# terms

id: PBO:0087264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine-rich protein involved in PKC1 signaling pathway; protein kinase C (PKC1) signaling pathway controls cell integrity; overproduction suppresses pkc1 mutations","termid":"PBO:0087264"}


id: PBO:0076241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi domain containing 2 pseudogene 2","termid":"PBO:0076241"}


id: PBO:0091665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0091665"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PATO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000605 placement value (obsolete PATO:0000605)","synonyms":[{"name":"location","type":"related"},{"name":"position","type":"related"}],"termid":"PATO:0000605"}


id: PBO:0054574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1976","termid":"PBO:0054574"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: PBO:0044401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 63, pseudogene","termid":"PBO:0044401"}


id: GO:0036171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a chemical stimulus.","definition_xrefs":["PMID:17554048","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}


id: GO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to xenobiotic stimulus","secondary_identifiers":["GO:0035690"],"synonyms":[{"name":"cellular response to drug","type":"related"}],"termid":"GO:0071466"}


id: GO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process modulates the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of turgor in appressorium (obsolete GO:0075040)","synonyms":[{"name":"regulation of turgor formation in appressorium","type":"related"}],"termid":"GO:0075040"}


id: PBO:0039400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 5","termid":"PBO:0039400"}


id: GO:1904583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["PMID:20805360","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to polyamine macromolecule","synonyms":[{"name":"response to polyamines","type":"exact"},{"name":"response to polyamine","type":"exact"}],"termid":"GO:1904583"}


id: PBO:0073581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2B","termid":"PBO:0073581"}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: PBO:0062328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 66 pseudogene","termid":"PBO:0062328"}


id: GO:1902937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of inward rectifier potassium channel activity.","definition_xrefs":["GOC:bhm","GO_REF:0000088","GOC:TermGenie","PMID:16834334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"inward rectifier potassium channel complex","termid":"GO:1902937"}


id: PBO:0061093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 2","termid":"PBO:0061093"}


id: GO:0102075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC4-3-hydroxyacyl-CoA = OPC4-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC4-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102075)","termid":"GO:0102075"}


id: FYPO:0007829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division begins earlier than normal.","definition_xrefs":["PMID:34133210","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to cell division site","synonyms":[{"name":"advanced protein localization to cell division site","type":"exact"},{"name":"precocious protein localization to cell division site","type":"exact"},{"name":"premature protein localisation to cell division site","type":"exact"},{"name":"premature protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"premature protein localization to cell division site during vegetative growth","type":"exact"},{"name":"premature protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0007829"}


id: PBO:0043861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cramped chromatin regulator homolog 1","termid":"PBO:0043861"}


id: PBO:0040711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL3 transcription coactivator","termid":"PBO:0040711"}


id: PBO:0084278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein, member of the p24 family; forms complex with Erp3p, Erp5p, and Emp24p; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription","termid":"PBO:0084278"}


id: PBO:0052964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 cell adhesion molecule","termid":"PBO:0052964"}


id: PBO:0075285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 25 pseudogene 1","termid":"PBO:0075285"}


id: PBO:0026805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026805"}


id: PBO:0064209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, urokinase receptor","termid":"PBO:0064209"}


id: GO:0102822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + S-adenosyl-L-methionine = H+ + isorhamnetin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.42","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"quercetin 3'-O-methyltransferase activity","secondary_identifiers":["RHEA:55332","MetaCyc:RXN-8262"],"termid":"GO:0102822"}


id: PBO:0088188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger protein involved in control of meiosis; prevents meiosis by repressing IME1 expression and promotes mitosis by activating CLN2 expression; directly repressed by a1-alpha2 regulator; mediates cell type control of sporulation; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0088188"}


id: GO:0021660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 3. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:curators","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 3 morphogenesis","termid":"GO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 3 formation","termid":"GO:0021660"}


id: PBO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Zip1","termid":"PBO:0002456"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02403","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: GO:0071918
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103159],"is_not":false,"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The process in which urea, the water-soluble compound H2N-CO-NH2, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transport","termid":"GO:0015840"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"urea transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"urea membrane transport","type":"exact"}],"termid":"GO:0071918","terms_by_termid":{"GO:0071918":null}}


id: PBO:0086924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyrimidine nucleotidase; responsible for production of nicotinamide riboside and nicotinic acid riboside; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives; SDT1 has a paralog, PHM8, that arose from the whole genome duplication","termid":"PBO:0086924"}


id: GO:0018403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.","definition_xrefs":["RESID:AA0209","PMID:7338506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","synonyms":[{"name":"protein-dermatan sulphate linkage via dermatan 4-sulphate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine","type":"exact"}],"termid":"GO:0018403"}


id: PBO:0046432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxide hydrolase 2","termid":"PBO:0046432"}


id: PBO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein Cdb4, peptidase family","termid":"PBO:0001057"}


id: GO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-dibromo-4-hydroxybenzonitrile + 2 H2O = 3,5-dibromo-4-hydroxybenzoate + NH4. Involved in the bacterial degradation of the herbicide bromoxynil.","definition_xrefs":["RHEA:22100","EC:3.5.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"bromoxynil nitrilase activity","secondary_identifiers":["KEGG_REACTION:R04349","MetaCyc:3.5.5.6-RXN","UM-BBD_enzymeID:e0357"],"synonyms":[{"name":"3,5-dibromo-4-hydroxybenzonitrile aminohydrolase activity","type":"exact"},{"name":"bromoxynil-specific nitrilase activity","type":"exact"}],"termid":"GO:0018761"}


id: PBO:0030689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_M-factor","termid":"PBO:0030689"}


id: GO:0033483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of an internal steady state of a gas within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete gas homeostasis (obsolete GO:0033483)","termid":"GO:0033483"}


id: PBO:0108567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0108567"}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: PBO:0088859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1","termid":"PBO:0088859"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: GO:0072246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular parietal epithelial cell over time, from its formation to the mature structure. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell development","termid":"GO:0072016"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"},{"relation_name":"part_of","term_name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell development","synonyms":[{"name":"metanephric Bowman's capsule development","type":"exact"}],"termid":"GO:0072246"}


id: GO:0008318
data:
  {"annotated_genes":["SJAG_03810","SJAG_04923","SJAG_04434","SJAG_03029","SJAG_02583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97492,91826,91827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[97493,97494,86667,86668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[97495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004661"},{"annotations":[85655,97496,111021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765","GO:0140096"],"is_obsolete":false,"name":"protein prenyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008244"],"termid":"GO:0008318","terms_by_termid":{"GO:0004660":null,"GO:0004661":null,"GO:0004662":null,"GO:0004663":null}}


id: GO:1902118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcidiol.","definition_xrefs":["GOC:bf","PMID:11799400","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D3 vitamins binding","termid":"GO:1902271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"calcidiol binding","synonyms":[{"name":"25(OH)D3 binding","type":"exact"},{"name":"25-hydroxycholecalciferol binding","type":"exact"},{"name":"25-hydroxyvitamin D3 binding","type":"exact"},{"name":"25OHD3 binding","type":"exact"},{"name":"calcifediol binding","type":"exact"}],"termid":"GO:1902118"}


