# terms

id: GO:0018760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 H+ + thiocyanate = carbonyl sulfide + NH4.","definition_xrefs":["EC:3.5.5.8","RHEA:21464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","termid":"GO:0016815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"thiocyanate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-1761","UM-BBD_reactionID:r0598","KEGG_REACTION:R05780"],"synonyms":[{"name":"thiocyanate aminohydrolase activity","type":"related"}],"termid":"GO:0018760"}


id: PBO:0063497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 5","termid":"PBO:0063497"}


id: PBO:0040137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 3","termid":"PBO:0040137"}


id: GO:0052882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a copper protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","secondary_identifiers":["EC:1.20.9.-"],"termid":"GO:0052882"}


id: PBO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 4","termid":"PBO:0072017"}


id: FYPO:0002519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell cycle arrest that normally occurs in response to mitotic G2/M transition cell cycle checkpoint signaling does not occur. Abolished arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitotic G2/M phase transition","termid":"FYPO:0002516"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abolished response to mitotic G2/M transition checkpoint signaling","synonyms":[{"name":"abolished mitotic G2/M transition arrest","type":"related"},{"name":"cell cycle arrest resulting from mitotic G2/M transition checkpoint activation abolished","type":"exact"},{"name":"mitotic G2/M checkpoint arrest deficient","type":"related"}],"termid":"FYPO:0002519"}


id: PR:Q9P6N8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX47 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent rRNA helicase rrp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.08c","secondary_identifiers":["UniProtKB:Q9P6N8"],"synonyms":[{"name":"Spom972h-DDX47","type":"exact"}],"termid":"PR:Q9P6N8"}


id: PBO:0026655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_negative_regulation_of_transcription_by_glucose","termid":"PBO:0026655"}


id: PBO:0028849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_stability","termid":"PBO:0028849"}


id: GO:0070511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 20 of histone H4.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H4-K20 methylation (obsolete GO:0070511)","synonyms":[{"name":"down regulation of histone H4-K20 methylation","type":"exact"},{"name":"down-regulation of histone H4-K20 methylation","type":"exact"},{"name":"downregulation of histone H4-K20 methylation","type":"exact"},{"name":"inhibition of histone H4-K20 methylation","type":"narrow"}],"termid":"GO:0070511"}


id: GO:0019017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome that is divided into two or more physically separate molecules of nucleic acid and packaged into a single virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete segmented viral genome (obsolete GO:0019017)","termid":"GO:0019017"}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: GO:1901105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetracenomycin C.","definition_xrefs":["UniPathway:UPA00174","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"tetracenomycin C metabolic process","termid":"GO:1901104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"tetracenomycin C catabolic process","synonyms":[{"name":"tetracenomycin C breakdown","type":"exact"},{"name":"tetracenomycin C catabolism","type":"exact"},{"name":"tetracenomycin C degradation","type":"exact"}],"termid":"GO:1901105"}


id: PR:Q10137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo20 gene.","definition_xrefs":["UniProtKB:Q10137","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.10","synonyms":[{"name":"PI/PC TP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo20","type":"exact"},{"name":"phosphatidylinositol/phosphatidyl-choline transfer protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sporulation-specific protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10137"}


id: FYPO:0001461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases normally immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001461"}


id: PBO:0063098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator beta","termid":"PBO:0063098"}


id: GO:0042962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + acridine(in) = H+(in) + acridine(out).","definition_xrefs":["PMID:10735876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acridine:proton antiporter activity","synonyms":[{"name":"acridine efflux pump activity","type":"related"},{"name":"acridine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0042962"}


id: GO:0006683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosylceramide metabolic process","termid":"GO:0006681"},{"relation_name":"is_a","term_name":"galactolipid catabolic process","termid":"GO:0019376"},{"relation_name":"is_a","term_name":"glycosylceramide catabolic process","termid":"GO:0046477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"galactosylceramide catabolic process","synonyms":[{"name":"galactosylceramide breakdown","type":"exact"},{"name":"galactosylceramide catabolism","type":"exact"},{"name":"galactosylceramide degradation","type":"exact"}],"termid":"GO:0006683"}


id: PBO:0041606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 3","termid":"PBO:0041606"}


id: GO:0099644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to presynaptic membrane","synonyms":[{"name":"protein localisation in presynaptic membrane","type":"exact"},{"name":"protein localisation to presynaptic membrane","type":"exact"},{"name":"protein localization in presynaptic membrane","type":"exact"}],"termid":"GO:0099644"}


id: PBO:0042280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 pseudogene 1","termid":"PBO:0042280"}


id: PBO:0038570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase","termid":"PBO:0038570"}


id: PBO:0046719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 5","termid":"PBO:0046719"}


id: PBO:0048226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest and DNA damage inducible gamma","termid":"PBO:0048226"}


id: SO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"CDS region corresponding to a transit peptide region of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transit_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:transit_peptide","type":"exact"},{"name":"transit peptide region of CDS","type":"exact"}],"termid":"SO:0002252"}


id: PBO:0068176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 483","termid":"PBO:0068176"}


id: PBO:0087976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase that catalyzes final step in tRNA splicing: the transfer of the 2'-PO(4) from the splice junction to NAD(+) to form ADP-ribose 1''-2''cyclic phosphate and nicotinamide","termid":"PBO:0087976"}


id: SO:0001194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a GNA sequence in the (R)-GNA enantiomer.","definition_xrefs":["CHEBI:48016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GNA","termid":"SO:0001192"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_GNA","synonyms":[{"name":"R GNA","type":"exact"}],"termid":"SO:0001194"}


id: GO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"isocitrate dehydrogenase complex (NAD+)","termid":"GO:0045242"}


id: PBO:0030512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_reversine","termid":"PBO:0030512"}


id: PR:Q9UUJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.10c gene.","definition_xrefs":["UniProtKB:Q9UUJ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C1952.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.10c","synonyms":[{"name":"Spom972h-SPAC1952.10c","type":"exact"}],"termid":"PR:Q9UUJ8"}


id: PR:G2TRT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.18","synonyms":[{"name":"Spom972h-SPCC1235.18","type":"exact"}],"termid":"PR:G2TRT8"}


id: PBO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.32","termid":"PBO:0004630"}


id: PBO:0036535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron hydrogenase Nar1 (predicted)","termid":"PBO:0036535"}


id: PBO:0058249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4536-2","termid":"PBO:0058249"}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_02140","SJAG_00522","SJAG_01406","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[84556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[114499,97754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[97757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005312","GO:0015365","Reactome:R-HSA-372843","Reactome:R-HSA-1614546"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015141":null,"GO:0015183":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: PBO:0043229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 1","termid":"PBO:0043229"}


id: GO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + ATP + UDP-N-acetylmuramate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanine.","definition_xrefs":["EC:6.3.2.8","RHEA:23372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanine ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMUR-ALA-LIG-RXN","KEGG_REACTION:R03193"],"synonyms":[{"name":"L-Ala ligase activity","type":"related"},{"name":"L-alanine-adding enzyme activity","type":"related"},{"name":"MurC synthetase activity","type":"narrow"},{"name":"UDP-MurNAc:L-alanine ligase activity","type":"related"},{"name":"UDP-N-acetylmuramate:L-alanine ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl:L-alanine ligase activity","type":"related"},{"name":"UDP-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"UDPMurNAc-L-alanine synthetase activity","type":"related"},{"name":"alanine-adding enzyme activity","type":"related"},{"name":"uridine 5'-diphosphate-N-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"uridine diphosphate N-acetylmuramate:L-alanine ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"uridine-diphosphate-N-acetylmuramate:L-alanine ligase activity","type":"related"}],"termid":"GO:0008763"}


id: PBO:0051554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 4","termid":"PBO:0051554"}


id: GO:0034362
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triglyceride and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF","GOC:expert_pt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"low-density lipoprotein particle","synonyms":[{"name":"LDL complex","type":"exact"},{"name":"LDL particle","type":"exact"},{"name":"low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034362"}


id: PBO:0050819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 4","termid":"PBO:0050819"}


id: PBO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 3","termid":"PBO:0045092"}


id: PBO:0087546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; cooperates with Tfc3p in DNA binding; human homolog is TFIIIC-110","termid":"PBO:0087546"}


id: PBO:0052311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0586","termid":"PBO:0052311"}


id: GO:0010440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an unspecialized epidermal cell progresses through a series of divisions that culminate in the production of a stomatal complex.","definition_xrefs":["GOC:tb","GOC:expert_db"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal lineage progression","termid":"GO:0010440"}


id: GO:0044593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of iron-sulfur-molybdenum cofactor, the cofactor located at the active site of the molybdenum nitrogenase.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:18429691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"FeMoco assembly","type":"exact"},{"name":"FeMoco biosynthetic process","type":"exact"},{"name":"iron molybdenum cofactor assembly","type":"exact"},{"name":"iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"iron molybdenum cofactor biosynthetic process","type":"exact"}],"termid":"GO:0044593"}


id: PBO:0029215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_wall","termid":"PBO:0029215"}


id: PATO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000166 absolute time (obsolete PATO:0000166)","termid":"PATO:0000166"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carotene + NADPH + O2 + H+ = a beta-ring hydroxylcarotene + NADP+ + H2O. Adds a hydroxyl group to the epsilon ring of the alpha-carotene.","definition_xrefs":["MetaCyc:CPD1F-118","GOC:mah","MetaCyc:CPD-7421","MetaCyc:RXN-5962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: PR:O94409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.02","synonyms":[{"name":"Spom972h-wtf23","type":"exact"}],"termid":"PR:O94409"}


id: GO:0008225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-negative bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-negative antibacterial peptide activity (obsolete GO:0008225)","synonyms":[{"name":"Gram-negative antibacterial peptide activity","type":"exact"}],"termid":"GO:0008225"}


id: PR:Q10494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.07 gene.","definition_xrefs":["UniProtKB:Q10494","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26F1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.07","synonyms":[{"name":"Spom972h-SPAC26F1.07","type":"exact"}],"termid":"PR:Q10494"}


id: GO:0008013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a catenin beta subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-catenin binding","termid":"GO:0008013"}


id: FYPO:0000014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"tapered cell","synonyms":[{"name":"bottle-shaped cell","type":"exact"},{"name":"cell morphology, bottle/skittle","type":"exact"},{"name":"skittle-shaped cell","type":"exact"}],"termid":"FYPO:0000014"}


id: GO:0070352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell proliferation","termid":"GO:0070346"},{"relation_name":"is_a","term_name":"regulation of white fat cell proliferation","termid":"GO:0070350"},{"relation_name":"positively_regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of white fat cell proliferation","synonyms":[{"name":"activation of white fat cell proliferation","type":"narrow"},{"name":"positive regulation of white adipocyte proliferation","type":"exact"},{"name":"positive regulation of white adipose cell proliferation","type":"exact"},{"name":"stimulation of white fat cell proliferation","type":"narrow"},{"name":"up regulation of white fat cell proliferation","type":"exact"},{"name":"up-regulation of white fat cell proliferation","type":"exact"},{"name":"upregulation of white fat cell proliferation","type":"exact"}],"termid":"GO:0070352"}


id: GO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C-activating phototransduction signaling pathway. Activated rhodopsin (R*) is inactivated by a two-step process: first, R* is phosphorylated by rhodopsin kinase which lowers the activity of R*. Second, the protein arrestin binds to phosphorylated R* to de-activate it.","definition_xrefs":["GOC:hb","PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of opsin-mediated signaling pathway","termid":"GO:0016059"},{"relation_name":"is_a","term_name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900737"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating opsin-mediated signaling pathway","termid":"GO:0030265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating phototransduction signaling pathway","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"metarhodopsin inactivation","type":"narrow"}],"termid":"GO:0016060"}


