# terms

id: PBO:0077343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 82","termid":"PBO:0077343"}


id: PBO:0056304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 1","termid":"PBO:0056304"}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["GO:0042125","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: PR:O42666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- but1 gene.","definition_xrefs":["UniProtKB:O42666","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uba3-binding protein but1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.12c","synonyms":[{"name":"Spom972h-but1","type":"exact"},{"name":"meiotically up-regulated gene 107 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42666"}


id: PBO:0041883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2","termid":"PBO:0041883"}


id: GO:0005721
data:
  {"annotated_genes":["SJAG_01873","SJAG_00414","SJAG_00934","SJAG_02409","SJAG_00678","SJAG_00756","SJAG_04508","SJAG_04623","SJAG_05372","SJAG_03664","SJAG_01075","SJAG_00335","SJAG_02773","SJAG_01579","SJAG_01745","SJAG_04030","SJAG_04141","SJAG_03543","SJAG_02401","SJAG_04670","SJAG_01067","SJAG_02621","SJAG_03689","SJAG_03350","SJAG_04186","SJAG_03789","SJAG_03942","SJAG_03418","SJAG_02778","SJAG_04039","SJAG_01332","SJAG_03926","SJAG_03844","SJAG_01601","SJAG_03042","SJAG_03916","SJAG_01540","SJAG_02990","SJAG_03635","SJAG_05329","SJAG_03989","SJAG_03982","SJAG_02846","SJAG_00302","SJAG_04253","SJAG_04412","SJAG_02119","SJAG_03997","SJAG_03945","SJAG_02866","SJAG_04574","SJAG_01046","SJAG_02927","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83784,84009,85485,86170,87033,87372,87444,87512,87887,88170,88475,89932,90180,90196,92260,92830,95056,95215,95653,95701,97927,98094,98095,98096,98871,99319,100184,100279,102371,102615,103405,103900,104237,106558,107282,108177,108282,108678,108679,108680,109135,109303,109363,109744,110350,110488,110633,112048,112931,113181,113743,113753,113799,114127,114599,114731,114852],"is_not":false,"summary":null,"term":"GO:0005721"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:12019236","PMID:21437270","PMID:20206496","PMID:9413993","PMID:22729156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01745":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02621":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03350":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03689":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04253":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"pericentric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034507","GO:0062199","GO:0002137","GO:0031618"],"synonyms":[{"name":"centric heterochromatin","type":"exact"},{"name":"centromeric heterochromatin","type":"exact"},{"name":"chromosome, centric outer repeat region","type":"related"},{"name":"chromosome, centromeric inner repeat region","type":"related"},{"name":"chromosome, centromeric outer repeat region","type":"related"},{"name":"nuclear centric heterochromatin","type":"narrow"},{"name":"nuclear cluster","type":"narrow"},{"name":"nuclear pericentric heterochromatin","type":"narrow"}],"termid":"GO:0005721","terms_by_termid":{"GO:0005721":null}}


id: GO:0036472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interaction between host proteins.","definition_xrefs":["PMID:17297443","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein-protein interaction (obsolete GO:0036472)","synonyms":[{"name":"suppression by virus of host protein binding","type":"exact"},{"name":"suppression by virus of host protein interaction","type":"exact"},{"name":"suppression by virus of host protein:protein binding","type":"exact"},{"name":"suppression by virus of host protein:protein interaction","type":"exact"}],"termid":"GO:0036472"}


id: PBO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit (predicted)","termid":"PBO:0002168"}


id: GO:0106318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methane + NADPH + H+ + O2 = methanol + NADP+ + H2O.","definition_xrefs":["RHEA:13641"],"gene_count":0,"genotype_count":0,"name":"obsolete methane monooxygenase NADPH activity (obsolete GO:0106318)","termid":"GO:0106318"}


id: GO:0022414
data:
  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id: PBO:0083298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 3' end of essential PRP21 gene encoding a subunit of the SF3a splicing factor complex","termid":"PBO:0083298"}


id: GO:0007504
data:
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id: GO:0005363
data:
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id: GO:0072499
data:
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id: PBO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase","termid":"PBO:0090081"}


id: PATO:0002007
data:
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id: PBO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 13 (pseudogene)","termid":"PBO:0045602"}


id: PR:C6Y4A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23D3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.17","synonyms":[{"name":"Spom972h-SPAC23D3.17","type":"exact"}],"termid":"PR:C6Y4A9"}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: GO:0031074
data:
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id: GO:0048519
data:
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id: PBO:0077835
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id: PBO:0047759
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id: PBO:0013776
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id: GO:1904778
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id: GO:1905111
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id: GO:0072003
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id: PBO:0070207
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id: PBO:0038576
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id: PBO:0052254
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id: GO:0050116
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id: PBO:0080313
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id: PBO:0005067
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id: PBO:0075852
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id: FYPO:0007898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the length of actin filaments in the contractile ring is shorter than normal.","definition_xrefs":["PMID:34613787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"decreased actomyosin contractile ring actin filament length","termid":"FYPO:0007898"}


id: FYPO:0001752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased homocitrate synthase activity","synonyms":[{"name":"reduced homocitrate synthase activity","type":"exact"}],"termid":"FYPO:0001752"}


id: GO:0033832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + phosphate = alpha-D-glucose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"alpha,alpha-trehalose phosphorylase (configuration-retaining) activity","secondary_identifiers":["MetaCyc:RXN-4441","RHEA:16257"],"synonyms":[{"name":"alpha,alpha-trehalose:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"trehalose phosphorylase activity","type":"broad"}],"termid":"GO:0033832"}


id: FYPO:0004751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of G418 than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to G418","synonyms":[{"name":"resistance to G418 during mitotic cell cycle","type":"related"},{"name":"resistance to G418 during vegetative growth","type":"exact"},{"name":"resistance to Geneticin","type":"exact"},{"name":"resistant to G418","type":"exact"}],"termid":"FYPO:0004751"}


id: GO:0016205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: selenocysteine + S-adenosyl-L-methionine = Se-methylselenocysteine + S-adenosyl-homocysteine.","definition_xrefs":["EC:2.1.1.280","PMID:10026151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Se-methyltransferase activity","termid":"GO:0051995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"selenocysteine methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11061","RHEA:26341"],"termid":"GO:0016205"}


id: PBO:0050705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 2","termid":"PBO:0050705"}


id: GO:0043291
data:
  {"annotated_genes":["SJAG_03219","SJAG_00301","SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98077,106240,106396],"is_not":false,"summary":null,"term":"GO:0043291"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that in Saccharomyces is composed of three subunits, Rav1p, Rav2p and Skp1p. Acts transiently to catalyze assembly of cytoplasmic V1, with membrane embedded V0 to form the V-ATPase holoenzyme.","definition_xrefs":["PMID:11283612","PMID:11844802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_03219":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"RAVE complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulator of the (H+)-ATPase of the vacuolar and endosomal membranes","type":"broad"}],"termid":"GO:0043291","terms_by_termid":{"GO:0043291":null}}


id: PBO:0058047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4268","termid":"PBO:0058047"}


id: PR:Q9UT24
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U5 small nuclear ribonucleoprotein 200 kDa helicase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11752:SF7","OMA:SCHPO00590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor brr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.03c","secondary_identifiers":["UniProtKB:Q9UT24"],"synonyms":[{"name":"Spom972h-SNRNP200","type":"exact"},{"name":"pre-mRNA-splicing factor spp41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pre-mRNA-splicing helicase BRR2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT24"}


id: PBO:0091906
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human AGO2","termid":"PBO:0091906"}


id: GO:0039657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:1582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host gene expression","synonyms":[{"name":"host gene expression shutoff","type":"exact"},{"name":"host gene expression shutoff by virus","type":"narrow"},{"name":"suppression by virus of host gene expression","type":"narrow"}],"termid":"GO:0039657"}


id: GO:0034216
data:
  {"annotated_genes":["SJAG_04673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96775],"is_not":false,"summary":null,"term":"GO:0034216"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: thiamine(out) + H+(out) = thiamine(in) + H+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine:proton symporter activity","termid":"GO:0034215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity thiamine:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:hydrogen symporter activity","type":"exact"},{"name":"high-affinity thiamin:proton symporter activity","type":"exact"},{"name":"high-affinity thiamine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0034216","terms_by_termid":{"GO:0034216":null}}


id: GO:0032193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, via the intermediates 2-polyprenylphenol and 2-polyprenyl-6-hydroxyphenol.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0006744","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ubiquinone biosynthetic process via 2-polyprenylphenol","termid":"GO:0032193"}


id: GO:0008521
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102777],"is_not":false,"summary":null,"term":"GO:0008521"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetyl-CoA from one side of a membrane to the other. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","termid":"GO:0071077"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"acetyl-CoA transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5649742","Reactome:R-HSA-727759"],"synonyms":[{"name":"acetyl-CoA transporter activity","type":"related"}],"termid":"GO:0008521","terms_by_termid":{"GO:0008521":null}}


id: PBO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member B","termid":"PBO:0046928"}


id: GO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"M-CSF receptor binding","type":"exact"},{"name":"macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005157"}


id: PBO:0067462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 587, pseudogene","termid":"PBO:0067462"}


id: GO:1905047
data:
  {"annotated_genes":["SJAG_04745","SJAG_00794","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91414,74629,90873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905047","terms_by_termid":{"GO:0000073":null}}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: PBO:0058685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6813","termid":"PBO:0058685"}


id: _global:directly_negatively_regulates_activity_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"The entity A, immediately upstream of the entity B, has an activity that negatively regulates an activity performed by B. \\nFor example, A and B may be gene products and binding of B by A negatively regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulates_activity_of","termid":"_global:directly_regulates_activity_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulates_activity_of","secondary_identifiers":["RO:0002449"],"synonyms":[{"name":"molecularly decreases activity of","type":"exact"}],"termid":"_global:directly_negatively_regulates_activity_of"}


id: GO:0060592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process pertaining to the initial formation of the mammary gland from unspecified parts. The process begins with formation of the mammary line and ends when the solid mammary bud invades the primary mammary mesenchyme.","definition_xrefs":["PMID:16168142","PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland formation","synonyms":[{"name":"mammary bud formation","type":"related"},{"name":"mammary line formation","type":"narrow"},{"name":"mammary placode formation","type":"narrow"},{"name":"mammary sprout formation","type":"related"}],"termid":"GO:0060592"}


id: GO:0051110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation, to form peptidyl-1'-(phospho-5'-uridine)-L-histidine","termid":"GO:0051110"}


id: GO:0048801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the antennal joint are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"antennal joint development","termid":"GO:0048098"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal joint morphogenesis","termid":"GO:0048801"}


id: PBO:0026721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oligomerization","termid":"PBO:0026721"}


id: GO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the sensory perception of pain in the bitten organism.","definition_xrefs":["PMID:23034652","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of sensory perception of pain in another organism","synonyms":[{"name":"envenomation resulting in modulation of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044742"}


id: PBO:0055519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2953","termid":"PBO:0055519"}


id: PBO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC1 antisense RNA 1","termid":"PBO:0052434"}


id: GO:0007522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the visceral muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visceral muscle development","termid":"GO:0007522"}


id: GO:1902395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-deoxy-D-xylulose-5-phosphate synthase activity.","definition_xrefs":["GOC:TermGenie","PMID:23612965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity","synonyms":[{"name":"regulation of 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"regulation of 1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"regulation of DOXP synthase activity","type":"exact"},{"name":"regulation of DXP-synthase activity","type":"exact"},{"name":"regulation of pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"exact"}],"termid":"GO:1902395"}


id: PBO:0068586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 37, pseudogene","termid":"PBO:0068586"}


id: PBO:0061050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL4 divergent transcript","termid":"PBO:0061050"}


id: GO:0036183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"asperthecin catabolic process","synonyms":[{"name":"asperthecin breakdown","type":"exact"},{"name":"asperthecin catabolism","type":"exact"},{"name":"asperthecin degradation","type":"exact"}],"termid":"GO:0036183"}


id: PBO:0074653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41","termid":"PBO:0074653"}


