type":"related"}],"termid":"FYPO:0003578"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_03538","SJAG_02420","SJAG_00381","SJAG_01970","SJAG_02406","SJAG_02421","SJAG_04866","SJAG_00827","SJAG_04282","SJAG_03362","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90397,95617,103458,109663,109669,110082,112087],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[85167,109757],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95620,106525,106526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: PATO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light orange","termid":"PATO:0001255"}


id: PBO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 7","termid":"PBO:0047548"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: PBO:0055366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2795","termid":"PBO:0055366"}


id: GO:1990067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of DNA recombination occurring within a single chromosome.","definition_xrefs":["PMID:7748165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"intrachromosomal DNA recombination","synonyms":[{"name":"intrastrand DNA recombination","type":"exact"}],"termid":"GO:1990067"}


id: PBO:0086012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; mRNA identified as translated by ribosome profiling data; overlaps the verified gene DIA1/YMR316W","termid":"PBO:0086012"}


id: GO:0000179
data:
  {"annotated_genes":["SJAG_03289","SJAG_02821"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59138],"is_not":false,"summary":null,"term":"GO:0000179"},{"annotations":[105176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"}]},"cv_name":"molecular_function","definition":"Catalysis of the dimethylation of two adjacent adenine residues in a rRNA, using S-adenosyl-L-methionine as a methyl donor.","definition_xrefs":["ISBN:1555811337","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02821":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"rRNA (adenine-N6,N6-)-dimethyltransferase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790994","Reactome:R-HSA-6793066","GO:0043790"],"synonyms":[{"name":"18S rRNA dimethylase activity","type":"exact"},{"name":"S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase activity","type":"exact"},{"name":"dimethyladenosine transferase activity","type":"exact"}],"termid":"GO:0000179","terms_by_termid":{"GO:0000179":null,"GO:0052909":null}}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: PBO:0058107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4322","termid":"PBO:0058107"}


id: PBO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 3","termid":"PBO:0052446"}


id: SO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of a few hundred to a few thousand bases in vertebrate genomes that are relatively GC and CpG rich; they are typically unmethylated and often found near the 5' ends of genes.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CpG_island","secondary_identifiers":["http://en.wikipedia.org/wiki/CpG_island"],"synonyms":[{"name":"CG island","type":"exact"},{"name":"CpG island","type":"exact"}],"termid":"SO:0000307"}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: GO:1990007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A configuration of endoplasmic reticulum (ER) found in Purkinje cells in the cerebellum and in axons in the lateral vestibular nucleus, consisting of parallel and interconnecting tubules whose outer surfaces are covered by particles or ringlike structures.","definition_xrefs":["NIF_Subcellular:sao2114874506","ISBN:9780195065718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"membrane stack","termid":"GO:1990007"}


id: PBO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 2","termid":"PBO:0047370"}


id: PBO:0043662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q7, hydroxylase","termid":"PBO:0043662"}


id: FYPO:0005808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of movement of one or more proteins within the plasma membrane of a spore is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane","termid":"FYPO:0005807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of protein movement within spore plasma membrane","termid":"FYPO:0005808"}


id: GO:0035888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + H2O + isoguanine = NH4+ + xanthine.","definition_xrefs":["PMID:21604715","RHEA:47720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"isoguanine deaminase activity","secondary_identifiers":["MetaCyc:RXN0-6708"],"synonyms":[{"name":"2-hydroxyadenine deaminase activity","type":"exact"},{"name":"2-oxoadenine deaminase activity","type":"exact"}],"termid":"GO:0035888"}


id: PBO:0042772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 78","termid":"PBO:0042772"}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: GO:1901222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the non-canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0042348","GO:0042345"],"synonyms":[{"name":"NF-KB import into nucleus","type":"narrow"},{"name":"NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"regulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901222"}


id: GO:1902338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","PMID:12202035","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in development","type":"related"},{"name":"down regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down regulation of morphogenetic apoptosis","type":"related"},{"name":"down-regulation of apoptosis involved in development","type":"related"},{"name":"down-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down-regulation of morphogenetic apoptosis","type":"related"},{"name":"downregulation of apoptosis involved in development","type":"related"},{"name":"downregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"downregulation of morphogenetic apoptosis","type":"related"},{"name":"inhibition of apoptosis involved in development","type":"related"},{"name":"inhibition of apoptosis involved in morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"inhibition of morphogenetic apoptosis","type":"related"},{"name":"negative regulation of apoptosis involved in development","type":"related"},{"name":"negative regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"negative regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902338"}


