# terms

id: PBO:0016056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuosine salvage protein","termid":"PBO:0016056"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: PBO:0042296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD5 molecule like","termid":"PBO:0042296"}


id: GO:0160110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumens of the A and B tubules of the axonemal microtuble doublet that helps stabilize the doublet microtubule.","definition_xrefs":["GOC:krc","PMID:37295417","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: GO:0050645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + limonin = glucosyl-limonin + UDP.","definition_xrefs":["EC:2.4.1.210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"limonoid glucosyltransferase activity","secondary_identifiers":["RHEA:11256","MetaCyc:2.4.1.210-RXN"],"synonyms":[{"name":"LGTase activity","type":"related"},{"name":"limonoid UDP-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-limonoid glucosyltransferase activity","type":"related"}],"termid":"GO:0050645"}


id: PR:P22192
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pac1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific pac1 ribonuclease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.11c","synonyms":[{"name":"Spom972h-pac1","type":"exact"},{"name":"protein hcs (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P22192"}


id: PBO:0077539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 252","termid":"PBO:0077539"}


id: GO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing acetylcholine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle","type":"exact"}],"termid":"GO:0060200"}


id: PBO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2042","termid":"PBO:0054637"}


id: PBO:0055423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2853","termid":"PBO:0055423"}


id: PR:Q9Y7P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.05c gene.","definition_xrefs":["UniProtKB:Q9Y7P9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.05c","synonyms":[{"name":"Spom972h-SPCC191.05c","type":"exact"}],"termid":"PR:Q9Y7P9"}


id: PBO:0058725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6853","termid":"PBO:0058725"}


id: GO:0005662
data:
  {"annotated_genes":["SJAG_03722","SJAG_01698","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107619,111580,112320],"is_not":false,"summary":null,"term":"GO:0005662"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa.","definition_xrefs":["PMID:9242902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear replisome","termid":"GO:0043601"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_03722":null,"SJAG_03855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DNA replication factor A complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Replication_protein_A"],"synonyms":[{"name":"RPA","type":"exact"},{"name":"replication protein A","type":"exact"}],"termid":"GO:0005662","terms_by_termid":{"GO:0005662":null}}


id: SO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding cysteinyl tRNA (SO:0000258).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine_tRNA_primary_transcript","synonyms":[{"name":"cysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0000215"}


id: GO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the disassembly of R-loops. R-loops are three-stranded nucleic acid structures consisitng of an RNA:DNA heteroduplex and a looped-out non-template strand. Aberrant formation and persistence of R-loops block transcription elongation and cause DNA damage. Mechanisms that resolve R-loops are essential for genome stability.","definition_xrefs":["PMID:28790157","PMID:33986538","PMID:27252122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"R-loop processing","synonyms":[{"name":"R-loop disassembly","type":"exact"}],"termid":"GO:0062176"}


id: GO:1900565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of chanoclavine-I.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I catabolic process (obsolete GO:1900565)","synonyms":[{"name":"chanoclavine-I breakdown","type":"exact"},{"name":"chanoclavine-I catabolism","type":"exact"},{"name":"chanoclavine-I degradation","type":"exact"}],"termid":"GO:1900565"}


id: FYPO:0005909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an RNA molecule is abnormal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PomBase:mah","GO:0031123","PMID:23066505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abnormal RNA 3'-end processing during cellular response to ER stress","type":"exact"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005909"}


id: PBO:0004336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phrenate dehydratase","termid":"PBO:0004336"}


id: PR:Q9USH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWI domain-containing protein C825.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.05c","synonyms":[{"name":"Spom972h-pwi1","type":"exact"}],"termid":"PR:Q9USH5"}


id: GO:0098710
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108621],"is_not":false,"summary":null,"term":"GO:0098710"}]},"cv_name":"biological_process","definition":"The directed movement of guanine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine transmembrane transport","termid":"GO:1903716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"guanine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061489"],"synonyms":[{"name":"guanine import into cell","type":"exact"}],"termid":"GO:0098710","terms_by_termid":{"GO:0098710":null}}


id: PBO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(5)(q35)","termid":"PBO:0047886"}


id: PBO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 2","termid":"PBO:0061914"}


id: PBO:0086271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein whose expression is induced during sporulation; not required for sporulation; heterologous expression in E. coli induces the SOS response that senses DNA damage","termid":"PBO:0086271"}


id: SO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Lysidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysidine","secondary_identifiers":["http://en.wikipedia.org/wiki/Lysidine","RNAMOD:028"],"synonyms":[{"name":"k2C","type":"exact"}],"termid":"SO:0001289"}


id: GO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A SWI/SNF-type complex that directly interacts with the vitamin D receptor (VDR) through the Williams syndrome transcription factor (WSTF), and mediates the recruitment of unliganded VDR to VDR target sites in promoters. The WINAC complex contains at least 13 subunits, including WSTF, several SWI/SNF components, and DNA replication-related factors.","definition_xrefs":["GOC:BHF","PMID:12837248"],"gene_count":0,"genotype_count":0,"name":"obsolete WINAC complex (obsolete GO:0071778)","synonyms":[{"name":"WINAC complex","type":"exact"}],"termid":"GO:0071778"}


id: PBO:0077720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 1","termid":"PBO:0077720"}


id: PR:P0CY14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat3-Mm gene.","definition_xrefs":["UniProtKB:P0CY14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced mating-type M-specific polypeptide Mi (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.01c","synonyms":[{"name":"Spom972h-mat3-Mm","type":"exact"}],"termid":"PR:P0CY14"}


id: PBO:0048991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 3","termid":"PBO:0048991"}


id: GO:0021689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar molecular layer. This process pertains to the physical shaping of a rudimentary structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer structural organization","synonyms":[{"name":"cerebellar molecular layer structural organisation","type":"exact"}],"termid":"GO:0021689"}


id: FYPO:0007194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondria present in increased numbers","synonyms":[{"name":"extra mitochondria during vegetative growth","type":"exact"},{"name":"increased number of mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0007194"}


id: PBO:0073655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIM bHLH transcription factor 2","termid":"PBO:0073655"}


id: PBO:0005450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Bub1","termid":"PBO:0005450"}


id: PBO:0078480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 4-1","termid":"PBO:0078480"}


id: PBO:0065638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 13","termid":"PBO:0065638"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["GOC:dh","PMID:17204561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: PBO:0049754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma associated transcript 5","termid":"PBO:0049754"}


id: GO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a juxtaglomerulus cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell fate commitment","termid":"GO:0072150"}


id: GO:1990889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H4 in which the lysine residue at position 20 has been modified by trimethylation.","definition_xrefs":["PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"H4K20me3 modified histone binding","termid":"GO:1990889"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: PBO:0004674
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gyrate atrophy of choroid and retina","termid":"PBO:0004674"}


id: PBO:0088990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Pop3/Wat1/Lst8","termid":"PBO:0088990"}


id: SO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a ribosomal RNA (rRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_encoding","synonyms":[{"name":"rRNA encoding","type":"exact"}],"termid":"SO:0000573"}


id: PBO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.5","termid":"PBO:0003277"}


id: GO:0015400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of ammonium from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete low-affinity secondary active ammonium transmembrane transporter activity (obsolete GO:0015400)","synonyms":[{"name":"low affinity ammonium transmembrane transporter activity","type":"related"},{"name":"low affinity secondary active ammonium transmembrane transporter activity","type":"exact"}],"termid":"GO:0015400"}


id: GO:0032815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell activation","termid":"GO:0032814"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"negatively_regulates","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell activation","synonyms":[{"name":"down regulation of natural killer cell activation","type":"exact"},{"name":"down-regulation of natural killer cell activation","type":"exact"},{"name":"downregulation of natural killer cell activation","type":"exact"},{"name":"inhibition of natural killer cell activation","type":"narrow"},{"name":"negative regulation of NK cell activation","type":"exact"}],"termid":"GO:0032815"}


id: PBO:0068895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 137, pseudogene","termid":"PBO:0068895"}


id: PBO:0065708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase 7 pseudogene 1","termid":"PBO:0065708"}


id: GO:0018874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"benzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:benz2","MetaCyc:P321-PWY"],"synonyms":[{"name":"benzoate metabolism","type":"exact"}],"termid":"GO:0018874"}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: GO:0048308
data:
  {"annotated_genes":["SJAG_02848","SJAG_02683","SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048309"},{"annotations":[98860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000001"},{"annotations":[102764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The partitioning of organelles between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02683":null,"SJAG_02848":null,"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organelle inheritance","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048308","terms_by_termid":{"GO:0000001":null,"GO:0045033":null,"GO:0048309":null}}


id: PBO:0043398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 1","termid":"PBO:0043398"}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: PBO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 3","termid":"PBO:0000089"}


id: PBO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nemaline Myopathy","termid":"PBO:0017924"}


id: GO:0031770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone-releasing hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"growth hormone-releasing hormone receptor binding","synonyms":[{"name":"growth hormone-releasing hormone receptor ligand","type":"narrow"}],"termid":"GO:0031770"}


id: GO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arginine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity L-arginine transmembrane transporter activity","synonyms":[{"name":"high affinity arginine transmembrane transporter activity","type":"exact"},{"name":"high-affinity arginine transmembrane transporter activity","type":"exact"},{"name":"high-affinity arginine transporter activity","type":"broad"}],"termid":"GO:0005289"}


id: PBO:0075707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP2 antisense RNA 1","termid":"PBO:0075707"}


id: GO:1904085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of epiboly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of epiboly (obsolete GO:1904085)","synonyms":[{"name":"activation of epiboly","type":"narrow"},{"name":"positive regulation of epiboly","type":"exact"},{"name":"up regulation of epiboly","type":"exact"},{"name":"up-regulation of epiboly","type":"exact"},{"name":"upregulation of epiboly","type":"exact"}],"termid":"GO:1904085"}


id: MOD:00376
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphoadenosine through a phosphoramide ester bond to form 1'-(phospho-5'-adenosine)-L-histidine.","definition_xrefs":["PubMed:15182206","PubMed:9323207","RESID:AA0371","Unimod:405#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-adenosine)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-[1-(5'-adenosine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-adenosine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-AMP-histidine intermediate","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-histidine 5'-adenosine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"N(tau)-5'-adenylic-L-histidine","type":"exact"},{"name":"N1'-adenylylated histidine","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"tele-5'-adenylic-L-histidine","type":"exact"}],"termid":"MOD:00376"}


id: SO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-translated 93 nt antisense RNA that binds its target ompF mRNA and regulates ompF expression by inhibiting translation and inducing degradation of the message.","direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicF_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MicF_RNA"],"synonyms":[{"name":"MicF RNA","type":"exact"}],"termid":"SO:0000383"}


id: PBO:0039208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B10 pseudogene 2","termid":"PBO:0039208"}


id: PBO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2493","termid":"PBO:0055076"}


id: PR:Q9P7B5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC521.02 gene.","definition_xrefs":["UniProtKB:Q9P7B5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent metalloprotease WSS1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.02","synonyms":[{"name":"DNA damage response protein WSS1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC521.02","type":"exact"}],"termid":"PR:Q9P7B5"}


id: PBO:0061105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family CARD domain containing 3","termid":"PBO:0061105"}


id: GO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-carboxy-4'-sulfoazobenzene, a sulfonated azo compound synthesized by nitro-amine condensation from sulfanilic acid and 4-nitrobenzoic acid.","definition_xrefs":["PMID:9603860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"4-carboxy-4'-sulfoazobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:csab"],"synonyms":[{"name":"4-carboxy-4'-sulfoazobenzene metabolism","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolic process","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolism","type":"exact"}],"termid":"GO:0018887"}


id: GO:1900458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of brassinosteroid mediated signaling pathway","termid":"GO:1900457"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"down regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"down-regulation of brassinosteroid mediated signalling","type":"exact"},{"name":"downregulation of brassinosteroid mediated signaling pathway","type":"exact"},{"name":"downregulation of brassinosteroid mediated signalling","type":"exact"},{"name":"inhibition of brassinosteroid mediated signaling pathway","type":"narrow"},{"name":"inhibition of brassinosteroid mediated signalling","type":"exact"},{"name":"negative regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900458"}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: MOD:01358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["PubMed:15602776","Unimod:687#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site N-term","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01358"}


id: PBO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 2","termid":"PBO:0061473"}


id: PBO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_at","termid":"PBO:0011411"}


id: PBO:0048384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating Rap/RanGAP domain like 3","termid":"PBO:0048384"}


id: GO:0160073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Casparian strip, a region of plant cell wall specialised to act as a seal to prevent back leakage of secreted material.","definition_xrefs":["PMID:28104889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Casparian strip assembly","synonyms":[{"name":"Casparian strip formation","type":"exact"}],"termid":"GO:0160073"}


id: PBO:0068833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 71, pseudogene","termid":"PBO:0068833"}


id: GO:0006678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramide metabolic process","termid":"GO:0006677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucosylceramide metabolic process","synonyms":[{"name":"glucosylceramide metabolism","type":"exact"}],"termid":"GO:0006678"}


id: MOD:00176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["PubMed:10924139","PubMed:11052675","PubMed:180526","PubMed:368065","RESID:AA0167","Unimod:395#S","PubMed:179809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","synonyms":[{"name":"MOD_RES O-(phosphoribosyl dephospho-coenzyme A)serine","type":"exact"},{"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-(phosphate-5-ribosyl-alpha-2-adenosine-5-diphosphate pantetheine)-L-serine","type":"exact"},{"name":"O3-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-2'-(5''-phosphoribosyl-3'-dephosphocoenzyme A)-L-serine","type":"exact"},{"name":"OPRibdPCoASer","type":"exact"},{"name":"PhosphoribosyldephosphoCoA","type":"related"},{"name":"phosphoribosyl dephospho-coenzyme A","type":"related"}],"termid":"MOD:00176"}


id: PBO:0005293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L20 (predicted)","termid":"PBO:0005293"}


id: PBO:0038774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein T2","termid":"PBO:0038774"}


id: PBO:0068352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 130","termid":"PBO:0068352"}


id: PBO:0050406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 8","termid":"PBO:0050406"}


id: GO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exit of a fully formed virion particles from the host cell by exocytosis via a host vesicle.","definition_xrefs":["PMID:33157038","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral exocytosis","synonyms":[{"name":"viral egress by exocytosis","type":"exact"}],"termid":"GO:0046754"}


id: PATO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000611 absolute orientation value (obsolete PATO:0000611)","termid":"PATO:0000611"}


id: PBO:0060199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUC20 overlapping transcript","termid":"PBO:0060199"}


id: PBO:0041858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4 like, pseudogene","termid":"PBO:0041858"}


id: PBO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 43","termid":"PBO:0060096"}