id: GO:0004860
data:
  {"annotated_genes":["SJAG_01821","SJAG_01210","SJAG_01245","SJAG_01118","SJAG_03931"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103092,111384],"is_not":false,"summary":null,"term":"GO:0004860"},{"annotations":[96539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[104486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase inhibitor activity","termid":"GO:0019210"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01118":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01821":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0004857","GO:0003674","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"protein kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004860","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: GO:1903101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["GOC:TermGenie","PMID:19037259","GO_REF:0000068","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol catabolic process","termid":"GO:0031161"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate breakdown","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate catabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1903101"}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91395,101225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: GO:1903123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thioredoxin peroxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thioredoxin peroxidase activity","synonyms":[{"name":"regulation of TPx activity","type":"exact"},{"name":"regulation of TrxPx activity","type":"exact"},{"name":"regulation of thiol peroxidase activity","type":"exact"}],"termid":"GO:1903123"}


id: FYPO:0000361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the nucleolus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal nucleolus organization","termid":"FYPO:0000814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleolar morphology","synonyms":[{"name":"abnormal nucleolar morphology during mitotic cell cycle","type":"related"},{"name":"abnormal nucleolar morphology during vegetative growth","type":"exact"},{"name":"nucleolar morphology: abnormal","type":"related"}],"termid":"FYPO:0000361"}


id: MOD:00119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["RESID:AA0110#CSX","DeltaMass:7","ChEBI:21347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lanthionine","termid":"MOD:01839"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lanthionine (Cys-Ser)","synonyms":[{"name":"(2R,2'R)-3,3'-sulfanediylbis(2-aminopropanoic acid)","type":"exact"},{"name":"(R)-S-(2-amino-2-carboxyethyl)-L-cysteine","type":"exact"},{"name":"(R,R)-2,6-diamino-4-thiaheptanedioic acid","type":"exact"},{"name":"(R,R)-3,3'-thiobis-(2-aminopropanoic acid)","type":"exact"},{"name":"(R,R)-bis(2-amino-2-carboxyethyl)sulfide","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethyl)sulfanylpropanoic acid","type":"exact"},{"name":"3,3'-thiobis-L-alanine","type":"exact"},{"name":"L-lanthionine","type":"exact"},{"name":"XLNK-SCys-(L)3Dha","type":"exact"}],"termid":"MOD:00119"}


id: PBO:0081054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC10 pseudogene 2","termid":"PBO:0081054"}


id: PBO:0058618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6750","termid":"PBO:0058618"}


id: PBO:0028203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028203"}


id: PBO:0060762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 6","termid":"PBO:0060762"}


id: GO:0097223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm part (obsolete GO:0097223)","termid":"GO:0097223"}


id: PBO:0055080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2498","termid":"PBO:0055080"}


id: GO:1901167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chlorocatechol.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol metabolic process","synonyms":[{"name":"3-chlorocatechol metabolism","type":"exact"}],"termid":"GO:1901167"}


id: GO:0004834
data:
  {"annotated_genes":["SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87678],"is_not":false,"summary":null,"term":"GO:0004834"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["RHEA:10532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tryptophan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.2.1.20","KEGG_REACTION:R02722","MetaCyc:TRYPSYN-RXN"],"synonyms":[{"name":"L-serine hydro-lyase (adding indoleglycerol-phosphate)","type":"related"},{"name":"L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]","type":"related"},{"name":"L-tryptophan synthetase activity","type":"related"},{"name":"indoleglycerol phosphate aldolase activity","type":"related"},{"name":"tryptophan desmolase activity","type":"related"},{"name":"tryptophan synthetase activity","type":"related"}],"termid":"GO:0004834","terms_by_termid":{"GO:0004834":null}}


id: GO:0034095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of sister chromatid cohesion","termid":"GO:0034092"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"}


id: PBO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15","termid":"PBO:0090155"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0067750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 49","termid":"PBO:0067750"}


id: PBO:0029253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_DNA_replication_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029253"}


id: PBO:0071794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40","termid":"PBO:0071794"}


id: GO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a peptidyl-tyrosine residue by the formation of O4'-(phospho-3'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0323"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking via the 3'-end to peptidyl-tyrosine (obsolete GO:0045326)","synonyms":[{"name":"DNA-protein covalent cross-linking via the 3'-end to peptidyl-tyrosine","type":"exact"}],"termid":"GO:0045326"}


id: PBO:0039090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase","termid":"PBO:0039090"}


id: PBO:0069587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 861, pseudogene","termid":"PBO:0069587"}


id: PBO:0053985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1301","termid":"PBO:0053985"}


id: PBO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FaScilin domain Containing","termid":"PBO:0017549"}


id: PBO:0046272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomucin","termid":"PBO:0046272"}


id: FYPO:0007673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which invertase activity (beta-fructofuranosidase activity) is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished invertase activity","synonyms":[{"name":"abolished beta-fructofuranosidase activity","type":"exact"},{"name":"invertase activity abolished","type":"exact"}],"termid":"FYPO:0007673"}


id: GO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-A RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-A RNA polymerase activity (obsolete GO:0001062)","termid":"GO:0001062"}


id: GO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071181"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: PBO:0080394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 retromer complex component B","termid":"PBO:0080394"}


id: PBO:0052887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-10, pseudogene","termid":"PBO:0052887"}


id: GO:1901024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxyphenylacetate.","definition_xrefs":["GOC:yaf","MetaCyc:RXN-8505","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"4-hydroxyphenylacetate metabolic process","termid":"GO:1901022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyphenylacetate biosynthetic process","synonyms":[{"name":"4-hydroxyphenylacetate anabolism","type":"exact"},{"name":"4-hydroxyphenylacetate biosynthesis","type":"exact"},{"name":"4-hydroxyphenylacetate formation","type":"exact"},{"name":"4-hydroxyphenylacetate synthesis","type":"exact"}],"termid":"GO:1901024"}


id: MOD:01687
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an alpha-aminium group with a trimethylaminium group.","definition_xrefs":["Unimod:37#N-term","OMSSA:12"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"alpha-amino protonated residue","termid":"MOD:01700"},{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated residue","synonyms":[{"name":"N2Me3Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"ntermtrimethyl","type":"exact"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01687"}


id: PBO:0028955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_germinated_spores_and_small_cells_(obsolete_FYPO:0002846)","termid":"PBO:0028955"}


id: GO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rubidium ions (Rb+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete rubidium ion transport (obsolete GO:0035826)","synonyms":[{"name":"Rb+ transport","type":"exact"},{"name":"rubidium cation transport","type":"exact"}],"termid":"GO:0035826"}


id: PBO:0090920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase Guk1","termid":"PBO:0090920"}


id: PBO:0046903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member B, pseudogene","termid":"PBO:0046903"}


id: GO:0031953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"negatively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autophosphorylation","synonyms":[{"name":"down regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"downregulation of protein amino acid autophosphorylation","type":"exact"},{"name":"inhibition of protein amino acid autophosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031953"}


id: PBO:0049288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 7, pseudogene","termid":"PBO:0049288"}


id: GO:0034181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 13 signaling pathway","termid":"GO:0034179"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"positive regulation of TLR13 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034181"}


id: PBO:0046245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 2","termid":"PBO:0046245"}


id: GO:0021795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the cerebral cortex.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex cell migration","termid":"GO:0021795"}


id: GO:1903710
data:
  {"annotated_genes":["SJAG_02059","SJAG_02344","SJAG_02060"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68006,105520,105526,105532,106426,107009,113406],"is_not":false,"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which spermine is transported across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:15637075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermine transport","termid":"GO:0000296"},{"relation_name":"is_a","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"spermine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903710","terms_by_termid":{"GO:1903710":null}}


id: PBO:0081293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75B, pseudogene","termid":"PBO:0081293"}


id: PBO:0076642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta regulator 1","termid":"PBO:0076642"}


id: PBO:0040508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin","termid":"PBO:0040508"}


id: PBO:0079058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 13-1","termid":"PBO:0079058"}


id: GO:0071022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed following the second splicing event and contains the spliced product, the excised intron, and three snRNPs, U5, U12 and U6atac.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"post-spliceosomal complex","termid":"GO:0071020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U12-type post-spliceosomal complex","synonyms":[{"name":"AT-AC post-spliceosomal complex","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C2","type":"narrow"},{"name":"minor post-spliceosomal complex","type":"exact"},{"name":"yeast U12-type spliceosomal complex A2-3","type":"narrow"}],"termid":"GO:0071022"}


id: PBO:0067420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 538, pseudogene","termid":"PBO:0067420"}


id: GO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010746"}


id: GO:2001296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega)-methyl-L-arginine.","definition_xrefs":["GOC:rs","PMID:10510241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"N(omega)-methyl-L-arginine metabolic process","synonyms":[{"name":"N(omega)-methyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001296"}


id: FYPO:0003710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"swollen pear-shaped vegetative cell","synonyms":[{"name":"swollen ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003710"}


id: PBO:0053225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"legumain","termid":"PBO:0053225"}


id: GO:1900861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"}


id: GO:0034965
data:
  {"annotated_genes":["SJAG_01369","SJAG_03234","SJAG_06613","SJAG_02553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87194,100854,109562,111371],"is_not":false,"summary":null,"term":"GO:0034965"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box C/D type small nucleolar RNA (snoRNA) transcript that resides within, and is processed from, the intron of a pre-mRNA into a mature box C/D snoRNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intronic snoRNA processing","termid":"GO:0031070"},{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01369":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"intronic box C/D snoRNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034965","terms_by_termid":{"GO:0034965":null}}


id: GO:0036424
data:
  {"annotated_genes":["SJAG_04964","SJAG_04449"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96361,106220],"is_not":false,"summary":null,"term":"GO:0036424"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-serine + H2O = L-serine + phosphate, on a free amino acid.","definition_xrefs":["PMID:25037224","PMID:9188776","RHEA:21208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"L-phosphoserine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00582","GO:0004647","EC:3.1.3.3","MetaCyc:PSERPHOSPHA-RXN","MetaCyc:RXN0-5114","Reactome:R-HSA-977324"],"synonyms":[{"name":"O-phosphoserine phosphohydrolase activity","type":"related"},{"name":"phosphoserine phosphatase activity","type":"related"}],"termid":"GO:0036424","terms_by_termid":{"GO:0036424":null}}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: GO:0019393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucarate, the anion of glucaric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"},{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucarate biosynthetic process","synonyms":[{"name":"glucarate anabolism","type":"exact"},{"name":"glucarate biosynthesis","type":"exact"},{"name":"glucarate formation","type":"exact"},{"name":"glucarate synthesis","type":"exact"}],"termid":"GO:0019393"}


id: PBO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 9","termid":"PBO:0040021"}


id: GO:1901712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of homoserine biosynthetic process","synonyms":[{"name":"activation of homoserine anabolism","type":"exact"},{"name":"activation of homoserine biosynthesis","type":"exact"},{"name":"activation of homoserine biosynthetic process","type":"narrow"},{"name":"activation of homoserine formation","type":"exact"},{"name":"activation of homoserine synthesis","type":"exact"},{"name":"positive regulation of homoserine anabolism","type":"exact"},{"name":"positive regulation of homoserine biosynthesis","type":"exact"},{"name":"positive regulation of homoserine formation","type":"exact"},{"name":"positive regulation of homoserine synthesis","type":"exact"},{"name":"up regulation of homoserine anabolism","type":"exact"},{"name":"up regulation of homoserine biosynthesis","type":"exact"},{"name":"up regulation of homoserine biosynthetic process","type":"exact"},{"name":"up regulation of homoserine formation","type":"exact"},{"name":"up regulation of homoserine synthesis","type":"exact"},{"name":"up-regulation of homoserine anabolism","type":"exact"},{"name":"up-regulation of homoserine biosynthesis","type":"exact"},{"name":"up-regulation of homoserine biosynthetic process","type":"exact"},{"name":"up-regulation of homoserine formation","type":"exact"},{"name":"up-regulation of homoserine synthesis","type":"exact"},{"name":"upregulation of homoserine anabolism","type":"exact"},{"name":"upregulation of homoserine biosynthesis","type":"exact"},{"name":"upregulation of homoserine biosynthetic process","type":"exact"},{"name":"upregulation of homoserine formation","type":"exact"},{"name":"upregulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901712"}