id: GO:0016088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A polypeptide hormone that stimulates glucose uptake by muscle and adipose tissue, and promotes glycogenesis, lipogenesis and the synthesis of proteins and nucleic acids.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin (obsolete GO:0016088)","synonyms":[{"name":"insulin","type":"exact"}],"termid":"GO:0016088"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["UniProtKB:G2TRL6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: GO:0060048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Muscle contraction of cardiac muscle tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle contraction","synonyms":[{"name":"heart muscle contraction","type":"exact"}],"termid":"GO:0060048"}


id: GO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"rhamnose metabolic process","synonyms":[{"name":"rhamnose metabolism","type":"exact"}],"termid":"GO:0019299"}


id: PBO:0113402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor; induces superficial pseudohyphal growth, positively regulates invasive growth, but is not required for invasive pseudohyphal growth; may act together with Phd1p; promotes cell adhesion independent of Flo11p by repressing genes that encode cell wall degrading enzymes; localizes to the nucleus; potential Cdc28p substrate","termid":"PBO:0113402"}


id: PBO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimer","termid":"PBO:0000391"}


id: PBO:0084347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1); chromatin assembly by CAF-1 is important for multiple processes including histone H3/H4 tetramerization, silencing at telomeres, mating type loci and rDNA, maintenance of kinetochore structure, deactivation of  DNA damage checkpoint after DNA repair, chromatin dynamics during transcription, and repression of divergent noncoding transcription","termid":"PBO:0084347"}


id: PBO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 1","termid":"PBO:0071754"}


id: PBO:0064470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon, catalytic subunit","termid":"PBO:0064470"}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"gap junction assembly","termid":"GO:0016264"}


id: GO:0160137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2457) in 23S rRNA = pseudouridine(2457) in 23S rRNA.","definition_xrefs":["RHEA:38871","EC:5.4.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2457) synthase activity","termid":"GO:0160137"}


id: GO:0007434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in an adult organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007434"}


id: PBO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CuSE 5'-[ACT]T[ACT]NNGCTG[AGT]-3'","termid":"PBO:0000339"}


id: GO:1904189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GO_REF:0000058","PMID:12200142","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"is_a","term_name":"regulation of transformation of host cell by virus","termid":"GO:1904187"},{"relation_name":"positively_regulates","term_name":"transformation of host cell by virus","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transformation of host cell by virus","synonyms":[{"name":"activation of transformation of host cell by virus","type":"narrow"},{"name":"activation of viral transformation","type":"narrow"},{"name":"activation of viral transformation of host cell","type":"narrow"},{"name":"positive regulation of viral transformation","type":"exact"},{"name":"positive regulation of viral transformation of host cell","type":"exact"},{"name":"up regulation of transformation of host cell by virus","type":"exact"},{"name":"up regulation of viral transformation","type":"exact"},{"name":"up regulation of viral transformation of host cell","type":"exact"},{"name":"up-regulation of transformation of host cell by virus","type":"exact"},{"name":"up-regulation of viral transformation","type":"exact"},{"name":"up-regulation of viral transformation of host cell","type":"exact"},{"name":"upregulation of transformation of host cell by virus","type":"exact"},{"name":"upregulation of viral transformation","type":"exact"},{"name":"upregulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904189"}


id: FYPO:0001102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased protein level during cellular response to H2O2","type":"exact"},{"name":"increased protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0001102"}


id: PBO:0084632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase involved in methylation of histone H4 Lys5, -8, -12; S-adenosylmethionine-dependent; zinc-finger protein, contains one canonical and two unusual fingers in unusual arrangements; deletion enhances replication of positive-strand RNA virus","termid":"PBO:0084632"}


id: PR:Q9HDU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A galactose-1-phosphate uridylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11943:SF0","PRO:DNx","OMA:SCHPO04141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.10c","secondary_identifiers":["UniProtKB:Q9HDU5"],"synonyms":[{"name":"Spom972h-GALT","type":"exact"},{"name":"UDP-glucose--hexose-1-phosphate uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gal-1-P uridylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU5"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: PBO:0058924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7c","termid":"PBO:0058924"}


id: GO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when cyclic adenosine diphosphate ribose (cADPR) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:11752598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cADPR-sensitive calcium-release channel activity","termid":"GO:0072346"}


id: PBO:0078754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61A","termid":"PBO:0078754"}


id: PBO:0048566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamylamine cyclotransferase","termid":"PBO:0048566"}


id: GO:0141140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the immunoglobulin-mediated immune response of the host organism. One common mechanism by which this happens is the direct inhibition of immunoglobulin activity, by direct binding or modification. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22256861","PMID:18426869","PMID:24753590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host immunoglobulin-mediated immune response","synonyms":[{"name":"symbiont-mediated suppression of host immunoglobulin activity","type":"related"}],"termid":"GO:0141140"}


id: GO:0050561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Glx) + L-glutamate + ATP = glutamyl-tRNA(Glx) + diphosphate + AMP.","definition_xrefs":["EC:6.1.1.24","MetaCyc:6.1.1.24-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140101","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"glutamate-tRNA(Gln) ligase activity","secondary_identifiers":["RHEA:18397"],"synonyms":[{"name":"L-glutamate:tRNAGlx ligase (AMP-forming)","type":"related"},{"name":"glutamate-tRNAGln ligase activity","type":"exact"},{"name":"nondiscriminating glutamyl-tRNA synthetase activity","type":"related"}],"termid":"GO:0050561"}


id: FYPO:0001704
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115319,115524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is abnormal. A cell cycle checkpoint normally controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events. In a mutant, the checkpoint may fail to activate under appropriate conditions, or may occur to a greater or lesser extent than wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0000075","GO:0007093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001704","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 19","termid":"PBO:0050733"}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: GO:0019270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aerobactin (C22H36N4O13), a hydroxamate iron transport compound. It is a conjugate of 6-(N-acetyl-N-hydroxylamine)-2-aminohexanoic acid and citric acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"aerobactin metabolic process","termid":"GO:0046442"},{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobactin biosynthetic process","secondary_identifiers":["MetaCyc:AEROBACTINSYN-PWY"],"synonyms":[{"name":"aerobactin anabolism","type":"exact"},{"name":"aerobactin biosynthesis","type":"exact"},{"name":"aerobactin formation","type":"exact"},{"name":"aerobactin synthesis","type":"exact"}],"termid":"GO:0019270"}


id: GO:0019293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of phenylalanine to tyrosine.","definition_xrefs":["PMID:4004813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tyrosine biosynthetic process, by oxidation of phenylalanine","secondary_identifiers":["MetaCyc:PWY-6134","GO:0019291"],"synonyms":[{"name":"L-tyrosine biosynthesis IV","type":"exact"},{"name":"tyrosine anabolism, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine formation, by oxidation of phenylalanine","type":"exact"},{"name":"tyrosine synthesis, by oxidation of phenylalanine","type":"exact"}],"termid":"GO:0019293"}


id: PBO:0031516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_binding","termid":"PBO:0031516"}


id: GO:1902573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:TermGenie","GOC:krc","PMID:20179351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine-type peptidase activity","synonyms":[{"name":"activation of serine protease activity","type":"narrow"},{"name":"activation of serine-type peptidase activity","type":"narrow"},{"name":"positive regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine protease activity","type":"narrow"},{"name":"up regulation of serine-type peptidase activity","type":"exact"},{"name":"up-regulation of serine protease activity","type":"narrow"},{"name":"up-regulation of serine-type peptidase activity","type":"exact"},{"name":"upregulation of serine protease activity","type":"narrow"},{"name":"upregulation of serine-type peptidase activity","type":"exact"}],"termid":"GO:1902573"}


id: PBO:0015696
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SSK1","termid":"PBO:0015696"}


id: PBO:0070310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 16","termid":"PBO:0070310"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:28408491","PMID:29931097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007005","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: GO:0035666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor where the TRIF adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:12855817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRIF-dependent toll-like receptor signaling pathway","synonyms":[{"name":"TRIF-dependent TLR signaling pathway","type":"exact"},{"name":"TRIF-dependent toll-like receptor signalling pathway","type":"exact"},{"name":"Toll/IL-1 receptor (TIR) domain-containing adaptor-dependent TLR signaling pathway","type":"exact"}],"termid":"GO:0035666"}


id: GO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of megakaryocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of megakaryocyte differentiation","termid":"GO:0045652"},{"relation_name":"positively_regulates","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of megakaryocyte differentiation","synonyms":[{"name":"activation of megakaryocyte differentiation","type":"narrow"},{"name":"stimulation of megakaryocyte differentiation","type":"narrow"},{"name":"up regulation of megakaryocyte differentiation","type":"exact"},{"name":"up-regulation of megakaryocyte differentiation","type":"exact"},{"name":"upregulation of megakaryocyte differentiation","type":"exact"}],"termid":"GO:0045654"}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: GO:2000281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-T3 phosphorylation.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-T3 phosphorylation (obsolete GO:2000281)","termid":"GO:2000281"}


id: GO:0070346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of fat cell proliferation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"positively_regulates","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell proliferation","synonyms":[{"name":"activation of fat cell proliferation","type":"narrow"},{"name":"positive regulation of adipocyte proliferation","type":"exact"},{"name":"positive regulation of adipose cell proliferation","type":"exact"},{"name":"stimulation of fat cell proliferation","type":"narrow"},{"name":"up regulation of fat cell proliferation","type":"exact"},{"name":"up-regulation of fat cell proliferation","type":"exact"},{"name":"upregulation of fat cell proliferation","type":"exact"}],"termid":"GO:0070346"}


id: GO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TRAIL (TNF-related apoptosis inducing ligand), a member of the tumor necrosis factor ligand family that rapidly induces apoptosis in a variety of transformed cell lines.","definition_xrefs":["PMID:9082980","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TRAIL binding","synonyms":[{"name":"Apo-2L binding","type":"exact"}],"termid":"GO:0045569"}


id: PBO:0063489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1","termid":"PBO:0063489"}


id: PR:O94384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ely5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein ely5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.06c","synonyms":[{"name":"Spom972h-ely5","type":"exact"}],"termid":"PR:O94384"}


id: PBO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen gamma chain","termid":"PBO:0047589"}


id: GO:0150056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 1. Amylin receptor complex 1 (AMY1) also serves as a receptor for the calcitonin related peptide (CGRP) and adrenomedullin (AM/ADM).","definition_xrefs":["PMID:22500019","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex 1","synonyms":[{"name":"AMY1 complex","type":"exact"}],"termid":"GO:0150056"}


id: PATO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cuscpidate quality inhering in a bearer by virtue of the bearer possessing two cusps.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicuspidate","termid":"PATO:0002257"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biscupidate","synonyms":[{"name":"bicuspid","type":"exact"}],"termid":"PATO:0002281"}


id: GO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone.","definition_xrefs":["PMID:21901110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral bone morphogenesis","termid":"GO:0061974"}


id: PBO:0077515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 231","termid":"PBO:0077515"}


id: PBO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein C2","termid":"PBO:0060239"}


id: PBO:0086878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcriptional repressor with Zn(2)-Cys(6) finger; negatively regulates transcription in response to oleate levels, based on mutant phenotype and localization to oleate-responsive promoters; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; forms nuclear foci upon DNA replication stress","termid":"PBO:0086878"}


id: PBO:0036367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates (predicted)","termid":"PBO:0036367"}


id: GO:1905322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["PMID:26846297","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell migration","synonyms":[{"name":"activation of mesenchymal stem cell migration","type":"narrow"},{"name":"up regulation of mesenchymal stem cell migration","type":"exact"},{"name":"up-regulation of mesenchymal stem cell migration","type":"exact"},{"name":"upregulation of mesenchymal stem cell migration","type":"exact"}],"termid":"GO:1905322"}