id: GO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrozeatin + NADP+ = H+ + NADPH + zeatin.","definition_xrefs":["EC:1.3.1.69","RHEA:12757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"zeatin reductase activity","secondary_identifiers":["KEGG_REACTION:R05702","MetaCyc:ZEATIN-REDUCTASE-RXN"],"synonyms":[{"name":"dihydrozeatin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050472"}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: PBO:0086711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene","termid":"PBO:0086711"}


id: PBO:0049693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAO2 intronic transcript 1","termid":"PBO:0049693"}


id: PBO:0072936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 16","termid":"PBO:0072936"}


id: GO:0017188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + acetyl-CoA = N-acetyl-L-aspartate + CoA + H+.","definition_xrefs":["RHEA:14165","EC:2.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aspartate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00487","Reactome:R-HSA-8954468","MetaCyc:ASPARTATE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-aspartate N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-aspartate N-acetyltransferase activity","type":"related"},{"name":"aspartate acetyltransferase activity","type":"related"}],"termid":"GO:0017188"}


id: GO:0021949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of a precerebellar neuronal precursor in which a cell move from the rhombic lip, orthogonal to the direction of radial migration and ultimately reside in the brainstem.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}


id: GO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sinus venosus is generated and organized. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinus venosus morphogenesis","termid":"GO:0003236"}


id: PBO:0043991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 1","termid":"PBO:0043991"}


id: PBO:0090845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex WD repeat protein Prp5","termid":"PBO:0090845"}


id: GO:0015690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aluminum (Al) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"aluminum cation transport","synonyms":[{"name":"aluminium ion transport","type":"exact"},{"name":"aluminium transport","type":"exact"},{"name":"aluminum ion transport","type":"related"},{"name":"aluminum transport","type":"exact"}],"termid":"GO:0015690"}


id: GO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"},{"relation_name":"negatively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"down regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"down-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"downregulation of cytokine mediated signaling pathway","type":"exact"},{"name":"inhibition of cytokine mediated signaling pathway","type":"narrow"},{"name":"negative regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"negative regulation of cytokine mediated signalling pathway","type":"exact"}],"termid":"GO:0001960"}


id: PBO:0070013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1310, pseudogene","termid":"PBO:0070013"}


id: PBO:0067672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 853, pseudogene","termid":"PBO:0067672"}


id: GO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoylprotein reduction (obsolete GO:0006132)","synonyms":[{"name":"dihydrolipoylprotein reduction","type":"exact"}],"termid":"GO:0006132"}


id: PBO:0003224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rlp1","termid":"PBO:0003224"}


id: GO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the apical dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical pole of neuron","termid":"GO:0044225"}


id: MOD:00123
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-carboxy-L-lysine.","definition_xrefs":["PubMed:11369851","PubMed:637859","RESID:AA0114","PubMed:4436319","PubMed:7754395","Unimod:299#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carboxy-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(carboxyamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-carbamic hexanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"MOD_RES N6-carboxylysine","type":"exact"},{"name":"N6-carbamyllysine","type":"related"},{"name":"N6-carboxy-L-lysine","type":"exact"},{"name":"N6-carboxylysine","type":"exact"},{"name":"N6CbxLys","type":"exact"},{"name":"lysine NZ-carboxylic acid","type":"exact"}],"termid":"MOD:00123"}


id: PBO:0088887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein,TMEM14 superfamily member Aim19","termid":"PBO:0088887"}


id: PBO:0079805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B26, pseudogene","termid":"PBO:0079805"}


id: PBO:0072926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 7","termid":"PBO:0072926"}


id: PBO:0062990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofurin acidic cluster sorting protein 1","termid":"PBO:0062990"}


id: PBO:0070835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 14","termid":"PBO:0070835"}


id: PBO:0049098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR155 divergent transcript","termid":"PBO:0049098"}


id: GO:0033472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-L-galactose metabolic process","termid":"GO:0033471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"GDP-L-galactose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5115"],"synonyms":[{"name":"GDP-L-galactose anabolism","type":"exact"},{"name":"GDP-L-galactose biosynthesis","type":"exact"},{"name":"GDP-L-galactose formation","type":"exact"},{"name":"GDP-L-galactose synthesis","type":"exact"}],"termid":"GO:0033472"}


id: MOD:01748
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01748"}


id: PBO:0089293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rnf170","termid":"PBO:0089293"}


id: PR:Q7Z9I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C409.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.08","synonyms":[{"name":"Spom972h-SPBC409.08","type":"exact"}],"termid":"PR:Q7Z9I0"}


id: PBO:0091557
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by misassembly of the cosmid","termid":"PBO:0091557"}


id: PBO:0026933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_mitotic_interphase","termid":"PBO:0026933"}


id: PR:O13798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.01","synonyms":[{"name":"Spom972h-cid16","type":"exact"}],"termid":"PR:O13798"}