id: PBO:0048524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein overexpressed in skeletal muscle","termid":"PBO:0048524"}


id: GO:0022014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The division of a radial glial cell in the subpallium. A radial glial cell is a precursor cell that gives rise to neurons and astrocytes.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete radial glial cell division in subpallium (obsolete GO:0022014)","termid":"GO:0022014"}


id: PR:O74475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bgs4 gene.","definition_xrefs":["UniProtKB:O74475","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase component bgs4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.02c","synonyms":[{"name":"1,3-beta-D-glucan-UDP glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bgs4","type":"exact"}],"termid":"PR:O74475"}


id: PBO:0053987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1304","termid":"PBO:0053987"}


id: PBO:0054677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2084","termid":"PBO:0054677"}


id: PBO:0083183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the tRNA ORF tI(AAU)N2","termid":"PBO:0083183"}


id: PBO:0030525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_premeiotic_DNA_replication","termid":"PBO:0030525"}


id: GO:0097198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 36 of the histone.","definition_xrefs":["GOC:se","PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 trimethylation (obsolete GO:0097198)","termid":"GO:0097198"}


id: GO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticosterone into the circulatory system. Corticosterone is a 21-carbon steroid hormone of the corticosteroid type produced in the cortex of the adrenal glands.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"corticosterone secretion","termid":"GO:0035934"}


id: PBO:0066673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras like without CAAX 2","termid":"PBO:0066673"}


id: PBO:0062475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 3","termid":"PBO:0062475"}


id: GO:0071160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-Asp(4-L-Arg)]n + L-Asp = ADP + phosphate + [L-Asp(4-L-Arg)]n-L-Asp.","definition_xrefs":["EC:6.3.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyanophycin synthetase activity","termid":"GO:0043860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cyanophycin synthetase activity (L-aspartate-adding)","secondary_identifiers":["RHEA:13277"],"termid":"GO:0071160"}


id: GO:0031810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H4 histamine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled histamine receptor binding","termid":"GO:0031806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"H4 histamine receptor binding","synonyms":[{"name":"H4 histamine receptor ligand","type":"narrow"}],"termid":"GO:0031810"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: PBO:0081318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101 pseudogene 1","termid":"PBO:0081318"}


id: PR:O14249
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin-specific deacylase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.03c","secondary_identifiers":["UniProtKB:O14249"],"synonyms":[{"name":"Spom972h-ABHD4","type":"exact"}],"termid":"PR:O14249"}


id: PBO:0077117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 29","termid":"PBO:0077117"}


id: SO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a proplastid such as an immature chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_sequence","synonyms":[{"name":"proplastid sequence","type":"exact"}],"termid":"SO:0000748"}


id: PATO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure which does not deteriorate.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-degenerate","synonyms":[{"name":"not degenerate","type":"exact"}],"termid":"PATO:0002038"}


id: GO:0033209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by tumor necrosis factor binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to tumor necrosis factor","termid":"GO:0071356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"adipocytokine signaling pathway","type":"related"},{"name":"tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0033209"}


id: FYPO:0008011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is abolished.","definition_xrefs":["PMID:15615848","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA localization","termid":"FYPO:0000366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished siRNA loading onto RITS complex","synonyms":[{"name":"abolished recruitment of siRNA onto RITS complex","type":"exact"},{"name":"decreased siRNA localization to RITS complex","type":"exact"}],"termid":"FYPO:0008011"}


id: PBO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLucoSidase","termid":"PBO:0001186"}


id: PBO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily C member 1","termid":"PBO:0044483"}


id: GO:0034994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microtubule organizing center attachment site. A microtubule organizing center attachment site is a region of the nuclear envelope to which a microtubule organizing center (MTOC) attaches.","definition_xrefs":["GOC:mah","PMID:18692466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"nuclear envelope organization","termid":"GO:0006998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"microtubule organizing center attachment site organization","synonyms":[{"name":"MAS organization","type":"exact"},{"name":"MTOC attachment site organization","type":"exact"},{"name":"microtubule organising centre attachment site organisation","type":"related"}],"termid":"GO:0034994"}


id: GO:0046455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organosilicons, any organic compound that contains silicon.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"organosilicon catabolic process","synonyms":[{"name":"organosilicon breakdown","type":"exact"},{"name":"organosilicon catabolism","type":"exact"},{"name":"organosilicon degradation","type":"exact"},{"name":"organosilicone catabolic process","type":"exact"},{"name":"organosilicone catabolism","type":"exact"}],"termid":"GO:0046455"}


id: GO:2000690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast differentiation","termid":"GO:0045661"},{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"regulation of cardiac myoblast differentiation","type":"related"},{"name":"regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000690"}


id: PBO:0113163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of Las17p-mediated Arp2/3 complex activation; F-BAR protein that directly inhibits Las17p stimulation of Arp2/3 complex-mediated actin assembly in vitro; involved in formation of the endocytic site; intrinsically disordered domain induces bundling of Cdc11p-capped septin filaments to promote septin collar assembly, similar to mammalian ortholog FCHo2; localizes to sites of polarized growth, the septin ring, and endocytic patches; involved in actin cytoskeletal organization","termid":"PBO:0113163"}


id: FYPO:0002190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable swollen spheroid vegetative cell","synonyms":[{"name":"inviable enlarged spheroid vegetative cell","type":"related"},{"name":"inviable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"inviable large spheroid vegetative cell","type":"related"},{"name":"inviable swollen rounded vegetative cell","type":"exact"},{"name":"inviable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"inviable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable, increased spheroid vegetative cell size","type":"related"},{"name":"inviable, increased spheroid vegetative cell volume","type":"exact"},{"name":"lethal; swollen spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002190"}


id: PBO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxyphenylpyruvate dioxygenase","termid":"PBO:0050531"}


id: GO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["PMID:11483596","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043012"}


id: GO:0051238
data:
  {"annotated_genes":["SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"}]},"cv_name":"biological_process","definition":"The process of binding or confining metal ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location","termid":"GO:0051235"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sequestering of metal ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metal ion retention","type":"exact"},{"name":"metal ion sequestering","type":"exact"},{"name":"metal ion sequestration","type":"exact"},{"name":"metal ion storage","type":"exact"},{"name":"retention of metal ion","type":"exact"},{"name":"sequestration of metal ion","type":"exact"},{"name":"storage of metal ion","type":"exact"}],"termid":"GO:0051238","terms_by_termid":{"GO:0006880":null}}


id: GO:0097391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 13 (CXCL13) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 13 production","synonyms":[{"name":"CXCL13 production","type":"exact"}],"termid":"GO:0097391"}


id: PBO:0036406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folylpolyglutamate synthase Met7 (predicted)","termid":"PBO:0036406"}


id: GO:1900034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to heat","synonyms":[{"name":"regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900034"}


id: PBO:0075523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E3","termid":"PBO:0075523"}


id: PBO:0082586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes","termid":"PBO:0082586"}


id: GO:1990161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; functions during DNA replication and repair.","definition_xrefs":["GOC:bhm","PMID:17947583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaB helicase complex","synonyms":[{"name":"DnaB hexamer","type":"exact"}],"termid":"GO:1990161"}


id: PBO:0040336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 2","termid":"PBO:0040336"}


id: PBO:0086243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain","termid":"PBO:0086243"}


id: GO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-glutamate + H2O = L-glutamate + formate.","definition_xrefs":["EC:3.5.1.68","RHEA:12476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-formylglutamate deformylase activity","secondary_identifiers":["MetaCyc:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN","KEGG_REACTION:R00525"],"synonyms":[{"name":"N-formyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N-formylglutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidohydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate-hydrolyzing enzyme","type":"related"},{"name":"beta-citrylglutamate amidase activity","type":"related"},{"name":"formylglutamate deformylase activity","type":"related"}],"termid":"GO:0050129"}


id: PBO:0078905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 14-1","termid":"PBO:0078905"}


id: GO:1902941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of voltage-gated chloride channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22006324","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"is_a","term_name":"regulation of chloride transport","termid":"GO:2001225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of voltage-gated chloride channel activity","synonyms":[{"name":"regulation of voltage gated chloride channel activity","type":"exact"},{"name":"regulation of voltage-dependent chloride channel activity","type":"exact"}],"termid":"GO:1902941"}


id: GO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubulo-vesicular structure located in the apical cytoplasm that participates in apical cargo recycling in polarized epithelial cells.","definition_xrefs":["PMID:17494872","PMID:16394106","PMID:12669082","PMID:21170358","PMID:9405315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"part_of","term_name":"apical cytoplasm","termid":"GO:0090651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"apical recycling endosome","termid":"GO:0090653"}


id: GO:0048373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"lateral mesodermal cell fate commitment","termid":"GO:0048372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate determination","synonyms":[{"name":"lateral mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048373"}


id: PBO:0084162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved ATPase of HSP70/DnaK family; essential functional component of the EKC/KEOPS complex, with Bud32p, Cgi121p, Pcc1p, and Gon7p; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription","termid":"PBO:0084162"}


id: PBO:0076773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 15","termid":"PBO:0076773"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88072],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: PBO:0075294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33","termid":"PBO:0075294"}


id: GO:0019306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-D-rhamnose metabolic process","termid":"GO:0046382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-D-rhamnose biosynthetic process","secondary_identifiers":["MetaCyc:GDPRHAMSYN-PWY"],"synonyms":[{"name":"GDP-D-rhamnose anabolism","type":"exact"},{"name":"GDP-D-rhamnose biosynthesis","type":"exact"},{"name":"GDP-D-rhamnose formation","type":"exact"},{"name":"GDP-D-rhamnose synthesis","type":"exact"}],"termid":"GO:0019306"}


id: PBO:0062518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 4 pseudogene","termid":"PBO:0062518"}


id: PBO:0039345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aly/REF export factor","termid":"PBO:0039345"}


id: GO:0015044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced rubredoxin + NAD+ = oxidized rubredoxin + NADH + H+.","definition_xrefs":["RHEA:18597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)+ reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rubredoxin-NAD+ reductase activity","secondary_identifiers":["MetaCyc:RUBREDOXIN--NAD+-REDUCTASE-RXN","EC:1.18.1.1"],"synonyms":[{"name":"DPNH-rubredoxin reductase activity","type":"related"},{"name":"NADH--rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH--rubredoxin reductase activity","type":"related"},{"name":"NADH:rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH:rubredoxin reductase activity","type":"exact"},{"name":"dihydronicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"rubredoxin--NAD reductase activity","type":"related"},{"name":"rubredoxin--nicotinamide adenine dinucleotide reductase activity","type":"related"},{"name":"rubredoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0015044"}


id: CHEBI:58088
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3-phosphate(3-)","termid":"CHEBI:58088"}


id: GO:0044445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic part (obsolete GO:0044445)","synonyms":[{"name":"cytosol component","type":"exact"}],"termid":"GO:0044445"}


id: PBO:0067436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 557, pseudogene","termid":"PBO:0067436"}


id: GO:0021964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the red nucleus of the midbrain towards target cells in the spinal cord.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rubrospinal tract morphogenesis","termid":"GO:0021964"}


id: PBO:0061199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOBOX oogenesis homeobox","termid":"PBO:0061199"}


id: GO:0070819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + menaquinone = protoporphyrin IX + reduced menaquinone.","definition_xrefs":["PMID:19583219","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"},{"relation_name":"is_a","term_name":"protoporphyrinogen oxidase activity","termid":"GO:0070818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"menaquinone-dependent protoporphyrinogen oxidase activity","synonyms":[{"name":"protoporphyrinogen-IX:menaquinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070819"}


id: PBO:0062362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily V member 1","termid":"PBO:0062362"}


id: PATO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000291 relative respiratory rate (obsolete PATO:0000291)","termid":"PATO:0000291"}