id: MOD:01136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate","termid":"MOD:01136"}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: PBO:0113040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone for eEF1A; ribosome-associated chaperone dedicated to facilitating high-level expression of eEF1A; transiently binds nascent GTPase domain of eEF1A as soon as it emerges from ribosome tunnel; forms complex with NAC by binding UBA domain of Egd2p; inactivation results in disturbed proteostasis and Hsf1p activation due to abberant eEF1A biogenesis; overlapping phenotypes support notion that Chp1p functions in same eEF1A biogenesis pathway as chaperone Zpr1p-Aim29p","termid":"PBO:0113040"}


id: GO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.","definition_xrefs":["GOC:ef","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antibiotic","synonyms":[{"name":"antibiotic susceptibility/resistance","type":"related"}],"termid":"GO:0046677"}


id: PBO:0075970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 10","termid":"PBO:0075970"}


id: FYPO:0000109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to papulacandin B. Cells stop growing (and may die) at a concentration of papulacandin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to papulacandin B","synonyms":[{"name":"hypersensitive to papulacandin B","type":"exact"},{"name":"sensitive to papulacandin B during mitotic cell cycle","type":"related"},{"name":"sensitive to papulacandin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000109"}


id: PBO:0079434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 2","termid":"PBO:0079434"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: PBO:0053259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF interleukin 6 family cytokine","termid":"PBO:0053259"}


id: PBO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fip1","termid":"PBO:0000366"}


id: PBO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 6","termid":"PBO:0052638"}


id: PBO:0056392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase binding protein 1","termid":"PBO:0056392"}


id: PBO:0087026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L12B; rpl12a rpl12b double mutant exhibits slow growth and slow translation; homologous to mammalian ribosomal protein L12 and bacterial L11; RPL12B has a paralog, RPL12A, that arose from the whole genome duplication","termid":"PBO:0087026"}


id: PBO:0087198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog","termid":"PBO:0087198"}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: GO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal sensitivity/resistance (obsolete GO:0009634)","synonyms":[{"name":"heavy metal sensitivity/resistance","type":"exact"}],"termid":"GO:0009634"}


id: PBO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 2","termid":"PBO:0060252"}


id: GO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"positively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"positive regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"positive regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080038"}


id: PBO:0059163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercaptopyruvate sulfurtransferase","termid":"PBO:0059163"}


id: PBO:0076324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin","termid":"PBO:0076324"}


id: PBO:0062773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 55 subfamily B member 1 pseudogene","termid":"PBO:0062773"}


id: FYPO:0003239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphodiesterase I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal phosphodiesterase I activity","termid":"FYPO:0003239"}


id: GO:0098899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the spine apparatus membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spine apparatus lumen","termid":"GO:0098899"}


id: PBO:0052385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF25 antisense RNA 1","termid":"PBO:0052385"}


id: GO:0005261
data:
  {"annotated_genes":["SJAG_05229","SJAG_02598","SJAG_02532","SJAG_04122","SJAG_02019","SJAG_03895","SJAG_04668","SJAG_02105","SJAG_00133","SJAG_01471","SJAG_00542","SJAG_07003","SJAG_00985","SJAG_00915","SJAG_03925","SJAG_02322","SJAG_MIT37","SJAG_00836","SJAG_01090","SJAG_02877","SJAG_02564","SJAG_MIT15","SJAG_05342","SJAG_MIT09","SJAG_05204","SJAG_03114","SJAG_00438"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88505,91791,95725,88447,110505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[92089,105450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[95726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[99866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[88954,115108,88955,89975,90949,85261,111913,89377,104867,97912,99784,99755,103894,103983,92722,115097,99129,101083,115103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[88448,88506,110003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a monoatomic cation through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dph","GOC:pr","GOC:mtg_transport","ISBN:0815340729","GOC:def"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01471":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9712190","Reactome:R-HSA-1168376","Reactome:R-HSA-169683","Reactome:R-HSA-9754616","Reactome:R-HSA-9837835","Reactome:R-HSA-426223","Reactome:R-HSA-2089943","GO:0015281","Reactome:R-HSA-1296043","Reactome:R-HSA-4420052","Reactome:R-HSA-9706720","GO:0015338"],"synonyms":[{"name":"cation channel activity","type":"broad"},{"name":"cation diffusion facilitator activity","type":"exact"},{"name":"non-selective cation channel activity","type":"narrow"}],"termid":"GO:0005261","terms_by_termid":{"GO:0005227":null,"GO:0005262":null,"GO:0008331":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: GO:0001088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIE class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIE-class binding (obsolete GO:0001088)","synonyms":[{"name":"TFIIE-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001088"}


id: PBO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 12 (pseudogene)","termid":"PBO:0045601"}


id: PBO:0060914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 1","termid":"PBO:0060914"}


id: PBO:0058586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6719","termid":"PBO:0058586"}


id: GO:0035491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the synthesis or release of any leukotriene following a stimulus as part of an inflammatory response.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukotriene production involved in inflammatory response","termid":"GO:0035490"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"leukotriene production involved in inflammatory response","termid":"GO:0002540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukotriene production involved in inflammatory response","termid":"GO:0035491"}


id: FYPO:0004687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lovastatin. Cells stop growing (and may die) at a concentration of lovastatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lovastatin","synonyms":[{"name":"hypersensitive to lovastatin","type":"exact"},{"name":"sensitive to lovastatin during mitotic cell cycle","type":"related"},{"name":"sensitive to lovastatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004687"}


id: GO:0019776
data:
  {"annotated_genes":["SJAG_03136","SJAG_06309","SJAG_01561"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86208,105852,106353],"is_not":false,"summary":null,"term":"GO:0019776"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent attachment of the ubiquitin-like protein Atg8 family modifier to phosphatidylethanolamine or phosphatidylserine on a membrane.","definition_xrefs":["PMID:12826404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01561":null,"SJAG_03136":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016746","GO:0016740","GO:0019787"],"is_obsolete":false,"name":"Atg8-family ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5681981"],"synonyms":[{"name":"APG8 ligase activity","type":"exact"},{"name":"Atg8 ligase activity","type":"narrow"},{"name":"Atg8-like ligase activity","type":"exact"}],"termid":"GO:0019776","terms_by_termid":{"GO:0019776":null}}


id: GO:0098859
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked actin filaments that is part of an actin-based cell protrusion, in which filaments are oriented such that the plus (barbed) ends are at the tip of the protrusion, capped by a tip complex which stabilizes the filaments.","definition_xrefs":["PMID:12566431","PMID:15661519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallel actin filament bundle","termid":"GO:0097518"},{"relation_name":"part_of","term_name":"actin-based cell projection","termid":"GO:0098858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"}


id: GO:0019730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against microbes mediated through a body fluid. Examples of this process are seen in the antimicrobial humoral response of Drosophila melanogaster and Mus musculus.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"humoral immune response","termid":"GO:0006959"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antimicrobial humoral response","secondary_identifiers":["GO:0019735","GO:0006960"],"termid":"GO:0019730"}


id: PBO:0027730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027730"}


id: GO:0102408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanedioyl-CoA + sn-glycerol 3-phosphate = coenzyme A + sn-2-C16:0-DCA-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (obsolete GO:0102408)","termid":"GO:0102408"}


id: PBO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group PABLB member 1, envelope","termid":"PBO:0046615"}


id: GO:0006281
data:
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id: GO:2001292
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id: PBO:0083786
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id: GO:0023070
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id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: PBO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 7","termid":"PBO:0052104"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: PBO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 5","termid":"PBO:0047478"}


id: PBO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.20.4.1","termid":"PBO:0005615"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: GO:0100056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100056)","termid":"GO:0100056"}


id: GO:0009230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006766","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"thiamine catabolic process","synonyms":[{"name":"thiamin catabolic process","type":"exact"},{"name":"thiamine breakdown","type":"exact"},{"name":"thiamine catabolism","type":"exact"},{"name":"thiamine degradation","type":"exact"},{"name":"vitamin B1 catabolic process","type":"exact"},{"name":"vitamin B1 catabolism","type":"exact"}],"termid":"GO:0009230"}


id: GO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-amorpha-4,11-diene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = (+)-artemisinate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:23246612","RHEA:32999","PMID:16612385","PMID:16458889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"amorpha-4,11-diene 12-monooxygenase activity","secondary_identifiers":["EC:1.14.14.114"],"termid":"GO:0062150"}


id: GO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the tricuspid valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular valve formation","termid":"GO:0003190"},{"relation_name":"part_of","term_name":"tricuspid valve morphogenesis","termid":"GO:0003186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricuspid valve formation","termid":"GO:0003195"}


id: GO:0032821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell proliferation","termid":"GO:0032818"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"down-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"downregulation of natural killer cell proliferation during immune response","type":"related"},{"name":"inhibition of natural killer cell proliferation during immune response","type":"narrow"},{"name":"negative regulation of NK cell proliferation during immune response","type":"related"},{"name":"negative regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032821"}


id: GO:0007303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of cytoplasmic constituents synthesized in the nurse cells to the oocyte.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic transport, nurse cell to oocyte (obsolete GO:0007303)","termid":"GO:0007303"}


id: FYPO:0005075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of anaphase-promoting complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased anaphase-promoting complex assembly","synonyms":[{"name":"decreased APC assembly","type":"exact"},{"name":"decreased anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased anaphase-promoting complex assembly during vegetative growth","type":"exact"},{"name":"reduced anaphase-promoting complex formation","type":"exact"}],"termid":"FYPO:0005075"}


id: PBO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsk1 Interacting Molecule","termid":"PBO:0012860"}


id: GO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"is_a","term_name":"reproductive system development","termid":"GO:0061458"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia development","synonyms":[{"name":"male genital development","type":"exact"}],"termid":"GO:0030539"}


id: GO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["InterPro:IPR000701","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (obsolete GO:0045281)","termid":"GO:0045281"}


id: FYPO:0000844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mercaptoethanol. Cells stop growing (and may die) at a concentration of mercaptoethanol that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to mercaptoethanol","synonyms":[{"name":"hypersensitive to mercaptoethanol","type":"exact"},{"name":"sensitive to 2-sulfanylethanol","type":"exact"},{"name":"sensitive to mercaptoethanol during mitotic cell cycle","type":"related"},{"name":"sensitive to mercaptoethanol during vegetative growth","type":"exact"}],"termid":"FYPO:0000844"}


id: GO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UDP + dolichyl N-acetyl-alpha-D-glucosaminyl phosphate.","definition_xrefs":["EC:2.4.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"dolichyl-phosphate alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["GO:0004101","RHEA:14693","MetaCyc:2.4.1.153-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate alpha-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichol phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichol phosphate acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0004166"}


id: PBO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 7 pseudogene 1","termid":"PBO:0043469"}


id: PBO:0027727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_micafungin","termid":"PBO:0027727"}


id: PBO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_microtubules","termid":"PBO:0031375"}


id: PBO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube_and_fragmented_nucleus","termid":"PBO:0034609"}


id: PBO:0042742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPP pseudogene 1","termid":"PBO:0042742"}


id: GO:0034554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,3',5-tribromobisphenol A + 2 H+ + 2 e- = 3,3'-dibromobisphenol A + HBr.","definition_xrefs":["UM-BBD_reactionID:r0842"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,3',5-tribromobisphenol A reductive dehalogenase activity (obsolete GO:0034554)","termid":"GO:0034554"}