id: GO:1902241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving copal-8-ol diphosphate(3-).","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) metabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) metabolism","type":"exact"}],"termid":"GO:1902241"}


id: PBO:0068837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 75, pseudogene","termid":"PBO:0068837"}


id: PBO:0047505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 6","termid":"PBO:0047505"}


id: GO:1904752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular associated smooth muscle cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:20693317","GOC:rph","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell migration","termid":"GO:1904738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell migration","synonyms":[{"name":"regulation of vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904752"}


id: PBO:0081597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 3","termid":"PBO:0081597"}


id: PBO:0055662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, muscle differentiation 1","termid":"PBO:0055662"}


id: PBO:0065939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac GTPase activating protein 1 pseudogene 1","termid":"PBO:0065939"}


id: GO:0060879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Creation of the central hole of the semicircular canal by sealing the edges of the pouch that forms during the process of semicircular canal formation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"semicircular canal formation","termid":"GO:0060876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal fusion","termid":"GO:0060879"}


id: PBO:0057582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 887","termid":"PBO:0057582"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: PBO:0039597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANP32A intronic transcript 1","termid":"PBO:0039597"}


id: PBO:0085404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;","termid":"PBO:0085404"}


id: PBO:0080529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 2A","termid":"PBO:0080529"}


id: PBO:0025527
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression of human CDKN1A causes mitotic cell cycle arrest in G2, via interaction with PCNA","termid":"PBO:0025527"}


id: PBO:0052516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 30","termid":"PBO:0052516"}


id: GO:1901873
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-translational protein modification.","definition_xrefs":["GOC:TermGenie","PMID:21209915","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-translational protein modification","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"regulation of PTM","type":"exact"},{"name":"regulation of post-translational amino acid modification","type":"exact"},{"name":"regulation of post-translational modification","type":"exact"},{"name":"regulation of posttranslational amino acid modification","type":"exact"},{"name":"regulation of posttranslational modification","type":"exact"},{"name":"regulation of posttranslational protein modification","type":"exact"}],"termid":"GO:1901873","terms_by_termid":{"GO:0033234":null}}


id: PBO:0060647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 5 like, pseudogene","termid":"PBO:0060647"}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: FYPO:0002909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002909"}


id: PBO:0069208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 463, pseudogene","termid":"PBO:0069208"}


id: GO:0019549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into succinate, that includes the conversion of 4-aminobutyrate to succinate semialdehyde by the pyruvate-dependent gamma aminobutyrate (GABA) transaminase.","definition_xrefs":["MetaCyc:PWY-4321","GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate decarboxylation to succinate","termid":"GO:0006540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glutamate catabolic process to succinate via succinate semialdehyde","synonyms":[{"name":"glutamate breakdown to succinate","type":"broad"},{"name":"glutamate catabolic process to succinate via pyruvate-dependent GABA-transaminase activity","type":"exact"},{"name":"glutamate degradation to succinate","type":"broad"}],"termid":"GO:0019549"}


id: PATO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being extended along a straight line, and is shaped like a reversed lance-point, with the tapering point attached to the leafstalk.","definition_xrefs":["PATOC:PG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblanceolate","termid":"PATO:0002330"}


id: GO:0102895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9(S)-HPODE = colneleate + H2O.","definition_xrefs":["EC:4.2.1.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"colneleate synthase activity","secondary_identifiers":["MetaCyc:RXN-8496","RHEA:28174"],"termid":"GO:0102895"}


id: PBO:0087023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11A; expressed at twice the level of Rpl11Bp; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11A has a paralog, RPL11B, that arose from the whole genome duplication","termid":"PBO:0087023"}


id: GO:1900626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of arugosin biosynthetic process","synonyms":[{"name":"regulation of arugosin anabolism","type":"exact"},{"name":"regulation of arugosin biosynthesis","type":"exact"},{"name":"regulation of arugosin formation","type":"exact"},{"name":"regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900626"}


id: PBO:0052333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1958","termid":"PBO:0052333"}


id: GO:0071815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a intermediate-density lipoprotein particle, a triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intermediate-density lipoprotein particle binding","synonyms":[{"name":"IDL binding","type":"exact"},{"name":"intermediate-density lipoprotein binding","type":"exact"}],"termid":"GO:0071815"}


id: GO:0120032
data:
  {"annotated_genes":["SJAG_03453","SJAG_04509","SJAG_00514","SJAG_01794","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107440,86960,84036,85995,89579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection organization","termid":"GO:0120035"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120032","terms_by_termid":{"GO:1902917":null}}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: GO:1902879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["GOC:mr","PMID:21730158","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902879)","synonyms":[{"name":"down regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"down-regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"downregulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"inhibition of BMP signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of BMP signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"inhibition of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"narrow"},{"name":"negative regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902879"}