id: PBO:0072624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 10 homolog B2","termid":"PBO:0072624"}


id: PATO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001117 absolute impulse value (obsolete PATO:0001117)","termid":"PATO:0001117"}


id: PBO:0078155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 33 (pseudogene)","termid":"PBO:0078155"}


id: GO:1905903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesoderm formation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph","GOC:BHF_miRNA","PMID:23939491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesoderm formation","termid":"GO:1905902"},{"relation_name":"is_a","term_name":"negative regulation of mesoderm development","termid":"GO:2000381"},{"relation_name":"negatively_regulates","term_name":"mesoderm formation","termid":"GO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesoderm formation","synonyms":[{"name":"down regulation of mesoderm formation","type":"exact"},{"name":"down-regulation of mesoderm formation","type":"exact"},{"name":"downregulation of mesoderm formation","type":"exact"},{"name":"inhibition of mesoderm formation","type":"narrow"}],"termid":"GO:1905903"}


id: GO:0170022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific bitter compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:21262465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0022857","GO:0038023","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ionotropic bitter taste receptor activity","termid":"GO:0170022"}


id: GO:1990140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex that catalyses sulfur transfer from the sulfur carrier subunit of molybdopterin synthase to precursor Z to synthesize molybdopterin as part of molybdopterin cofactor (Moco) biosynthesis. In E. coli the subunits are MoaE and MoaD; in human, MOCS2B and MOCS2A. Moco biosynthesis and its constituent molecules are evolutionarily conserved.","definition_xrefs":["PMID:16669776","PMID:11135669","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"molybdopterin synthase complex","synonyms":[{"name":"MPT synthase complex","type":"exact"},{"name":"molybdopterin cofactor (Moco) biosynthesis sulfurtransferase complex","type":"related"},{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:1990140"}


id: GO:0046295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate metabolic process","termid":"GO:0009441"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolate biosynthetic process","synonyms":[{"name":"glycolate anabolism","type":"exact"},{"name":"glycolate biosynthesis","type":"exact"},{"name":"glycolate formation","type":"exact"},{"name":"glycolate synthesis","type":"exact"}],"termid":"GO:0046295"}


id: PBO:0048116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 4","termid":"PBO:0048116"}


id: PBO:0109221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 2","termid":"PBO:0109221"}


id: PBO:0080809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 5","termid":"PBO:0080809"}


id: GO:0006313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of transposition in which a transposable element (transposon) is moved to another part of a genome, either by a cut-and-paste mechanism or a replicative mechanism.","definition_xrefs":["PMID:26846462","ISBN:1555812090","PMID:32588192","PMID:30416149","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"transposition","termid":"GO:0032196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"DNA transposition","secondary_identifiers":["GO:0006318","Wikipedia:Transposable_element","Wikipedia:Transposase","GO:0006317"],"synonyms":[{"name":"Class II transposition","type":"exact"},{"name":"transposition, DNA-mediated","type":"exact"}],"termid":"GO:0006313"}


id: PBO:0068545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 151, pseudogene","termid":"PBO:0068545"}


id: FYPO:0006716
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which chromosomes segregate equally (i.e. normally), but the nuclear envelope is not distributed equally between daughter nuclei. As a result, the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:vw","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002403","FYPO:0001320"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal nuclear envelope distribution","synonyms":[{"name":"large and small daughter nuclei, with unequal nuclear envelope and equal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal nuclear envelope distribution, during vegetative growth","type":"exact"},{"name":"large and small daughter nuclei, with unequal nuclear envelope partitioning","type":"exact"}],"termid":"FYPO:0006716"}


id: PBO:0068279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNASEH1 divergent transcript","termid":"PBO:0068279"}


id: GO:0140708
data:
  {"annotated_genes":["SJAG_01074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110479],"is_not":false,"summary":null,"term":"GO:0140708"}]},"cv_name":"biological_process","definition":"The C-terminal elongation of 60S-anchored stalled nascent polypeptide chains with untemplated alanine and threonine tails (CAT tails). CAT tails participate in the recognition of stalled nascent chains by the ribosome quality control system.","definition_xrefs":["PMID:32934225","PMID:25554787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"},{"relation_name":"part_of","term_name":"rescue of stalled ribosome","termid":"GO:0072344"},{"relation_name":"part_of","term_name":"ribosome-associated ubiquitin-dependent protein catabolic process","termid":"GO:1990116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0010467","GO:0002181","GO:0030163","GO:0008150"],"is_obsolete":false,"name":"CAT tailing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140708","terms_by_termid":{"GO:0140708":null}}


id: PBO:0078167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta constant 2","termid":"PBO:0078167"}


id: PBO:0053752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 992","termid":"PBO:0053752"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: PBO:0082933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic assembly chaperone for ribosomal protein Rps2p; co-translationally associates with the N-terminal extension of Rps2p to facilitate expression, solubility and ribosome assembly; released prior to the nuclear import of Rps2p; required for correct processing of 20S pre-rRNA at site D to generate mature 18S rRNA; essential gene in the S288C background but not in CEN.PK2; homologous to human PDCD2L and PDCD2","termid":"PBO:0082933"}


id: GO:0097108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the hedgehog protein family, signaling proteins involved in development.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:10050855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"hedgehog family protein binding","termid":"GO:0097108"}


id: GO:0032082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of type III restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032073"},{"relation_name":"is_a","term_name":"regulation of type III site-specific deoxyribonuclease activity","termid":"GO:0032086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III site-specific deoxyribonuclease activity","synonyms":[{"name":"down regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type III restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type III restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type III restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type III restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032082"}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: GO:0019987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of anti-apoptosis (obsolete GO:0019987)","synonyms":[{"name":"down regulation of anti-apoptosis","type":"exact"},{"name":"down-regulation of anti-apoptosis","type":"exact"},{"name":"downregulation of anti-apoptosis","type":"exact"},{"name":"inhibition of anti-apoptosis","type":"narrow"},{"name":"negative regulation of anti-apoptosis","type":"exact"}],"termid":"GO:0019987"}


id: GO:0047108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (R)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["RHEA:24352","EC:1.1.1.279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04105","MetaCyc:1.2.1.55-RXN"],"synonyms":[{"name":"(R)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (R)-reductase activity","type":"related"},{"name":"ethyl-(R)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047108"}


id: GO:0050436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microfibril, any small fibril occurring in biological material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix binding","termid":"GO:0050840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"microfibril binding","termid":"GO:0050436"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: PBO:0027803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_JM216","termid":"PBO:0027803"}


id: GO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides the spatial regions of an embryo into serially repeated regions.","definition_xrefs":["GOC:dph","GOC:ma","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"periodic partitioning","termid":"GO:0007365"}


id: PBO:0067642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 815, pseudogene","termid":"PBO:0067642"}


id: PBO:0045557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 1","termid":"PBO:0045557"}


id: SO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K4_methylation_site","termid":"SO:0001734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_dimethylation_site","synonyms":[{"name":"H3K4 di-methylation site","type":"exact"},{"name":"H3K4Me2","type":"related"}],"termid":"SO:0001725"}