id: GO:0061227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in mesonephros development","synonyms":[{"name":"mesonephros pattern formation","type":"related"},{"name":"mesonephros pattern specification","type":"exact"}],"termid":"GO:0061227"}


id: GO:1904060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of locomotor rhythm.","definition_xrefs":["GOC:TermGenie","PMID:16310969","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of locomotor rhythm","termid":"GO:1904059"},{"relation_name":"negatively_regulates","term_name":"locomotor rhythm","termid":"GO:0045475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of locomotor rhythm","synonyms":[{"name":"down regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down regulation of locomotor rhythm","type":"exact"},{"name":"down-regulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"down-regulation of locomotor rhythm","type":"exact"},{"name":"downregulation of circadian locomotor activity rhythm","type":"narrow"},{"name":"downregulation of locomotor rhythm","type":"exact"},{"name":"inhibition of circadian locomotor activity rhythm","type":"narrow"},{"name":"inhibition of locomotor rhythm","type":"narrow"},{"name":"negative regulation of circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:1904060"}


id: FYPO:0005486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased iron-sulfur cluster binding","synonyms":[{"name":"increased iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0005486"}


id: PBO:0074877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 58B","termid":"PBO:0074877"}


id: PBO:0028915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heavy_metal_stress","termid":"PBO:0028915"}


id: PBO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: PBO:0085698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retention of membrane proteins; including Sec12p, in the ER; localized to Golgi; functions as a retrieval receptor in returning membrane proteins to the ER","termid":"PBO:0085698"}


id: PBO:0069655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 932, pseudogene","termid":"PBO:0069655"}


id: GO:0097723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of an amoeboid sperm cell.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amoeboid sperm motility","synonyms":[{"name":"ameboid sperm motility","type":"exact"},{"name":"ameboid sperm movement","type":"exact"},{"name":"amoeboid sperm movement","type":"exact"}],"termid":"GO:0097723"}


id: GO:0009896
data:
  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process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"positively_regulates","term_name":"catabolic 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regulation of catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of catabolic process","type":"narrow"},{"name":"positive regulation of breakdown","type":"exact"},{"name":"positive regulation of catabolism","type":"exact"},{"name":"positive regulation of degradation","type":"exact"},{"name":"stimulation of catabolic process","type":"narrow"},{"name":"up regulation of catabolic process","type":"exact"},{"name":"up-regulation of catabolic process","type":"exact"},{"name":"upregulation of catabolic process","type":"exact"}],"termid":"GO:0009896","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0010508":null,"GO:0016239":null,"GO:0032436":null,"GO:0036450":null,"GO:0045732":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1903599":null,"GO:1904352":null,"GO:1905786":null,"GO:1990074":null,"GO:2000786":null}}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: GO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of a L-amino acid into its enantiomer, the corresponding D-amino acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"},{"relation_name":"is_a","term_name":"chiral amino acid racemization","termid":"GO:0018366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}


id: PBO:0055036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2451","termid":"PBO:0055036"}


id: PBO:0042868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 pseudogene 1","termid":"PBO:0042868"}


id: GO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate.","definition_xrefs":["EC:2.7.1.94","MetaCyc:ACYLGLYCEROL-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"acylglycerol kinase activity","secondary_identifiers":["Reactome:R-HSA-5696074","RHEA:19293"],"synonyms":[{"name":"ATP:acylglycerol 3-phosphotransferase activity","type":"related"},{"name":"MGK","type":"related"},{"name":"monoacylglycerol kinase (phosphorylating)","type":"related"},{"name":"monoacylglycerol kinase activity","type":"related"},{"name":"monoglyceride kinase activity","type":"related"},{"name":"monoglyceride phosphokinase activity","type":"related"},{"name":"sn-2-monoacylglycerol kinase activity","type":"related"}],"termid":"GO:0047620"}


id: PBO:0034360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_evidence_or_inference_to","termid":"PBO:0034360"}


id: PR:O13957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.16c","synonyms":[{"name":"Spom972h-SPAC23H4.16c","type":"exact"}],"termid":"PR:O13957"}


id: GO:0014048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of glutamate.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"glutamate secretion","termid":"GO:0014047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of glutamate secretion","termid":"GO:0014048"}


id: FYPO:0003775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination between cDNAs derived from transposon-encoded genes is decreased.","definition_xrefs":["PomBase:mah","PMID:10022921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased transposon-derived cDNA recombination","synonyms":[{"name":"decreased recombination of transposon-derived cDNAs","type":"exact"},{"name":"decreased transposon-derived cDNA recombination frequency","type":"exact"},{"name":"decreased transposon-derived cDNA recombination rate","type":"related"},{"name":"reduced transposon-derived cDNA recombination","type":"exact"}],"termid":"FYPO:0003775"}


id: PBO:0048426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATD1 divergent transcript","termid":"PBO:0048426"}


id: GO:0071054
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM3.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM3 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM3 complex","type":"narrow"}],"termid":"GO:0071054"}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_04387","SJAG_04003","SJAG_03073","SJAG_03673","SJAG_02737","SJAG_02509","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97535,100109,103508,105692,108209,110027,113014],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["GOC:vw","PMID:11309419","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: PBO:0040628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell scaffold protein with ankyrin repeats 1","termid":"PBO:0040628"}


id: GO:1901511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactone catabolic process","termid":"GO:1901335"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(-)-microperfuranone metabolic process","termid":"GO:1901510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone catabolic process","synonyms":[{"name":"(-)-microperfuranone breakdown","type":"exact"},{"name":"(-)-microperfuranone catabolism","type":"exact"},{"name":"(-)-microperfuranone degradation","type":"exact"}],"termid":"GO:1901511"}


id: PBO:0066110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 2","termid":"PBO:0066110"}


id: PBO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson's disease","termid":"PBO:0001074"}


id: PBO:0046739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 5","termid":"PBO:0046739"}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: PBO:0071004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 6","termid":"PBO:0071004"}


id: PBO:0043232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3 pseudogene 1","termid":"PBO:0043232"}


id: PBO:0077997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 1","termid":"PBO:0077997"}


id: PBO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN2 pseudogene 1","termid":"PBO:0047704"}


id: PBO:0025454
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase deficiency","termid":"PBO:0025454"}


id: FYPO:0004518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, branched, elongated cell","termid":"FYPO:0002170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004518"}


id: MOD:01241
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-aspartic acid 4-methyl ester.","definition_xrefs":["OMSSA:19","PubMed:12185208","Unimod:298#D"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-aspartic acid 4-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyld","type":"exact"}],"termid":"MOD:01241"}


id: SO:0000401
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_attribute","synonyms":[{"name":"gene attribute","type":"exact"}],"termid":"SO:0000401"}


id: GO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:8088535"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0004317)","synonyms":[{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming)","type":"exact"},{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity","type":"exact"}],"termid":"GO:0004317"}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: GO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection that is a short, rounded projection from a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plant cell papilla","termid":"GO:0090395"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: PBO:0090576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23","termid":"PBO:0090576"}


id: GO:1902998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:TermGenie","PMID:15897157","GOC:sjp","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"positively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurofibrillary tangle assembly","synonyms":[{"name":"activation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"activation of neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of neurofibrillary tangle formation","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of neurofibrillary tangle formation","type":"exact"},{"name":"positive regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"upregulation of neurofibrillary tangle formation","type":"exact"},{"name":"upregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902998"}


id: PBO:0067348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 445, pseudogene","termid":"PBO:0067348"}


id: GO:0022848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Selectively enables the transmembrane transfer of a cation by a channel that opens upon binding acetylcholine.","definition_xrefs":["GOC:mah","PMID:2466967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:1904315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"acetylcholine-gated monoatomic cation-selective channel activity","secondary_identifiers":["GO:0004889","GO:0016904"],"synonyms":[{"name":"acetylcholine-activated cation-selective channel activity","type":"exact"},{"name":"acetylcholine-gated cation channel activity","type":"exact"},{"name":"acetylcholine-gated cation-selective channel activity","type":"broad"},{"name":"ionotropic acetylcholine receptor activity","type":"exact"},{"name":"nAChR","type":"exact"},{"name":"nicotinergic acetylcholine receptor activity","type":"exact"},{"name":"nicotinic acetylcholine-activated cation-selective channel activity","type":"exact"}],"termid":"GO:0022848"}


id: GO:0014828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The distal stomach is composed of the lower body and antrum and develops strong peristaltic phasic contractions that increase in amplitude as they propagate toward the pylorus.","definition_xrefs":["PMID:30252381","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}


id: PBO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 2","termid":"PBO:0075511"}


id: PBO:0004626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Dnt1","termid":"PBO:0004626"}


id: GO:0003101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which epinephrine-norepinephrine modulate the force with which blood passes through the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by circulatory epinephrine-norepinephrine","synonyms":[{"name":"regulation of blood pressure by circulating adrenaline-noradrenaline","type":"related"}],"termid":"GO:0003101"}


id: GO:0005691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U6atac, the Lsm2-8 heptameric ring complex, as well as several proteins that are unique to the U6atac snRNP, most of which remain associated with the U6atac snRNA both while the U6atac snRNP is free or assembled into the U4atac/U6atac snRNP or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U6atac snRNP","synonyms":[{"name":"snRNP U6atac","type":"exact"}],"termid":"GO:0005691"}


id: GO:1901171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of naphthalene.","definition_xrefs":["UniPathway:UPA00082","GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene biosynthetic process (obsolete GO:1901171)","synonyms":[{"name":"naphthalene anabolism","type":"exact"},{"name":"naphthalene biosynthesis","type":"exact"},{"name":"naphthalene formation","type":"exact"},{"name":"naphthalene synthesis","type":"exact"}],"termid":"GO:1901171"}


id: PBO:0088150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuole membrane protein that interacts with Atg8p; functions in the vacuolar membrane recruitment of Atg8p to facilitate the degradation of vacuolar integral membrane proteins during early-stationary vacuole turnover (EVT), a general degradation process for vacuolar integral membrane proteins when cells enter stationary phase; null mutant is defective in stationary phase-induced vacuolar microdomain formation; homolog of S. pombe hfl1; homolog of human TMEM184","termid":"PBO:0088150"}


id: GO:0014736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle atrophy","termid":"GO:0014735"},{"relation_name":"is_a","term_name":"negative regulation of muscle adaptation","termid":"GO:0014745"},{"relation_name":"negatively_regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle atrophy","termid":"GO:0014736"}


id: FYPO:0004154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to heat","synonyms":[{"name":"normal protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0004154"}


id: FYPO:0004622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which mitotic spindle disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle disassembly","termid":"FYPO:0004621"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished mitotic spindle disassembly","synonyms":[{"name":"abolished mitotic spindle disassembly during vegetative growth","type":"exact"},{"name":"abolished spindle disassembly during mitotic cell cycle","type":"related"},{"name":"spindle disassembly involved in mitosis abolished","type":"exact"}],"termid":"FYPO:0004622"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: PBO:0015223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II alpha subunit Gls2","termid":"PBO:0015223"}


id: GO:0033244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of penicillin metabolic process","synonyms":[{"name":"regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033244"}


id: PBO:0065535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 2","termid":"PBO:0065535"}


id: FYPO:0005548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to brefeldin A","synonyms":[{"name":"increased protein phosphorylation during cellular response to brefeldin A during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0005548"}


id: FYPO:0004116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a diameter larger than normal only near the middle of the cell, around the nucleus.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell enlarged around nucleus","synonyms":[{"name":"inviable after spore germination, undivided cell, cell enlarged around nucleus","type":"exact"},{"name":"inviable following spore germination, without cell division, cell enlarged around nucleus","type":"exact"},{"name":"inviable germinated spore, without cell division, cell enlarged around nucleus","type":"exact"},{"name":"lethal after spore germination, without cell division, cell enlarged around nucleus","type":"exact"}],"termid":"FYPO:0004116"}