id: PR:O94701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fic1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ingression protein fic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.18c","synonyms":[{"name":"Spom972h-fic1","type":"exact"},{"name":"cdc15-interacting C2 domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94701"}


id: GO:0004176
data:
  {"annotated_genes":["SJAG_00984","SJAG_01179","SJAG_01816"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89369,107074,114777],"is_not":false,"summary":null,"term":"GO:0004176"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent peptidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0004280","Reactome:R-HSA-9698929","Reactome:R-HSA-9839105","Reactome:R-HSA-9839751","Reactome:R-HSA-9839113","Reactome:R-HSA-9838081","Reactome:R-HSA-9838289","Reactome:R-HSA-9838004","Reactome:R-HSA-9839146","Reactome:R-HSA-9839059"],"synonyms":[{"name":"ATP-dependent proteolysis","type":"related"}],"termid":"GO:0004176","terms_by_termid":{"GO:0004176":null}}


id: GO:0035308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process the stops, prevents, or reduces the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein dephosphorylation","termid":"GO:0035304"},{"relation_name":"is_a","term_name":"negative regulation of dephosphorylation","termid":"GO:0035305"},{"relation_name":"negatively_regulates","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein dephosphorylation","synonyms":[{"name":"down regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"downregulation of protein amino acid dephosphorylation","type":"exact"},{"name":"inhibition of protein amino acid dephosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035308"}


id: PBO:0005323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ada2","termid":"PBO:0005323"}


id: PBO:0045754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECE1 antisense RNA 1","termid":"PBO:0045754"}


id: PBO:0088834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly NADPH-ferredoxin reductase Arh1","termid":"PBO:0088834"}


id: GO:1900525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:8056324","GOC:TermGenie","PMID:8614637"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900525)","synonyms":[{"name":"activation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900525"}


id: PBO:0040558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 1","termid":"PBO:0040558"}


id: PATO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling or containing flesh.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/fleshy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fleshy","termid":"PATO:0002351"}


id: PBO:0034581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule","termid":"PBO:0034581"}


id: PBO:0057871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-4","termid":"PBO:0057871"}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: GO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Ligand dependent interaction with the thyroid hormone receptor.","definition_xrefs":["PMID:7776974"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand-dependent thyroid hormone receptor interactor activity (obsolete GO:0016923)","synonyms":[{"name":"TRIP4","type":"related"},{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"exact"}],"termid":"GO:0016923"}


id: PBO:0085447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA","termid":"PBO:0085447"}


id: PBO:0085031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase regulatory subunit of the 26S proteasome; similar to putative proteasomal subunits in other species; null mutant is temperature sensitive and exhibits cell cycle and proteasome assembly defects; protein abundance increases in response to DNA replication stress; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085031"}


id: PR:C6Y4A2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.22","synonyms":[{"name":"Spom972h-SPAC4G9.22","type":"exact"}],"termid":"PR:C6Y4A2"}


id: PBO:0025483
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metachromatic leukodystrophy","termid":"PBO:0025483"}


id: PBO:0091142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial alpha-ketoglutarate dehydrogenase Ymr1 (predicted)","termid":"PBO:0091142"}


id: GO:0086060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086060"}


id: GO:1901110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving actinorhodin.","definition_xrefs":["UniPathway:UPA00173","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"actinorhodin metabolic process","synonyms":[{"name":"actinorhodin metabolism","type":"exact"}],"termid":"GO:1901110"}


id: SO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_part","synonyms":[{"name":"chromosomal region","type":"exact"},{"name":"chromosomal_region","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"SO:0000830"}


id: PBO:0075884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 2","termid":"PBO:0075884"}


id: GO:0047239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile + UDP-D-glucose = H+ + taxiphyllin + UDP.","definition_xrefs":["RHEA:15961","EC:2.4.1.178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxymandelonitrile glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02709","MetaCyc:2.4.1.178-RXN"],"synonyms":[{"name":"UDP-glucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"UDPglucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"cyanohydrin glucosyltransferase activity","type":"related"}],"termid":"GO:0047239"}


id: GO:0047714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-3-O-(beta-D-galactosyl)-sn-glycerol + 2 H2O = 3-beta-D-galactosyl-sn-glycerol + 2 a fatty acid + 2 H+.","definition_xrefs":["RHEA:13189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"galactolipase activity","secondary_identifiers":["MetaCyc:GALACTOLIPASE-RXN","EC:3.1.1.26"],"synonyms":[{"name":"1,2-diacyl-3-beta-D-galactosyl-sn-glycerol acylhydrolase activity","type":"related"},{"name":"galactolipid acylhydrolase activity","type":"related"},{"name":"galactolipid lipase activity","type":"related"},{"name":"polygalactolipase activity","type":"related"}],"termid":"GO:0047714"}


id: PBO:0065003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM8 antisense RNA 1","termid":"PBO:0065003"}


id: GO:2000550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte chemotaxis","termid":"GO:1901624"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"negatively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell chemotaxis","termid":"GO:2000550"}


id: GO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y1 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"P2Y1 nucleotide receptor binding","synonyms":[{"name":"P2Y1 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031812"}


id: GO:0018234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The thioether cross-linking of a cysteine residue to a tyrosine residue to form 3'-(S-L-cysteinyl)-L-tyrosine, found in galactose oxidase.","definition_xrefs":["RESID:AA0113"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(S-L-cysteinyl)-L-tyrosine (obsolete GO:0018234)","termid":"GO:0018234"}


id: FYPO:0007095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is increased.","definition_xrefs":["PomBase:mah","PMID:31495586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to actin fusion focus","synonyms":[{"name":"increased protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007095"}


id: PBO:0038470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 9","termid":"PBO:0038470"}


id: PBO:0057264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 489","termid":"PBO:0057264"}


id: PBO:0048869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA4 antisense RNA 1","termid":"PBO:0048869"}


id: MOD:02007
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoleyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-palmitoleylated residue","termid":"MOD:02008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoleyl-L-lysine","termid":"MOD:02007"}


id: PBO:0028965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028965"}


id: GO:0009444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the conversion of pyruvate to acetylphosphate.","definition_xrefs":["MetaCyc:PYRUVOX-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete pyruvate oxidation (obsolete GO:0009444)","secondary_identifiers":["Wikipedia:Pyruvate_decarboxylation"],"termid":"GO:0009444"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: GO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine production","secondary_identifiers":["GO:0050715","GO:0042108"],"synonyms":[{"name":"activation of cytokine production","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process","type":"narrow"},{"name":"positive regulation of cytokine secretion","type":"narrow"},{"name":"stimulation of cytokine production","type":"narrow"},{"name":"up regulation of cytokine production","type":"exact"},{"name":"up-regulation of cytokine production","type":"exact"},{"name":"upregulation of cytokine production","type":"exact"}],"termid":"GO:0001819"}


id: PBO:0077253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 4","termid":"PBO:0077253"}


id: GO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of development, heterochronic","termid":"GO:0045962"},{"relation_name":"is_a","term_name":"positive regulation of nematode larval development","termid":"GO:0061063"},{"relation_name":"is_a","term_name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development, heterochronic","termid":"GO:0090445"}


id: GO:0072675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The plasma membrane fusion process that results in fusion of mononuclear osteoclasts to form a multinuclear osteoclast.","definition_xrefs":["CL:0000092","GOC:BHF","CL:0000779","GOC:mah","PMID:12713016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"},{"relation_name":"part_of","term_name":"multinuclear osteoclast differentiation","termid":"GO:0072674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast fusion","termid":"GO:0072675"}


id: PBO:0054234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1616","termid":"PBO:0054234"}


id: GO:0097524
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane that is part of a sperm cell.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"sperm plasma membrane","termid":"GO:0097524"}


id: PBO:0082213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 2 subunit of the 20S proteasome","termid":"PBO:0082213"}


id: GO:0003747
data:
  {"annotated_genes":["SJAG_05221","SJAG_00338","SJAG_02601","SJAG_01518","SJAG_01696","SJAG_00308","SJAG_04283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87203,92044,94751,98165,103257,112104,113556],"is_not":false,"summary":null,"term":"GO:0003747"},{"annotations":[94752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[87204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Involved in catalyzing the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation termination factor activity","termid":"GO:0008079"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02601":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"translation release factor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0003749","GO:0003748"],"termid":"GO:0003747","terms_by_termid":{"GO:0003747":null,"GO:0016149":null,"GO:0016150":null}}


id: PBO:0030118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_zinc_ion","termid":"PBO:0030118"}


id: GO:0102730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cathasterone + O2 + a reduced electron acceptor = teasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cathasterone hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-716"],"termid":"GO:0102730"}


id: FYPO:0004628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication","synonyms":[{"name":"delayed premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0004628"}


id: GO:1900289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"negatively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"down regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"down-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"down-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"downregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"downregulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"inhibition of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"inhibition of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"negative regulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900289"}


id: GO:0061598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction ATP + molybdopterin = diphosphate + adenylyl-molybdopterin.","definition_xrefs":["EC:2.7.7.75","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase activity","secondary_identifiers":["RHEA:31331"],"termid":"GO:0061598"}


id: PBO:0090473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II, and III complex subunit Trs23","termid":"PBO:0090473"}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: PBO:0042409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20 pseudogene 1","termid":"PBO:0042409"}


id: PBO:0079376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 11","termid":"PBO:0079376"}


id: PBO:0054215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1595","termid":"PBO:0054215"}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 1","termid":"PBO:0050020"}


id: PBO:0079320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 10","termid":"PBO:0079320"}


id: PR:Q10317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.05","synonyms":[{"name":"Spom972h-med20","type":"exact"},{"name":"mediator complex subunit 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10317"}


id: PBO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 1","termid":"PBO:0070999"}


id: GO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a germline cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"germline cell cycle switching, mitotic to meiotic cell cycle","synonyms":[{"name":"germline cell cycle switching, mitosis to meiosis","type":"narrow"},{"name":"germline conversion to meiosis","type":"narrow"},{"name":"germline conversion to meiotic cell cycle","type":"exact"},{"name":"germline entry into meiosis","type":"narrow"},{"name":"germline entry into meiotic cell cycle","type":"exact"},{"name":"germline initiation of meiosis","type":"narrow"},{"name":"germline initiation of meiotic cell cycle","type":"exact"},{"name":"germline meiotic entry","type":"narrow"}],"termid":"GO:0051729"}


id: PBO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1","termid":"PBO:0060390"}


id: GO:0102711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A25 + 2-oxoglutarate + O2 = gibberellin A13 + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin A25,oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6541"],"termid":"GO:0102711"}


id: GO:0050934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a late stripe melanocyte (LSM). In zebrafish, LSMs develop during the second phase (3-4 weeks of development) of the larva-to-adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late stripe melanocyte differentiation","synonyms":[{"name":"late stripe melanocyte cell differentiation","type":"exact"},{"name":"late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050934"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: GO:0003871
data:
  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96766],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["EC:2.1.1.14","RHEA:21196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04405","MetaCyc:HOMOCYSMET-RXN"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: SO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in mitochondrial sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Mitochondrial_gene"],"synonyms":[{"name":"mitochondrial gene","type":"exact"},{"name":"mt gene","type":"exact"}],"termid":"SO:0000088"}


id: GO:0010266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin B1 stimulus.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin B1","synonyms":[{"name":"response to thiamin","type":"exact"},{"name":"response to thiamine","type":"exact"}],"termid":"GO:0010266"}


id: GO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host translation (obsolete GO:0044074)","synonyms":[{"name":"negative regulation of host translation by symbiont","type":"exact"}],"termid":"GO:0044074"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","PMID:18790874","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: PBO:0013834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2 histone acetytransferase acytyltransferase complex subunit","termid":"PBO:0013834"}


id: GO:0062062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an oligosaccharyltransferase complex.","definition_xrefs":["PMID:12887896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oligosaccharyltransferase complex binding","termid":"GO:0062062"}


id: PBO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_phenotype","termid":"PBO:0031423"}


id: PBO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.98","termid":"PBO:0005761"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: SO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a transfer RNA (tRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_encoding","synonyms":[{"name":"tRNA encoding","type":"exact"}],"termid":"SO:0000663"}


id: PBO:0052515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 29","termid":"PBO:0052515"}


id: PBO:0031757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere","termid":"PBO:0031757"}


id: GO:1990617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF4 (activating transcription factor 4, also known as cAMP response element binding protein-2/CREB-2) subunits.","definition_xrefs":["PMID:18940792","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"CHOP-ATF4 complex","synonyms":[{"name":"ATF4-CHOP heterodimer","type":"exact"},{"name":"CHOP-ATF4 heterodimer","type":"exact"},{"name":"CHOP-CREB-2 complex","type":"exact"},{"name":"CHOP/ATF4 complex","type":"exact"},{"name":"GADD153-ATF4 complex","type":"exact"}],"termid":"GO:1990617"}


id: PBO:0049772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 11","termid":"PBO:0049772"}


id: PBO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucan synthase Ags1","termid":"PBO:0015268"}


id: PBO:0077079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 2","termid":"PBO:0077079"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00509","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0046578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 20","termid":"PBO:0046578"}


id: MOD:01738
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01738"}


id: GO:0019651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of citrate to diacetyl, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P126-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate metabolic process","termid":"GO:0006101"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"citrate catabolic process to diacetyl","synonyms":[{"name":"citrate fermentation to diacetyl","type":"exact"},{"name":"diacetyl fermentation","type":"exact"}],"termid":"GO:0019651"}


id: PBO:0079387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2B class IIb pseudogene 1","termid":"PBO:0079387"}


id: GO:0015797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mannitol across a membrane. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mannitol transmembrane transport","synonyms":[{"name":"mannitol transport","type":"broad"}],"termid":"GO:0015797"}


id: PATO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000748 discrimination value (obsolete PATO:0000748)","termid":"PATO:0000748"}


id: PBO:0054049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1391","termid":"PBO:0054049"}


id: PBO:0073117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 5","termid":"PBO:0073117"}


id: GO:0034736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + cholesterol = a cholesterol ester + CoA.","definition_xrefs":["RHEA:17729","EC:2.3.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"cholesterol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01461","Reactome:R-HSA-8876696","MetaCyc:STEROL-O-ACYLTRANSFERASE-RXN"],"synonyms":[{"name":"ACAT activity","type":"broad"},{"name":"acyl coenzyme A-cholesterol-O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:cholesterol O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:cholesterol acyltransferase activity","type":"related"},{"name":"acylcoenzyme A:cholesterol O-acyltransferase activity","type":"exact"},{"name":"cholesterol acyltransferase activity","type":"broad"},{"name":"cholesterol ester synthetase activity","type":"related"},{"name":"cholesteryl ester synthetase activity","type":"related"}],"termid":"GO:0034736"}