id: PBO:0056495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3","termid":"PBO:0056495"}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: PBO:0051801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 3","termid":"PBO:0051801"}


id: PBO:0002812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I upstream activation factor complex subunit Rrn10","termid":"PBO:0002812"}


id: PBO:0088220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLLLP motif protein","termid":"PBO:0088220"}


id: GO:0010525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transposition, RNA-mediated (obsolete GO:0010525)","termid":"GO:0010525"}


id: PBO:0066699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog B","termid":"PBO:0066699"}


id: PBO:0069020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 264, pseudogene","termid":"PBO:0069020"}


id: PBO:0070443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 like","termid":"PBO:0070443"}


id: PBO:0067412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 523, pseudogene","termid":"PBO:0067412"}


id: PBO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 4","termid":"PBO:0061152"}


id: GO:0031104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of dendrites in response to their loss or damage.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite regeneration","termid":"GO:0031104"}


id: PBO:0044208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 8","termid":"PBO:0044208"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: PBO:0067665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 843, pseudogene","termid":"PBO:0067665"}


id: GO:0021785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","PMID:14699587","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance","synonyms":[{"name":"BMN axon guidance","type":"exact"},{"name":"branchial motor axon guidance","type":"exact"},{"name":"special visceral motor neuron axon guidance","type":"exact"}],"termid":"GO:0021785"}


id: PBO:0063929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide kinase, FYVE-type zinc finger containing","termid":"PBO:0063929"}


id: GO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-3S iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide. The three-iron three-sulfur cluster probably does not exist except as an intermediate form.","definition_xrefs":["RESID:AA0138"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide (obsolete GO:0018286)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron trisulphide","type":"exact"}],"termid":"GO:0018286"}


id: GO:0018630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxytoluene + NADH + O2 = NAD+ + OH- + 3-hydroxybenzyl alcohol.","definition_xrefs":["UM-BBD_reactionID:r0081"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-xylenol methylhydroxylase activity (obsolete GO:0018630)","termid":"GO:0018630"}


id: SO:0001235
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region containing at least one unique origin of replication and a unique termination site.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replicon","secondary_identifiers":["http://en.wikipedia.org/wiki/Replicon_(genetics)"],"termid":"SO:0001235"}


id: PR:O94312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp2 gene.","definition_xrefs":["UniProtKB:O94312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.07c","synonyms":[{"name":"Spom972h-pdp2","type":"exact"}],"termid":"PR:O94312"}


id: PBO:0071052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 54","termid":"PBO:0071052"}


id: GO:1902087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S,S-dimethyl-beta-propiothetin.","definition_xrefs":["GOC:TermGenie","GOC:jh2","PMID:19807777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dimethylsulfoniopropionate catabolic process","synonyms":[{"name":"S,S-dimethyl-beta-propiothetin breakdown","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin catabolic process","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin catabolism","type":"exact"},{"name":"S,S-dimethyl-beta-propiothetin degradation","type":"exact"}],"termid":"GO:1902087"}


id: GO:0006522
data:
  {"annotated_genes":["SJAG_02496","SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046436"},{"annotations":[107308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02496":null,"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"alanine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alanine metabolism","type":"exact"}],"termid":"GO:0006522","terms_by_termid":{"GO:0042853":null,"GO:0046436":null}}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: PATO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The temporal relation between the start of the process with respect to a reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onset quality","termid":"PATO:0002325"}


id: GO:0004400
data:
  {"annotated_genes":["SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98403],"is_not":false,"summary":null,"term":"GO:0004400"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate.","definition_xrefs":["EC:2.6.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histidinol-phosphate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HISTAMINOTRANS-RXN","RHEA:23744"],"synonyms":[{"name":"IAP transaminase activity","type":"related"},{"name":"L-histidinol phosphate aminotransferase activity","type":"related"},{"name":"L-histidinol-phosphate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamic-imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidine:imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidinol phosphate aminotransferase activity","type":"related"},{"name":"histidinol-phosphate aminotransferase activity","type":"exact"},{"name":"imidazole acetol-phosphate transaminase activity","type":"related"},{"name":"imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"imidazolylacetolphosphate aminotransferase activity","type":"related"},{"name":"imidazolylacetolphosphate transaminase activity","type":"related"}],"termid":"GO:0004400","terms_by_termid":{"GO:0004400":null}}


id: PBO:0030008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level","termid":"PBO:0030008"}


id: PBO:0074893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 68","termid":"PBO:0074893"}


id: GO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.","definition_xrefs":["PMID:20485493","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell differentiation","termid":"GO:0090392"}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: GO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.2-RXN","RHEA:18945","KEGG_REACTION:R03219","Reactome:R-HSA-1650808"],"synonyms":[{"name":"collagen proline hydroxylase activity","type":"related"},{"name":"hydroxylase, collagen proline activity","type":"related"},{"name":"peptidyl proline hydroxylase activity","type":"broad"},{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate-4-dioxygenase activity","type":"exact"},{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline protocollagen hydroxylase activity","type":"related"},{"name":"proline, 2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"},{"name":"prolyl-glycyl-peptide, 2-oxoglutarate:oxygen oxidoreductase, 4-hydroxylating activity","type":"broad"},{"name":"prolylprotocollagen dioxygenase activity","type":"related"},{"name":"prolylprotocollagen hydroxylase activity","type":"related"},{"name":"protocollagen hydroxylase activity","type":"broad"},{"name":"protocollagen proline 4-hydroxylase activity","type":"related"},{"name":"protocollagen proline dioxygenase activity","type":"related"},{"name":"protocollagen proline hydroxylase activity","type":"related"},{"name":"protocollagen prolyl hydroxylase activity","type":"related"}],"termid":"GO:0004656"}


id: PR:O59817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efr3 gene.","definition_xrefs":["UniProtKB:O59817","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein efr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.08","synonyms":[{"name":"Spom972h-efr3","type":"exact"}],"termid":"PR:O59817"}


id: PBO:0059861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein-like 3, pseudogene","termid":"PBO:0059861"}


id: PBO:0064543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 4, pseudogene","termid":"PBO:0064543"}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: PBO:0056011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056011"}


id: PBO:0026967
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_horsetail_movement","termid":"PBO:0026967"}


id: GO:0016104
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65745,84869],"is_not":false,"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triterpenoid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"triterpenoid synthesis","type":"exact"},{"name":"triterpenoid formation","type":"exact"},{"name":"triterpene biosynthesis","type":"narrow"},{"name":"triterpene biosynthetic process","type":"narrow"},{"name":"triterpenoid anabolism","type":"exact"},{"name":"triterpenoid biosynthesis","type":"exact"}],"termid":"GO:0016104","terms_by_termid":{"GO:0016104":null}}


id: PBO:0044210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin S","termid":"PBO:0044210"}


id: PBO:0077497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 216","termid":"PBO:0077497"}


id: PBO:0029067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_salt_stress","termid":"PBO:0029067"}