id: PBO:0036557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase Put1 (predicted)","termid":"PBO:0036557"}


id: PBO:0072938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 18","termid":"PBO:0072938"}


id: GO:0102931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (Z,E)-alpha-farnesene + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:17140613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(Z,E)-alpha- farnesene synthase activity","secondary_identifiers":["MetaCyc:RXN-8931"],"termid":"GO:0102931"}


id: FYECO:0000272
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[115567,115555],"is_not":false,"summary":null,"term":"FYECO:0000272"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with no nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"glucose MM, no nitrogen","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"termid":"FYECO:0000272","terms_by_termid":{"FYECO:0000272":null,"FYPO_EXT:0000001":null}}


id: PR:O59806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC550.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C550.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.08","synonyms":[{"name":"Spom972h-SPCC550.08","type":"exact"}],"termid":"PR:O59806"}


id: GO:0120049
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91295],"is_not":false,"summary":null,"term":"GO:0120049"}]},"cv_name":"biological_process","definition":"The posttranscriptional N6-methylation of an adenine residue in an snRNA molecule.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0010467","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"snRNA (adenine-N6)-methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120049","terms_by_termid":{"GO:0120049":null}}


id: GO:0043078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of two nuclei located centrally in a flowering plant embryo sac that eventually fuse to form the endosperm nucleus.","definition_xrefs":["ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"polar nucleus","termid":"GO:0043078"}


id: PBO:0109514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCP nuclear cofactor family member 1","termid":"PBO:0109514"}


id: GO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment that occurs after cell fate specification, in which a cell is irreversibly committed to a cellular developmental fate which is heritable on cell division.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination","secondary_identifiers":["Wikipedia:Cell_fate_determination"],"termid":"GO:0001709"}


id: PBO:0016889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug121","termid":"PBO:0016889"}


id: PBO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-47","termid":"PBO:0051411"}


id: GO:0005365
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88669,94152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of myo-inositol from one side of a membrane to the other. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"myo-inositol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vitamin Bh transporter activity","type":"exact"}],"termid":"GO:0005365","terms_by_termid":{"GO:0005366":null}}


id: PBO:0028757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1_phase_entry_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028757"}


id: PBO:0088631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44","termid":"PBO:0088631"}


id: GO:1902867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:16872597","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"negatively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retina development in camera-type eye","synonyms":[{"name":"down regulation of retina development in camera-style eye","type":"exact"},{"name":"down regulation of retina development in camera-type eye","type":"exact"},{"name":"down regulation of retinal development","type":"related"},{"name":"down-regulation of retina development in camera-style eye","type":"exact"},{"name":"down-regulation of retina development in camera-type eye","type":"exact"},{"name":"down-regulation of retinal development","type":"related"},{"name":"downregulation of retina development in camera-style eye","type":"exact"},{"name":"downregulation of retina development in camera-type eye","type":"exact"},{"name":"downregulation of retinal development","type":"related"},{"name":"inhibition of retina development in camera-style eye","type":"narrow"},{"name":"inhibition of retina development in camera-type eye","type":"narrow"},{"name":"inhibition of retinal development","type":"related"},{"name":"negative regulation of retina development in camera-style eye","type":"exact"},{"name":"negative regulation of retinal development","type":"related"}],"termid":"GO:1902867"}


id: GO:0102983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-xylose + a homogalacturonan = UDP + 4 H+ + a xylogalacturonan.","definition_xrefs":["GOC:pz","EC:2.4.2.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"xylogalacturonan beta-1,3-xylosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9589"],"termid":"GO:0102983"}


id: GO:2000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of anterior head development","termid":"GO:2000742"},{"relation_name":"positively_regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterior head development","termid":"GO:2000744"}


id: FYPO:0007103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles during meiosis I, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PMID:22292001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle collapse","termid":"FYPO:0007083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"spindle collapse during meiosis I","synonyms":[{"name":"broken spindle during meiosis I","type":"related"},{"name":"meiotic spindle collapse during meiosis I","type":"exact"},{"name":"spindle breakage during meiosis I","type":"related"},{"name":"spindle collapse during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007103"}


id: PR:O13639
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenosylhomocysteinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23420:SF0","OMA:SCHPO02844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.18c","secondary_identifiers":["UniProtKB:O13639"],"synonyms":[{"name":"AdoHcyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-adenosyl-L-homocysteine hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AHCY","type":"exact"}],"termid":"PR:O13639"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["DeltaMass:0","PubMed:10747868","Unimod:452","PubMed:1680872","RESID:AA0202#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: PBO:0054237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1619","termid":"PBO:0054237"}


id: PBO:0070644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 15","termid":"PBO:0070644"}


id: GO:0043493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a large and small subunit which catalyze the packaging of DNA into viral heads. Note that not all viral terminases have this structure, some exist as single polypeptides.","definition_xrefs":["GOC:mlg","GOC:bf","GOC:jl","PMID:18687036","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral terminase complex","synonyms":[{"name":"phage terminase complex","type":"narrow"},{"name":"virus terminase complex","type":"exact"}],"termid":"GO:0043493"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-dependent peptide secondary active transmembrane transporter activity (obsolete GO:0022897)","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: GO:0071051
data:
  {"annotated_genes":["SJAG_03745","SJAG_00854","SJAG_03179","SJAG_04153","SJAG_01521","SJAG_04321","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88350,89173,92023,93358,98179,102539,111507],"is_not":false,"summary":null,"term":"GO:0071051"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a snoRNA molecule linked to prior polyadenylation of the 3'-end of the precursor snoRNA.","definition_xrefs":["PMID:18951092","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04153":null,"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"poly(A)-dependent snoRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"polyadenylation-dependent snoRNA 3'-end processing","type":"exact"},{"name":"sno(s)RNA polyadenylation","type":"narrow"}],"termid":"GO:0071051","terms_by_termid":{"GO:0071051":null}}


id: GO:0099641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"axo-dendritic protein transport","termid":"GO:0099640"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"anterograde axonal protein transport","synonyms":[{"name":"anterograde axon cargo transport","type":"broad"}],"termid":"GO:0099641"}


id: GO:0043041
data:
  {"annotated_genes":["SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90208],"is_not":false,"summary":null,"term":"GO:0043041"}]},"cv_name":"biological_process","definition":"Activation of an amino acid for incorporation into a peptide by a nonribosomal process.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid activation","termid":"GO:0043038"},{"relation_name":"part_of","term_name":"nonribosomal peptide biosynthetic process","termid":"GO:0019184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid activation for nonribosomal peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nonribosomal amino acid activation","type":"related"}],"termid":"GO:0043041","terms_by_termid":{"GO:0043041":null}}


id: PBO:0047052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111 trypsin like peptidase B","termid":"PBO:0047052"}


id: GO:1904808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oxidation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein oxidation","termid":"GO:1904806"},{"relation_name":"positively_regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein oxidation","synonyms":[{"name":"activation of protein amino acid oxidation","type":"narrow"},{"name":"activation of protein oxidation","type":"narrow"},{"name":"positive regulation of protein amino acid oxidation","type":"exact"},{"name":"up regulation of protein amino acid oxidation","type":"exact"},{"name":"up regulation of protein oxidation","type":"exact"},{"name":"up-regulation of protein amino acid oxidation","type":"exact"},{"name":"up-regulation of protein oxidation","type":"exact"},{"name":"upregulation of protein amino acid oxidation","type":"exact"},{"name":"upregulation of protein oxidation","type":"exact"}],"termid":"GO:1904808"}


id: GO:0033792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a 3alpha-hydroxy bile acid CoA + NAD+ = a 3-oxo bile acid CoA + H+ + NADH.","definition_xrefs":["RHEA:55380","PMID:23836456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3alpha-hydroxy bile acid-CoA-ester 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.395"],"synonyms":[{"name":"7alpha-dehydroxylase activity","type":"related"},{"name":"bile acid 7-dehydroxylase activity","type":"related"},{"name":"bile-acid 7alpha-dehydroxylase activity","type":"related"},{"name":"cholate 7alpha-dehydroxylase activity","type":"related"}],"termid":"GO:0033792"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: FYPO:0006928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which one or both nuclear membrane(s) form blebs. Membrane blebbing usually leads to decreases in nuclear size and the nucleus:cytoplasm volume ratio.","definition_xrefs":["PomBase:mah","PMID:31015410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during vegetative growth","termid":"FYPO:0000769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"nuclear membrane blebbing","synonyms":[{"name":"nuclear envelope blebbing","type":"related"},{"name":"nuclear membrane blebbing during mitotic cell cycle","type":"related"},{"name":"nuclear membrane blebbing during vegetative growth","type":"exact"}],"termid":"FYPO:0006928"}


id: GO:0097279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Histamine release triggered by the binding of an antigen to an IgE immunoglobulin bound to the cell surface. An example is mast cell histamine degranulation as a result of exposure of mast cell-bound IgE to alder tree pollen.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion mediated by immunoglobulin","termid":"GO:0097280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"histamine secretion mediated by IgE immunoglobulin","synonyms":[{"name":"Ig-mediated histamine release","type":"broad"},{"name":"histamine secretion mediated by IgE antibody","type":"exact"}],"termid":"GO:0097279"}


id: PBO:0049359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 17","termid":"PBO:0049359"}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["UniProtKB:O14287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: PBO:0028894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-circularized_chromosome_during_mitotic_G1_phase","termid":"PBO:0028894"}


id: PBO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 6","termid":"PBO:0048506"}


id: FYPO:0003873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered cellular reactive oxygen species level","termid":"FYPO:0002142"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased reactive oxygen species level during G0","synonyms":[{"name":"increased cellular ROS level during G0","type":"exact"},{"name":"increased reactive oxygen species accumulation during G0","type":"related"},{"name":"increased reactive oxygen species level during cell quiescence","type":"exact"},{"name":"increased reactive oxygen species level during quiescence","type":"exact"}],"termid":"FYPO:0003873"}


id: GO:0042031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of angiotensin-converting enzyme, thereby preventing the synthesis of angiotensin II from its precursor, angiotensin I.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete angiotensin-converting enzyme inhibitor activity (obsolete GO:0042031)","synonyms":[{"name":"ACE inhibitor","type":"exact"},{"name":"angiotensin-converting enzyme inhibitor activity","type":"exact"},{"name":"peptidyl dipeptidase A inhibitor","type":"exact"}],"termid":"GO:0042031"}


id: GO:0043253
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribosome contained within a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ribosome","termid":"GO:0009547"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast ribosome","termid":"GO:0043253"}


id: GO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanol, 2-methylbutanol, or 2-methylpropanol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to alcohol via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to alcohol via Ehrlich pathway","type":"exact"}],"termid":"GO:0000950"}


id: PR:A6X972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gon7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit gon7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.18","synonyms":[{"name":"Spom972h-gon7","type":"exact"}],"termid":"PR:A6X972"}


id: PBO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1 (predicted)","termid":"PBO:0002209"}


id: GO:1902687
data:
  {"annotated_genes":["SJAG_03535","SJAG_03280"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83518,114560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of glucosidase activity.","definition_xrefs":["PMID:23826932","GOC:TermGenie","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03280":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucosidase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902687","terms_by_termid":{"GO:0017177":null}}


id: PBO:0042130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 1","termid":"PBO:0042130"}


id: PBO:0081229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 10","termid":"PBO:0081229"}


id: PBO:0029802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cables","termid":"PBO:0029802"}