id: GO:1901787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"benzoyl-CoA metabolic process","synonyms":[{"name":"benzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901787"}


id: GO:0035228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"},{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate-cysteine ligase activity","synonyms":[{"name":"down regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"down-regulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"downregulation of glutamate-cysteine ligase activity","type":"exact"},{"name":"inhibition of glutamate-cysteine ligase activity","type":"narrow"}],"termid":"GO:0035228"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: GO:0009528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the plastid envelope; also faces the plastid stroma.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid inner membrane","termid":"GO:0009528"}


id: GO:0010233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within the phloem during long distance transport between source and sink tissues.","definition_xrefs":["PMID:19025382","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"phloem transport","termid":"GO:0010233"}


id: PBO:0072603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L1 domain containing 1","termid":"PBO:0072603"}


id: PBO:0054570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1972","termid":"PBO:0054570"}


id: GO:0016262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + protein = UDP + 4-N-(N-acetyl-D-glucosaminyl)-protein.","definition_xrefs":["EC:2.4.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.94-RXN","RHEA:16533","GO:0016253"],"synonyms":[{"name":"N-GlcNAc transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:protein beta-N-acetyl-D-glucosaminyl-transferase activity","type":"exact"},{"name":"UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"protein N-GlcNAc transferase activity","type":"exact"},{"name":"uridine diphospho-N-acetylglucosamine:polypeptide beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-protein acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0016262"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["RHEA:52856","EC:1.5.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01565","MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN","Reactome:R-HSA-6797653"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: GO:1901973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to proline.","definition_xrefs":["PMID:7730362","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"proline binding","termid":"GO:1901973"}


id: PBO:0027325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027325"}


id: PBO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6 (predicted)","termid":"PBO:0000484"}


id: PR:P21911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11921:SF7","OMA:SCHPO00778","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.01","secondary_identifiers":["UniProtKB:P21911"],"synonyms":[{"name":"Ip (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SDHB","type":"exact"},{"name":"iron-sulfur subunit of complex II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21911"}


id: GO:0006267
data:
  {"annotated_genes":["SJAG_02607","SJAG_00247","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99420,106639,111087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the nuclear pre-replicative complex, a protein-DNA complex that forms at the eukaryotic DNA replication origin and is required for replication initiation.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0006260","GO:0006259","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly","type":"exact"},{"name":"pre-RC complex assembly","type":"broad"},{"name":"pre-replicative complex assembly","type":"broad"},{"name":"pre-replicative complex formation","type":"broad"}],"termid":"GO:0006267","terms_by_termid":{"GO:1902985":null}}


id: PBO:0087430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase; electrogenic proton pump found throughout the endomembrane system; contains nucleotide binding sites; also detected in the cytoplasm; protein abundance increases in response to DNA replication stress; human homolog ATP6V1B1, implicated in autosomal-recessive distal renal tubular acidosis (RTA) with sensorineural deafness, complements yeast null mutant","termid":"PBO:0087430"}


id: PR:G2TRP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox20 gene.","definition_xrefs":["UniProtKB:G2TRP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase protein 20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.18","synonyms":[{"name":"Spom972h-cox20","type":"exact"}],"termid":"PR:G2TRP9"}


id: PBO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by MBF complex","termid":"PBO:0001302"}


id: GO:1902146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"positively_regulates","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to cell cycle checkpoint signaling","synonyms":[{"name":"activation of G1/S transition checkpoint effector process","type":"related"},{"name":"activation of G2/M transition checkpoint effector process","type":"related"},{"name":"activation of cell cycle checkpoint effector process","type":"exact"},{"name":"activation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"activation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"activation of response to cell cycle checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"activation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"activation of response to signal involved in cell cycle checkpoint","type":"exact"},{"name":"positive regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"positive regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"positive regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"positive regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"positive regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"positive regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"positive regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"positive regulation of response to signal involved in cell cycle checkpoint","type":"exact"},{"name":"up regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"up regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"up regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"up regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"up regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"up regulation of response to cell cycle checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"up regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"up regulation of response to signal involved in cell cycle checkpoint","type":"exact"},{"name":"up-regulation of G1/S transition checkpoint effector process","type":"related"},{"name":"up-regulation of G2/M transition checkpoint effector process","type":"related"},{"name":"up-regulation of cell cycle checkpoint effector process","type":"exact"},{"name":"up-regulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"up-regulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"up-regulation of response to cell cycle checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"up-regulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"up-regulation of response to signal involved in cell cycle checkpoint","type":"exact"},{"name":"upregulation of G1/S transition checkpoint effector process","type":"related"},{"name":"upregulation of G2/M transition checkpoint effector process","type":"related"},{"name":"upregulation of cell cycle checkpoint effector process","type":"exact"},{"name":"upregulation of response to G1/S transition checkpoint signaling","type":"related"},{"name":"upregulation of response to G2/M transition checkpoint signaling","type":"related"},{"name":"upregulation of response to cell cycle checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"upregulation of response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"upregulation of response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:1902146"}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: GO:0005652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear periphery","termid":"GO:0034399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0034399"}],"interesting_parent_ids":["GO:0034399","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear lamina","secondary_identifiers":["NIF_Subcellular:sao1455996588","Wikipedia:Nuclear_lamina"],"termid":"GO:0005652"}


id: GO:1903447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of geraniol.","definition_xrefs":["GOC:di","GO_REF:0000068","GOC:TermGenie","PMID:23200656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"geraniol catabolic process","synonyms":[{"name":"geraniol breakdown","type":"exact"},{"name":"geraniol catabolism","type":"exact"},{"name":"geraniol degradation","type":"exact"}],"termid":"GO:1903447"}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:21317872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: PBO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1B","termid":"PBO:0047601"}


id: GO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffusely banded region of heterochromatin located between euchromatin and alpha-heterochromatin in the polytene chromosome chromocenter; normally replicated during polytenization.","definition_xrefs":["PMID:8878678","PMID:11404334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"beta-heterochromatin","termid":"GO:0005722"}


id: GO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line nerve over time, form its formation to the mature structure. Lateral line nerves project primarily to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve development","synonyms":[{"name":"nLL development","type":"exact"}],"termid":"GO:0048892"}


id: PBO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_induced_by","termid":"PBO:0034361"}


id: FYPO:0006360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a greater extent than normal in regions of pericentric heterochromatin.","definition_xrefs":["GO:0005721","PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"increased protein exchange at pericentric heterochromatin","synonyms":[{"name":"increased protein exchange at centromeric heterochromatin","type":"exact"},{"name":"increased protein exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased protein exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"increased protein motility on centromeric heterochromatin","type":"exact"}],"termid":"FYPO:0006360"}


id: GO:0046362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribitol metabolic process","termid":"GO:0019349"},{"relation_name":"is_a","term_name":"pentitol biosynthetic process","termid":"GO:0019526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"ribitol biosynthetic process","synonyms":[{"name":"ribitol anabolism","type":"exact"},{"name":"ribitol biosynthesis","type":"exact"},{"name":"ribitol formation","type":"exact"},{"name":"ribitol synthesis","type":"exact"}],"termid":"GO:0046362"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxypseudooxynicotine hydrolase activity (obsolete GO:0034948)","termid":"GO:0034948"}


id: PBO:0076352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 16","termid":"PBO:0076352"}


id: PBO:0057128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 211","termid":"PBO:0057128"}


id: GO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a chloride channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"chloride channel regulator activity","secondary_identifiers":["Reactome:R-HSA-383190"],"termid":"GO:0017081"}


id: GO:0060099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"}


id: PBO:0048138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 2","termid":"PBO:0048138"}


id: PBO:0017974
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HIS3","termid":"PBO:0017974"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0050185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 2","termid":"PBO:0050185"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: PBO:0056209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B4","termid":"PBO:0056209"}


id: GO:2000036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell population maintenance","synonyms":[{"name":"regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:2000036"}


id: PBO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5","termid":"PBO:0090250"}


id: PBO:0088174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylose and arabinose reductase; member of the aldo-keto reductase (AKR) family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0088174"}


id: GO:0008064
data:
  {"annotated_genes":["SJAG_01993","SJAG_04982","SJAG_03086","SJAG_04100","SJAG_00521","SJAG_02700","SJAG_02566","SJAG_01894","SJAG_00279","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110389,84398,94993,88423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[86794,98834,85955,101242,97845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[93829,110392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament length","termid":"GO:0030832"},{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"regulation of actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008064","terms_by_termid":{"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0075760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 1 pseudogene 2","termid":"PBO:0075760"}


id: PBO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein that suppresses calcineurin deletion Rnc1","termid":"PBO:0004993"}


id: PR:Q9Y7X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C365.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.16","synonyms":[{"name":"Spom972h-SPBC365.16","type":"exact"}],"termid":"PR:Q9Y7X4"}


id: GO:0071167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex import into nucleus (obsolete GO:0071167)","synonyms":[{"name":"RNP import into nucleus","type":"exact"},{"name":"ribonucleoprotein complex import into cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus import","type":"exact"},{"name":"ribonucleoprotein complex targeting to nucleus","type":"exact"},{"name":"ribonucleoprotein complex transport from cytoplasm to nucleus","type":"exact"},{"name":"ribonucleoprotein import into nucleus","type":"exact"}],"termid":"GO:0071167"}


id: PBO:0081316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 100","termid":"PBO:0081316"}


id: GO:0015770
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sucrose transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015770","terms_by_termid":{"GO:0106082":null}}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: GO:1902332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA duplex unwinding that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication DNA unwinding","termid":"GO:1902297"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"bacterial-type DNA replication DNA duplex unwinding","synonyms":[{"name":"DNA duplex unwinding involved in bacterial-type DNA replication","type":"exact"},{"name":"DNA unwinding involved in bacterial-type DNA replication","type":"exact"},{"name":"duplex DNA melting involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902332"}


id: GO:0047963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate.","definition_xrefs":["EC:2.3.1.65","MetaCyc:GLYCINE-N-CHOLOYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycine N-choloyltransferase activity","secondary_identifiers":["RHEA:14001"],"synonyms":[{"name":"BACAT activity","type":"related"},{"name":"BAT activity","type":"related"},{"name":"amino acid N-choloyltransferase activity","type":"related"},{"name":"bile acid-CoA:amino acid N-acyltransferase activity","type":"related"},{"name":"choloyl-CoA:glycine N-choloyltransferase activity","type":"related"},{"name":"cholyl-CoA glycine-taurine N-acyltransferase activity","type":"related"},{"name":"cholyl-CoA:taurine N-acyltransferase activity","type":"related"},{"name":"glycine--taurine N-acyltransferase activity","type":"related"}],"termid":"GO:0047963"}


id: PBO:0081565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 490","termid":"PBO:0081565"}


id: PBO:0029318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_subtelomere_during_mitotic_S_phase","termid":"PBO:0029318"}


id: PBO:0077456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 6","termid":"PBO:0077456"}


id: PBO:0078544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 36","termid":"PBO:0078544"}


id: PBO:0069922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1214, pseudogene","termid":"PBO:0069922"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_00236","SJAG_01799","SJAG_00661","SJAG_03637","SJAG_00596","SJAG_04461","SJAG_00845","SJAG_00333","SJAG_03581","SJAG_02022"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87244,90689,91769,96274,100620,101436,109131,114827],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[101433,89844,96271,99800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:2000100":null,"GO:2000247":null}}


id: PBO:0053221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich glioma inactivated 1","termid":"PBO:0053221"}


id: GO:1903171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of carbon dioxide within an organism or cell.","definition_xrefs":["GOC:mr","GO_REF:0000072","PMID:16571594","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon dioxide homeostasis (obsolete GO:1903171)","termid":"GO:1903171"}


id: PBO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 7","termid":"PBO:0070854"}


id: PATO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000549 far red light sensitivity value (obsolete PATO:0000549)","termid":"PATO:0000549"}


id: GO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of uptake of cholesterol into the blood by absorption from the intestine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"},{"relation_name":"is_a","term_name":"positive regulation of intestinal lipid absorption","termid":"GO:1904731"},{"relation_name":"positively_regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal cholesterol absorption","synonyms":[{"name":"activation of cholesterol absorption","type":"narrow"},{"name":"stimulation of cholesterol absorption","type":"narrow"},{"name":"up regulation of cholesterol absorption","type":"exact"},{"name":"up-regulation of cholesterol absorption","type":"exact"},{"name":"upregulation of cholesterol absorption","type":"exact"}],"termid":"GO:0045797"}


id: SO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pi helix has 4.1 residues per turn and a translation of 1.15 (=0.115 nm) along the helical axis. The N-H group of an amino acid forms a hydrogen bond with the C=O group of the amino acid five residues earlier.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"right_handed_peptide_helix","termid":"SO:0001116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"pi_helix","secondary_identifiers":["http://en.wikipedia.org/wiki/Pi_helix","BS:00153"],"synonyms":[{"name":"pi helix","type":"exact"}],"termid":"SO:0001118"}


id: GO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.","definition_xrefs":["RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked glycosylation via tyrosine","synonyms":[{"name":"protein amino acid O-linked glycosylation via tyrosine","type":"exact"}],"termid":"GO:0018245"}


id: GO:1902988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neurofibrillary tangle.","definition_xrefs":["GOC:sjp","GO_REF:0000079","GOC:TermGenie","PMID:22986780","PMID:15897157","PMID:24154541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"neurofibrillary tangle assembly","synonyms":[{"name":"flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"neurofibrillary tangle formation","type":"exact"},{"name":"star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902988"}


id: PBO:0062858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 3","termid":"PBO:0062858"}


id: GO:0032911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of transforming growth factor-beta1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta1 production","termid":"GO:0032908"},{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta production","termid":"GO:0071635"},{"relation_name":"negatively_regulates","term_name":"transforming growth factor beta1 production","termid":"GO:0032905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transforming growth factor beta1 production","synonyms":[{"name":"down regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"down-regulation of transforming growth factor-beta1 production","type":"exact"},{"name":"downregulation of transforming growth factor-beta1 production","type":"exact"},{"name":"inhibition of transforming growth factor-beta1 production","type":"narrow"},{"name":"negative regulation of TGF-B1 production","type":"exact"},{"name":"negative regulation of TGFB1 production","type":"exact"},{"name":"negative regulation of transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032911"}


id: PBO:0048404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 8","termid":"PBO:0048404"}


id: GO:1990233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:bhm","PMID:16540464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"intramolecular phosphotransferase complex","termid":"GO:1990233"}