id: FYPO:0004961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is increased.","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at replication origin","synonyms":[{"name":"increased protein localisation to chromatin at replication origin","type":"exact"},{"name":"increased protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at replication origins during vegetative growth","type":"exact"}],"termid":"FYPO:0004961"}


id: GO:0003430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a growth plate cartilage chondrocyte, where growth contributes to the progression of the chondrocyte over time from one condition to another.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte hypertrophy","termid":"GO:0003415"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte growth","synonyms":[{"name":"growth plate cartilage chondrocyte hypertrophy","type":"exact"}],"termid":"GO:0003430"}


id: GO:2000469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of peroxidase activity","termid":"GO:2000468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peroxidase activity","synonyms":[{"name":"negative regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of oxyperoxidase activity","type":"exact"},{"name":"negative regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000469"}


id: PBO:0042843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 47","termid":"PBO:0042843"}


id: GO:0061239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the mesonephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in mesonephric nephron morphogenesis","termid":"GO:0061239"}


id: GO:0140677
data:
  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id: GO:0042432
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id: PBO:0049462
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 2","termid":"PBO:0049462"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: FYPO:0006187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is normal (i.e. indistinguishable from wild type). Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actomyosin contractile ring assembly","synonyms":[{"name":"normal rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal rate of contractile ring assembly","type":"exact"},{"name":"normal rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006187"}


id: PBO:0027354
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyruvate_decarboxylase_activity_during_stationary_phase","termid":"PBO:0027354"}


id: GO:0035137
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindlimb are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindlimb morphogenesis","termid":"GO:0035137"}


id: PBO:0018118
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP14 microtubule-associated protein Dis1","termid":"PBO:0018118"}


id: PATO:0000134
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000134 absolute_angle (obsolete PATO:0000134)","termid":"PATO:0000134"}


id: FYPO:0003964
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutathione disulfide oxidoreductase activity","synonyms":[{"name":"reduced glutathione disulfide oxidoreductase activity","type":"exact"}],"termid":"FYPO:0003964"}


id: GO:2000717
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000717"}


id: PBO:0084068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase inhibitor with similarity to F-box proteins; inhibits Ypt52p GTPase activity by preventing Ypt52p from binding GTP; involved in regulating intracellular trafficking; physically interacts with Skp1p","termid":"PBO:0084068"}


id: PBO:0069561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 833, pseudogene","termid":"PBO:0069561"}


id: PBO:0075738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 19","termid":"PBO:0075738"}


id: PBO:0084885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization","termid":"PBO:0084885"}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: FYPO:0001406
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased septum thickness","synonyms":[{"name":"increased septal material","type":"related"},{"name":"increased septum thickness during mitotic cell cycle","type":"related"},{"name":"increased septum thickness during vegetative growth","type":"exact"},{"name":"thick septum","type":"exact"}],"termid":"FYPO:0001406"}


id: PBO:0068013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 318","termid":"PBO:0068013"}


id: PR:Q9USS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyrazinamidase/nicotinamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03298","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.20c","secondary_identifiers":["UniProtKB:Q9USS0"],"synonyms":[{"name":"NAMase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pncA","type":"exact"},{"name":"nicotine deamidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USS0"}


id: PBO:0089220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-like protein involved in autophagy Clg1","termid":"PBO:0089220"}


id: PR:P36589
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["UniProtKB:P36589","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: FYPO:0003221
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein acetylation during vegetative growth","termid":"FYPO:0003362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone acetylation during vegetative growth","synonyms":[{"name":"normal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003221"}


id: PBO:0058467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5196","termid":"PBO:0058467"}


id: PR:O74875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC330.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized heme-binding protein C330.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.03c","synonyms":[{"name":"Spom972h-SPCC330.03c","type":"exact"}],"termid":"PR:O74875"}


id: PBO:0040235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF6 divergent transcript","termid":"PBO:0040235"}


id: GO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to monoamine","synonyms":[{"name":"response to monoamine stimulus","type":"exact"}],"termid":"GO:0071867"}


id: GO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["CL:0000333","PMID:17076275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neural crest cell delamination","synonyms":[{"name":"neural crest cell emigration","type":"exact"},{"name":"neural crest cell individualization","type":"exact"},{"name":"neural crest cell segregation","type":"related"}],"termid":"GO:0036032"}


id: PBO:0012828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-present_during","termid":"PBO:0012828"}


id: PR:Q9C101
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1E7.08c gene.","definition_xrefs":["UniProtKB:Q9C101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter PB1E7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.08c","synonyms":[{"name":"Spom972h-SPAPB1E7.08c","type":"exact"}],"termid":"PR:Q9C101"}


id: MOD:02065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"}


id: GO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.","definition_xrefs":["PMID:22556419","RHEA:62356","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"8-oxo-GDP phosphatase activity","secondary_identifiers":["EC:3.6.1.58","Reactome:R-HSA-2395873"],"termid":"GO:0044716"}


id: PBO:0067320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 408, pseudogene","termid":"PBO:0067320"}


id: PBO:0075662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 2","termid":"PBO:0075662"}


id: GO:0140539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:18457993","PMID:15749104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"}


id: GO:2000401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte migration","termid":"GO:2000401"}


id: GO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic A cell over time, from its formation to the mature structure. A pancreatic A cell is a cell in the pancreas that secretes glucagon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic A cell development","synonyms":[{"name":"pancreatic alpha cell development","type":"exact"}],"termid":"GO:0003322"}


id: GO:0045259
data:
  {"annotated_genes":["SJAG_02598","SJAG_00915","SJAG_MIT15","SJAG_02564","SJAG_05204","SJAG_07003","SJAG_00438","SJAG_MIT37","SJAG_04122","SJAG_03925","SJAG_00542","SJAG_00133","SJAG_MIT09","SJAG_00985","SJAG_03114","SJAG_00836","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88948,99126,104864,101080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045261"},{"annotations":[115100,99752,115094,90946,115104,89374,103980,99781,89972,97909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045263"},{"annotations":[85256],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045267"},{"annotations":[103891,111910],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045265"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that catalyzes the phosphorylation of ADP to ATP during oxidative phosphorylation. The complex comprises a membrane sector (F0) that carries out proton transport and a cytoplasmic compartment sector (F1) that catalyzes ATP synthesis by a rotational mechanism; the extramembrane sector (containing 3 a and 3 b subunits) is connected via the d-subunit to the membrane sector by several smaller subunits. Within this complex, the g and e subunits and the 9-12 c subunits rotate by consecutive 120 degree angles and perform parts of ATP synthesis. This movement is driven by the hydrogen ion electrochemical potential gradient.","definition_xrefs":["ISBN:0716743663","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045255"],"synonyms":[{"name":"F1-F0 complex","type":"exact"},{"name":"hydrogen-translocating F-type ATPase complex","type":"exact"},{"name":"hydrogen-transporting ATP synthase complex","type":"exact"},{"name":"proton-transporting F-type ATPase complex","type":"related"}],"termid":"GO:0045259","terms_by_termid":{"GO:0045261":null,"GO:0045263":null,"GO:0045265":null,"GO:0045267":null}}