id: GO:1905642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA methylation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:27336847","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA methylation (obsolete GO:1905642)","synonyms":[{"name":"down regulation of DNA methylation","type":"exact"},{"name":"down-regulation of DNA methylation","type":"exact"},{"name":"downregulation of DNA methylation","type":"exact"},{"name":"inhibition of DNA methylation","type":"narrow"}],"termid":"GO:1905642"}


id: PBO:0026704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tyrosine_level","termid":"PBO:0026704"}


id: GO:0120508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the reaction of GTP and mannose-1-phosphate to form GDP-mannose. The complex is a homodimer in most bacteria and a heterodimer in most eukaryotes. In humans, it is composed of a catalytic beta subunit (GMPPB) and a regulatory alpha subunit (GMPPA).","definition_xrefs":["PMID:33986552","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase complex","synonyms":[{"name":"GMPPA-GMPPB complex","type":"exact"}],"termid":"GO:0120508"}


id: PBO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 26","termid":"PBO:0071485"}


id: PBO:0052389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF26B antisense RNA 1","termid":"PBO:0052389"}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:23575248","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: _global:guides
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guides","termid":"_global:guides"}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: GO:0140195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway involved in heart process (obsolete GO:0140195)","termid":"GO:0140195"}


id: GO:0021587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum morphogenesis","termid":"GO:0021587"}


id: PATO:0002416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Flattened from above downward; below the normal level or the level of the surrounding parts.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sunken","termid":"PATO:0002416"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: GO:1904670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actin filament polymerization that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:24127216"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament polymerization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1904670)","termid":"GO:1904670"}


id: PBO:0086642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene","termid":"PBO:0086642"}


id: PBO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase family","termid":"PBO:0000250"}


id: PBO:0089855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15","termid":"PBO:0089855"}


id: GO:2000286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor internalization process that contributes to canonical Wnt signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:16890161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"},{"relation_name":"part_of","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0023052","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"receptor internalization involved in canonical Wnt signaling pathway","synonyms":[{"name":"receptor internalization involved in Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"receptor internalization involved in Wnt receptor signaling pathway via beta-catenin","type":"exact"},{"name":"receptor internalization involved in Wnt receptor signalling pathway through beta-catenin","type":"exact"},{"name":"receptor internalization involved in canonical Wnt receptor signaling pathway","type":"exact"},{"name":"receptor internalization involved in canonical Wnt receptor signalling pathway","type":"exact"},{"name":"receptor internalization involved in canonical Wnt-activated signaling pathway","type":"exact"},{"name":"receptor internalization involved in frizzled-1 receptor signaling pathway","type":"related"}],"termid":"GO:2000286"}


id: PBO:0053470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 434","termid":"PBO:0053470"}


id: GO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTDP + H+ + phosphate.","definition_xrefs":["RHEA:19013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"TTPase activity","secondary_identifiers":["MetaCyc:THYMIDINE-TRIPHOSPHATASE-RXN","EC:3.6.1.39"],"synonyms":[{"name":"dTTP nucleotidohydrolase activity","type":"related"},{"name":"dTTPase activity","type":"related"},{"name":"deoxythymidine-5'-triphosphatase activity","type":"related"},{"name":"thymidine triphosphatase activity","type":"exact"},{"name":"thymidine triphosphate nucleotidohydrolase activity","type":"related"},{"name":"thymidine-triphosphatase activity","type":"exact"}],"termid":"GO:0050339"}


id: PBO:0044429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 11","termid":"PBO:0044429"}


id: FYPO:0005514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuole is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to vacuole","synonyms":[{"name":"ectopic protein localization to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole","type":"exact"},{"name":"protein mislocalised to vacuole during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0005514"}


id: PBO:0074889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 65B","termid":"PBO:0074889"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: RO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A biotic interaction relationship in which one partner is an organism and the other partner is inorganic. For example, the relationship between a sponge and the substrate to which is it anchored.","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"RO:0002437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_abiotic-biotic_interaction_with","synonyms":[{"name":"semibiotically interacts with","type":"related"}],"termid":"RO:0002446"}


id: GO:1990089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["PMID:22399805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nerve growth factor","synonyms":[{"name":"response to nerve growth factor stimulus","type":"exact"}],"termid":"GO:1990089"}


id: FYPO:0005217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased proteasome localization to nuclear periphery","synonyms":[{"name":"increased proteasome localisation to nuclear periphery","type":"related"},{"name":"increased proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased proteasome localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005217"}


id: GO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains an Isw1 subunit from the ISWI-family of ATPases and acts to modify chromatin structure.","definition_xrefs":["PMID:15020051","PMID:16568949","PMID:21810179","GOC:mah","GOC:krc","PMID:15284901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"Isw1 complex","termid":"GO:0016587"}


id: PBO:0034752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex ubiquitin-like protein ligase subunit Cti6","termid":"PBO:0034752"}


id: PBO:0028420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ubiquinone_binding","termid":"PBO:0028420"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: PBO:0024825
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Arabidopsis thaliana AtSGP1","termid":"PBO:0024825"}


id: PBO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apelin","termid":"PBO:0039704"}


id: PBO:0044201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L","termid":"PBO:0044201"}


id: PBO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 pseudogene 2","termid":"PBO:0072746"}


id: GO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an AV node cell and its surroundings that contributes to the process of the AV node cell communicating with a bundle of His cell in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication","type":"exact"}],"termid":"GO:0086067"}


id: RO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervated_by","termid":"RO:0002005"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: PBO:0065698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 3","termid":"PBO:0065698"}


id: GO:1903694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic G1 cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15713656"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:1903694)","synonyms":[{"name":"activation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"narrow"},{"name":"activation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"narrow"},{"name":"positive regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"up-regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"upregulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"},{"name":"upregulation of mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:1903694"}


id: PBO:0067794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 96","termid":"PBO:0067794"}


id: PBO:0056833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 2","termid":"PBO:0056833"}


id: GO:0051979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of O-acetyl ester groups to alginic acid, a linear polymer of D-mannuronate and L-guluronate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alginic acid metabolic process","termid":"GO:0042120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"alginic acid acetylation","synonyms":[{"name":"alginate acetylation","type":"exact"}],"termid":"GO:0051979"}


id: PBO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U4","termid":"PBO:0003202"}


id: GO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that starts with the activation of a Ssk2/Win1 family MAP3K, which activates a Pbs2/Wis1 family MAP2K, resulting in the activation of a Hog1/Sty1 family MAPK. Hog1 then translocates from the cytosol into the nucleus where it affects the expression of a large number of genes. This cascade is activated by hyperosmolarity or other abiotic stresses and results in cellular responses such as cell cycle arrest.","definition_xrefs":["PMID:17604854","PMID:32794416","PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete osmosensory signaling MAPK cascade (obsolete GO:0000161)","synonyms":[{"name":"High Osmolarity Glycerol (HOG) MAPK pathway","type":"narrow"},{"name":"Hog1 MAPK pathway","type":"narrow"},{"name":"Hog1/Sty1 stress-activated MAPK cascade","type":"narrow"},{"name":"MAPK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade during osmolarity sensing","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signaling pathway","type":"exact"},{"name":"MAPKKK cascade involved in osmosensory signalling pathway","type":"exact"},{"name":"activation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of MAPKKK activity during osmolarity sensing","type":"narrow"},{"name":"activation of MAPKKK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"activation of Pbs2 kinase","type":"narrow"},{"name":"inactivation of MAPK activity involved in osmosensory signaling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPKKK cascade","type":"exact"},{"name":"osmolarity sensing, activation of MAP kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAP kinase kinase kinase activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKK activity","type":"narrow"},{"name":"osmolarity sensing, activation of MAPKKK activity","type":"narrow"},{"name":"termination of MAPK activity during osmolarity sensing","type":"narrow"}],"termid":"GO:0000161"}


id: GO:0086049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the AV node cardiac muscle cell membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane repolarization during cardiac muscle cell action potential","termid":"GO:0086013"},{"relation_name":"part_of","term_name":"AV node cell action potential","termid":"GO:0086016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"membrane repolarization during AV node cell action potential","synonyms":[{"name":"membrane repolarization involved in regulation of AV node cardiac muscle cell action potential","type":"exact"},{"name":"membrane repolarization involved in regulation of atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086049"}


id: GO:0080112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a seed. A seed is a propagating organ formed in the reproductive cycle of a spermatophyte, derived from the ovule and enclosing an embryo.","definition_xrefs":["PO:0009010","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed growth","termid":"GO:0080112"}


id: PR:Q9HGL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- whi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGL9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle transcriptional repressor whi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.02","synonyms":[{"name":"Spom972h-whi5","type":"exact"},{"name":"meiotically up-regulated gene 54 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGL9"}


id: PBO:0075854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 3","termid":"PBO:0075854"}


id: GO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of the growth cone which represents the distal part of the structure.","definition_xrefs":["PMID:10797548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell leading edge","termid":"GO:0031252"},{"relation_name":"part_of","term_name":"peripheral region of growth cone","termid":"GO:0090725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"growth cone leading edge","termid":"GO:0061850"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: GO:1901336
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone anabolism","type":"exact"},{"name":"lactone biosynthesis","type":"exact"},{"name":"lactone formation","type":"exact"},{"name":"lactone synthesis","type":"exact"}],"termid":"GO:1901336","terms_by_termid":{"GO:0070485":null}}


id: PBO:0047328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid hydroxylase domain containing 2","termid":"PBO:0047328"}


id: FYECO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a fatty acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:alock"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ fatty acid","termid":"FYECO:0000042"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: PBO:0052907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-4","termid":"PBO:0052907"}


id: PBO:0088604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein","termid":"PBO:0088604"}


id: GO:0140991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cytoplasmic post-transcriptional gene silencing pathway in which piRNAs direct the cleavage of target mRNAs. The target mRNA, often transcribed from a transposable element, is destabilized by the activity of a PIWI class endonuclease within the piRNA-induced silencing complex. This may also be accompanied by mRNA deadenylation and decapping.","definition_xrefs":["PMID:29281264","PMID:33419460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"}


id: GO:0047292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6AS,11AS)-3,6A,9-trihydroxypterocarpan + dimethylallyl-pyrophosphate = glyceollin + diphosphate.","definition_xrefs":["MetaCyc:2.5.1.36-RXN","EC:2.5.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trihydroxypterocarpan dimethylallyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4509","MetaCyc:RXN-4510"],"synonyms":[{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:(6aS,11aS)-3,6a,9-trihydroxypterocarpan dimethyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:3,6a,9-trihydroxypterocarpan dimethylallyltransferase activity","type":"related"},{"name":"dimethylallylpyrophosphate:trihydroxypterocarpan dimethylallyl transferase activity","type":"related"}],"termid":"GO:0047292"}


id: PBO:0109223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 4","termid":"PBO:0109223"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: GO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a glucocorticoid receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete glucocorticoid receptor import into nucleus (obsolete GO:0002147)","synonyms":[{"name":"glucocorticoid receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002147"}


id: PBO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily","termid":"PBO:0000189"}


id: GO:0031545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase activity","secondary_identifiers":["RHEA:63484","Reactome:R-HSA-1234177","Reactome:R-HSA-1234181","Reactome:R-HSA-1234165","Reactome:R-HSA-1234166","Reactome:R-HSA-1234173","Reactome:R-HSA-1234179"],"synonyms":[{"name":"HIF-type prolyl 4-hydroxylase","type":"narrow"},{"name":"prolyl 4-hydroxylase","type":"broad"}],"termid":"GO:0031545"}


id: PBO:0004628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase small subunit Suc22","termid":"PBO:0004628"}


id: PBO:0089303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssb2-like","termid":"PBO:0089303"}


id: PBO:0048379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARIN3 pseudogene 1","termid":"PBO:0048379"}


id: FYPO:0007370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on fructose carbon source","termid":"FYPO:0009095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth rate on fructose carbon source","synonyms":[{"name":"enhanced growth on fructose","type":"related"},{"name":"fast cell population growth on fructose carbon source","type":"exact"},{"name":"increased cell population proliferation on fructose carbon source","type":"related"},{"name":"increased cell proliferation on fructose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on fructose carbon source","type":"exact"}],"termid":"FYPO:0007370"}