id: GO:0016890
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0140097","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"site-specific endodeoxyribonuclease activity, specific for altered base","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.25.-"],"termid":"GO:0016890","terms_by_termid":{"GO:1990043":null}}


id: GO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of brassinosteroid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"part_of","term_name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"brassinosteroid mediated signaling pathway","synonyms":[{"name":"brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:0009742"}


id: PBO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pinin ortholog, involved in splicing Pnn1 (predicted)","termid":"PBO:0002876"}


id: SO:0001895
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_ablation","termid":"SO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"TFBS ablation","type":"exact"},{"name":"VEP:TFBS_ablation","type":"exact"},{"name":"transcription factor binding site ablation","type":"exact"}],"termid":"SO:0001895"}


id: PBO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp2","termid":"PBO:0002880"}


id: GO:0022027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of the nucleus of the ventricular zone cell between the apical and the basal zone surfaces. Mitosis occurs when the nucleus is near the apical surface, that is, the lumen of the ventricle.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"interkinetic nuclear migration","termid":"GO:0022027"}


id: FYPO:0009109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"},{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"decreased vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009109"}


id: GO:0044853
data:
  {"annotated_genes":["SJAG_04620","SJAG_04001","SJAG_04714","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84585,85459,99351,114572],"is_not":false,"summary":null,"term":"GO:0044853"}]},"cv_name":"cellular_component","definition":"A membrane raft that is part of the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft","termid":"GO:0045121"},{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03536":null,"SJAG_04001":null,"SJAG_04620":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane raft","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044853","terms_by_termid":{"GO:0044853":null}}


id: PBO:0049360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 19","termid":"PBO:0049360"}


id: FYPO:0004623
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which astral microtubule anchoring at the mitotic spindle pole body does not occur.","definition_xrefs":["PMID:15004232","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished astral microtubule anchoring at mitotic spindle pole body","synonyms":[{"name":"abolished astral microtubule anchoring at mitotic SPB","type":"exact"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished astral microtubule anchoring at mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"astral microtubule anchoring at mitotic spindle pole body abolished","type":"exact"}],"termid":"FYPO:0004623"}


id: GO:0051901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial depolarization","termid":"GO:0051900"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"mitochondrial depolarization","termid":"GO:0051882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial depolarization","synonyms":[{"name":"activation of mitochondrial depolarization","type":"narrow"},{"name":"stimulation of mitochondrial depolarization","type":"narrow"},{"name":"up regulation of mitochondrial depolarization","type":"exact"},{"name":"up-regulation of mitochondrial depolarization","type":"exact"},{"name":"upregulation of mitochondrial depolarization","type":"exact"}],"termid":"GO:0051901"}


id: PBO:0088847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF2/EF3 lysine methyltransferase Efm2/Rgg1","termid":"PBO:0088847"}


id: PBO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030233"}


id: PBO:0089609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc1","termid":"PBO:0089609"}


id: FYPO:0000626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initiation of premeiotic DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication initiation","termid":"FYPO:0000176"},{"relation_name":"is_a","term_name":"abnormal premeiotic DNA replication","termid":"FYPO:0000625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal initiation of premeiotic DNA replication","synonyms":[{"name":"abnormal initiation of meiotic DNA synthesis","type":"related"},{"name":"abnormal initiation of premeiotic DNA synthesis","type":"related"},{"name":"abnormal meiotic DNA replication initiation","type":"related"},{"name":"abnormal premeiotic DNA replication initiation","type":"exact"}],"termid":"FYPO:0000626"}


id: FYECO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with glutamate as the nitrogen source, and then shifted to a medium with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, glutamate to proline","termid":"FYECO:0000220"}


id: PBO:0002753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in M-type mating cells","termid":"PBO:0002753"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: PBO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Z, alpha-1,2-mannosyltransferase Smp3","termid":"PBO:0090387"}


id: PBO:0055258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2685","termid":"PBO:0055258"}


id: GO:0043264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle","termid":"GO:0043228"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular non-membrane-bounded organelle","synonyms":[{"name":"extracellular non-membrane-enclosed organelle","type":"exact"}],"termid":"GO:0043264"}


id: PBO:0091207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln","termid":"PBO:0091207"}


id: PBO:0078996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trRNA-Thr (anticodon AGT) 3-1","termid":"PBO:0078996"}


id: PR:Q9HDY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.02","synonyms":[{"name":"Spom972h-scm3","type":"exact"}],"termid":"PR:Q9HDY7"}


id: PBO:0113581
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi eukaryotes","termid":"PBO:0113581"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: FYPO:0007446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased ER autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased ER degradation","type":"related"},{"name":"decreased ER-phagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased endoplasmic reticulum autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to ER stress","type":"exact"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased reticulophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced reticulophagy during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0007446"}


id: PBO:0080731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC family member 3","termid":"PBO:0080731"}


id: GO:0033391
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex found in the cytoplasm of male germ cells, composed of exceedingly thin filaments that are consolidated into a compact mass or into dense strands of varying thickness that branch to form an irregular network. Contains mRNAs, miRNAs, and protein components involved in miRNA processing (such as Argonaute proteins and the endonuclease Dicer) and in RNA decay (such as the decapping enzyme DCP1a and GW182).","definition_xrefs":["PMID:17183363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromatoid body","termid":"GO:0033391"}


id: PBO:0042616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 2","termid":"PBO:0042616"}


id: PBO:0059560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1D, pseudogene","termid":"PBO:0059560"}


id: PBO:0076525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 38","termid":"PBO:0076525"}


id: GO:0039598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA) initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target mRNA.","definition_xrefs":["GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host nuclear polyadenylation-dependent mRNA catabolic process (obsolete GO:0039598)","synonyms":[{"name":"induction by virus of host nuclear poly(A)-dependent mRNA catabolic process","type":"related"},{"name":"induction by virus of host nuclear polyadenylation-dependent mRNA catabolic process","type":"exact"},{"name":"virus-mediated host mRNA decay by hyperadenylation","type":"narrow"}],"termid":"GO:0039598"}


id: GO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a gram-positive bacterium, the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"}


id: PBO:0029496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_disjunction_at_meiosis_I","termid":"PBO:0029496"}


id: MOD:01477
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an 3'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-fluoro-L-phenylalanine","synonyms":[{"name":"3-fluorophenylalanine","type":"exact"},{"name":"m-fluorophenylalanine","type":"exact"},{"name":"meta-fluorophenylalanine","type":"exact"}],"termid":"MOD:01477"}


id: GO:0170041
data:
  {"annotated_genes":["SJAG_04042","SJAG_01461","SJAG_01592","SJAG_04546","SJAG_00043","SJAG_04577","SJAG_00832","SJAG_03671","SJAG_00635","SJAG_04827","SJAG_00412","SJAG_00674","SJAG_04459","SJAG_03434","SJAG_02972","SJAG_04988","SJAG_01019","SJAG_00636","SJAG_00695","SJAG_02496","SJAG_03288","SJAG_02290","SJAG_03102","SJAG_00964","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114430,94262,107982,98713,94270,99544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[93454,109281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[106543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[94271,102588,89516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[110812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[110813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[83550,110814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046416"},{"annotations":[83739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[110815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902114"},{"annotations":[84562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009448"},{"annotations":[98822,86148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050667"},{"annotations":[106583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[95480,61026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097052"},{"annotations":[96765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[99726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[98715,107984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[107247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006591"},{"annotations":[85026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving non-proteingenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00674":null,"SJAG_00695":null,"SJAG_00832":null,"SJAG_00964":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_02290":null,"SJAG_02496":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03288":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_04042":null,"SJAG_04459":null,"SJAG_04546":null,"SJAG_04577":null,"SJAG_04827":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"non-proteinogenic amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"non-proteinogenic amino acid metabolism","type":"exact"}],"termid":"GO:0170041","terms_by_termid":{"GO:0000053":null,"GO:0006591":null,"GO:0006592":null,"GO:0009448":null,"GO:0009450":null,"GO:0019240":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019478":null,"GO:0019547":null,"GO:0033387":null,"GO:0036088":null,"GO:0042450":null,"GO:0046416":null,"GO:0046436":null,"GO:0050667":null,"GO:0052707":null,"GO:0071269":null,"GO:0097052":null,"GO:1902114":null}}


id: GO:0006739
data:
  {"annotated_genes":["SJAG_01824","SJAG_05314","SJAG_00070","SJAG_04334","SJAG_00501","SJAG_00633","SJAG_02696","SJAG_03091","SJAG_03934","SJAG_03946","SJAG_04362","SJAG_03852","SJAG_01582","SJAG_02148","SJAG_01566","SJAG_02191","SJAG_03786","SJAG_02154","SJAG_04263","SJAG_00685","SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88020,93576,92559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[91214,95873,96964,98194,91215,98193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[92465,104505,109889,85073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[90635,94287,107653,93086,92996,111394,114490],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[85820],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[75011],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03091":null,"SJAG_03786":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"related"},{"name":"NADP (oxidized) metabolic process","type":"exact"},{"name":"NADP (oxidized) metabolism","type":"exact"},{"name":"NADP (reduced) metabolic process","type":"exact"},{"name":"NADP (reduced) metabolism","type":"exact"},{"name":"NADP metabolism","type":"exact"},{"name":"NADPH metabolic process","type":"exact"},{"name":"NADPH metabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"oxidized NADP metabolic process","type":"exact"},{"name":"oxidized NADP metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"reduced NADP metabolic process","type":"exact"},{"name":"reduced NADP metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:0006739","terms_by_termid":{"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: PATO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's structureresembling an irregular meshwork with cross-linking struts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trabecular","termid":"PATO:0002121"}


id: GO:0034508
data:
  {"annotated_genes":["SJAG_03220","SJAG_03048","SJAG_00684","SJAG_04581","SJAG_00718","SJAG_00307","SJAG_02664","SJAG_04696","SJAG_04638","SJAG_03183","SJAG_02465","SJAG_02119","SJAG_03217","SJAG_03867","SJAG_01837","SJAG_03905","SJAG_03619","SJAG_04038","SJAG_00873","SJAG_04989","SJAG_00756","SJAG_02513","SJAG_05273","SJAG_01611","SJAG_00045","SJAG_04547","SJAG_02908","SJAG_02303","SJAG_02872","SJAG_05321","SJAG_04177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114853,98159,111148,95238,109193,88890,91576,86185,102434,110291,113744,114888,85816,90800,95486,99001,107254,103423,112541,85006],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[109625,86894,113501,106390,101554,108259,101624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[113992],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[85777,98473,112748],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00307":null,"SJAG_00684":null,"SJAG_00718":null,"SJAG_00756":null,"SJAG_00873":null,"SJAG_01611":null,"SJAG_01837":null,"SJAG_02119":null,"SJAG_02303":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03183":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03619":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04177":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04638":null,"SJAG_04696":null,"SJAG_04989":null,"SJAG_05273":null,"SJAG_05321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere assembly","type":"exact"},{"name":"centromere organization","type":"exact"},{"name":"chromosome, centromeric region assembly","type":"exact"}],"termid":"GO:0034508","terms_by_termid":{"GO:0034080":null,"GO:0051382":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0063998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 32","termid":"PBO:0063998"}


id: GO:1900400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion import.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:18622392"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900400)","synonyms":[{"name":"regulation of iron import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion import by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:1900400"}


id: PBO:0029226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_pairing","termid":"PBO:0029226"}


id: FYPO:0003586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which replication fork processing is abnormal. Replication fork processing is process in which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted.","definition_xrefs":["PomBase:mah","GO:0031297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork processing","synonyms":[{"name":"abnormal HR-mediated fork restart","type":"related"},{"name":"abnormal collapsed replication fork processing","type":"exact"},{"name":"abnormal recovery from replication fork arrest","type":"exact"},{"name":"abnormal recovery from replication fork stalling","type":"exact"},{"name":"abnormal replication fork processing during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork processing during vegetative growth","type":"exact"},{"name":"abnormal replication fork restart","type":"related"},{"name":"abnormal replication restart","type":"related"}],"termid":"FYPO:0003586"}


id: PBO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member B","termid":"PBO:0047081"}


id: GO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell fate commitment","termid":"GO:0072151"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: PBO:0074212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 1","termid":"PBO:0074212"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_04518","SJAG_00790","SJAG_03237","SJAG_03955","SJAG_04055","SJAG_01874","SJAG_03094","SJAG_00436","SJAG_03784","SJAG_00750","SJAG_01615","SJAG_00403","SJAG_01052","SJAG_03135","SJAG_01670","SJAG_01914","SJAG_01160","SJAG_00112","SJAG_01186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62790,69069,69815,69827,70617,71381,71727,74949,78853],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[78601,78926,76758,58492,65714,70103,66025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[75384,78600,75624,76757,73775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


id: FYPO:0007168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the attachment of microtubules to the cell cortex does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished microtubule attachment to cell cortex","synonyms":[{"name":"abolished microtubule anchoring at cell cortex","type":"exact"},{"name":"abolished microtubule cortical anchor activity","type":"exact"}],"termid":"FYPO:0007168"}


id: PBO:0086439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative kinase; suppressor of GTPase mutant; similar to bovine rhodopsin kinase; may have a role in intracellular sterol transport","termid":"PBO:0086439"}


id: PBO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator (predicted)","termid":"PBO:0001353"}


id: PBO:0047064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member A","termid":"PBO:0047064"}


id: GO:1903818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:19219384","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity","synonyms":[{"name":"activation of voltage-gated potassium channel activity","type":"narrow"},{"name":"activation of voltage gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903818"}


id: GO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle induction","termid":"GO:0072034"},{"relation_name":"is_a","term_name":"positive regulation of metanephros development","termid":"GO:0072216"},{"relation_name":"positively_regulates","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric renal vesicle induction","synonyms":[{"name":"positive regulation of metanephros formation","type":"broad"}],"termid":"GO:0072094"}


id: PBO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEU7 antisense RNA 1","termid":"PBO:0045057"}


id: PBO:0067508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 648, pseudogene","termid":"PBO:0067508"}


id: PBO:0068381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 182","termid":"PBO:0068381"}


id: PBO:0028283
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_silent_mating-type_cassette","termid":"PBO:0028283"}


id: PBO:0038733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 6B","termid":"PBO:0038733"}


id: PBO:0048945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOSR2 divergent transcript","termid":"PBO:0048945"}


id: PBO:0088036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein of unknown function; contains one WD40 repeat in a beta-propeller fold; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of human WDR48/UAF1, which is involved in regulating the Fanconi anemia pathway; deletion mutant is sensitive to various chemicals including phenanthroline, sanguinarine, and nordihydroguaiaretic acid","termid":"PBO:0088036"}


id: PBO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 5","termid":"PBO:0060505"}