id: GO:0006199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP reduction (obsolete GO:0006199)","synonyms":[{"name":"ADP reduction","type":"exact"}],"termid":"GO:0006199"}


id: GO:0021736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the globose nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"globose nucleus development","termid":"GO:0021736"}


id: GO:1902126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-pinoresinol.","definition_xrefs":["PMID:9872995","GOC:TermGenie","PMID:8910615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol biosynthetic process","synonyms":[{"name":"(+)-pinoresinol anabolism","type":"exact"},{"name":"(+)-pinoresinol biosynthesis","type":"exact"},{"name":"(+)-pinoresinol formation","type":"exact"},{"name":"(+)-pinoresinol synthesis","type":"exact"}],"termid":"GO:1902126"}


id: FYPO:0005552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow rim is decreased. The rim is the part of the cleavage furrow closest to the contractile ring.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cleavage furrow","termid":"FYPO:0005551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cleavage furrow rim","synonyms":[{"name":"decreased protein localisation to cleavage furrow rim","type":"exact"},{"name":"decreased protein localization to cleavage furrow rim during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cleavage furrow rim during vegetative growth","type":"exact"},{"name":"reduced protein localization to cleavage furrow rim","type":"exact"}],"termid":"FYPO:0005552"}


id: GO:0048622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of reproductive spores.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete reproductive sporulation (obsolete GO:0048622)","synonyms":[{"name":"reproductive sporulation","type":"exact"}],"termid":"GO:0048622"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:15560120","GOC:mah","PMID:10891884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:1904467","GO:0042534"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: GO:1903367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fear response.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000058","PMID:8677262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"positively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fear response","synonyms":[{"name":"activation of fear response","type":"narrow"},{"name":"activation of physiological fear response","type":"narrow"},{"name":"positive regulation of physiological fear response","type":"exact"},{"name":"up regulation of fear response","type":"exact"},{"name":"up regulation of physiological fear response","type":"exact"},{"name":"up-regulation of fear response","type":"exact"},{"name":"up-regulation of physiological fear response","type":"exact"},{"name":"upregulation of fear response","type":"exact"},{"name":"upregulation of physiological fear response","type":"exact"}],"termid":"GO:1903367"}


id: FYPO:0000860
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115163,115165],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115164,115166],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[115278,115286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[115285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[115244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[115277,115281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[115149],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115301],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115151],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115656,115658,115657],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[115271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"},{"annotations":[115150],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal. A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["GO:0044237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"abnormal cellular 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from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild 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leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"abnormal metabolic process","references_by_uniquename":{"PMID:23786411":null,"PMID:26774782":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551","SJAG_02592","SJAG_03689","SJAG_03575","SJAG_04697","SJAG_03351","SJAG_02796","SJAG_01956","SJAG_03940","SJAG_01787"],"single_locus_genotype_uniquenames":["pck2delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","dcr1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","nem2delta","gms1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pck1delta","sty1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular metabolic process","type":"exact"},{"name":"abnormal metabolism","type":"exact"}],"termid":"FYPO:0000860","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001327":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null,"FYPO:0005957":null,"FYPO:0007363":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0066772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 70","termid":"PBO:0066772"}


id: PBO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_tapered_vegetative_cell","termid":"PBO:0030173"}


id: GO:0042867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyruvate catabolic process","synonyms":[{"name":"pyruvate breakdown","type":"exact"},{"name":"pyruvate catabolism","type":"exact"},{"name":"pyruvate degradation","type":"exact"}],"termid":"GO:0042867"}


id: GO:1904946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt(II) acetate stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:24315322","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to cobalt(II) acetate (obsolete GO:1904946)","termid":"GO:1904946"}


id: PBO:0028292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly","termid":"PBO:0028292"}


id: GO:0004016
data:
  {"annotated_genes":["SJAG_01254"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101979],"is_not":false,"summary":null,"term":"GO:0004016"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.","definition_xrefs":["EC:4.6.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0009975","GO:0003824"],"is_obsolete":false,"name":"adenylate cyclase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170676","MetaCyc:ADENYLATECYC-RXN","Reactome:R-HSA-9712183","Reactome:R-HSA-164377","Reactome:R-HSA-5211224","Reactome:R-HSA-5610727","RHEA:15389","Reactome:R-HSA-381607","Reactome:R-HSA-392129"],"synonyms":[{"name":"3',5'-cyclic AMP synthetase activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"ATP diphosphate-lyase (cyclizing; 3',5'-cyclic-AMP-forming) activity","type":"related"},{"name":"ATP pyrophosphate-lyase activity","type":"related"},{"name":"adenyl cyclase activity","type":"related"},{"name":"adenylyl cyclase activity","type":"exact"},{"name":"adenylylcyclase activity","type":"related"},{"name":"cAMP generating peptide activity","type":"related"}],"termid":"GO:0004016","terms_by_termid":{"GO:0004016":null}}


id: GO:0102988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-hexadecadienoyl-CoA + O2 + a reduced electron acceptor = 9,12,15-cis-hexadecatrienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,12-cis-hexadecadienoic acid delta 15 desaturase activity","secondary_identifiers":["MetaCyc:RXN-9617","RHEA:46232"],"termid":"GO:0102988"}


id: PBO:0053191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA negative regulator of fibroblast-like synoviocyte migration, SYNCRIP interacting","termid":"PBO:0053191"}


id: GO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 79 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 acetylation (obsolete GO:0043976)","synonyms":[{"name":"histone H3 acetylation at K79","type":"exact"},{"name":"histone H3K79 acetylation","type":"exact"}],"termid":"GO:0043976"}


id: GO:0009209
data:
  {"annotated_genes":["SJAG_02887","SJAG_00412","SJAG_00964","SJAG_03708","SJAG_05024","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110980,89062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[102590,96169,89518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009209","terms_by_termid":{"GO:0006228":null,"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: PBO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A like (without C2 domains)","termid":"PBO:0070437"}


id: PBO:0045926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF containing fibulin extracellular matrix protein 2","termid":"PBO:0045926"}


id: PBO:0089760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad55/Rhp55","termid":"PBO:0089760"}


id: PATO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblong","termid":"PATO:0000946"}


id: PBO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 2 pseudogene 2","termid":"PBO:0052593"}


id: PBO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1 (predicted)","termid":"PBO:0004187"}


id: PBO:0090095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, with CRAL-TRIO_domain Rga10","termid":"PBO:0090095"}


id: GO:0032366
data:
  {"annotated_genes":["SJAG_01329","SJAG_00261","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97570,97760,102401],"is_not":false,"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_01329":null,"SJAG_01407":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular sterol transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032366","terms_by_termid":{"GO:0032366":null}}


id: GO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:dph","GOC:hjd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"negative regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010727"}


id: PR:Q9Y7M5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L15, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03015","PANTHER:PTHR12934:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.06","secondary_identifiers":["UniProtKB:Q9Y7M5"],"synonyms":[{"name":"Spom972h-MRPL15","type":"exact"}],"termid":"PR:Q9Y7M5"}


id: PBO:0090169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface protein involved in ascospore wall assembly, GPI anchored Meu10","termid":"PBO:0090169"}