id: PBO:0064274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G7","termid":"PBO:0064274"}


id: GO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of cytomatrix proteins to form complexes in the cell cortex beneath the active zone, i.e. just beneath the presynaptic plasma membrane.","definition_xrefs":["GOC:jid","GOC:ef","PMID:12812759","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoskeletal matrix organization at active zone","synonyms":[{"name":"cytoskeletal matrix organisation at active zone","type":"exact"}],"termid":"GO:0048789"}


id: PBO:0111799
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0111799"}


id: PBO:0059555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Trp (UGA/G)","termid":"PBO:0059555"}


id: GO:0106438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction :(L-glutamyl)n-L-gamma-glutamyl-L-glutamyl-[protein] + ATP + L-glutamate = (L-glutamyl)n+1-L-gamma-glutamyl-L-glutamyl-[protein] + ADP + H+ + phosphate.","definition_xrefs":["Rhea:60148","PMID:32747782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, elongating","termid":"GO:0106438"}


id: PBO:0056725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix extracellular phosphoglycoprotein","termid":"PBO:0056725"}


id: PBO:0065134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1","termid":"PBO:0065134"}


id: PBO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 11","termid":"PBO:0072009"}


id: FYECO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tamoxifen was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tamoxifen","termid":"FYECO:0000368"}


id: PR:O13326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- met17 gene.","definition_xrefs":["UniProtKB:O13326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.11","synonyms":[{"name":"O-acetylhomoserine sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OAH sulfhydrylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-met17","type":"exact"},{"name":"homocysteine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13326"}


id: PBO:0057948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-4","termid":"PBO:0057948"}


id: GO:0043565
data:
  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id: PBO:0000633
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.-","termid":"PBO:0000633"}


id: PBO:0066320
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring-box 1","termid":"PBO:0066320"}


id: PBO:0079488
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 8","termid":"PBO:0079488"}


id: GO:1900382
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of thiamine biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:16874521","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900382)","synonyms":[{"name":"regulation of thiamin biosynthetic process by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine anabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine formation by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of thiamine synthesis by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900382"}


id: GO:0035052
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of dorsal vessel cardioblast cells to an aortic cell fate and their capacity to differentiate into aortic cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:12397110","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"embryonic heart tube anterior/posterior pattern specification","termid":"GO:0035054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal vessel aortic cell fate commitment","termid":"GO:0035052"}


id: PBO:0058784
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7153","termid":"PBO:0058784"}


id: GO:0003692
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"left-handed Z-DNA binding","termid":"GO:0003692"}


id: GO:0075259
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  {"annotated_genes":["SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114269],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075319"}]},"cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spore-bearing structure over time, from its formation to the mature structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:mah","GOC:di","GOC:pamgo_curators","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fruiting structure development","type":"exact"},{"name":"sporangium development","type":"broad"},{"name":"spore-bearing organ development","type":"related"},{"name":"sporophore development","type":"exact"}],"termid":"GO:0075259","terms_by_termid":{"GO:0075319":null}}


id: PBO:0081141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP41 zinc finger protein","termid":"PBO:0081141"}


id: PBO:0041029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor","termid":"PBO:0041029"}


id: PBO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC24 component of NDC80 kinetochore complex","termid":"PBO:0075506"}


id: PBO:0034587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_glycerophospholipids","termid":"PBO:0034587"}


id: PBO:0060108
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 9","termid":"PBO:0060108"}


id: GO:0038092
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by nodal protein binding to an activin receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:17287255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor signaling pathway","termid":"GO:0032924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nodal signaling pathway","synonyms":[{"name":"nodal signaling","type":"exact"},{"name":"nodal signalling pathway","type":"exact"}],"termid":"GO:0038092"}


id: GO:0035773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin, in response to a glucose stimulus.","definition_xrefs":["PMID:8492079","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin secretion","termid":"GO:0030073"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0035773"}


id: GO:1990618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The ANPR-A:ANP complex is composed of the hormone AMP bound to the extracellular domain of ANPR-A domain. It is formed in the atrium in response to atrial distension (high blood volume) and leads to guanylate cyclase activity of the ANPR-A receptor, thereby elevating intracellular cGMP levels. The end result is a reduction in blood volume and, therefore, a reduction in cardiac output and systemic blood pressure. Therefore, ANPR-A:ANP complex plays a major role in the regulation of blood pressure and salt-fluid volume homeostasis.","definition_xrefs":["PMID:15117952","GOC:ame"],"gene_count":0,"genotype_count":0,"name":"obsolete ANPR-A:ANP complex (obsolete GO:1990618)","synonyms":[{"name":"ANPR-A:ANP complex","type":"exact"}],"termid":"GO:1990618"}


id: PBO:0074625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22B","termid":"PBO:0074625"}


id: PBO:0018057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase Trm140 (predicted)","termid":"PBO:0018057"}


id: PBO:0051269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa deleting element or like","termid":"PBO:0051269"}


id: PBO:0086257
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates expression of Fo-F1 ATP synthase subunits; involved in the regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; functions with Nca3p","termid":"PBO:0086257"}


id: GO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a distinct genetic entity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of viral latency","termid":"GO:0019043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of episomal latency","synonyms":[{"name":"establishment as a plasmid prophage","type":"narrow"},{"name":"establishment of plasmid latency","type":"exact"}],"termid":"GO:0075720"}


id: PBO:0059548
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Pro (CCN)","termid":"PBO:0059548"}


id: GO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + acetyl-CoA = N(alpha)-acetyl-L-histidine + CoA + H+.","definition_xrefs":["RHEA:24596","EC:2.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histidine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01160","MetaCyc:HISTIDINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:L-histidine N-acetyltransferase activity","type":"related"},{"name":"acetylhistidine synthetase activity","type":"related"},{"name":"histidine acetyltransferase activity","type":"related"}],"termid":"GO:0047981"}


id: PBO:0030765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0030765"}


id: PBO:0054078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1428","termid":"PBO:0054078"}


id: PBO:0062851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTOA pseudogene 1","termid":"PBO:0062851"}


id: PBO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fusion","termid":"PBO:0030947"}


id: PBO:0111485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD S5 small phosphatase Psr1","termid":"PBO:0111485"}


id: GO:0008913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a lauroyl (dodecanoyl) group from one compound to another.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"lauroyltransferase activity","synonyms":[{"name":"lauroyl transferase activity","type":"exact"}],"termid":"GO:0008913"}


id: FYPO:0003534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is lower than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:20501954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased monopolar index","synonyms":[{"name":"decreased frequency of monopolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing monopolar growth","type":"exact"},{"name":"reduced monopolar index","type":"exact"}],"termid":"FYPO:0003534"}


id: GO:0061456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a mesenchymal stem cell from one site to another contributing to the shaping of the ureteric bud. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in kidney development","termid":"GO:0035787"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell migration involved in uteric bud morphogenesis","termid":"GO:0061456"}


id: PBO:0000529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-cysteine ligase Gcs1","termid":"PBO:0000529"}


id: PBO:0075092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 141B","termid":"PBO:0075092"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: FYPO:0004801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins later than normal during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:25891897","PMID:22558440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of premeiotic DNA replication","termid":"FYPO:0004628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of premeiotic DNA replication during azygotic meiosis","synonyms":[{"name":"delayed onset of DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"delayed onset of premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"delayed onset of premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"delayed premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004801"}


id: GO:1900345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methanethiol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methanethiol","termid":"GO:1900345"}


id: PBO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin alpha","termid":"PBO:0045520"}


id: SO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regional centromere is a large modular centromere found in fission yeast and higher eukaryotes. It consist of a central core region flanked by inverted inner and outer repeat regions.","definition_xrefs":["SO:vw","PMID:7502067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere","termid":"SO:0000577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere","synonyms":[{"name":"regional centromere","type":"exact"}],"termid":"SO:0001795"}


id: GO:1902781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["PMID:22958739","GO_REF:0000071","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to nonane","termid":"GO:1902780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonane","termid":"GO:1902781"}


id: PBO:0069906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1197, pseudogene","termid":"PBO:0069906"}


id: PBO:0065428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 1","termid":"PBO:0065428"}


id: PBO:0051942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2C","termid":"PBO:0051942"}


id: PBO:0004530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase (predicted)","termid":"PBO:0004530"}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: PBO:0082257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-tubulin folding protein; similar to mammalian cofactor B; Alf1p-GFP localizes to cytoplasmic microtubules; required for the folding of alpha-tubulin and may play an additional role in microtubule maintenance","termid":"PBO:0082257"}


id: GO:0008540
data:
  {"annotated_genes":["SJAG_01544","SJAG_01131","SJAG_00712","SJAG_04088","SJAG_04477","SJAG_01489","SJAG_02992","SJAG_03638","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92851,95042,100166,101413,103152,106319,109120,111252,113477],"is_not":false,"summary":null,"term":"GO:0008540"}]},"cv_name":"cellular_component","definition":"The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome regulatory particle","termid":"GO:0005838"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02992":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle, base subcomplex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008540","terms_by_termid":{"GO:0008540":null}}


id: PBO:0047389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 28","termid":"PBO:0047389"}


id: GO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H2O + NADP+ = L-2-amino-6-oxopimelate + H+ + NADPH + NH4.","definition_xrefs":["RHEA:13561","EC:1.4.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diaminopimelate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02755","MetaCyc:DIAMINOPIMELATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"meso-2,6-diaminoheptanedioate:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"meso-alpha,epsilon-diaminopimelate dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate D-dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate dehydrogenase activity","type":"related"}],"termid":"GO:0047850"}


id: GO:2000788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"negatively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of venous endothelial cell fate commitment","termid":"GO:2000788"}


id: GO:0018757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deisopropylhydroxyatrazine + H2O = NH3 + 2,4-dihydroxy-6-(N'-ethyl)amino-1,3,5-triazine.","definition_xrefs":["UM-BBD_reactionID:r0121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"deisopropylhydroxyatrazine aminohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05574"],"termid":"GO:0018757"}


id: PBO:0030364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_oxygen","termid":"PBO:0030364"}


id: GO:0097083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate determination","termid":"GO:0007521"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate determination","synonyms":[{"name":"vascular smooth muscle cell fate determination","type":"exact"}],"termid":"GO:0097083"}


id: PBO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Git1","termid":"PBO:0004686"}


id: PBO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 34","termid":"PBO:0048323"}


id: PBO:0080565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and coiled coil containing","termid":"PBO:0080565"}


id: GO:0030319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic anion homeostasis (obsolete GO:0030319)","synonyms":[{"name":"cellular di-, tri-valent inorganic anion homeostasis","type":"exact"}],"termid":"GO:0030319"}


id: GO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by the displacement of the U11 and U4atac snRNPs from the precatalytic spliceosome; the U12, U5 and U6atac snRNPs remain associated with the mRNA. This complex, sometimes called the activated spliceosome, is the catalytically active form of the spliceosome, and includes many proteins in addition to those found in the U12, and U5 and U6atac snRNPs.","definition_xrefs":["GOC:krc","ISBN:0879695897","ISBN:0879697393","PMID:16201866","GOC:mah","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"catalytic step 1 spliceosome","termid":"GO:0071012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U12-type catalytic step 1 spliceosome","synonyms":[{"name":"AT-AC catalytic step 1 spliceosome","type":"narrow"},{"name":"U12-type activated spliceosome","type":"exact"},{"name":"mammalian U12-type spliceosomal complex B*","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex B2","type":"narrow"},{"name":"minor catalytic step 1 spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A1","type":"narrow"}],"termid":"GO:0071017"}


id: PBO:0067048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 68, pseudogene","termid":"PBO:0067048"}


id: PBO:0017777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Ybt1","termid":"PBO:0017777"}


id: GO:0051922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + cholesterol = adenosine 3',5'-bisphosphate + cholesterol sulfate + H+.","definition_xrefs":["PMID:12730293","PMID:11416019","PMID:12145317","RHEA:52368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol sulfotransferase activity","termid":"GO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol sulfotransferase activity","termid":"GO:0051922"}