id: GO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the forms of vitamin K, quinone-derived vitamins which are involved in the synthesis of blood-clotting factors in mammals. Vitamin K substances share a methylated naphthoquinone ring structure and vary in the aliphatic side chains attached to the molecule.","definition_xrefs":["GOC:jl","PMID:24489112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin K metabolic process","synonyms":[{"name":"naphthoquinone metabolic process","type":"broad"},{"name":"naphthoquinone metabolism","type":"broad"},{"name":"vitamin K metabolism","type":"exact"}],"termid":"GO:0042373"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: PBO:0080190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor C","termid":"PBO:0080190"}


id: GO:0072191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the ureter over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle tissue development","termid":"GO:0048745"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle development","termid":"GO:0072191"}


id: FYPO:0001235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth in a cell population occurs to a lower extent than normal, i.e. the population stops growing earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"decreased extent of cell population growth","synonyms":[{"name":"reduced extent of cell population growth","type":"exact"}],"termid":"FYPO:0001235"}


id: GO:0102431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (5Z,9Z,12Z)-octadecatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid) and add a fourth double bond (a (5Z,9Z,12Z,15Z)-octadecatetraenoyl-containing glycerolipid).","definition_xrefs":["EC:1.14.19.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid omega-(9-4) desaturase activity","secondary_identifiers":["GO:0102430","MetaCyc:RXN-13857","MetaCyc:RXN-13858"],"synonyms":[{"name":"acyl-lipid omega-(9-4) desaturase","type":"exact"},{"name":"alpha-linolenate delta5 desaturase activity","type":"narrow"},{"name":"linoleate delta5 desaturase activity","type":"related"}],"termid":"GO:0102431"}


id: PBO:0091872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl3","termid":"PBO:0091872"}


id: GO:1903639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"}


id: GO:0016505
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a peptidase that is involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:rl","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"peptidase activator activity involved in apoptotic process","synonyms":[{"name":"apoptotic protease activator activity","type":"narrow"}],"termid":"GO:0016505"}


id: GO:0007385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the abdominal segments following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, trunk","termid":"GO:0035292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, abdomen","termid":"GO:0007385"}


id: PBO:0057191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 363","termid":"PBO:0057191"}


id: PBO:0082774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU; required for pre-18S rRNA processing, biogenesis of the small ribosomal subunit; interacts with U3 snoRNA, Mpp10p and Bfr2p; contains WD repeats, and has homology to Spb1p","termid":"PBO:0082774"}


id: GO:0070580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving base J (beta-D-glucosyl-hydroxymethyluracil), a hypermodified thymidine residue found in the genome of kinetoplastid parasites. This modified base is localized primarily to repetitive DNA, namely the telomeres, and is implicated in the regulation of antigenic variation. The base is synthesized in a two-step pathway. Initially, a thymidine residue in DNA is hydroxylated by a thymidine hydroxylase (TH) to form the intermediate hydroxymethyluracil, which is then glucosylated to form base J.","definition_xrefs":["PMID:19114062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"base J metabolic process","synonyms":[{"name":"base J metabolism","type":"exact"},{"name":"beta-D-glucosyl-HOMedU metabolic process","type":"exact"},{"name":"beta-D-glucosyl-hydroxymethyluracil metabolism","type":"exact"}],"termid":"GO:0070580"}


id: PBO:0075337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 2","termid":"PBO:0075337"}


id: FYPO:0002792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"output_of","term_name":"abnormal vacuole fusion during cellular hypotonic response","termid":"FYPO:0004483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during cellular hypotonic response","synonyms":[{"name":"fragmented vacuoles during cellular hypotonic response","type":"related"},{"name":"small vacuoles present in greater numbers during cellular hypotonic response","type":"exact"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during hypotonic stress","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002792"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: PBO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial development protein 1","termid":"PBO:0042895"}


id: FYPO:0002666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which peptide-serine-N-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"abolished peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"peptide-serine-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0002666"}


id: PBO:0038280
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first_approved_timestamp","termid":"PBO:0038280"}


id: PBO:0065798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing like","termid":"PBO:0065798"}


id: PBO:0058037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4258","termid":"PBO:0058037"}


id: PBO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC-8 DNA repair homolog","termid":"PBO:0003330"}


id: MOD:01317
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12216740","Unimod:178#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation to amine thiol","termid":"MOD:00535"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol - site T","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:01317"}


id: PBO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sulfide_level","termid":"PBO:0030285"}


id: PBO:0058389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4761","termid":"PBO:0058389"}


id: PBO:0051604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 27","termid":"PBO:0051604"}


id: PBO:0059228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 9","termid":"PBO:0059228"}


id: PBO:0076849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated actin remodelling kinase 1","termid":"PBO:0076849"}


id: GO:0032206
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance","type":"narrow"},{"name":"stimulation of telomere maintenance","type":"narrow"},{"name":"up regulation of telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance","type":"exact"}],"termid":"GO:0032206","terms_by_termid":{"GO:0032215":null}}


id: PBO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab Escort Protein","termid":"PBO:0003971"}


id: RO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is a transportation or localization process and the outcome of this process is to move c to a destination that is part of some s, where the start location of c is part of the region that surrounds s.","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imports","termid":"RO:0002340"}


id: GO:0048134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single gonial founder cell.","definition_xrefs":["PMID:10370240","PMID:21681920","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line cyst formation","synonyms":[{"name":"germline cyst formation","type":"exact"}],"termid":"GO:0048134"}


id: GO:1900110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 dimethylation (obsolete GO:1900110)","synonyms":[{"name":"down regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"down-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"downregulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"inhibition of histone H3 K9 dimethylation","type":"narrow"},{"name":"inhibition of histone H3-K9 dimethylation","type":"narrow"},{"name":"inhibition of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"negative regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"negative regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900110"}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: FYPO:0005338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to HU","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005338"}


id: GO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipoprotein metabolic process","synonyms":[{"name":"regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050746"}


id: GO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of a metal ion to a molecule via a nitrogen-metal bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}


id: GO:1904756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gut granule assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17535251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"regulation of gut granule assembly","termid":"GO:1904755"},{"relation_name":"negatively_regulates","term_name":"gut granule assembly","termid":"GO:1902900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gut granule assembly","synonyms":[{"name":"down regulation of gut granule assembly","type":"exact"},{"name":"down regulation of gut granule biogenesis","type":"exact"},{"name":"down regulation of gut granule formation","type":"exact"},{"name":"down-regulation of gut granule assembly","type":"exact"},{"name":"down-regulation of gut granule biogenesis","type":"exact"},{"name":"down-regulation of gut granule formation","type":"exact"},{"name":"downregulation of gut granule assembly","type":"exact"},{"name":"downregulation of gut granule biogenesis","type":"exact"},{"name":"downregulation of gut granule formation","type":"exact"},{"name":"inhibition of gut granule assembly","type":"narrow"},{"name":"inhibition of gut granule biogenesis","type":"narrow"},{"name":"inhibition of gut granule formation","type":"narrow"},{"name":"negative regulation of gut granule biogenesis","type":"exact"},{"name":"negative regulation of gut granule formation","type":"exact"}],"termid":"GO:1904756"}


id: PBO:0051102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-12 (pseudogene)","termid":"PBO:0051102"}


id: PR:P87311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND-type zinc finger protein C31F10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.10c","synonyms":[{"name":"Spom972h-SPBC31F10.10c","type":"exact"}],"termid":"PR:P87311"}


id: PBO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 1","termid":"PBO:0060513"}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: PBO:0081611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 536","termid":"PBO:0081611"}


id: GO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in the positive regulation of endothelial cell migration.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of endothelial cell migration (obsolete GO:0044328)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of endothelial cell migration","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of endothelial cell migration","type":"exact"}],"termid":"GO:0044328"}


id: FYPO:0003464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is lower than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased alpha,alpha-trehalase activity during cellular response to heat","synonyms":[{"name":"decreased neutral trehalase activity during cellular response to heat","type":"exact"},{"name":"decreased trehalase activity during cellular response to heat","type":"broad"},{"name":"reduced alpha,alpha-trehalase activity during cellular response to heat","type":"exact"}],"termid":"FYPO:0003464"}


id: PATO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis.","definition_xrefs":["PATOC:MSP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorso-ventrally flattened","termid":"PATO:0002053"}


id: PBO:0062999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 6","termid":"PBO:0062999"}


id: PBO:0064932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase 1","termid":"PBO:0064932"}


id: FYPO:0000802
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115416],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115194,115502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115491],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115627],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115595,115474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115417],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytoskeleton organization is abnormal.","definition_xrefs":["PomBase:mah","GO:0007010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild 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pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_04280","SJAG_02392","SJAG_04522","SJAG_01143"],"name":"abnormal cytoskeleton organization","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_03596","SJAG_02592","SJAG_04703","SJAG_02392","SJAG_01143","SJAG_04522"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta","rga4delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","for3delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cytoskeleton organisation","type":"exact"}],"termid":"FYPO:0000802","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by aortic body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in aortic body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during aortic body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003043"}


id: PBO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.14","termid":"PBO:0001748"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: PBO:0065891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB38, member RAS oncogene family","termid":"PBO:0065891"}


id: PBO:0082142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of G1-specific transcription factors MBF and SBF; involved in regulation of the timing of G1-specific gene transcription and cell cycle initiation; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; MSA1 has a paralog, MSA2, that arose from the whole genome duplication","termid":"PBO:0082142"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: GO:0033180
data:
  {"annotated_genes":["SJAG_01397","SJAG_01471","SJAG_04955","SJAG_00212","SJAG_01447","SJAG_04015","SJAG_01817","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84176,114766,98761,97730,96107,105948,92714,95009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.","definition_xrefs":["PMID:16449553","GOC:mah","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033180","terms_by_termid":{"GO:0000221":null}}


id: MOD:01271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:271#Y","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site Y","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01271"}


id: GO:1990452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex containing Parkin (PARK2), the F-box protein FBXW7 (also called SEL-10) and a cullin from the Cul1 subfamily; substrate specificity is conferred by the F-box protein.","definition_xrefs":["GOC:PARL","PMID:12628165","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Parkin-FBXW7-Cul1 ubiquitin ligase complex","synonyms":[{"name":"PRKN-FBXW7-Cul1 complex","type":"exact"},{"name":"Park2-FBXW7-Cul1 complex","type":"exact"},{"name":"Parkin-FBXW7-Cul1 protein complex","type":"exact"},{"name":"Parkin-HSel-10-Cullin-1 complex","type":"narrow"},{"name":"Parkin/Cul1/F-box protein complex","type":"exact"}],"termid":"GO:1990452"}


id: PBO:0074680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63B","termid":"PBO:0074680"}


id: GO:0000023
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97691,97690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose), an intermediate in the catabolism of glycogen and starch.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malt sugar metabolic process","type":"exact"},{"name":"malt sugar metabolism","type":"exact"},{"name":"maltose metabolism","type":"exact"}],"termid":"GO:0000023","terms_by_termid":{"GO:0000025":null}}


id: PBO:0057701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1289-1","termid":"PBO:0057701"}


id: PBO:0049901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 2","termid":"PBO:0049901"}


id: FYPO:0006133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytosphingosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phytosphingosine level","synonyms":[{"name":"increased cellular phytosphingosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytosphingosine level during vegetative growth","type":"exact"},{"name":"increased phytosphingosine accumulation","type":"related"}],"termid":"FYPO:0006133"}


id: GO:0072027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connecting tubule development","synonyms":[{"name":"connecting duct development","type":"exact"}],"termid":"GO:0072027"}


id: FYPO:0007186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea","synonyms":[{"name":"increased ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular ROS level during cellular response to hydroxyurea","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to HU","type":"exact"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007186"}