id: PBO:0036305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1 (predicted)","termid":"PBO:0036305"}


id: PR:O14017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.14c gene.","definition_xrefs":["UniProtKB:O14017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.14c","synonyms":[{"name":"Spom972h-SPAC29A4.14c","type":"exact"}],"termid":"PR:O14017"}


id: PBO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-23","termid":"PBO:0075012"}


id: PR:O13647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8D2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.11","synonyms":[{"name":"Spom972h-SPBC8D2.11","type":"exact"}],"termid":"PR:O13647"}


id: GO:0044601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a nucleotide from a protein amino acid.","definition_xrefs":["PMID:21734656","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein denucleotidylation","termid":"GO:0044601"}


id: PBO:0051072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-24 (non-functional)","termid":"PBO:0051072"}


id: PBO:0083547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YBL095W","termid":"PBO:0083547"}


id: GO:0000244
data:
  {"annotated_genes":["SJAG_04497","SJAG_00278","SJAG_01547","SJAG_04529","SJAG_02915","SJAG_03214","SJAG_00643","SJAG_00414"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93511,94122,98285,101569,102625,107783,108326,110456],"is_not":false,"summary":null,"term":"GO:0000244"}]},"cv_name":"biological_process","definition":"The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex.","definition_xrefs":["ISBN:0879695897","PMID:9452384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP assembly","termid":"GO:0000387"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00278":null,"SJAG_00414":null,"SJAG_00643":null,"SJAG_01547":null,"SJAG_02915":null,"SJAG_03214":null,"SJAG_04497":null,"SJAG_04529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0010467","GO:0016071","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"spliceosomal tri-snRNP complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000351","GO:0000355"],"synonyms":[{"name":"assembly of spliceosomal tri-snRNP","type":"exact"},{"name":"assembly of spliceosomal tri-snRNP U4/U6.U5","type":"narrow"},{"name":"assembly of spliceosomal tri-snRNP U4atac/U6atac.U5","type":"narrow"},{"name":"snRNP recycling","type":"broad"},{"name":"spliceosomal tri-snRNP U4/U6.U5 assembly","type":"narrow"},{"name":"spliceosomal tri-snRNP U4atac/U6atac.U5 assembly","type":"narrow"},{"name":"spliceosomal tri-snRNP assembly","type":"exact"}],"termid":"GO:0000244","terms_by_termid":{"GO:0000244":null}}


id: PBO:0091780
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteractor of CENP-A loading Protein","termid":"PBO:0091780"}


id: GO:0047075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + 2,5-dihydroxypyridine = formate + maleamate.","definition_xrefs":["MetaCyc:1.13.11.9-RXN","EC:1.13.11.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-dihydroxypyridine 5,6-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1443","RHEA:27522"],"synonyms":[{"name":"2,5-dihydroxypyridine oxygenase activity","type":"related"},{"name":"2,5-dihydroxypyridine:oxygen 5,6-oxidoreductase activity","type":"related"},{"name":"pyridine-2,5-diol dioxygenase activity","type":"related"}],"termid":"GO:0047075"}


id: GO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a salicylic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of salicylic acid stimulus","synonyms":[{"name":"perception of salicylic acid stimulus","type":"related"}],"termid":"GO:0009752"}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: PBO:0067884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 186","termid":"PBO:0067884"}


id: PBO:0013020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Rad52 (previously Rad22)","termid":"PBO:0013020"}


id: GO:1990922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hepatic stellate cells, resulting in the expansion of a hepatic stellate cell population. Hepatic stellate cells are found in the perisinusoidal space of the liver, and are capable of multiple roles including storage of retinol, presentation of antigen to T cells (including CD1d-restricted NKT cells), and upon activation, production of extracellular matrix components. This cell type comprises approximately 8-15% of total cells in the liver.","definition_xrefs":["GOC:sl","PMID:15358192","PMID:18466260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell proliferation","synonyms":[{"name":"Ito cell proliferation","type":"exact"},{"name":"hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1990922"}


id: GO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075116)","synonyms":[{"name":"activation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"positive regulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"},{"name":"promotion by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"stimulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"upregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"}],"termid":"GO:0075116"}


id: GO:0052202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052202)","synonyms":[{"name":"down regulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"down-regulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"downregulation by symbiont of defense-related host cell wall callose deposition","type":"exact"},{"name":"inhibition by symbiont of defense-related host cell wall callose deposition","type":"narrow"},{"name":"negative regulation by organism of defense-related callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host callose deposition","type":"broad"}],"termid":"GO:0052202"}


id: GO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075159)","synonyms":[{"name":"regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075159"}


id: GO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the splicing of host mRNA, thus interfering with normal host protein production. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19729513","PMID:12660167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host mRNA processing","termid":"GO:0039524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA splicing","secondary_identifiers":["GO:0046781"],"synonyms":[{"name":"negative regulation by virus of host mRNA splicing","type":"narrow"},{"name":"suppression by virus of host mRNA splicing","type":"narrow"},{"name":"suppression by virus of host splicing factor activity","type":"exact"},{"name":"viral dispersion of host splicing factors","type":"narrow"},{"name":"viral inhibition of host mRNA splicing","type":"narrow"}],"termid":"GO:0046780"}


id: PBO:0060567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 3","termid":"PBO:0060567"}


id: PBO:0065851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 2","termid":"PBO:0065851"}


id: PBO:0046813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII A chain","termid":"PBO:0046813"}


id: GO:1900447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell morphogenesis contributing a phenotypic switch. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells, such as the opaque cells of C. albicans, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"part_of","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell morphogenesis involved in phenotypic switching","synonyms":[{"name":"negative regulation of cell shape and cell size of phenotypic dimorphism","type":"related"},{"name":"negative regulation of cell shape and cell size of phenotypic switching","type":"related"},{"name":"positive regulation of cell shape and cell size of phenotypic dimorphism","type":"related"},{"name":"positive regulation of cell shape and cell size of phenotypic switching","type":"related"},{"name":"regulation of cell morphogenesis of phenotypic dimorphism","type":"related"},{"name":"regulation of cell morphogenesis of phenotypic switching","type":"exact"},{"name":"regulation of cell shape and cell size of phenotypic dimorphism","type":"related"},{"name":"regulation of cell shape and cell size of phenotypic switching","type":"related"}],"termid":"GO:1900447"}


id: PBO:0086831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function identified by gene-trapping; microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element","termid":"PBO:0086831"}


id: PBO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 1","termid":"PBO:0045587"}


id: GO:0098033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fiber attached to the neck at the base of some icosahedral viral capsids.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid, fiber","termid":"GO:0098022"},{"relation_name":"part_of","term_name":"icosahedral viral capsid, neck","termid":"GO:0098030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"icosahedral viral capsid, neck fiber","termid":"GO:0098033"}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: PBO:0003586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transporter (predicted)","termid":"PBO:0003586"}


id: PBO:0068654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 35, pseudogene","termid":"PBO:0068654"}


id: PR:O13351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmt3 gene.","definition_xrefs":["UniProtKB:O13351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein pmt3/smt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.06","synonyms":[{"name":"Spom972h-pmt3","type":"exact"}],"termid":"PR:O13351"}