id: PBO:0049178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREB1 like retinoic acid receptor coactivator","termid":"PBO:0049178"}


id: PBO:0069424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 687, pseudogene","termid":"PBO:0069424"}


id: PBO:0088581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family","termid":"PBO:0088581"}


id: PBO:0051390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 7","termid":"PBO:0051390"}


id: GO:0019692
data:
  {"annotated_genes":["SJAG_00885","SJAG_03771","SJAG_04487","SJAG_02948","SJAG_02874","SJAG_04665","SJAG_04657","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[88536,103339,91593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[95084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[114065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[104456,85503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88537,114066,85504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[114067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[104457,95085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[95086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deoxyribose phosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose phosphate metabolism","type":"exact"}],"termid":"GO:0019692","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0061396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide A","termid":"PBO:0061396"}


id: PBO:0057034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 128-2","termid":"PBO:0057034"}


id: PBO:0083433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YIL060W","termid":"PBO:0083433"}


id: GO:0070540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to stearic acid, the 18-carbon saturated fatty acid octadecanoic acid.","definition_xrefs":["GOC:mah","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"stearic acid binding","termid":"GO:0070540"}


id: GO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD+ = FMN + NADH + 2 H+.","definition_xrefs":["RHEA:21620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"FMN reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R05705","EC:1.5.1.42"],"synonyms":[{"name":"NADH dehydrogenase (FMN) activity","type":"exact"},{"name":"NADH-FMN reductase activity","type":"related"},{"name":"NADH-dependent FMN reductase activity","type":"related"}],"termid":"GO:0052874"}


id: PBO:0109612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA lyase like 1","termid":"PBO:0109612"}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: PR:Q9P7I0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat-containing protein C105.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.02c","synonyms":[{"name":"Spom972h-SPAC105.02c","type":"exact"}],"termid":"PR:Q9P7I0"}


id: FYPO:0003286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation","synonyms":[{"name":"decreased chromosome condensation during mitotic cell cycle","type":"related"},{"name":"decreased mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation","type":"exact"}],"termid":"FYPO:0003286"}


id: PBO:0074269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 11","termid":"PBO:0074269"}


id: GO:0140217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"positively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of D-aspartate import across plasma membrane","termid":"GO:0140217"}


id: PBO:0071819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 14","termid":"PBO:0071819"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: PBO:0048032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 3","termid":"PBO:0048032"}


id: PBO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_following_cellular_response_to_UV","termid":"PBO:0036089"}


id: FYPO:0001440
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115532,115533,115534],"is_not":false,"summary":null,"term":"FYPO:0001440"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein complex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03250":null,"SJAG_04349":null,"SJAG_04912":null},"genotype_count":3,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein complex localization","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_04912","SJAG_04349"],"single_locus_genotype_uniquenames":["vps28delta","sst4delta","vps25delta"],"synonyms":[{"name":"abnormal cellular protein complex localization","type":"exact"},{"name":"abnormal protein complex localisation","type":"exact"},{"name":"abnormal protein complex localization during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex localization during vegetative growth","type":"exact"}],"termid":"FYPO:0001440","terms_by_termid":{"FYPO:0001440":null,"FYPO_EXT:0000001":null,"GO:0000815":null}}


id: GO:0102798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heptanal + O2 + H2O = H+ + heptanoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete heptaldehyde:oxygen oxidoreductase activity (obsolete GO:0102798)","termid":"GO:0102798"}


id: GO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dGTP metabolic process","synonyms":[{"name":"dGTP metabolism","type":"exact"}],"termid":"GO:0046070"}


id: PBO:0053587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 612","termid":"PBO:0053587"}


id: GO:0050946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthophore differentiation","termid":"GO:0050938"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of xanthophore differentiation","synonyms":[{"name":"activation of xanthophore differentiation","type":"narrow"},{"name":"stimulation of xanthophore differentiation","type":"narrow"},{"name":"up regulation of xanthophore differentiation","type":"exact"},{"name":"up-regulation of xanthophore differentiation","type":"exact"},{"name":"upregulation of xanthophore differentiation","type":"exact"}],"termid":"GO:0050946"}


id: PBO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, mitochondrial","termid":"PBO:0061565"}


id: PBO:0068030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 335","termid":"PBO:0068030"}


id: PBO:0082336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain; required for silencing at the silent mating-type loci and telomeres; similar to E. coli MutL","termid":"PBO:0082336"}


id: GO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"}


id: GO:0043105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme GTP cyclohydrolase I.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTP cyclohydrolase I activity","termid":"GO:0043095"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTP cyclohydrolase I activity","synonyms":[{"name":"down regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"down-regulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"downregulation of GTP cyclohydrolase I activity","type":"exact"},{"name":"inhibition of GTP cyclohydrolase I activity","type":"narrow"}],"termid":"GO:0043105"}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["GOC:mtg_apoptosis","MSH:D017209","PMID:11909981","PMID:15905876","PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: GO:1901017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of potassium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transport","termid":"GO:1901380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of potassium ion transmembrane transporter activity","synonyms":[{"name":"down regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"down regulation of potassium transporter activity","type":"exact"},{"name":"down-regulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"down-regulation of potassium transporter activity","type":"exact"},{"name":"downregulation of potassium ion transmembrane transporter activity","type":"exact"},{"name":"downregulation of potassium transporter activity","type":"exact"},{"name":"inhibition of potassium ion transmembrane transporter activity","type":"narrow"},{"name":"inhibition of potassium transporter activity","type":"exact"},{"name":"negative regulation of potassium transporter activity","type":"exact"}],"termid":"GO:1901017"}


id: FYPO:0001562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular histidine level","secondary_identifiers":["FYPO:0001620"],"synonyms":[{"name":"decreased cellular L-histidine level","type":"exact"},{"name":"decreased cellular histidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular histidine level during vegetative growth","type":"exact"},{"name":"decreased histidine accumulation","type":"related"},{"name":"reduced cellular histidine level","type":"exact"}],"termid":"FYPO:0001562"}


id: FYPO:0000715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to K-252a. Cells stop growing (and may die) at a concentration of K-252a that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to K-252a","synonyms":[{"name":"hypersensitive to K-252a","type":"exact"},{"name":"sensitive to K-252a during mitotic cell cycle","type":"related"},{"name":"sensitive to K-252a during vegetative growth","type":"exact"}],"termid":"FYPO:0000715"}


id: GO:0045491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-1,4-linked D-xylose backbone.","definition_xrefs":["PMID:11931668","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylan metabolic process","synonyms":[{"name":"xylan metabolism","type":"exact"}],"termid":"GO:0045491"}


id: PBO:0091079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor, meiotic Mei4","termid":"PBO:0091079"}


id: PBO:0062724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 1","termid":"PBO:0062724"}


id: PBO:0057246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449c","termid":"PBO:0057246"}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: PBO:0004146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nulceotide exchange factor synembryn family","termid":"PBO:0004146"}


id: PBO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 18","termid":"PBO:0060117"}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["ISBN:068340007X","ISBN:0721662544","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: GO:0004303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estradiol-17-beta + NAD(P)+ = estrone + NAD(P)H + H+. The activity can use NAD+ or NADP+ as the acceptor.","definition_xrefs":["EC:1.1.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"estradiol 17-beta-dehydrogenase [NAD(P)+] activity","secondary_identifiers":["Reactome:R-HSA-5696822","Reactome:R-HSA-6810594","Reactome:R-HSA-8862137","Reactome:R-HSA-804969","MetaCyc:ESTRADIOL-17-BETA-DEHYDROGENASE-RXN","Reactome:R-HSA-5693390"],"synonyms":[{"name":"17-beta-HSD activity","type":"broad"},{"name":"17-beta-estradiol dehydrogenase activity","type":"related"},{"name":"17-beta-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"17beta,20alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"17beta-HSD","type":"related"},{"name":"17beta-estradiol dehydrogenase activity","type":"related"},{"name":"17beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"20alpha-hydroxysteroid dehydrogenase","type":"broad"},{"name":"estradiol 17-beta-dehydrogenase activity","type":"related"},{"name":"estradiol 17beta-dehydrogenase activity","type":"related"},{"name":"estradiol dehydrogenase activity","type":"related"},{"name":"estradiol-17beta:NAD(P)+ 17-oxidoreductase activity","type":"related"},{"name":"estrogen 17-oxidoreductase activity","type":"related"}],"termid":"GO:0004303"}


id: GO:0045851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pH","termid":"GO:0006885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pH reduction","synonyms":[{"name":"acidification","type":"exact"}],"termid":"GO:0045851"}


id: PBO:0028362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_in_stationary_phase","termid":"PBO:0028362"}


id: FYPO:0000922
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"abnormal NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000922"}


id: PBO:0031818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_autophagy","termid":"PBO:0031818"}


id: PBO:0054412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1808","termid":"PBO:0054412"}


id: GO:0102546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2-(alpha-D-mannosyl)-D-glycerate = alpha-D-mannose + D-glycerate.","definition_xrefs":["GOC:pz","EC:3.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannosylglycerate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-14900","RHEA:58456"],"termid":"GO:0102546"}


id: PBO:0085608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cystine transport; localizes to the vacuole, plasma membrane and endosome; similarity to human cystinosin, a H(+)-driven transporter involved in L-cystine export from lysosomes and implicated in the disease cystinosis; contains seven transmembrane domains; mutation is functionally complemented by human CTNS","termid":"PBO:0085608"}


id: PBO:0083796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of unknown function; with orthologs in Ashbya gossypii and Candida albicans; similar to human ATXN10, mutations in which cause spinocerebellar ataxia type 10; codon usage corresponds to that observed for yeast genes expressed at low levels; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0083796"}


id: PBO:0075762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 2","termid":"PBO:0075762"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: PBO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease subunit Dis3","termid":"PBO:0018071"}


id: GO:0034357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane enriched in complexes formed of reaction centers, accessory pigments and electron carriers, in which photosynthetic reactions take place.","definition_xrefs":["GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photosynthetic membrane","termid":"GO:0034357"}


id: GO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"}


id: PBO:0042910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 7","termid":"PBO:0042910"}


id: FYPO:0000722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acidic pH. Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to acidity","synonyms":[{"name":"acid pH resistance: decreased","type":"related"},{"name":"decreased growth during cellular response to acidity","type":"exact"},{"name":"decreased growth on acidic medium","type":"related"},{"name":"decreased vegetative cell population growth during cellular response to acidity","type":"exact"},{"name":"hypersensitive to acidity","type":"exact"},{"name":"sensitive to acidity during mitotic cell cycle","type":"related"},{"name":"sensitive to acidity during vegetative growth","type":"exact"}],"termid":"FYPO:0000722"}


id: GO:1900760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sterigmatocystin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of sterigmatocystin biosynthetic process","synonyms":[{"name":"down regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down regulation of sterigmatocystin formation","type":"exact"},{"name":"down regulation of sterigmatocystin synthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down-regulation of sterigmatocystin formation","type":"exact"},{"name":"down-regulation of sterigmatocystin synthesis","type":"exact"},{"name":"downregulation of sterigmatocystin anabolism","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"downregulation of sterigmatocystin formation","type":"exact"},{"name":"downregulation of sterigmatocystin synthesis","type":"exact"},{"name":"inhibition of sterigmatocystin anabolism","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthesis","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthetic process","type":"narrow"},{"name":"inhibition of sterigmatocystin formation","type":"exact"},{"name":"inhibition of sterigmatocystin synthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin anabolism","type":"exact"},{"name":"negative regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin formation","type":"exact"},{"name":"negative regulation of sterigmatocystin synthesis","type":"exact"}],"termid":"GO:1900760"}


id: FYPO:0001653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal lysine import during vegetative growth","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal L-lysine import during vegetative growth","type":"exact"},{"name":"abnormal lysine import during mitotic cell cycle","type":"related"},{"name":"abnormal lysine import into cell during vegetative growth","type":"exact"},{"name":"abnormal lysine uptake during vegetative growth","type":"exact"}],"termid":"FYPO:0001653"}