id: PBO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 28","termid":"PBO:0070920"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: GO:1900239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phenotypic switching","synonyms":[{"name":"regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900239"}


id: FYPO:0002168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on ethyl methanesulfonate","synonyms":[{"name":"normal cell population growth in presence of ethyl methanesulfonate","type":"exact"},{"name":"normal cell population growth on EMS","type":"exact"},{"name":"normal cell population growth on ethyl methanesulfonate","type":"exact"},{"name":"normal cellular response to ethyl methanesulfonate","type":"related"},{"name":"normal growth on ethyl methanesulphonate","type":"exact"},{"name":"normal vegetative cell population growth on ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002168"}


id: GO:0008203
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105929],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cholesterol metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cholesterol metabolism","type":"exact"}],"termid":"GO:0008203","terms_by_termid":{"GO:0045540":null}}


id: GO:0060348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of bone over time, from its formation to the mature structure. Bone is the hard skeletal connective tissue consisting of both mineral and cellular components.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone development","termid":"GO:0060348"}


id: PBO:0067879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 181","termid":"PBO:0067879"}


id: GO:0140007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that regulates the TORC1 signaling pathway in response to nutrients. The KICSTOR complex is composed of KPTN, ITFG2, C12orf66 and SZT2.","definition_xrefs":["PMID:28199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"KICSTOR complex","termid":"GO:0140007"}


id: FYPO:0002187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001985"],"is_obsolete":false,"name":"inviable normal volume spheroid vegetative cell","synonyms":[{"name":"inviable normal volume rounded vegetative cell","type":"exact"},{"name":"inviable normal volume spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002187"}


id: GO:0106080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GATOR1 complex.","definition_xrefs":["PMID:28199306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GATOR1 complex binding","termid":"GO:0106080"}


id: PBO:0084251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol 1,3,4,5,6-pentakisphosphate 2-kinase; nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable; human IPPK can complement ipk1 null mutant","termid":"PBO:0084251"}


id: PBO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITIH4 antisense RNA 1","termid":"PBO:0051933"}


id: GO:0007318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pole plasm protein localization","secondary_identifiers":["GO:0048115"],"synonyms":[{"name":"establishment and maintenance of pole plasm protein localization","type":"exact"},{"name":"oocyte pole plasm protein localization","type":"exact"},{"name":"pole plasm protein localisation","type":"exact"}],"termid":"GO:0007318"}


id: PBO:0090955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Meu34, human RNF13 family homolog, unknown biological role","termid":"PBO:0090955"}


id: PBO:0034343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_with","termid":"PBO:0034343"}


id: GO:0060462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung lobe from an initial condition to its mature state. This process begins with the formation of a lung lobe by branching morphogenesis and ends with the mature structure. A lung lobe is one of the rounded projections that compose the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe development","termid":"GO:0060462"}


id: PBO:0063520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphatase","termid":"PBO:0063520"}


id: PBO:0091866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA snR48","termid":"PBO:0091866"}


id: GO:0016020
data:
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id: GO:2000568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of memory T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of memory T cell activation","termid":"GO:2000567"},{"relation_name":"positively_regulates","term_name":"memory T cell activation","termid":"GO:0035709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of memory T cell activation","termid":"GO:2000568"}


id: GO:0034105
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tissue remodeling","synonyms":[{"name":"positive regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034105"}


id: PBO:0059134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 1","termid":"PBO:0059134"}


id: GO:0048584
data:
  {"annotated_genes":["SJAG_02424","SJAG_00823","SJAG_01978","SJAG_00561","SJAG_03907","SJAG_00424","SJAG_03695","SJAG_01837","SJAG_00318","SJAG_00781","SJAG_03936","SJAG_06592","SJAG_00329","SJAG_01150","SJAG_03568","SJAG_02231","SJAG_03371","SJAG_00143","SJAG_02486","SJAG_03453","SJAG_03903","SJAG_03828","SJAG_03345","SJAG_00209","SJAG_01787","SJAG_01587","SJAG_01181","SJAG_00610","SJAG_02183","SJAG_01585","SJAG_00027","SJAG_00082","SJAG_03089","SJAG_01805","SJAG_04551","SJAG_04776","SJAG_05184","SJAG_04910","SJAG_03048","SJAG_01199","SJAG_06622","SJAG_00457","SJAG_02605","SJAG_04259","SJAG_04496","SJAG_01632","SJAG_02945","SJAG_06621","SJAG_03405","SJAG_06588","SJAG_00845","SJAG_04666","SJAG_03160","SJAG_02135","SJAG_02682","SJAG_05030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98243,107056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[98939,85563,86884,88516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[85386,112466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[113334,108112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[103486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[109862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[105022,105020,107899,113428,108557,105018,114321,91362,105023,105019,105017,105021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[111647,99802,84284,86961,110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046579"},{"annotations":[83676,89912,106601,86124,98483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[113052,89787,109509,109510,109511,89785,89786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[102645,101207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[103228,90425,105343,92203,85546,84164,84454,94113,106618,114409,108937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[103071,87299,93851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to a stimulus. 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id: GO:0032981
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"mitochondrial respirasome assembly","termid":"GO:0097250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0007005","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I assembly","synonyms":[{"name":"mitochondrial NADH dehydrogenase complex (ubiquinone) assembly","type":"exact"},{"name":"mitochondrial complex I assembly","type":"exact"}],"termid":"GO:0032981"}


id: GO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fucose, the pentose 6-deoxygalactose.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fucose binding","termid":"GO:0042806"}


id: PBO:0043113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHURC1-FNTB readthrough","termid":"PBO:0043113"}


id: PBO:0086467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial inner membrane protein of unknown function; although similar to paralogous Sdh3p, Shh3p is not a stoichiometric subunit of either succinate dehydrogenase or of the TIM22 translocase; SHH3 has a paralog, SDH3, that arose from the whole genome duplication","termid":"PBO:0086467"}


id: PR:O14256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G10.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.10c","synonyms":[{"name":"Spom972h-SPAC6G10.10c","type":"exact"}],"termid":"PR:O14256"}


id: GO:0032055
data:
  {"annotated_genes":["SJAG_02592","SJAG_00690","SJAG_03869","SJAG_01942","SJAG_00786","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111675,88911,90473,95430,88612,105753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"downregulation of translation in response to stress","type":"exact"},{"name":"down regulation of translation in response to stress","type":"exact"},{"name":"down-regulation of translation in response to stress","type":"exact"},{"name":"inhibition of translation in response to stress","type":"narrow"}],"termid":"GO:0032055","terms_by_termid":{"GO:1990625":null}}


id: GO:0003257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of a myocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation (obsolete GO:0003257)","termid":"GO:0003257"}


id: PBO:0050173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 29","termid":"PBO:0050173"}


id: CHEBI:75142
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal","termid":"CHEBI:75142"}


id: GO:1990846
data:
  {"annotated_genes":["SJAG_02874","SJAG_01348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91596,93187],"is_not":false,"summary":null,"term":"GO:1990846"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonucleoside-diphosphate reductase.","definition_xrefs":["PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01348":null,"SJAG_02874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990846","terms_by_termid":{"GO:1990846":null}}


id: PR:Q9USW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.10","synonyms":[{"name":"Spom972h-rps402","type":"exact"}],"termid":"PR:Q9USW5"}


id: PBO:0040182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly factor for spindle microtubules","termid":"PBO:0040182"}


id: GO:0030256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three secretory proteins that carry out secretion in the type I secretion system: an inner membrane transport ATPase (termed ABC protein for ATP-binding cassette), which provides the energy for protein secretion; an outer membrane protein, which is exported via the sec pathway; and a membrane fusion protein, which is anchored in the inner membrane and spans the periplasmic space.","definition_xrefs":["PMID:9618447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type I protein secretion system complex","synonyms":[{"name":"ABC translocator complex","type":"broad"}],"termid":"GO:0030256"}


id: GO:0002895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of central B cell tolerance induction","termid":"GO:0002895"}


id: GO:0031357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast inner membrane (obsolete GO:0031357)","synonyms":[{"name":"integral to chloroplast inner membrane","type":"narrow"}],"termid":"GO:0031357"}


id: PBO:0045470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 2","termid":"PBO:0045470"}


id: GO:0032798
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103741,106370],"is_not":false,"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A conserved DNA recombinase mediator complex that contains two Swi5 monomers and one Sfr1 monomer in Schizosaccharomyces, or orthologs thereof (e.g. Sae3p and Mei5p in Saccharomyces).","definition_xrefs":["PMID:15620352","PMID:16921379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase mediator complex","termid":"GO:0033061"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Swi5-Sfr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Sae3-Mei5 complex","type":"exact"},{"name":"Swi5 complex","type":"broad"}],"termid":"GO:0032798","terms_by_termid":{"GO:0032798":null}}


id: PBO:0075647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY4 intronic transcript 1","termid":"PBO:0075647"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0025500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-K ortholog Sim4","termid":"PBO:0025500"}


id: RO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is the ribosomal translation of y if and only if a ribosome reads x through a series of triplet codon-amino acid adaptor activities (GO:0030533) and produces y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal_translation_of","termid":"RO:0002512"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["PubMed:9252331","Unimod:465"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: GO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate = 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"dichloromuconate cycloisomerase activity","secondary_identifiers":["MetaCyc:RXN-9856","RHEA:17437","UM-BBD_reactionID:r0277"],"synonyms":[{"name":"2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"}],"termid":"GO:0018852"}


id: GO:0008300
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"},{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isoprenoid catabolic process","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["GO:0016097"],"synonyms":[{"name":"isoprenoid breakdown","type":"exact"},{"name":"isoprenoid catabolism","type":"exact"},{"name":"isoprenoid degradation","type":"exact"},{"name":"polyisoprenoid breakdown","type":"narrow"},{"name":"polyisoprenoid catabolic process","type":"narrow"},{"name":"polyisoprenoid catabolism","type":"narrow"},{"name":"polyisoprenoid degradation","type":"narrow"},{"name":"polyterpene catabolic process","type":"narrow"},{"name":"polyterpene catabolism","type":"narrow"}],"termid":"GO:0008300","terms_by_termid":{"GO:0016095":null}}


id: GO:0008761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine.","definition_xrefs":["EC:5.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 2-epimerase activity","secondary_identifiers":["RHEA:17213","MetaCyc:UDPGLCNACEPIM-RXN","Reactome:R-HSA-4085021","Reactome:R-HSA-4088338"],"synonyms":[{"name":"UDP-GlcNAc-2-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"UDP-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphate-N-acetylglucosamine-2'-epimerase activity","type":"related"},{"name":"uridine diphospho-N-acetylglucosamine 2'-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine 2'-epimerase activity","type":"related"}],"termid":"GO:0008761"}


id: GO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box H + ACA snoRNP protein (obsolete GO:0005735)","synonyms":[{"name":"box H + ACA snoRNP protein","type":"exact"}],"termid":"GO:0005735"}


id: PBO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic oncogenic antisense to MET transcript","termid":"PBO:0043607"}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: GO:0120219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a polarized cell that is just below the apical region. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue so the subapical region is further from the exposed surface and closer to the basal lamina.","definition_xrefs":["PMID:29891944","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"subapical part of cell","synonyms":[{"name":"subapical region of cell","type":"exact"}],"termid":"GO:0120219"}


id: PBO:0077424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM161B divergent transcript","termid":"PBO:0077424"}


id: GO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Binding of a diffusible ligand to a T cell receptor as part of a signaling process.","definition_xrefs":["GOC:jid","GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand binding to T cell receptor (obsolete GO:0023007)","synonyms":[{"name":"ligand binding to T cell receptor","type":"exact"}],"termid":"GO:0023007"}