id: PBO:0084566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane peroxin of the peroxisomal importomer complex; complex facilitates the import of peroxisomal matrix proteins; required for peroxisome biogenesis","termid":"PBO:0084566"}


id: GO:2001002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"positively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xylan catabolic process","synonyms":[{"name":"positive regulation of xylan breakdown","type":"exact"},{"name":"positive regulation of xylan catabolism","type":"exact"},{"name":"positive regulation of xylan degradation","type":"exact"}],"termid":"GO:2001002"}


id: GO:0016552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The insertion into or deletion from an RNA molecule of nucleotide residues not encoded in DNA; takes place during transcription.","definition_xrefs":["PMID:11092837"],"gene_count":0,"genotype_count":0,"name":"obsolete cotranscriptional insertion or deletion editing (obsolete GO:0016552)","synonyms":[{"name":"cotranscriptional insertion or deletion editing","type":"exact"},{"name":"cotranscriptional insertion/deletion editing","type":"exact"}],"termid":"GO:0016552"}


id: GO:0018717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + glucose = 9-phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol glycosyltransferase activity (obsolete GO:0018717)","termid":"GO:0018717"}


id: GO:0032690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 alpha production","termid":"GO:0032650"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050712","GO:0050723"],"synonyms":[{"name":"down regulation of interleukin-1 alpha production","type":"exact"},{"name":"down-regulation of interleukin-1 alpha production","type":"exact"},{"name":"downregulation of interleukin-1 alpha production","type":"exact"},{"name":"inhibition of interleukin-1 alpha production","type":"narrow"},{"name":"negative regulation of IL-1 alpha production","type":"exact"},{"name":"negative regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032690"}


id: PBO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 4","termid":"PBO:0072127"}


id: GO:0047585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-pyridoxolactone + H2O = 4-pyridoxate + H+.","definition_xrefs":["EC:3.1.1.27","RHEA:14301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"4-pyridoxolactonase activity","secondary_identifiers":["KEGG_REACTION:R02992","MetaCyc:4-PYRIDOXOLACTONASE-RXN"],"synonyms":[{"name":"4-pyridoxolactone lactonohydrolase activity","type":"related"}],"termid":"GO:0047585"}


id: GO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic linkages in pullulan (a linear polymer of alpha-(1,6)-linked maltotriose units) and in amylopectin and glycogen, and the a- and b-limit dextrins of amylopectin and glycogen.","definition_xrefs":["EC:3.2.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"pullulanase activity","secondary_identifiers":["MetaCyc:RXN-1824"],"synonyms":[{"name":"R-enzyme","type":"related"},{"name":"alpha-dextrin endo-1,6-alpha-glucosidase activity","type":"exact"},{"name":"amylopectin 6-glucanohydrolase activity","type":"exact"},{"name":"bacterial debranching enzyme","type":"related"},{"name":"debranching enzyme activity","type":"broad"},{"name":"limit dextrinase","type":"related"},{"name":"pullulan 6-glucanohydrolase activity","type":"exact"},{"name":"pullulan alpha-1,6-glucanohydrolase activity","type":"related"}],"termid":"GO:0051060"}


id: PBO:0031588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biofilm_formation","termid":"PBO:0031588"}


id: PBO:0059657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 23","termid":"PBO:0059657"}


id: GO:1905117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribonucleoside-diphosphate reductase activity.","definition_xrefs":["GO_REF:0000059","PMID:24733891","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonucleoside-diphosphate reductase activity","synonyms":[{"name":"regulation of RNR","type":"related"},{"name":"regulation of adenosylcobalamin-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of aerobic non-heme iron-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of anaerobic iron-sulfur-dependent ribonucleotide reductase activity","type":"related"},{"name":"regulation of class I ribonucleotide reductase activity","type":"related"},{"name":"regulation of class II ribonucleoside-diphosphate reductase activity","type":"related"},{"name":"regulation of class II ribonucleotide reductase activity","type":"related"},{"name":"regulation of class III ribonucleotide reductase activity","type":"related"},{"name":"regulation of nucleoside diphosphate reductase activity","type":"related"},{"name":"regulation of purine/pyrimidine nucleoside diphosphate reduction","type":"related"},{"name":"regulation of ribonucleoside 5'-diphosphate reductase activity","type":"related"},{"name":"regulation of ribonucleotide diphosphate reductase activity","type":"exact"},{"name":"regulation of ribonucleotide reductase activity","type":"broad"}],"termid":"GO:1905117"}


id: GO:0003366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of an ameboid cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"}


id: PBO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component I (predicted)","termid":"PBO:0005634"}


id: PBO:0053579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 602","termid":"PBO:0053579"}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: GO:0004409
data:
  {"annotated_genes":["SJAG_01574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92783],"is_not":false,"summary":null,"term":"GO:0004409"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-homoisocitrate = cis-homoaconitate + H2O.","definition_xrefs":["EC:4.2.1.36","RHEA:15485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"homoaconitate hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04371","MetaCyc:HOMOACONITATE-HYDRATASE-RXN"],"synonyms":[{"name":"(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate hydro-lyase [(Z)-but-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxybutane-1,2,4-tricarboxylate hydro-lyase activity","type":"related"},{"name":"HACN activity","type":"related"},{"name":"Lys4","type":"related"},{"name":"LysF","type":"related"},{"name":"cis-homoaconitase activity","type":"related"},{"name":"homoaconitase activity","type":"related"}],"termid":"GO:0004409","terms_by_termid":{"GO:0004409":null}}


id: PBO:0064979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 35, pseudogene","termid":"PBO:0064979"}


id: PR:Q10100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear transport factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15F9.03c","secondary_identifiers":["UniProtKB:Q10100"],"synonyms":[{"name":"NTF-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NUTF2","type":"exact"}],"termid":"PR:Q10100"}


id: PBO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_structure","termid":"PBO:0036010"}


id: PBO:0036301
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative splicing","termid":"PBO:0036301"}


id: GO:0106434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reactions involved in isomerization of all trans to all cis retnal.","definition_xrefs":["PMID:21447403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal metabolic process","termid":"GO:0042574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinal isomerization","termid":"GO:0106434"}


id: PBO:0063378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin","termid":"PBO:0063378"}


id: GO:2000207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal small subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal subunit export from nucleus","termid":"GO:2000201"},{"relation_name":"is_a","term_name":"regulation of ribosomal small subunit export from nucleus","termid":"GO:2000206"},{"relation_name":"negatively_regulates","term_name":"ribosomal small subunit export from nucleus","termid":"GO:0000056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"negatively_regulates","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"negative regulation of ribosomal small subunit export from nucleus","synonyms":[{"name":"negative regulation of 30S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of 40S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal small subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:2000207"}


id: PBO:0058107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4322","termid":"PBO:0058107"}