id: PBO:0051051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2-8","termid":"PBO:0051051"}


id: PBO:0064025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 59","termid":"PBO:0064025"}


id: PBO:0040517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 1","termid":"PBO:0040517"}


id: PBO:0028302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitosis","termid":"PBO:0028302"}


id: PBO:0039371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like","termid":"PBO:0039371"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: GO:0009682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.","definition_xrefs":["PMID:15233292","PMID:23386685","PMID:10234273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance","termid":"GO:0009682"}


id: PBO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.85","termid":"PBO:0003840"}


id: PBO:0058711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6839","termid":"PBO:0058711"}


id: GO:0140729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that reduces or removes the toxicity of an endogenously produced substance. Mechanisms of resistance to endogenously produced compounds include modification the compound, export, sequestration, or mutations in the target enzyme.","definition_xrefs":["PMID:29763292","PMID:21923907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"self-resistance to endogenously produced metabolite","synonyms":[{"name":"prevention of self-toxicity","type":"exact"},{"name":"self-resistance to bioactive secondary metabolite","type":"exact"},{"name":"self-resistance to endogenously produced compound","type":"exact"},{"name":"self-resistance to endogenously produced toxin","type":"exact"}],"termid":"GO:0140729"}


id: GO:1905304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:16151019","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of cardiac myofibril assembly","synonyms":[{"name":"regulation of cardiac myofibril development","type":"exact"},{"name":"regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905304"}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: GO:2001122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a maltoheptaose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltoheptaose metabolic process","synonyms":[{"name":"maltoheptaose metabolism","type":"exact"}],"termid":"GO:2001122"}


id: GO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"JUN kinase binding","synonyms":[{"name":"JNK binding","type":"exact"}],"termid":"GO:0008432"}


id: GO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sugar phosphorylated on the terminal carbon = a sugar + phosphate.","definition_xrefs":["EC:3.1.3.58","MetaCyc:SUGAR-TERMINAL-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"sugar-terminal-phosphatase activity","synonyms":[{"name":"sugar-omega-phosphate phosphohydrolase activity","type":"exact"},{"name":"xylitol-5-phosphatase activity","type":"narrow"}],"termid":"GO:0050309"}


id: GO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephric duct. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct formation","termid":"GO:0072179"}


id: GO:0002785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial humoral response","termid":"GO:0008348"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide production","synonyms":[{"name":"down regulation of antimicrobial peptide production","type":"exact"},{"name":"down-regulation of antimicrobial peptide production","type":"exact"},{"name":"downregulation of antimicrobial peptide production","type":"exact"},{"name":"inhibition of antimicrobial peptide production","type":"narrow"}],"termid":"GO:0002785"}


id: GO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor complex binding","synonyms":[{"name":"GM-CSF complex binding","type":"exact"},{"name":"GMC-SF complex binding","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor complex binding","type":"exact"}],"termid":"GO:0042021"}


id: PBO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0001430"}


id: PR:O74913
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.02c gene.","definition_xrefs":["UniProtKB:O74913","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C757.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.02c","synonyms":[{"name":"Spom972h-SPCC757.02c","type":"exact"}],"termid":"PR:O74913"}


id: PBO:0082375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor from ATF/CREB family involved in stress-responsive regulatory network; mediates transcriptional activation of NCE103 in response to low CO2 levels; proposed to be a regulator of oleate responsive genes; involved in utilization of non-optimal carbon sources and chromosome stability; relocalizes to the cytosol in response to hypoxia; CST6 has a paralog, ACA1, that arose from the whole genome duplication","termid":"PBO:0082375"}


id: PBO:0062497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 1","termid":"PBO:0062497"}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: PBO:0079895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 4","termid":"PBO:0079895"}


id: GO:0050470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylamine + H2O + electron-transferring flavoprotein = dimethylamine + formaldehyde + reduced electron-transferring flavoprotein.","definition_xrefs":["MetaCyc:1.5.8.2-RXN","EC:1.5.8.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trimethylamine dehydrogenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0854","RHEA:11864"],"synonyms":[{"name":"TMADh activity","type":"related"},{"name":"trimethylamine:electron-transferring flavoprotein oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0050470"}


id: PBO:0113179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein and plus-end directed microtubule (MT) polymerase; involved in mitotic spindle positioning, nuclear migration, microtubule polymerization and inhibition of MT catastrophe; stabilizes microtubules by targeting Bik1p to the MT plus end; Kip2p levels are controlled during the cell cycle","termid":"PBO:0113179"}


id: PBO:0072560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding D","termid":"PBO:0072560"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GO_REF:0000059","GOC:BHF_telomere","GOC:nc","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: PBO:0053608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 641","termid":"PBO:0053608"}


id: GO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lutein biosynthetic process","synonyms":[{"name":"lutein anabolism","type":"exact"},{"name":"lutein biosynthesis","type":"exact"},{"name":"lutein formation","type":"exact"}],"termid":"GO:0062171"}


id: PBO:0041194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB3 mitotic checkpoint protein","termid":"PBO:0041194"}


id: GO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A kinetochore multiprotein complex that bridges the subunits that are in contact with centromeric DNA and the subunits bound to microtubules during kinetochore assembly. In yeast, consists of Ctf19p, Okp1p, Mcm21p, and Ame1p.","definition_xrefs":["PMID:14633972","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0000776","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"COMA complex","synonyms":[{"name":"Ctf19p-Okp1p-Mcm1p-Ame1p complex","type":"exact"}],"termid":"GO:0000817"}


id: PBO:0041953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil and C2 domain containing 1A","termid":"PBO:0041953"}


id: PBO:0088742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate phosphatase converting phosphatidate to diacylglycerol, App1","termid":"PBO:0088742"}


id: PR:P36209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts1 gene.","definition_xrefs":["UniProtKB:P36209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(24(24(1)))-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.07c","synonyms":[{"name":"C-24(28) sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sts1","type":"exact"},{"name":"sterol Delta(24(28))-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36209"}


id: PBO:0047813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N2","termid":"PBO:0047813"}


id: GO:0099645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a neurotransmitter is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. postsynaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic specialization membrane","termid":"GO:0099633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor localization to postsynaptic specialization membrane","synonyms":[{"name":"neurotransmitter receptor localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099645"}


id: PBO:0031797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_G2/M_phase_transition_(obsolete_FYPO:0000404)","termid":"PBO:0031797"}


id: GO:0016733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete iron-iron nitrogenase activity (obsolete GO:0016733)","synonyms":[{"name":"iron-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016733"}


id: GO:0072345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when nicotinic acid adenine dinucleotide phosphate (NAADP) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:19557428","PMID:19387438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"NAADP-sensitive calcium-release channel activity","secondary_identifiers":["Reactome:R-HSA-2685505"],"termid":"GO:0072345"}


id: PBO:0088443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, centractin family actin-like protein Arp1","termid":"PBO:0088443"}


id: GO:0009089
data:
  {"annotated_genes":["SJAG_00881","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102065,111847],"is_not":false,"summary":null,"term":"GO:0009089"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process","termid":"GO:0009085"},{"relation_name":"is_a","term_name":"diaminopimelate metabolic process","termid":"GO:0046451"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diaminopimelate pathway","type":"exact"},{"name":"diaminopimelic acid pathway","type":"exact"},{"name":"lysine anabolism via diaminopimelate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid","type":"exact"},{"name":"lysine formation via diaminopimelate","type":"exact"},{"name":"lysine synthesis via diaminopimelate","type":"exact"}],"termid":"GO:0009089","terms_by_termid":{"GO:0009089":null}}


id: PBO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 44, pseudogene","termid":"PBO:0044458"}


id: FYPO:0000339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in an abnormal location. The normal location is at the midpoint of the long axis of the cell. The site of septum assembly is normally determined by the location of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"mislocalized septum during vegetative growth","secondary_identifiers":["FYPO:0002154"],"synonyms":[{"name":"abnormal contractile ring localization resulting in abnormal septum site selection","type":"related"},{"name":"abnormal contractile ring localization resulting in mislocalized septum","type":"related"},{"name":"abnormal division septum site selection","type":"related"},{"name":"abnormal septum localization during vegetative growth","type":"related"},{"name":"abnormal septum location during vegetative growth","type":"exact"},{"name":"abnormal septum position during vegetative growth","type":"exact"},{"name":"abnormal septum positioning during vegetative growth","type":"related"},{"name":"abnormal septum postitioning","type":"exact"},{"name":"abnormal septum site selection","type":"related"},{"name":"abnormal septum site selection during mitotic cell cycle","type":"related"},{"name":"abnormal septum site selection during vegetative growth","type":"related"},{"name":"asymmetric septum during vegetative growth","type":"exact"},{"name":"asymmetrically located septum during vegetative growth","type":"exact"},{"name":"mislocalised septum during vegetative growth","type":"exact"},{"name":"mislocalized septum during mitotic cell cycle","type":"related"},{"name":"misplaced septum during vegetative growth","type":"exact"},{"name":"septum site selection defects","type":"related"}],"termid":"FYPO:0000339"}


id: PBO:0054863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2277","termid":"PBO:0054863"}


id: PBO:0079793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A1 complex locus","termid":"PBO:0079793"}


id: PBO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartylglucosaminidase","termid":"PBO:0039021"}


id: GO:0004105
data:
  {"annotated_genes":["SJAG_00946"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111817],"is_not":false,"summary":null,"term":"GO:0004105"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline.","definition_xrefs":["EC:2.7.7.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483081","MetaCyc:2.7.7.15-RXN","RHEA:18997"],"synonyms":[{"name":"CDP-choline pyrophosphorylase activity","type":"related"},{"name":"CDP-choline synthetase activity","type":"related"},{"name":"CTP-phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:choline-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:phosphocholine cytidylyltransferase activity","type":"related"},{"name":"CTP:phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"choline phosphate cytidylyltransferase activity","type":"related"},{"name":"cytidine diphosphocholine pyrophosphorylase activity","type":"related"},{"name":"phosphocholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine cytidylyltransferase activity","type":"related"},{"name":"phosphorylcholine transferase activity","type":"related"},{"name":"phosphorylcholine:CTP cytidylyltransferase activity","type":"related"}],"termid":"GO:0004105","terms_by_termid":{"GO:0004105":null}}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["EC:1.6.5.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: PBO:0090272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane siderophore-iron transmembrane transporter Str2","termid":"PBO:0090272"}


id: PBO:0082449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-22 sterol desaturase; a cytochrome P450 enzyme that catalyzes the formation of the C-22(23) double bond in the sterol side chain in ergosterol biosynthesis; may be a target of azole antifungal drugs","termid":"PBO:0082449"}


id: PBO:0082860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of TRAPP complexes I, II and IV; transport protein particle (TRAPP) complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII, and IV); proposed subunit of a novel complex, TRAPPIV, that may function redundantly with TRAPPIII as a GEF that activates Ypt1 during autophagy","termid":"PBO:0082860"}


id: PBO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-target_is","termid":"PBO:0000016"}


id: GO:0098604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Se-Adenosyl-L-selenohomocysteine + H2O => Adenosine + Selenohomocysteine.","definition_xrefs":["PMID:1711890","PMID:7305945","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trialkylsulfonium hydrolase activity","termid":"GO:0016802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"adenosylselenohomocysteinase activity","secondary_identifiers":["Reactome:R-HSA-2408532"],"termid":"GO:0098604"}


id: GO:0021578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hindbrain to attain its fully functional state. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"central nervous system maturation","termid":"GO:0021626"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain maturation","termid":"GO:0021578"}


id: GO:0005536
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90637,94105],"is_not":false,"summary":null,"term":"GO:0005536"}]},"cv_name":"molecular_function","definition":"Binding to D-enantiomers of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"D-glucose binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose binding","type":"broad"}],"termid":"GO:0005536","terms_by_termid":{"GO:0005536":null}}


id: GO:2000260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"}


id: PBO:0048488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system protein H","termid":"PBO:0048488"}


id: GO:0030274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions.","definition_xrefs":["GOC:go_curators","Pfam:PF00412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"LIM domain binding","termid":"GO:0030274"}