id: GO:0070507
data:
  {"annotated_genes":["SJAG_02045","SJAG_00514","SJAG_00845","SJAG_04312","SJAG_01821","SJAG_00244","SJAG_04464","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99803,111116,111381],"is_not":false,"summary":null,"term":"GO:0070507"},{"annotations":[97943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[107510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[87495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[107092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"regulates","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of microtubule cytoskeleton organisation","type":"exact"},{"name":"regulation of microtubule dynamics","type":"exact"}],"termid":"GO:0070507","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: FYPO:0002580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mature tRNA level","synonyms":[{"name":"normal mature tRNA accumulation","type":"related"},{"name":"normal mature tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature tRNA level during vegetative growth","type":"exact"},{"name":"normal mature tRNA transcript level","type":"exact"},{"name":"normal mature transfer RNA level","type":"exact"},{"name":"normal tRNA level","type":"broad"}],"termid":"FYPO:0002580"}


id: PR:Q9Y800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug97 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 97 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.11c","synonyms":[{"name":"Spom972h-mug97","type":"exact"},{"name":"meiotic expression up-regulated protein 33 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y800"}


id: PBO:0049610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 13","termid":"PBO:0049610"}


id: PBO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit Pka1","termid":"PBO:0003165"}


id: PBO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-protein coding RNA, upstream of F2R/PAR1","termid":"PBO:0060661"}


id: GO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein particles by cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045713)","synonyms":[{"name":"LDLr biosynthesis","type":"exact"},{"name":"LDLr biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor anabolism","type":"exact"},{"name":"low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"low-density lipoprotein receptor formation","type":"exact"},{"name":"low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045713"}


id: FYPO:0005513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is increased during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"increased protein localization to centromere during meiotic cell cycle","termid":"FYPO:0005598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to kinetochore during meiosis","synonyms":[{"name":"increased protein localisation to kinetochore during meiosis","type":"exact"},{"name":"increased protein localization to kinetochore during meiotic nuclear division","type":"exact"},{"name":"increased protein localization to meiotic kinetochore","type":"exact"}],"termid":"FYPO:0005513"}


id: SO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+2): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_one","secondary_identifiers":["BS:00216"],"synonyms":[{"name":"beta turn right handed type one","type":"exact"},{"name":"beta_turn_ir","type":"exact"},{"name":"type I beta turn","type":"exact"},{"name":"type I turn","type":"exact"}],"termid":"SO:0001136"}


id: GO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of a megasporocyte, a diploid cell that undergoes meiosis to produce four megaspores, and its descendents.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"megasporocyte nucleus","synonyms":[{"name":"megaspore mother cell nucleus","type":"exact"}],"termid":"GO:0043076"}


id: PBO:0058222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4512","termid":"PBO:0058222"}


id: PBO:0082081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribose-1-phosphate isomerase; catalyzes the isomerization of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate in the methionine salvage pathway","termid":"PBO:0082081"}


id: PBO:0062893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXA1L divergent transcript","termid":"PBO:0062893"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104380],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: PBO:0054239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1621","termid":"PBO:0054239"}


id: PBO:0081921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 890, pseudogene","termid":"PBO:0081921"}


id: PBO:0029604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transporter_activity","termid":"PBO:0029604"}


id: FYPO:0000097
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115198,115336,115559,115571],"is_not":false,"summary":null,"term":"FYPO:0000097"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caffeine. Cells stop growing (and may die) at a concentration of caffeine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02527":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":4,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to caffeine during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_02527","SJAG_04312","SJAG_00266"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","pka1delta","sty1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to caffeine during vegetative growth","type":"exact"},{"name":"sensitive to caffeine during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000097","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000097":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000003":null}}


id: PBO:0082044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglutarate transhydrogenase, and minor D-lactate dehydrogenase; converts D-2-hydroxyglutarate (D-2HG), an oncometabolite, to alpha-ketoglutarate in the presence of FAD, with concomitant reduction of pyruvate to D-lactate; minor lactate dehydrogenase activity; component of the retrograde regulon that consists of genes whose expression are stimulated by damage to mitochondria and reduced in cells grown with glutamate as the sole nitrogen source; located in the cytoplasm","termid":"PBO:0082044"}


id: GO:0048385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: GO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a substance K receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurokinin receptor binding","termid":"GO:0031834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"substance K receptor binding","synonyms":[{"name":"neurokinin-A receptor binding","type":"exact"},{"name":"substance K receptor ligand","type":"narrow"}],"termid":"GO:0031837"}


id: GO:2000636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"positively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of primary miRNA processing","synonyms":[{"name":"positive regulation of pri-miRNA processing","type":"exact"},{"name":"positive regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000636"}


id: GO:0003682
data:
  {"annotated_genes":["SJAG_03927","SJAG_01745","SJAG_04512","SJAG_04183","SJAG_01823","SJAG_04670","SJAG_01046","SJAG_00311","SJAG_04917","SJAG_03418","SJAG_05239","SJAG_00942","SJAG_00170","SJAG_03387","SJAG_03635","SJAG_00471","SJAG_01146","SJAG_00925","SJAG_04407","SJAG_00783","SJAG_00935","SJAG_00861","SJAG_00698","SJAG_04205","SJAG_00584","SJAG_01610","SJAG_02563","SJAG_00768","SJAG_02348","SJAG_00440","SJAG_00641","SJAG_01938","SJAG_03926","SJAG_03694","SJAG_02165","SJAG_00913","SJAG_03441","SJAG_04586","SJAG_00914","SJAG_03460","SJAG_02314","SJAG_05333","SJAG_03689","SJAG_02401","SJAG_03997","SJAG_01653","SJAG_03832","SJAG_03945","SJAG_01010","SJAG_02990","SJAG_01827","SJAG_04210","SJAG_01067","SJAG_02815","SJAG_03905","SJAG_04879","SJAG_00327","SJAG_02773","SJAG_03354","SJAG_00481","SJAG_03982","SJAG_02416","SJAG_00164","SJAG_00863","SJAG_04038","SJAG_03449","SJAG_03787","SJAG_00585","SJAG_01878","SJAG_00728","SJAG_05192","SJAG_00618","SJAG_03944","SJAG_02698","SJAG_03698","SJAG_03128","SJAG_00796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85207,85240,85254,85714,86194,86561,86757,86874,87037,87456,88702,90073,90721,92347,92903,93491,93538,95062,95249,97171,97597,100260,101097,102889,103064,103907,103921,104184,104231,105744,106689,107829,108516,108964,109139,109462,110193,111350,111658,111721,112361,112601,112940,112975,113127],"is_not":false,"summary":null,"term":"GO:0003682"},{"annotations":[103078,107202,110468,106026,91637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031490"},{"annotations":[103002,95674,111427,105213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043035"},{"annotations":[101462,112061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990188"},{"annotations":[103962,104861,109378,92265,99666,106027,90191,88482,106305,99006,113085,107353,99330,113329,93197,111471,109685,113186,104856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031491"},{"annotations":[107960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140585"},{"annotations":[90192,102978,99331,87523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990841"}]},"cv_name":"molecular_function","definition":"Binding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase.","definition_xrefs":["ISBN:0198506732","GOC:jl","PMID:20404130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00164":null,"SJAG_00170":null,"SJAG_00311":null,"SJAG_00327":null,"SJAG_00440":null,"SJAG_00471":null,"SJAG_00481":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00618":null,"SJAG_00641":null,"SJAG_00698":null,"SJAG_00728":null,"SJAG_00768":null,"SJAG_00783":null,"SJAG_00796":null,"SJAG_00861":null,"SJAG_00863":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00935":null,"SJAG_00942":null,"SJAG_01010":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01146":null,"SJAG_01610":null,"SJAG_01653":null,"SJAG_01745":null,"SJAG_01823":null,"SJAG_01827":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02165":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_02563":null,"SJAG_02698":null,"SJAG_02773":null,"SJAG_02815":null,"SJAG_02990":null,"SJAG_03128":null,"SJAG_03354":null,"SJAG_03387":null,"SJAG_03418":null,"SJAG_03441":null,"SJAG_03449":null,"SJAG_03460":null,"SJAG_03635":null,"SJAG_03689":null,"SJAG_03694":null,"SJAG_03698":null,"SJAG_03787":null,"SJAG_03832":null,"SJAG_03905":null,"SJAG_03926":null,"SJAG_03927":null,"SJAG_03944":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04038":null,"SJAG_04183":null,"SJAG_04205":null,"SJAG_04210":null,"SJAG_04407":null,"SJAG_04512":null,"SJAG_04586":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_04917":null,"SJAG_05192":null,"SJAG_05239":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lamin/chromatin binding","type":"narrow"},{"name":"microtubule/chromatin interaction","type":"narrow"},{"name":"nuclear membrane vesicle binding to chromatin","type":"narrow"}],"termid":"GO:0003682","terms_by_termid":{"GO:0003682":null,"GO:0031490":null,"GO:0031491":null,"GO:0043035":null,"GO:0140585":null,"GO:1990188":null,"GO:1990841":null}}


id: GO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"}


id: GO:0070048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Stx1a, Snap25, Vamp8)","type":"narrow"},{"name":"Stx1a-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070048"}


id: PBO:0055662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, muscle differentiation 1","termid":"PBO:0055662"}


id: PBO:0034532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_break-induced_loss_of_heterozygosity","termid":"PBO:0034532"}


id: PBO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication fork protection complex subunit Swi1","termid":"PBO:0003384"}


id: PR:O94584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pps1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--serine O-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.12","synonyms":[{"name":"Spom972h-pps1","type":"exact"},{"name":"phosphatidylserine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94584"}


id: GO:0106026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Gly-tRNA(Ala).","definition_xrefs":["PMID:28362257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016788","GO:0003674","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"Gly-tRNA(Ala) hydrolase activity","termid":"GO:0106026"}


id: PBO:0111327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein, implicated in fatty acid biosynthesis","termid":"PBO:0111327"}


id: GO:0046631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an alpha-beta T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation","synonyms":[{"name":"alpha-beta T lymphocyte activation","type":"exact"},{"name":"alpha-beta T-cell activation","type":"exact"},{"name":"alpha-beta T-lymphocyte activation","type":"exact"}],"termid":"GO:0046631"}


id: GO:0010027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"thylakoid membrane organization","synonyms":[{"name":"thylakoid membrane organisation","type":"exact"},{"name":"thylakoid membrane organization and biogenesis","type":"related"}],"termid":"GO:0010027"}


id: FYPO:0007409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of mRNA is abnormal. mRNA alternative polyadenylation generates mRNA molecules with variable 3'-end lengths from a given pre-mRNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","definition_xrefs":["GO:0110104","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mRNA alternative polyadenylation","synonyms":[{"name":"abnormal mRNA alternative polyadenylation during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA alternative polyadenylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007409"}


id: PBO:0075007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-18","termid":"PBO:0075007"}


id: GO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress-induced premature senescence","synonyms":[{"name":"SIPS","type":"exact"}],"termid":"GO:0090400"}


id: GO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum consisting of flattened, disc-shaped domains known as cisternae. These are typically found close to the nucleus and are generally more prominent in secretory cells.","definition_xrefs":["GOC:vw","PMID:20434336","PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network","synonyms":[{"name":"ER cisternal network","type":"exact"}],"termid":"GO:0071781"}


id: PBO:0066442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 3","termid":"PBO:0066442"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["GOC:bhm","PMID:21734642","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0076010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 1","termid":"PBO:0076010"}


id: GO:0170043
data:
  {"annotated_genes":["SJAG_00635","SJAG_00832","SJAG_02972","SJAG_01592","SJAG_00695","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89516,94271,102588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[106583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[99726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[98715,107984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00635":null,"SJAG_00695":null,"SJAG_00832":null,"SJAG_00964":null,"SJAG_01592":null,"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"non-proteinogenic amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid anabolism","type":"exact"},{"name":"non-proteinogenic amino acid formation","type":"exact"},{"name":"non-proteinogenic amino acid synthesis","type":"exact"},{"name":"non-proteinogenic biosynthesis","type":"exact"}],"termid":"GO:0170043","terms_by_termid":{"GO:0006592":null,"GO:0019240":null,"GO:0052707":null,"GO:0071269":null}}


id: PBO:0065632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 1","termid":"PBO:0065632"}


id: GO:0035431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gluconate across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of gluconate transmembrane transport","termid":"GO:0035430"},{"relation_name":"negatively_regulates","term_name":"gluconate transmembrane transport","termid":"GO:0035429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gluconate transmembrane transport","secondary_identifiers":["GO:0032894"],"synonyms":[{"name":"down regulation of gluconate transport","type":"exact"},{"name":"down-regulation of gluconate transport","type":"exact"},{"name":"downregulation of gluconate transport","type":"exact"},{"name":"inhibition of gluconate transport","type":"narrow"},{"name":"negative regulation of gluconate membrane transport","type":"exact"},{"name":"negative regulation of gluconate transport","type":"related"}],"termid":"GO:0035431"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: SO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_trimethylation_site","synonyms":[{"name":"H3K9 tri-methylation site","type":"exact"},{"name":"H3K9Me3","type":"related"}],"termid":"SO:0001707"}


id: GO:0098727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the numbers of cells of a particular type or in a tissue are maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of cell number","termid":"GO:0098727"}


id: GO:0072351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid biosynthetic process","synonyms":[{"name":"tricarboxylate biosynthesis","type":"exact"},{"name":"tricarboxylate biosynthetic process","type":"exact"},{"name":"tricarboxylic acid anabolism","type":"exact"},{"name":"tricarboxylic acid biosynthesis","type":"exact"},{"name":"tricarboxylic acid formation","type":"exact"},{"name":"tricarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072351"}


id: PBO:0080732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC3 antisense RNA 1","termid":"PBO:0080732"}


id: FYPO:0000925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosomes are not segregated equally to the two spindle poles in a meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"unequal meiotic chromosome segregation","synonyms":[{"name":"abnormal meiotic chromosome disjunction","type":"exact"},{"name":"chromosome non-disjunction at meiosis","type":"related"},{"name":"meiotic chromosome nondisjunction","type":"related"}],"termid":"FYPO:0000925"}


id: GO:0004826
data:
  {"annotated_genes":["SJAG_02615","SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89732,93318,114082],"is_not":false,"summary":null,"term":"GO:0004826"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe).","definition_xrefs":["EC:6.1.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_02615":null,"SJAG_03626":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140101","GO:0003674","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"phenylalanine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PHENYLALANINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380203","RHEA:19413","Reactome:R-HSA-379848"],"synonyms":[{"name":"L-phenylalanine:tRNAPhe ligase (AMP-forming) activity","type":"related"},{"name":"L-phenylalanyl-tRNA synthetase activity","type":"related"},{"name":"phenylalanine translase activity","type":"related"},{"name":"phenylalanine-tRNA synthetase activity","type":"related"},{"name":"phenylalanyl-tRNA ligase activity","type":"related"},{"name":"phenylalanyl-tRNA synthetase activity","type":"exact"},{"name":"phenylalanyl-transfer RNA ligase activity","type":"related"},{"name":"phenylalanyl-transfer RNA synthetase activity","type":"related"},{"name":"phenylalanyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004826","terms_by_termid":{"GO:0004826":null}}