id: GO:0030648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic biosynthetic process","synonyms":[{"name":"aminoglycoside antibiotic anabolism","type":"exact"},{"name":"aminoglycoside antibiotic biosynthesis","type":"exact"},{"name":"aminoglycoside antibiotic formation","type":"exact"},{"name":"aminoglycoside antibiotic synthesis","type":"exact"}],"termid":"GO:0030648"}


id: GO:1901210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac chamber formation","synonyms":[{"name":"regulation of heart chamber formation","type":"exact"}],"termid":"GO:1901210"}


id: GO:1902133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-secoisolariciresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:15949826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-secoisolariciresinol metabolic process","synonyms":[{"name":"(+)-secoisolariciresinol metabolism","type":"exact"}],"termid":"GO:1902133"}


id: PBO:0042255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 2","termid":"PBO:0042255"}


id: PBO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in respiratory chain complex IV assembly Coa1 (predicted)","termid":"PBO:0003821"}


id: PBO:0005839
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.99.8","termid":"PBO:0005839"}


id: PATO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001326 left-right symmetry (obsolete PATO:0001326)","termid":"PATO:0001326"}


id: PBO:0059100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 6","termid":"PBO:0059100"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: GO:0061640
data:
  {"annotated_genes":["SJAG_03088","SJAG_02831","SJAG_00514","SJAG_02864","SJAG_03915","SJAG_01453","SJAG_03342","SJAG_04887","SJAG_03374","SJAG_04666","SJAG_04468","SJAG_02592","SJAG_01277","SJAG_01732","SJAG_05290","SJAG_01894","SJAG_01787","SJAG_03309","SJAG_01805","SJAG_03264","SJAG_05285","SJAG_01665","SJAG_05179","SJAG_03025","SJAG_00938","SJAG_04358","SJAG_04621","SJAG_03596","SJAG_00228","SJAG_04781","SJAG_02657","SJAG_02916","SJAG_02838","SJAG_01889","SJAG_04470","SJAG_03045","SJAG_01143","SJAG_02380","SJAG_03887","SJAG_00256","SJAG_04077","SJAG_02431","SJAG_03564","SJAG_03379","SJAG_04001","SJAG_00807","SJAG_04690","SJAG_03048","SJAG_00082","SJAG_03936","SJAG_00279","SJAG_01188","SJAG_00845","SJAG_02807","SJAG_01863","SJAG_04412","SJAG_01837","SJAG_01769","SJAG_03581","SJAG_00663","SJAG_02215","SJAG_04930","SJAG_02222","SJAG_04776","SJAG_00442","SJAG_04551","SJAG_03688","SJAG_04375","SJAG_04498","SJAG_04703","SJAG_03011","SJAG_00268","SJAG_04982","SJAG_00700","SJAG_01215","SJAG_01114","SJAG_03692","SJAG_02700","SJAG_03704","SJAG_03123","SJAG_04597","SJAG_02392","SJAG_01456","SJAG_03631","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90609,102085,112037],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[106877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[94135,85453,94390,104215],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[101222,106878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[87398,95860],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[115475,93828,113927,88424,98520,91392,113099,107946,94027,114683,94136,84400,88637,88683,108382,114506,97359,93752,98658,94995],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[94137],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[94996,113928,108383,93753,96797,97030,84401,94138,98521,91393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[113929,97058,95384,87399,102276,94003,96211,94393,99357,91394,93754,108384,108843,94028,104217,100018,112253,78694,115013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000281"},{"annotations":[104930,106842,115610,92424,84415],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[103122,104691,100743,102195,98735,102179,109158,95385,97031],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[98465],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99798],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98241,98466],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[98470],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[86120,90517],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[109436,83674,106600,90686,90518],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[86121,89907],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903490"},{"annotations":[86885,91957,106844,99801,115611],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[85364,88517,111531,113940,103124,85996,101255,109437,89908,102455],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[88518,90521,83675],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[110452,102180],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[114684,88425,106879],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[89914,90483,115504],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[99590,86126,83677,85942,109439,111532,105289,87943,112753,113574,114734],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[107451,97481,83997],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[113941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111886],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule cytoskeleton.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00256":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00442":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00700":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01277":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_02215":null,"SJAG_02222":null,"SJAG_02380":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02657":null,"SJAG_02700":null,"SJAG_02807":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02916":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03123":null,"SJAG_03264":null,"SJAG_03309":null,"SJAG_03342":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03631":null,"SJAG_03688":null,"SJAG_03692":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_03915":null,"SJAG_03936":null,"SJAG_04001":null,"SJAG_04077":null,"SJAG_04358":null,"SJAG_04375":null,"SJAG_04412":null,"SJAG_04468":null,"SJAG_04470":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null,"SJAG_05179":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cytoskeleton-dependent cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0061640","terms_by_termid":{"GO:0000281":null,"GO:0000915":null,"GO:0031671":null,"GO:0044837":null,"GO:0061640":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140279":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902412":null,"GO:1902413":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903490":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904498":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null}}


id: FYECO:0000437
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the auxin analogue 5-adamantyl-IAA was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 5IAA","secondary_identifiers":["PMID:37783794"],"synonyms":[{"name":"5-adamantyl-IAA","type":"exact"}],"termid":"FYECO:0000437"}


id: GO:0032215
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93296],"is_not":false,"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"stimulation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"up regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"up-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"upregulation of telomere maintenance via semi-conservative replication","type":"exact"}],"termid":"GO:0032215","terms_by_termid":{"GO:0032215":null}}


id: PBO:0056688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 9","termid":"PBO:0056688"}


id: PBO:0005215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp31","termid":"PBO:0005215"}


id: PBO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTRES1 pseudogene 1","termid":"PBO:0060146"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial E3 ubiquitin protein ligase 1","termid":"PBO:0060205"}


id: PBO:0029298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-methyl-L-ergothioneine_level_during_G0","termid":"PBO:0029298"}


id: GO:0141009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retrotransposon silencing mechanism in which mRNAs transcribed from transposons are targeted for degradation by a Piwi-associated RNA (piRNA).","definition_xrefs":["PMID:22121019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0140991"},{"relation_name":"is_a","term_name":"retrotransposon silencing by mRNA destabilization","termid":"GO:0141008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"piRNA-mediated retrotransposon silencing by mRNA destabilization","synonyms":[{"name":"piRNA-mediated post-transcriptional retrotransposon silencing","type":"exact"}],"termid":"GO:0141009"}


id: GO:0005951
data:
  {"annotated_genes":["SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102583,107150],"is_not":false,"summary":null,"term":"GO:0005951"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.","definition_xrefs":["PMID:8626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine-specific carbamoyl phosphate synthetase complex","type":"narrow"},{"name":"carbamoyl phosphate synthase complex","type":"exact"},{"name":"carbamoyl-phosphate synthase arginine-specific complex","type":"narrow"}],"termid":"GO:0005951","terms_by_termid":{"GO:0005951":null}}


id: PBO:0070407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 1","termid":"PBO:0070407"}


id: GO:0071241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to inorganic substance (obsolete GO:0071241)","termid":"GO:0071241"}


id: PBO:0053046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4B divergent transcript","termid":"PBO:0053046"}


id: GO:0008679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NADP+ = 2-hydroxy-3-oxopropanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-3-oxopropionate reductase activity","secondary_identifiers":["MetaCyc:TSA-REDUCT-RXN"],"synonyms":[{"name":"(R)-glycerate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"tartronate semialdehyde reductase (NADPH) activity","type":"related"}],"termid":"GO:0008679"}


id: PBO:0091422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase","termid":"PBO:0091422"}


id: PBO:0049431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 8","termid":"PBO:0049431"}


id: PBO:0065598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 14","termid":"PBO:0065598"}


id: GO:0140896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a double-stranded DNA or RNA from another organism to cytosolic cyclic GMP-AMP (cGAMP) synthase (cGAS) that activates innate immune responses through production of the second messenger cGAMP, which activates the adaptor STING.","definition_xrefs":["PMID:27648547","PMID:34261127","PMID:34261128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cGAS/STING signaling pathway","termid":"GO:0140896"}


id: PBO:0042162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 23","termid":"PBO:0042162"}


id: PBO:0063445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 7A","termid":"PBO:0063445"}


id: PBO:0073679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRT1 antisense RNA","termid":"PBO:0073679"}


id: GO:0052865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate anabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthesis","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate biosynthetic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate formation","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate synthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate anabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate formation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:0052865"}


id: GO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a guanine in t position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble guanine modification","termid":"GO:0002099"}


id: GO:1904163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22541436","GOC:rph","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of triglyceride homeostasis (obsolete GO:1904163)","synonyms":[{"name":"regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904163"}


id: PBO:0000734
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.48","termid":"PBO:0000734"}


id: GO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Downregulation of MAP kinase activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK (pseudohyphal growth) (obsolete GO:0000194)","synonyms":[{"name":"inactivation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000194"}


id: PBO:0005852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated protein Pal1","termid":"PBO:0005852"}


id: PBO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFC related checkpoint protein Rad17","termid":"PBO:0002903"}


id: PBO:0082034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory particle lid subcomplex component; role in Ub-dependent proteolysis and proteasome stability; involved in TREX-2 mediated mRNA export, and in the prevention of transcription-associated genome instability; ubiquitinated by Nedd4-like E3-ligase, Rsp5p; human ortholog DSS1, a BRCA1 binding protein implicated in cancer, complements the yeast null; drives trinucleotide repeat expansion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082034"}


id: PR:O59715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid delta(4)-desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.07c","synonyms":[{"name":"Spom972h-dsd1","type":"exact"},{"name":"delta 4-(E)-sphingolipid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dihydroceramide desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59715"}


id: GO:0035366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"negatively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of thymine transport","synonyms":[{"name":"negative regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035366"}


id: GO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotome development","termid":"GO:0061190"}


id: PATO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the front and the middle of an organism.","definition_xrefs":["PATOC:JI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteromedially rotated","termid":"PATO:0002399"}


id: PBO:0082831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved ribosomal protein P0 of the ribosomal stalk; involved in interaction between translational elongation factors and the ribosome; phosphorylated on serine 302; homologous to mammalian ribosomal protein LP0 and bacterial L10","termid":"PBO:0082831"}


id: PBO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-39","termid":"PBO:0075028"}


id: GO:0008360
data:
  {"annotated_genes":["SJAG_03581","SJAG_04509","SJAG_00028","SJAG_03486","SJAG_02838","SJAG_00236","SJAG_03705","SJAG_00333","SJAG_00610","SJAG_02022","SJAG_04666","SJAG_00596","SJAG_00216","SJAG_01456","SJAG_04724","SJAG_04322","SJAG_00845","SJAG_02536","SJAG_01799","SJAG_00661","SJAG_04461","SJAG_04522","SJAG_03637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115427,115428],"is_not":false,"summary":null,"term":"GO:0008360"},{"annotations":[102928,84196,99587,106839,113950,95834,112553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[100616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061246"},{"annotations":[103695,112659],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[96271,89844,99800,101433],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[100620,109131,101436,96274,114827,90689,91769,87244],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[98942,84041,88524],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the surface configuration of a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01456":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell shape","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"secondary_identifiers":["GO:0045788","GO:0045789"],"termid":"GO:0008360","terms_by_termid":{"GO:0008360":null,"GO:0051523":null,"GO:0061246":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0085280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal membrane E3 ubiquitin ligase; required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders","termid":"PBO:0085280"}


id: PBO:0036143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0036143"}


id: GO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 4 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 acetylation (obsolete GO:0043973)","synonyms":[{"name":"histone H3 acetylation at K4","type":"exact"},{"name":"histone H3K4 acetylation","type":"exact"}],"termid":"GO:0043973"}