id: PBO:0030826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_lithium_ion","termid":"PBO:0030826"}


id: PATO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of an inverted letter V.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted-V shaped","synonyms":[{"name":"chevron shaped","type":"broad"}],"termid":"PATO:0002484"}


id: GO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Co(I)-[trimethylamine-specific corrinoid protein] + H+ + trimethylamine = dimethylamine + methyl-Co(III)-[trimethylamine-specific corrinoid protein].","definition_xrefs":["PMID:9006042","RHEA:39287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trimethylamine methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8102","EC:2.1.1.250"],"synonyms":[{"name":"MT1","type":"broad"},{"name":"TMA methyltransferase 1","type":"exact"},{"name":"mttB1","type":"related"},{"name":"trimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"trimethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043834"}


id: PBO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 2","termid":"PBO:0060903"}


id: PBO:0042734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein L","termid":"PBO:0042734"}


id: PBO:0080338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 102 pseudogene","termid":"PBO:0080338"}


id: PATO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000242 flinch reflex (obsolete PATO:0000242)","termid":"PATO:0000242"}


id: PBO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 2","termid":"PBO:0061080"}


id: PBO:0075934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST20 antisense RNA 1","termid":"PBO:0075934"}


id: PBO:0083446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14","termid":"PBO:0083446"}


id: FYPO:0002822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body","termid":"FYPO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during M-phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during mitosis","type":"exact"}],"termid":"FYPO:0002822"}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_04894","SJAG_02101","SJAG_02070","SJAG_01313","SJAG_01765","SJAG_01713","SJAG_01436","SJAG_00458","SJAG_00119","SJAG_04559","SJAG_04261","SJAG_04030","SJAG_02506"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88129,90007,90197,92913,97100,97868,99435,101863,103775,105348,108923,109872,110732],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: PBO:0062251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BR member 1 pseudogene","termid":"PBO:0062251"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: PBO:0089334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1","termid":"PBO:0089334"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an oxysterol + NADPH + O2 = 7-alpha-hydroxylated oxysterol + NADP+ + H2O.","definition_xrefs":["PMID:10882791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192178","Reactome:R-HSA-5602885","Reactome:R-HSA-192065","Reactome:R-HSA-191972"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 divergent transcript","termid":"PBO:0047829"}


id: GO:0008092
data:
  {"annotated_genes":["SJAG_03088","SJAG_04074","SJAG_04841","SJAG_04001","SJAG_03086","SJAG_02431","SJAG_02814","SJAG_03229","SJAG_01760","SJAG_02566","SJAG_04141","SJAG_02384","SJAG_00851","SJAG_02848","SJAG_01268","SJAG_03011","SJAG_03380","SJAG_02609","SJAG_02656","SJAG_01665","SJAG_00723","SJAG_00773","SJAG_04886","SJAG_03835","SJAG_04745","SJAG_02045","SJAG_02624","SJAG_01546","SJAG_01754","SJAG_04621","SJAG_04100","SJAG_01993","SJAG_01964","SJAG_01384","SJAG_01943","SJAG_04982","SJAG_02795","SJAG_02700","SJAG_03703","SJAG_01613","SJAG_03073","SJAG_02336","SJAG_02245","SJAG_01894","SJAG_00677","SJAG_00930","SJAG_04781","SJAG_03540","SJAG_00152","SJAG_04703","SJAG_02270","SJAG_02396","SJAG_01297","SJAG_00279","SJAG_00332","SJAG_03455","SJAG_03025","SJAG_02040","SJAG_03119","SJAG_04498","SJAG_00938","SJAG_01598","SJAG_00042","SJAG_02075","SJAG_00970"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68503,68276,69194,62505,61942,68730,60848,70205,63273,64113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003779"},{"annotations":[76730,78715,75559,73299,69282,74735,72508,69304,75311,75518,76750,77871,69092,73830,76358,77074,78800,78505,70514,78586,75028,77868,70078,78113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051015"},{"annotations":[76105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"},{"annotations":[71202,74736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003785"},{"annotations":[66333,75724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048487"},{"annotations":[61740,59075,75391,63426,73074,75679,60858,78628,75743,58608,77648,74998,65665,76052,72790,75364,63412,67505,68104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008017"},{"annotations":[70193,70749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[69546,78782,64780,67637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"},{"annotations":[70683,78695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032036"}]},"cv_name":"molecular_function","definition":"Binding to a protein component of a cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00152":null,"SJAG_00279":null,"SJAG_00332":null,"SJAG_00677":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01297":null,"SJAG_01384":null,"SJAG_01546":null,"SJAG_01598":null,"SJAG_01613":null,"SJAG_01665":null,"SJAG_01754":null,"SJAG_01760":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02270":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03073":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03229":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04074":null,"SJAG_04100":null,"SJAG_04141":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04841":null,"SJAG_04886":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cytoskeletal protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0008092","terms_by_termid":{"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0008017":null,"GO:0032036":null,"GO:0048487":null,"GO:0051010":null,"GO:0051011":null,"GO:0051015":null}}


id: PBO:0054968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2382","termid":"PBO:0054968"}


id: GO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"ankyrin binding","termid":"GO:0030506"}


id: PBO:0062333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 72 pseudogene","termid":"PBO:0062333"}


id: FYPO:0005627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to ultraviolet (UV) light, when cells are exposed to UV during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0003445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"delayed DNA damage checkpoint deactivation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint after UV irradiation during S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"prolonged DNA damage checkpoint during cellular response to UV during mitotic S phase","type":"exact"}],"termid":"FYPO:0005627"}


id: GO:0102554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [2-oxoglutarate-dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz","EC:2.8.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on 2-oxoglutarate-dehydrogenase E2 protein (obsolete GO:0102554)","termid":"GO:0102554"}


id: PBO:0034552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_phosphorylceramide_level","termid":"PBO:0034552"}


id: GO:1902684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor localization to synapse.","definition_xrefs":["GO_REF:0000058","GOC:kmv","PMID:22252129","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"negatively_regulates","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor localization to synapse","synonyms":[{"name":"down regulation of receptor localisation to synapse","type":"exact"},{"name":"down regulation of receptor localization to synapse","type":"exact"},{"name":"down-regulation of receptor localisation to synapse","type":"exact"},{"name":"down-regulation of receptor localization to synapse","type":"exact"},{"name":"downregulation of receptor localisation to synapse","type":"exact"},{"name":"downregulation of receptor localization to synapse","type":"exact"},{"name":"inhibition of receptor localisation to synapse","type":"narrow"},{"name":"inhibition of receptor localization to synapse","type":"narrow"},{"name":"negative regulation of receptor localisation to synapse","type":"exact"}],"termid":"GO:1902684"}


id: PBO:0003816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php4","termid":"PBO:0003816"}


id: GO:0160174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular developmental process by which the outer layer of the cell (the cortex) rotates relative to the inner cytoplasm.","definition_xrefs":["PMID:37983969","PMID:22949618","PMID:25077289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cortical rotation","termid":"GO:0160174"}


id: PBO:0066055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C pseudogene 1","termid":"PBO:0066055"}


id: _global:existence_starts_and_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x exists during y if and only if: 1) the time point at which x begins to exist is after or equal to the time point at which y begins and 2) the time point at which x ceases to exist is before or equal to the point at which y ends. Formally: x existence starts and ends during y iff α(x) >= α(y) & α(x) <= ω(y) & ω(x) <= ω(y) & ω(x) >= α(y)","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during","termid":"_global:existence_ends_during"},{"relation_name":"is_a","term_name":"existence_starts_during","termid":"_global:existence_starts_during"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_and_ends_during","secondary_identifiers":["RO:0002491"],"synonyms":[{"name":"exists during","type":"exact"}],"termid":"_global:existence_starts_and_ends_during"}


id: PBO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 9, envelope","termid":"PBO:0046555"}


id: GO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent activation of D-alanine and its transfer as a thiol ester to the phosphopantheinyl prosthetic group of a D-alanyl carrier protein, according to the reaction: ATP + D-alanine + a [D-alaninyl carrier protein] = a D-alanyl-[D-alanyl carrier protein] + AMP + diphosphate.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"D-alanine [D-alanyl carrier protein] ligase activity","synonyms":[{"name":"D-alanine-D-alanyl carrier protein ligase activity","type":"related"},{"name":"D-alanine-activating enzyme activity","type":"related"},{"name":"D-alanine-poly(phosphoribitol) ligase activity","type":"broad"},{"name":"D-alanine:poly(phosphoribitol) ligase (AMP-forming)","type":"broad"}],"termid":"GO:0047473"}


id: PR:Q09840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.14c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah2","type":"exact"}],"termid":"PR:Q09840"}


id: PBO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium ion transmembrane transporter (predicted)","termid":"PBO:0018035"}


id: PBO:0111056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: GO:0009548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a plasmodesma.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasmodesmatal plasma membrane","termid":"GO:0009548"}


id: GO:0032037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin I complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin I binding","termid":"GO:0017024"},{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"myosin I heavy chain binding","termid":"GO:0032037"}


id: GO:0003797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antibacterial peptide activity (obsolete GO:0003797)","synonyms":[{"name":"antibacterial peptide activity","type":"exact"}],"termid":"GO:0003797"}


id: PBO:0049795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 1","termid":"PBO:0049795"}


id: GO:0110054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:11575927","PMID:10585915","GOC:mah","PMID:19244341","PMID:15743909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of actin filament annealing","termid":"GO:0110054"}


id: GO:0071905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein N-linked glycosylation via asparagine in which glucose is added to the N4 of asparagine, forming an (S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid residue.","definition_xrefs":["GOC:pr","RESID:AA0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation via asparagine","termid":"GO:0018279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein N-linked glucosylation via asparagine","synonyms":[{"name":"protein amino acid N-linked glucosylation via asparagine","type":"exact"}],"termid":"GO:0071905"}


id: PBO:0058640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-2","termid":"PBO:0058640"}


id: PBO:0080498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor pseudogene 1","termid":"PBO:0080498"}


id: PBO:0080370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VOPP1 WW domain binding protein","termid":"PBO:0080370"}


id: PR:Q10105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translational activator GCN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-2-alpha kinase activator gcn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.05c","secondary_identifiers":["UniProtKB:Q10105"],"synonyms":[{"name":"Spom972h-GCN1L1","type":"exact"},{"name":"translational activator gcn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10105"}


id: FYPO:0005066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000871"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 methylation at centromere during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 methylation at centromeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 methylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0005066"}


id: GO:0035254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glutamate receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glutamate receptor binding","termid":"GO:0035254"}


id: PBO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (predicted)","termid":"PBO:0002574"}


id: PR:Q9UT25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.02c gene.","definition_xrefs":["UniProtKB:Q9UT25","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.02c","synonyms":[{"name":"Spom972h-SPAC9.02c","type":"exact"}],"termid":"PR:Q9UT25"}


id: PBO:0057565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 760","termid":"PBO:0057565"}


id: PR:Q9UTM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC139.05 gene.","definition_xrefs":["UniProtKB:Q9UTM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C139.05 [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.05","synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC139.05","type":"exact"}],"termid":"PR:Q9UTM8"}


id: GO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-glucose + H2O = AMP + glucose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ADP-glucose pyrophosphohydrolase activity","termid":"GO:0080042"}


id: FYPO:0003439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that has branches. For example, the septum may be Y-shaped.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"branched septum","synonyms":[{"name":"branched septum during mitotic cell cycle","type":"related"},{"name":"branched septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003439"}


id: GO:0019398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, where the first step is the conversion of gallate to (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate catalyzed by gallate dioxygenase.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic gallate catabolic process","termid":"GO:0042195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"gallate catabolic process via gallate dioxygenase activity","secondary_identifiers":["MetaCyc:GALLATE-DEGRADATION-II-PWY"],"synonyms":[{"name":"gallate breakdown via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallate catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"broad"},{"name":"gallate degradation via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolic process via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"},{"name":"gallic acid catabolism via 4-carboxy-2-hydroxhexa-2,3-dienedioate","type":"exact"}],"termid":"GO:0019398"}