id: GO:0072760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a GW 7647 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to GW 7647","termid":"GO:1901593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to GW 7647","termid":"GO:0072760"}


id: PBO:0055562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2998","termid":"PBO:0055562"}


id: GO:0015687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-hydroxamate, the iron-bound form of the iron chelator hydroxamate, is transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:23192658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0098771","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ferric-hydroxamate import into cell","synonyms":[{"name":"ferric-hydroxamate transport","type":"broad"}],"termid":"GO:0015687"}


id: PBO:0076716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 23","termid":"PBO:0076716"}


id: GO:1904175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GO_REF:0000059","GOC:dph","GOC:TermGenie","PMID:24843136"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904175)","synonyms":[{"name":"activation of histone demethylase activity (H3-K4 specific)","type":"narrow"},{"name":"up regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"up-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"upregulation of histone demethylase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:1904175"}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: PR:P0CT68
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.10","synonyms":[{"name":"Spom972h-rpl2001","type":"exact"},{"name":"YL17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT68"}


id: PR:Q09841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01803","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.07","secondary_identifiers":["UniProtKB:Q09841"],"synonyms":[{"name":"Spom972h-PSMB7","type":"exact"}],"termid":"PR:Q09841"}


id: GO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The wall surrounding a mature pollen grain; a multilayered structure consisting of a pectocellulosic intine surrounded by a sporopollenin-based exine, which itself contains two layers, the inner nexine and the outer sexine.","definition_xrefs":["GOC:fz","PMID:15131249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen wall","synonyms":[{"name":"microspore wall","type":"exact"}],"termid":"GO:0043667"}


id: GO:0006582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"melanin metabolic process","synonyms":[{"name":"melanin metabolism","type":"exact"}],"termid":"GO:0006582"}


id: GO:0031597
data:
  {"annotated_genes":["SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111250],"is_not":false,"summary":null,"term":"GO:0031597"}]},"cv_name":"cellular_component","definition":"A proteasome complex found in the cytosol of a cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031597","terms_by_termid":{"GO:0031597":null}}


id: PBO:0090305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh6","termid":"PBO:0090305"}


id: FYPO:0001160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition during stationary phase","synonyms":[{"name":"cell cycle arrest in mitotic G2 phase during stationary phase","type":"related"},{"name":"mitotic G2 phase arrest during stationary phase","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition during stationary phase","type":"exact"}],"termid":"FYPO:0001160"}


id: GO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters. The axon terminus is considered to be the whole region of thickening and the terminal button is a specialized region of it.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection terminus","termid":"GO:0044306"},{"relation_name":"is_a","term_name":"presynapse","termid":"GO:0098793"},{"relation_name":"part_of","term_name":"distal axon","termid":"GO:0150034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon terminus","secondary_identifiers":["NIF_Subcellular:nlx_subcell_20090512"],"synonyms":[{"name":"axon terminal","type":"exact"},{"name":"axon terminal specialization","type":"related"},{"name":"nerve ending","type":"exact"}],"termid":"GO:0043679"}


id: GO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.","definition_xrefs":["GOC:tb","PMID:25081480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"sieve element differentiation","termid":"GO:0090603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element enucleation","termid":"GO:0090602"}


id: PBO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Sog2","termid":"PBO:0036472"}


id: GO:0097491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection guidance","synonyms":[{"name":"sympathetic neurite guidance","type":"narrow"},{"name":"sympathetic neuron process guidance","type":"exact"},{"name":"sympathetic neuron protrusion guidance","type":"exact"},{"name":"sympathetic neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097491"}


id: PBO:0074242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 2","termid":"PBO:0074242"}


id: GO:0043854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress and when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl","PMID:22206667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensitive monoatomic ion channel activity","termid":"GO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyclic nucleotide-gated mechanosensitive monoatomic ion channel activity","synonyms":[{"name":"MscS","type":"related"},{"name":"cyclic nucleotide gated mechanosensitive ion channel activity","type":"exact"},{"name":"cyclic nucleotide regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-gated mechanosensitive ion channel activity","type":"broad"},{"name":"cyclic nucleotide-regulated mechanosensitive ion channel","type":"exact"},{"name":"cyclic nucleotide-regulated small mechanosensitive ion channel","type":"related"},{"name":"small conductance mechanosensitive ion channel","type":"exact"}],"termid":"GO:0043854"}


id: GO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of ectodermal cell fate specification","termid":"GO:0042665"},{"relation_name":"negatively_regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectodermal cell fate specification","synonyms":[{"name":"down regulation of ectodermal cell fate specification","type":"exact"},{"name":"down-regulation of ectodermal cell fate specification","type":"exact"},{"name":"downregulation of ectodermal cell fate specification","type":"exact"},{"name":"inhibition of ectodermal cell fate specification","type":"narrow"},{"name":"negative regulation of ectoderm cell fate specification","type":"exact"},{"name":"suppression of ectoderm cell fate","type":"exact"},{"name":"suppression of ectodermal cell fate","type":"exact"}],"termid":"GO:0042666"}


id: PBO:0038844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 13","termid":"PBO:0038844"}


id: GO:1902029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["GOC:TermGenie","PMID:22110608"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K18 acetylation (obsolete GO:1902029)","synonyms":[{"name":"activation of histone H3 acetylation at K18","type":"exact"},{"name":"activation of histone H3-K18 acetylation","type":"narrow"},{"name":"activation of histone H3K18 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K18","type":"exact"},{"name":"positive regulation of histone H3K18 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up regulation of histone H3K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"up-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"up-regulation of histone H3K18 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K18","type":"exact"},{"name":"upregulation of histone H3-K18 acetylation","type":"exact"},{"name":"upregulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902029"}


id: PBO:0068448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 22, pseudogene","termid":"PBO:0068448"}


id: GO:0016868
data:
  {"annotated_genes":["SJAG_00978","SJAG_02009","SJAG_00134","SJAG_01209","SJAG_02783","SJAG_03723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046538"},{"annotations":[84675,84334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004610"},{"annotations":[111907,104981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004614"},{"annotations":[91122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004619"},{"annotations":[85332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004615"},{"annotations":[111908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008973"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_00978":null,"SJAG_01209":null,"SJAG_02009":null,"SJAG_02783":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular phosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016777","EC:5.4.2.-"],"synonyms":[{"name":"intramolecular transferase activity, phosphotransferases","type":"exact"},{"name":"phosphomutase activity","type":"exact"},{"name":"phosphotransferase activity, with regeneration of donors, apparently catalyzing intramolecular transfers","type":"exact"}],"termid":"GO:0016868","terms_by_termid":{"GO:0004610":null,"GO:0004614":null,"GO:0004615":null,"GO:0004619":null,"GO:0008973":null,"GO:0046538":null}}


id: SO:0000978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a guide_RNA that specifies the insertions and deletions of bases in the editing of a target mRNA.","definition_xrefs":["SO:jk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guide_RNA_region","termid":"SO:0000930"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"template_region","synonyms":[{"name":"information region","type":"exact"},{"name":"template region","type":"exact"}],"termid":"SO:0000978"}


id: GO:0000480
data:
  {"annotated_genes":["SJAG_04524","SJAG_04224","SJAG_02250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95909,103701,111263],"is_not":false,"summary":null,"term":"GO:0000480"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.","definition_xrefs":["PMID:10690410","PMID:15282326","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endonucleolytic cleavage at A-prime","type":"narrow"},{"name":"endonucleolytic cleavage at A0","type":"narrow"}],"termid":"GO:0000480","terms_by_termid":{"GO:0000480":null}}


id: GO:0050237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + O2 = pyridoxal + H2O2.","definition_xrefs":["EC:1.1.3.12","MetaCyc:PYRIDOXINE-4-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxine 4-oxidase activity","secondary_identifiers":["RHEA:15033"],"synonyms":[{"name":"pyridoxin 4-oxidase activity","type":"related"},{"name":"pyridoxine:oxygen 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol 4-oxidase activity","type":"related"}],"termid":"GO:0050237"}


id: GO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"}


id: PBO:0109602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A3","termid":"PBO:0109602"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["GOC:jsg","PMID:11546772","RESID:AA0387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine octanoylation","secondary_identifiers":["RESID:AA0386"],"termid":"GO:0051368"}


id: PBO:0110969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3126","termid":"PBO:0110969"}


id: PBO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_elongated_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034519"}


id: PBO:0068247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 4","termid":"PBO:0068247"}


id: PBO:0082684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the exomer complex; the exomer which also contains Csh6p, Bch1p, Bch2p, and Bud7, is involved in the export of select proteins, such as chitin synthase Chs3p, from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; Chs5p is the only protein with a BRCT domain that is not localized to the nucleus","termid":"PBO:0082684"}


id: PBO:0074478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1 pseudogene 1","termid":"PBO:0074478"}


id: PBO:0056510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 2","termid":"PBO:0056510"}


id: PBO:0059626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH1 pseudogene 1","termid":"PBO:0059626"}


id: PBO:0051254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-22-2 (pseudogene)","termid":"PBO:0051254"}


id: GO:0006153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete purine nucleosidase reaction (obsolete GO:0006153)","synonyms":[{"name":"purine nucleosidase reaction","type":"exact"}],"termid":"GO:0006153"}


id: GO:0031901
data:
  {"annotated_genes":["SJAG_01112","SJAG_00314","SJAG_01379"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91996,95804,108529],"is_not":false,"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome membrane","termid":"GO:0010008"},{"relation_name":"part_of","term_name":"early endosome","termid":"GO:0005769"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_01379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"early endosome membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031901","terms_by_termid":{"GO:0031901":null}}


id: PBO:0061357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 17","termid":"PBO:0061357"}


id: GO:0043944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042174"},{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"negative regulation of asexual reproduction","termid":"GO:1903665"},{"relation_name":"negatively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: GO:0045212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitter receptors.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor biosynthetic process (obsolete GO:0045212)","synonyms":[{"name":"neurotransmitter receptor anabolism","type":"exact"},{"name":"neurotransmitter receptor biosynthesis","type":"exact"},{"name":"neurotransmitter receptor formation","type":"exact"},{"name":"neurotransmitter receptor synthesis","type":"exact"}],"termid":"GO:0045212"}


id: GO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction (obsolete GO:0052257)","synonyms":[{"name":"MAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"MAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor-dependent induction of innate immunity of other organism","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052257"}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["GOC:jl","PMID:17259313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109448],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: PBO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_division_of","termid":"PBO:0034426"}


id: MOD:01313
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+9amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:63#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+9amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(9)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+9amu), N-term & K","type":"related"}],"termid":"MOD:01313"}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6P9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: PBO:0064321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 3","termid":"PBO:0064321"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: PBO:0017026
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Microtubule Binder","termid":"PBO:0017026"}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:25355208","PMID:10706428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: GO:0106336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the yolk syncytial layer over time, from its initial formation to the mature structure. The yolk syncytial layer is the peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm.","definition_xrefs":["PMID:29180571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"yolk syncytial layer development","synonyms":[{"name":"YSL development","type":"related"}],"termid":"GO:0106336"}


id: SO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons CCN (CCT, CCC, CCA and CCG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline","synonyms":[{"name":"P","type":"exact"},{"name":"Pro","type":"exact"}],"termid":"SO:0001439"}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: GO:0030660
data:
  {"annotated_genes":["SJAG_04609","SJAG_00379","SJAG_01508","SJAG_02234","SJAG_04391","SJAG_01809","SJAG_04569","SJAG_00192","SJAG_04517","SJAG_04565","SJAG_02282","SJAG_02482","SJAG_04002","SJAG_04070","SJAG_04474"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114918,109075,97222,108857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[108979,90995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[94643,89318,112446,113456,103199,99364,100214,109824,94554],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle associated with the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00379":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi-associated vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi vesicle membrane","type":"related"}],"termid":"GO:0030660","terms_by_termid":{"GO:0030121":null,"GO:0030126":null,"GO:0030130":null}}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["EC:1.1.1.278","RHEA:18137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-5alpha-steroid dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07138","MetaCyc:1.1.1.278-RXN"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: GO:0097123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A1-CDK2 complex","termid":"GO:0097123"}


id: PBO:0075470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 20 pseudogene 1","termid":"PBO:0075470"}


id: GO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and/or excretes the end products of body metabolism in the form of urine.","definition_xrefs":["ISBN:0721662544","GOC:dph","GOC:mtg_kidney_jan10","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney development","secondary_identifiers":["Wikipedia:Kidney_development"],"synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0001822"}


id: PBO:0027271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0027271"}


id: FYPO:0002069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning","termid":"FYPO:0000517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized nucleus","synonyms":[{"name":"abnormal nucleus location","type":"exact"},{"name":"abnormal nucleus position","type":"exact"},{"name":"displaced nucleus","type":"exact"},{"name":"mislocalised nucleus","type":"exact"},{"name":"misplaced nuclei","type":"exact"},{"name":"misplaced nucleus","type":"exact"},{"name":"nuclear displacement","type":"exact"},{"name":"nuclear position: abnormal","type":"related"}],"termid":"FYPO:0002069"}


id: MOD:00605
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative, C-Terminal/Glutamate/Aspartate sulfonation","definition_xrefs":["Unimod:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), light C12","synonyms":[{"name":"Light Sulfanilic Acid (SA) C12","type":"related"},{"name":"SulfanilicAcid","type":"related"}],"termid":"MOD:00605"}


id: FYPO:0002698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of methylenetetrahydrofolate reductase (NADPH) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased methylenetetrahydrofolate reductase (NADPH) activity","termid":"FYPO:0002698"}


id: PBO:0011092
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PhytoCheletin Synthase","termid":"PBO:0011092"}


id: PBO:0064477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma 2, accessory subunit","termid":"PBO:0064477"}


id: FYPO:0002723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to cadmium ion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to cadmium ion","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to cadmium ion","type":"exact"},{"name":"altered colony color during cellular response to cadmium ion","type":"related"},{"name":"altered colony colour during cellular response to cadmium ion","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to cadmium","type":"exact"},{"name":"increased cellular pigment accumulation during cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to cadmium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002723"}


id: GO:0072024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the macula densa over time, from its formation to the mature structure. The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macula densa development","termid":"GO:0072024"}


id: FYECO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were first nitrogen starved at standard growth temperature, and then transferred to a rich medium at high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation at normal temperature and shift to high temperature in rich medium","termid":"FYECO:0000292"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:25089138","GOC:rph","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: PBO:0026956
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_new_cell_tip","termid":"PBO:0026956"}


id: GO:1901906
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine pentaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"diadenosine pentaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine pentaphosphate metabolism","type":"exact"},{"name":"diadenosyl pentaphosphate metabolic process","type":"exact"},{"name":"diadenosyl pentaphosphate metabolism","type":"exact"}],"termid":"GO:1901906","terms_by_termid":{"GO:1901907":null}}


id: PBO:0065813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A interacting protein like 1","termid":"PBO:0065813"}


id: PBO:0065202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF31 antisense RNA 1","termid":"PBO:0065202"}


id: GO:0008480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sarcosine + H2O + electron-transfer flavoprotein = glycine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.3","RHEA:19793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sarcosine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00611","MetaCyc:SARCOSINE-DEHYDROGENASE-RXN","Reactome:R-HSA-6797913"],"synonyms":[{"name":"monomethylglycine dehydrogenase activity","type":"related"},{"name":"sarcosine N-demethylase activity","type":"related"},{"name":"sarcosine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"sarcosine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0008480"}


id: GO:0001042
data:
  {"annotated_genes":["SJAG_01744"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70571],"is_not":false,"summary":null,"term":"GO:0001042"}]},"cv_name":"molecular_function","definition":"Binding to a RNA polymerase I core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of seventeen subunits.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase I core binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001042","terms_by_termid":{"GO:0001042":null}}


id: GO:0030030
data:
  {"annotated_genes":["SJAG_01894","SJAG_01943","SJAG_04509","SJAG_03453","SJAG_02700","SJAG_02864","SJAG_02379","SJAG_02989","SJAG_00514","SJAG_01993","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95075,110391,88609,84399,94392,94994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[84036,86960,89579,107440,85995],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","GOC:mah","PMID:16318917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection organisation","type":"exact"},{"name":"cell projection organization and biogenesis","type":"related"},{"name":"cell surface structure organization and biogenesis","type":"related"}],"termid":"GO:0030030","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: GO:0009015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-succinyl-L-arginine + 2 H2O + 2 H+ = N(2)-succinyl-L-ornithine + CO2 + 2 NH4.","definition_xrefs":["RHEA:19533","EC:3.5.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-succinylarginine dihydrolase activity","secondary_identifiers":["KEGG_REACTION:R04189","MetaCyc:SUCCARGDIHYDRO-RXN"],"synonyms":[{"name":"2-N-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"related"},{"name":"AruB","type":"related"},{"name":"AstB","type":"related"},{"name":"N2-succinyl-L-arginine iminohydrolase (decarboxylating)","type":"exact"},{"name":"N2-succinylarginine dihydrolase activity","type":"exact"},{"name":"SADH","type":"related"},{"name":"arginine succinylhydrolase activity","type":"exact"},{"name":"succinylarginine dihydrolase activity","type":"exact"}],"termid":"GO:0009015"}


id: PBO:0084181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone and assembly chaperone for Rps6a/b; involved in histone exchange, replacing histone H2A-H2B dimers or histone variant dimers from assembled nucleosomes; promotes solubility of Rps6a, and 40S ribosomal subunit biogenesis; role in transport of H2A and H2B histones to the nucleus; regulates microtubule dynamics during mitosis; interacts with mitotic cyclin Clb2p; controls bud morphogenesis; phosphorylated by CK2; protein abundance increases in response to DNA replication stress","termid":"PBO:0084181"}


id: PBO:0081501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 402, pseudogene","termid":"PBO:0081501"}


id: GO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a leukemia inhibitory factor to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway","synonyms":[{"name":"leukemia inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0048861"}


id: GO:0110095
data:
  {"annotated_genes":["SJAG_02010","SJAG_01457","SJAG_02960","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108807],"is_not":false,"summary":null,"term":"GO:0110095"},{"annotations":[101119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[91641,99576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of an aldehyde. These may include transport of aldehydes away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["GOC:vw","PMID:25656103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of aldehyde","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110095","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: GO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against microbes mediated by anti-microbial peptides in body fluid.","definition_xrefs":["PMID:15761415","PMID:24287494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antimicrobial humoral immune response mediated by antimicrobial peptide","synonyms":[{"name":"antimicrobial peptide-mediated antimicrobial humoral response","type":"exact"},{"name":"peptide-mediated antimicrobial humoral response","type":"broad"}],"termid":"GO:0061844"}


id: GO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol + NADP+ = 2-trans,6-trans-farnesal + H+ + NADPH.","definition_xrefs":["EC:1.1.1.216","RHEA:14697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"farnesol dehydrogenase activity","secondary_identifiers":["MetaCyc:FARNESOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03264"],"synonyms":[{"name":"2-trans,6-trans-farnesol:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-farnesol dehydrogenase activity","type":"related"},{"name":"farnesol (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047886"}


id: PBO:0027429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0027429"}


id: GO:1900491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900491"}


id: GO:0098825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine guanylation","termid":"GO:0098825"}


id: SO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PRE is a (yeast) TFBS with consensus site [TGAAAC(A/G)].","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"},{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone_response_element","synonyms":[{"name":"PRE","type":"exact"},{"name":"pheromone response element","type":"exact"}],"termid":"SO:0002045"}


id: PBO:0039227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT1 substrate 1","termid":"PBO:0039227"}


id: GO:0098650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptidyl-proline 4-dioxygenase.","definition_xrefs":["GOC:kvm","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase binding","termid":"GO:0098650"}


id: GO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the regulated release of a neurotransmitter from a cell in its host organism.","definition_xrefs":["PMID:1328520","PMID:7901002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host neurotransmitter secretion","termid":"GO:0044079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host neurotransmitter secretion","synonyms":[{"name":"negative regulation by symbiont of host neurotransmitter secretion","type":"exact"}],"termid":"GO:0044762"}


id: GO:0030740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-3-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.39","RHEA:18877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol 3-methyltransferase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-1-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01189"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:myo-inositol 1-methyltransferase activity","type":"related"},{"name":"inositol L-1-methyltransferase activity","type":"related"},{"name":"myo-inositol 1-O-methyltransferase (name based on 1L-numbering system and not 1D-numbering)","type":"related"},{"name":"myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 1-methyltransferase activity","type":"related"}],"termid":"GO:0030740"}


id: PR:O14240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eaf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein eaf6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.09","synonyms":[{"name":"Spom972h-eaf6","type":"exact"}],"termid":"PR:O14240"}


id: SO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting sequence that increases the utilization of (some) eukaryotic promoters, and can function in either orientation and in any location (upstream or downstream) relative to the promoter.","direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer","secondary_identifiers":["http://en.wikipedia.org/wiki/Enhancer_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:enhancer","type":"exact"}],"termid":"SO:0000165"}


id: PBO:0059686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 52","termid":"PBO:0059686"}


id: PBO:0049212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3B","termid":"PBO:0049212"}


id: GO:0016573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of an acetyl group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone acetylation (obsolete GO:0016573)","termid":"GO:0016573"}


id: GO:0035987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.","definition_xrefs":["GOC:yaf","CL:0000223","PMID:17624332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"endoderm formation","termid":"GO:0001706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell differentiation","synonyms":[{"name":"endoderm cell differentiation","type":"exact"}],"termid":"GO:0035987"}


id: PBO:0055955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 69","termid":"PBO:0055955"}


id: GO:0097284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a hepatocyte, the main structural component of the liver.","definition_xrefs":["CL:0000182","GOC:jc","GOC:mtg_apoptosis","PMID:15856020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte apoptotic process","synonyms":[{"name":"hepatocyte apoptosis","type":"narrow"}],"termid":"GO:0097284"}


id: PBO:0057180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 331","termid":"PBO:0057180"}


id: PBO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase (predicted)","termid":"PBO:0001982"}


id: PATO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in compound by virtue of the bearer's tendency to act as a hydron donor.","definition_xrefs":["chemicool:chemicool"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound acidity","termid":"PATO:0001427"}


id: GO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing phosphate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatase activity","termid":"GO:0010921"}


id: GO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-fructose 6-phosphate = UDP + sucrose 6-phosphate.","definition_xrefs":["EC:2.4.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"sucrose-phosphate synthase activity","secondary_identifiers":["RHEA:22172","MetaCyc:SUCROSE-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"SPS","type":"related"},{"name":"UDP-glucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-fructose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-fructose-6-phosphate 2-alpha-D-glucosyltransferase activity","type":"related"},{"name":"sucrose 6-phosphate synthase activity","type":"related"},{"name":"sucrose phosphate synthetase activity","type":"related"},{"name":"sucrose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"sucrosephosphate-UDP glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-fructose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0046524"}


id: SO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where the deletion, is greater than the extent of the underlying genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_ablation","synonyms":[{"name":"feature ablation","type":"exact"}],"termid":"SO:0001879"}


id: FYPO:0003553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA catabolic process","synonyms":[{"name":"increased RNA degradation","type":"exact"},{"name":"increased RNA catabolism","type":"exact"},{"name":"increased RNA breakdown","type":"exact"}],"termid":"FYPO:0003553"}


id: PBO:0084270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport","termid":"PBO:0084270"}


id: GO:0018323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-cysteine to form peptidyl-L-cysteine sulfinic acid.","definition_xrefs":["RESID:AA0262"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-cysteine sulfinic acid (obsolete GO:0018323)","synonyms":[{"name":"enzyme active site formation via L-cysteine sulphinic acid","type":"exact"}],"termid":"GO:0018323"}


id: GO:0034826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-1,2-dihydroxy-1,2,5,6,7,8-hexahydronaphthalene + NAD+ = 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-1,2,5,6,7,8-hexyhadronaphthalene dehydrogenase activity (obsolete GO:0034826)","termid":"GO:0034826"}


id: PBO:0062423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 84 pseudogene","termid":"PBO:0062423"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: PBO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 4","termid":"PBO:0044508"}


id: GO:0021561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve development","synonyms":[{"name":"CN VII development","type":"related"},{"name":"cranial nerve 7 development","type":"exact"},{"name":"cranial nerve VII development","type":"exact"}],"termid":"GO:0021561"}


id: PBO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor B","termid":"PBO:0001446"}


id: PBO:0074926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 94","termid":"PBO:0074926"}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: GO:0043171
data:
  {"annotated_genes":["SJAG_01430","SJAG_00181","SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97140,101829,110517],"is_not":false,"summary":null,"term":"GO:0043171"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_01088":null,"SJAG_01430":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"peptide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide breakdown","type":"exact"},{"name":"peptide catabolism","type":"exact"},{"name":"peptide degradation","type":"exact"}],"termid":"GO:0043171","terms_by_termid":{"GO:0043171":null}}


id: PBO:0048412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 2","termid":"PBO:0048412"}


id: PBO:0027277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0027277"}


id: PBO:0050095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 5","termid":"PBO:0050095"}


id: PBO:0049297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 1","termid":"PBO:0049297"}


id: PBO:0075251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 3","termid":"PBO:0075251"}


id: PBO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FH21 member 1","termid":"PBO:0046543"}


id: PBO:0029839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0029839"}


id: PBO:0050089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 2","termid":"PBO:0050089"}


id: GO:0160183
data:
  {"annotated_genes":["SJAG_03435","SJAG_00079","SJAG_01073","SJAG_04991","SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100469,86530,95498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[86094,85178,110604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a target membrane and an autophagosome during autophagy.","definition_xrefs":["PMID:36635405","PMID:30544615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00079":null,"SJAG_01073":null,"SJAG_03170":null,"SJAG_03435":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"autophagosome-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160183","terms_by_termid":{"GO:0140506":null,"GO:0140580":null}}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: PBO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 5","termid":"PBO:0047504"}


id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["PMID:16056255","ISBN:0781735149","CL:0000451","PMID:15814331","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: GO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient selenylation of peptidyl-cysteine to form S-selenyl-L-cysteine.","definition_xrefs":["RESID:AA0277"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-selenyl-L-cysteine (obsolete GO:0018183)","synonyms":[{"name":"enzyme active site formation via S-selenyl-L-cysteine","type":"exact"}],"termid":"GO:0018183"}


id: PBO:0068035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 340","termid":"PBO:0068035"}


id: PBO:0055560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2996","termid":"PBO:0055560"}


id: PBO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK cascade adaptor protein Ste4","termid":"PBO:0090096"}


id: PBO:0059876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR12 pseudogene 1","termid":"PBO:0059876"}


id: PBO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 7 (pseudogene)","termid":"PBO:0050672"}


id: GO:0070983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a dendrite is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:sart","PMID:15046878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection guidance","termid":"GO:0097485"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite guidance","synonyms":[{"name":"dendritic guidance","type":"exact"}],"termid":"GO:0070983"}


id: PR:Q9UTA2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.18 gene.","definition_xrefs":["UniProtKB:Q9UTA2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"redox protein fmp46, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.18","synonyms":[{"name":"Spom972h-SPAC25B8.18","type":"exact"}],"termid":"PR:Q9UTA2"}


id: PBO:0109016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 17, pseudogene","termid":"PBO:0109016"}


id: PBO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 2","termid":"PBO:0050541"}


id: PATO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000175 behavioral function (obsolete PATO:0000175)","termid":"PATO:0000175"}


id: GO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"leukotriene transport","termid":"GO:0071716"}


id: PBO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIVEP2 divergent transcript","termid":"PBO:0050005"}


id: PBO:0058446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5011","termid":"PBO:0058446"}


id: GO:0035267
data:
  {"annotated_genes":["SJAG_04097","SJAG_05282","SJAG_03230","SJAG_02385","SJAG_02990","SJAG_03036","SJAG_00783","SJAG_00187","SJAG_03628","SJAG_03579","SJAG_01016","SJAG_01385","SJAG_03792","SJAG_03145","SJAG_00349","SJAG_04793","SJAG_04355"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86806,88470,90111,90408,93330,95054,95767,97067,97781,100130,100796,102950,105140,108313,109223,111654,114606],"is_not":false,"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).","definition_xrefs":["PMID:14966270","GOC:ecd","PMID:10966108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4/H2A histone acetyltransferase complex","termid":"GO:0043189"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TIP60 histone acetylase complex","type":"exact"},{"name":"TIP60 histone acetyltransferase complex","type":"exact"}],"termid":"GO:0035267","terms_by_termid":{"GO:0035267":null}}


id: PBO:0048069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 20","termid":"PBO:0048069"}


id: PBO:0003855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial manganese ion transporter (predicted)","termid":"PBO:0003855"}


id: GO:0004436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol = D-myo-inositol 1,2-cyclic phosphate + diacylglycerol.","definition_xrefs":["EC:4.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphatidylinositol diacylglycerol-lyase activity","secondary_identifiers":["MetaCyc:3.1.4.10-RXN","RHEA:17093"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol diacyl-sn-glycerol-lyase (1D-myo-inositol-1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-1D-myo-inositol diacylglycerol-lyase (1,2-cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidyl-D-myo-inositol inositolphosphohydrolase (cyclic-phosphate-forming)","type":"related"},{"name":"1-phosphatidylinositol phosphodiesterase activity","type":"exact"},{"name":"monophosphatidylinositol phosphodiesterase activity","type":"broad"}],"termid":"GO:0004436"}


id: PBO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 3","termid":"PBO:0045704"}


id: GO:0051695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament depolymerization","termid":"GO:0030836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin filament uncapping","synonyms":[{"name":"F-actin uncapping","type":"exact"}],"termid":"GO:0051695"}


id: GO:0019323
data:
  {"annotated_genes":["SJAG_03958","SJAG_03174","SJAG_02010","SJAG_04276","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91857,97275,91125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[100445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[91127,97276,91858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"pentose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pentose breakdown","type":"exact"},{"name":"pentose catabolism","type":"exact"},{"name":"pentose degradation","type":"exact"}],"termid":"GO:0019323","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0042843":null}}


id: PBO:0028589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intermittent_monopolar_cell_growth","termid":"PBO:0028589"}


id: GO:0061231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a mesonephric glomerulus vasculature from an initial condition to its mature state. This process begins with the formation of the mesonephric glomerulus vasculature and ends with the mature structure. The mesonephric glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the mesonephric glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus vasculature development","termid":"GO:0072012"},{"relation_name":"part_of","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerulus vasculature development","termid":"GO:0061231"}


id: FYPO:0001056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-arginine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal arginine import","synonyms":[{"name":"normal L-arginine import","type":"exact"},{"name":"normal L-arginine import across plasma membrane","type":"exact"},{"name":"normal L-arginine uptake","type":"exact"},{"name":"normal arginine import during mitotic cell cycle","type":"related"},{"name":"normal arginine import during vegetative growth","type":"exact"},{"name":"normal arginine import into cell","type":"exact"}],"termid":"FYPO:0001056"}


id: GO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans.","definition_xrefs":["EC:3.2.1.89","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arabinogalactan endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.89-RXN"],"synonyms":[{"name":"arabinogalactan 4-beta-D-galactanohydrolase activity","type":"related"},{"name":"arabinogalactanase activity","type":"exact"},{"name":"endo-1,4-beta-galactanase activity","type":"exact"},{"name":"galactanase activity","type":"exact"}],"termid":"GO:0031218"}


id: PBO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A12","termid":"PBO:0044104"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: PBO:0003494
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facilitates Rhp51 assembly at damage sites independently of Rhp57","termid":"PBO:0003494"}


id: PBO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis Rli1 (predicted)","termid":"PBO:0004836"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: PR:P17610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt3 gene.","definition_xrefs":["UniProtKB:P17610","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.03","synonyms":[{"name":"RAB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt3","type":"exact"}],"termid":"PR:P17610"}


id: GO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete conjugation (obsolete GO:0000746)","secondary_identifiers":["Wikipedia:Conjugation"],"termid":"GO:0000746"}


id: PBO:0005516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit (predicted)","termid":"PBO:0005516"}


id: PBO:0016073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial cortical node protein Nod1","termid":"PBO:0016073"}


id: FYPO:0000615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of mitotic S phase","synonyms":[{"name":"decreased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: increased rate","type":"related"},{"name":"reduced duration of mitotic S phase","type":"exact"}],"termid":"FYPO:0000615"}


id: FYPO:0006739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at gene promoter region","termid":"FYPO:0008245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at MCB promoters during vegetative growth","synonyms":[{"name":"normal protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at MCB target genes during vegetative growth","type":"related"},{"name":"normal protein localization to chromatin at MCB-containing promoters during vegetative growth","type":"exact"}],"termid":"FYPO:0006739"}


id: GO:0034878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisonicotinate + acceptor + H2O = citrazinate + reduced acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisonicotinate dehydrogenase activity (obsolete GO:0034878)","termid":"GO:0034878"}


id: PBO:0086998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reverse transcriptase subunit of the telomerase holoenzyme; essential for telomerase core catalytic activity, involved in other aspects of telomerase assembly and function; mutations in human homolog are associated with aplastic anemia","termid":"PBO:0086998"}


id: GO:0046779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that discriminates against and subsequently inhibits host transcripts containing introns, thus allowing only intronless viral mRNA to be fully processed.","definition_xrefs":["PMID:11598019"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of expression of host genes with introns (obsolete GO:0046779)","synonyms":[{"name":"negative regulation by virus of expression of host genes with introns","type":"exact"},{"name":"viral inhibition of expression of host genes with introns","type":"exact"}],"termid":"GO:0046779"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: PBO:0090261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase complex catalytic subunit","termid":"PBO:0090261"}


id: PBO:0054057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1399","termid":"PBO:0054057"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: PBO:0054647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2052","termid":"PBO:0054647"}


id: GO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorylation","synonyms":[{"name":"activation of phosphorylation","type":"narrow"},{"name":"stimulation of phosphorylation","type":"narrow"},{"name":"up regulation of phosphorylation","type":"exact"},{"name":"up-regulation of phosphorylation","type":"exact"},{"name":"upregulation of phosphorylation","type":"exact"}],"termid":"GO:0042327"}


id: PBO:0032734
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replaced existing SPAC110.05 which was in the wrong frame","termid":"PBO:0032734"}


id: PBO:0028597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_UDP-N-acetylglucosamine-dolichyl-phosphate_N-acetylglucosaminephosphotransferase_activity","termid":"PBO:0028597"}


id: GO:1905101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF_miRNA","PMID:26265044","GOC:bc","GO_REF:0000058","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptosome assembly","synonyms":[{"name":"down regulation of apoptosome assembly","type":"exact"},{"name":"down regulation of apoptosome formation","type":"exact"},{"name":"down-regulation of apoptosome assembly","type":"exact"},{"name":"down-regulation of apoptosome formation","type":"exact"},{"name":"downregulation of apoptosome assembly","type":"exact"},{"name":"downregulation of apoptosome formation","type":"exact"},{"name":"inhibition of apoptosome assembly","type":"narrow"},{"name":"inhibition of apoptosome formation","type":"narrow"},{"name":"negative regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905101"}


id: PBO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation termination factor Rrf1","termid":"PBO:0003477"}


id: PBO:0064026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 60","termid":"PBO:0064026"}


id: PBO:0044398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 59, pseudogene","termid":"PBO:0044398"}


id: PBO:0064765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase G pseudogene 1","termid":"PBO:0064765"}


id: FYPO:0001823
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chlorpromazine. Cells stop growing (and may die) at a concentration of chlorpromazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to chlorpromazine","synonyms":[{"name":"hypersensitive to chlorpromazine","type":"exact"},{"name":"sensitive to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"sensitive to chlorpromazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001823"}


id: GO:0106302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-8,9-epoxyeicosatrienoic acid.","definition_xrefs":["RHEA:64984","PMID:10491410","PMID:8246128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonic acid epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonic acid 8,9-epoxygenase activity","termid":"GO:0106302"}


id: PBO:0083417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the REG2/YBR050C regulatory subunit of the Glc7p type-1 protein phosphatase","termid":"PBO:0083417"}


id: PBO:0078830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon CGG) 1-1","termid":"PBO:0078830"}


id: PBO:0069915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1207, pseudogene","termid":"PBO:0069915"}


id: PR:O14066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tax4 gene.","definition_xrefs":["UniProtKB:O14066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rDNA silencing protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.09","synonyms":[{"name":"Spom972h-tax4","type":"exact"}],"termid":"PR:O14066"}


id: PR:O42906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21231:SF1","PRO:DNx","OMA:SCHPO02574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.15","secondary_identifiers":["UniProtKB:O42906"],"synonyms":[{"name":"Spom972h-GPN1","type":"exact"}],"termid":"PR:O42906"}


id: SO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methylpseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylpseudouridine","secondary_identifiers":["RNAMOD:056"],"synonyms":[{"name":"2'-O-methylpseudouridine","type":"exact"},{"name":"Ym","type":"exact"},{"name":"two prime O methylpseudouridine","type":"exact"}],"termid":"SO:0001348"}


id: PR:Q9URW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SH3 domain-containing YSC84-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain-containing protein PJ696.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.02","secondary_identifiers":["UniProtKB:Q9URW6"],"synonyms":[{"name":"Spom972h-SH3YL1","type":"exact"}],"termid":"PR:Q9URW6"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: PBO:0058096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4312","termid":"PBO:0058096"}


id: SO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding tyrosyl tRNA (SO:000272).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine_tRNA_primary_transcript","synonyms":[{"name":"tyrosine tRNA primary transcript","type":"exact"}],"termid":"SO:0000229"}


id: PBO:0029112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_process","termid":"PBO:0029112"}


id: GO:0047463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexano-6-lactam = D-2-aminohexano-6-lactam.","definition_xrefs":["EC:5.1.1.15","RHEA:14813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"2-aminohexano-6-lactam racemase activity","secondary_identifiers":["KEGG_REACTION:R04736","MetaCyc:5.1.1.15-RXN"],"synonyms":[{"name":"2-amino-hexano-6-lactam racemase activity","type":"related"},{"name":"alpha-amino-epsilon-caprolactam racemase activity","type":"related"}],"termid":"GO:0047463"}


id: PBO:0076383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 1","termid":"PBO:0076383"}


id: PBO:0005721
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.2","termid":"PBO:0005721"}


id: PBO:0051044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-7","termid":"PBO:0051044"}


id: PBO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-13","termid":"PBO:0051280"}


id: PBO:0031585
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_G418","termid":"PBO:0031585"}


id: GO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell.","definition_xrefs":["GOC:sl","PMID:18267954","PMID:16151017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation","synonyms":[{"name":"VSMC differentiation","type":"exact"},{"name":"vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035886"}


id: PBO:0034176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_condition","termid":"PBO:0034176"}


id: PBO:0011493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Centaurin Cnt5","termid":"PBO:0011493"}


id: FYPO:0001297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal palmitoyl-CoA ligase activity","synonyms":[{"name":"abnormal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001297"}


id: PBO:0061644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 2","termid":"PBO:0061644"}


id: GO:0106357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 1-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:21412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-1-phosphate dehydrogenase [NAD(P)+] activity","termid":"GO:0050492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol-1-phosphate dehydrogenase (NAD+) activity","synonyms":[{"name":"glycerol-1-phosphate dehydrogenase [NAD+] activity","type":"exact"}],"termid":"GO:0106357"}


id: GO:0005133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II interferon receptor. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type II interferon receptor binding","synonyms":[{"name":"interferon-gamma","type":"narrow"},{"name":"interferon-gamma receptor binding","type":"exact"},{"name":"interferon-gamma receptor ligand","type":"narrow"}],"termid":"GO:0005133"}


id: PBO:0066594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member H","termid":"PBO:0066594"}


id: GO:0004788
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95624],"is_not":false,"summary":null,"term":"GO:0004788"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine = AMP + thiamine diphosphate.","definition_xrefs":["RHEA:11576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine diphosphokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196761","MetaCyc:THIAMIN-PYROPHOSPHOKINASE-RXN","EC:2.7.6.2"],"synonyms":[{"name":"ATP:thiamin pyrophosphotransferase activity","type":"related"},{"name":"ATP:thiamine diphosphotransferase activity","type":"related"},{"name":"TPTase activity","type":"related"},{"name":"thiamin diphosphokinase activity","type":"exact"},{"name":"thiamin pyrophosphokinase activity","type":"exact"},{"name":"thiamin pyrophosphotransferase activity","type":"related"},{"name":"thiamin:ATP pyrophosphotransferase activity","type":"related"},{"name":"thiamine pyrophosphokinase activity","type":"exact"},{"name":"thiaminokinase activity","type":"related"}],"termid":"GO:0004788","terms_by_termid":{"GO:0004788":null}}


id: PBO:0041494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 50","termid":"PBO:0041494"}


id: PBO:0003086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase (predicted)","termid":"PBO:0003086"}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03969","PANTHER:PTHR23115:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: FYPO:0003094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at lower levels than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased centromeric outer repeat transcript level","synonyms":[{"name":"decreased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"decreased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"decreased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"decreased centromere outer repeat transcript level","type":"exact"},{"name":"decreased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"decreased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"decreased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"decreased level of centromeric outer repeat transcripts","type":"exact"},{"name":"reduced centromeric outer repeat transcript level","type":"exact"}],"termid":"FYPO:0003094"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0069414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 675, pseudogene","termid":"PBO:0069414"}


id: PBO:0048676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucuronic acid epimerase","termid":"PBO:0048676"}


id: GO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + ADP + H+ + oxaloacetate + phosphate = ATP + citrate + CoA.","definition_xrefs":["RHEA:21160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ATP citrate synthase activity","secondary_identifiers":["KEGG_REACTION:R00352","MetaCyc:PWY-5172","EC:2.3.3.8","MetaCyc:ATP-CITRATE-PRO-S--LYASE-RXN","GO:0046913","Reactome:R-HSA-75848"],"synonyms":[{"name":"ATP citrate (pro-S)-lyase activity","type":"related"},{"name":"ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"ATP-citrate (pro-S-)-lyase activity","type":"related"},{"name":"ATP-citric lyase activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"related"},{"name":"ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"related"},{"name":"adenosine triphosphate citrate lyase activity","type":"related"},{"name":"citrate cleavage enzyme activity","type":"related"},{"name":"citrate-ATP lyase activity","type":"related"},{"name":"citric cleavage enzyme activity","type":"related"}],"termid":"GO:0003878"}


id: GO:0006502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a prenyl group to the carboxy-terminus of a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein prenylation (obsolete GO:0006502)","synonyms":[{"name":"C-terminal protein prenylation","type":"exact"}],"termid":"GO:0006502"}


id: PBO:0051534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 4","termid":"PBO:0051534"}


id: PBO:0058110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4325","termid":"PBO:0058110"}


id: GO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:ecd","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respirasome (obsolete GO:0005746)","synonyms":[{"name":"mitochondrial electron transport chain","type":"exact"},{"name":"mitochondrial respiratory chain","type":"exact"},{"name":"mitochondrial respiratory chain supercomplex","type":"exact"},{"name":"mitochondrial respiratory supercomplex","type":"exact"}],"termid":"GO:0005746"}