id: GO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of competence for transformation","synonyms":[{"name":"activation of establishment of competence for transformation","type":"narrow"},{"name":"activator of the establishment of competence for transformation activity","type":"related"},{"name":"stimulation of establishment of competence for transformation","type":"narrow"},{"name":"up regulation of establishment of competence for transformation","type":"exact"},{"name":"up-regulation of establishment of competence for transformation","type":"exact"},{"name":"upregulation of establishment of competence for transformation","type":"exact"}],"termid":"GO:0045809"}


id: PBO:0089461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)","termid":"PBO:0089461"}


id: PBO:0062528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 8","termid":"PBO:0062528"}


id: GO:0062073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex composed of a stem-loop binding protein (in most species SLBP) and its interacting partner (SLIP1 or MIF4GD in most species) that binds to the histone mRNA (hmRNA) 3-prime-stem-loop structure. Facilitates hmRNA translation initiation and may also be involved in its processing and nuclear export.","definition_xrefs":["GOC:bhm","PMID:18025107","PMID:23286197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"histone mRNA stem-loop binding complex","synonyms":[{"name":"SLBP-MIF4GD complex","type":"narrow"},{"name":"SLBP-SLIP1 complex","type":"narrow"}],"termid":"GO:0062073"}


id: GO:0099044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a transport vesicle membrane and the membrane of the endoplasmic reticulum. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior fusion.","definition_xrefs":["PMID:27243008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering","termid":"GO:0099022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle tethering to endoplasmic reticulum","termid":"GO:0099044"}


id: PR:000050399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, MOD:00047.","definition_xrefs":["PomBase:VW","PMID:23333317","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/Phos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/Phos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, MOD:00047","type":"narrow"},{"name":"cut12/Phos(T75,T78)","type":"exact"}],"termid":"PR:000050399"}


id: PBO:0017656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr2 (predicted)","termid":"PBO:0017656"}


id: SO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome deficiency aberration generated by reassortment of other aberration components.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_deficiency","synonyms":[{"name":"assortment-derived deficiency","type":"exact"}],"termid":"SO:0000802"}


id: PBO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functions coordinately with the protein kinase C pathway","termid":"PBO:0003312"}


id: PBO:0086138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mismatch repair in mitosis and meiosis; forms a complex with Msh2p to repair both single-base & insertion-deletion mispairs; also involved in interstrand cross-link repair; potentially phosphorylated by Cdc28p; contains PIP motif that binds PCNA (Pol30p) and Rev1p","termid":"PBO:0086138"}


id: PR:O14033
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B12.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.12","synonyms":[{"name":"Spom972h-SPAC29B12.12","type":"exact"}],"termid":"PR:O14033"}


id: PBO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 1","termid":"PBO:0048171"}


id: GO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell proliferation","termid":"GO:0032946"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte activation","termid":"GO:0051251"},{"relation_name":"positively_regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte proliferation","synonyms":[{"name":"activation of lymphocyte proliferation","type":"narrow"},{"name":"stimulation of lymphocyte proliferation","type":"narrow"},{"name":"up regulation of lymphocyte proliferation","type":"exact"},{"name":"up-regulation of lymphocyte proliferation","type":"exact"},{"name":"upregulation of lymphocyte proliferation","type":"exact"}],"termid":"GO:0050671"}


id: PBO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head domain","termid":"PBO:0002156"}


id: PBO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_centromere_during_vegetative_growth","termid":"PBO:0036062"}


id: PBO:0078761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 4","termid":"PBO:0078761"}


id: PBO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 28","termid":"PBO:0071890"}


id: GO:0052381
data:
  {"annotated_genes":["SJAG_01575"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92778],"is_not":false,"summary":null,"term":"GO:0052381"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + tRNA = diphosphate + tRNA containing 6-dimethylallyladenosine.","definition_xrefs":["EC:2.5.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01575":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0016765","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"tRNA dimethylallyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6784462","Reactome:R-HSA-6787567","RHEA:26482","MetaCyc:RXN0-6274","GO:0004811"],"synonyms":[{"name":"dimethylallyl-diphosphate:tRNA dimethylallyltransferase activity","type":"exact"},{"name":"tRNA isopentenyltransferase activity","type":"related"},{"name":"tRNA prenyltransferase activity","type":"broad"}],"termid":"GO:0052381","terms_by_termid":{"GO:0052381":null}}


id: GO:1990215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts vesicle-mediated transport in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:31492901","PMID:22319451","PMID:24248335","PMID:30893609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host intracellular transport","termid":"GO:0052038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vesicle-mediated transport","synonyms":[{"name":"negative regulation by symbiont of host intracellular transport","type":"broad"},{"name":"symbiont-mediated perturbation of host endosomal trafficking","type":"related"}],"termid":"GO:1990215"}


id: PBO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 11","termid":"PBO:0062112"}


id: PBO:0044952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone)","termid":"PBO:0044952"}


id: GO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrotoluene metabolic process","termid":"GO:0019257"},{"relation_name":"is_a","term_name":"nitrotoluene catabolic process","termid":"GO:0046263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-nitrotoluene catabolic process","secondary_identifiers":["MetaCyc:P421-PWY"],"synonyms":[{"name":"4-nitrotoluene breakdown","type":"exact"},{"name":"4-nitrotoluene catabolism","type":"exact"},{"name":"4-nitrotoluene degradation","type":"exact"},{"name":"4NT catabolic process","type":"exact"},{"name":"4NT catabolism","type":"exact"}],"termid":"GO:0019258"}


id: PBO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 18","termid":"PBO:0070886"}


id: GO:0052427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in symbiont peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont peptidase activity (obsolete GO:0052427)","synonyms":[{"name":"modulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052427"}


id: PBO:0040327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 2","termid":"PBO:0040327"}


id: FYPO:0004571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during cellular response to oxidative stress","termid":"FYPO:0001279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"increased RNA level during cellular response to H2O2","type":"exact"},{"name":"increased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"increased transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004571"}


id: PBO:0077587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMPO antisense RNA 1","termid":"PBO:0077587"}


id: PBO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Mot1 (predicted)","termid":"PBO:0004129"}


id: PBO:0067917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 219","termid":"PBO:0067917"}


id: GO:0070534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a protein. K63-linked ubiquitination does not target the substrate protein for degradation, but is involved in several pathways, notably as a signal to promote error-free DNA postreplication repair.","definition_xrefs":["PMID:15556404","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K63-linked ubiquitination","synonyms":[{"name":"protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:0070534"}


id: GO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:dph","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"}


id: PBO:0064319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 1","termid":"PBO:0064319"}


id: PBO:0085508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; N-terminally propionylated in vivo; RPS11A has a paralog, RPS11B, that arose from the whole genome duplication","termid":"PBO:0085508"}


id: GO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of a second organism, where the two organisms are in a symbiotic interaction. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down the tissue of the second organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development in other organism during symbiotic interaction (obsolete GO:0051831)","synonyms":[{"name":"growth or development in other organism during symbiotic interaction","type":"exact"},{"name":"growth or development within other organism during symbiotic interaction","type":"exact"},{"name":"invasive growth","type":"broad"}],"termid":"GO:0051831"}


id: GO:1900571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diorcinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"diorcinol metabolic process","termid":"GO:1900570"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"diorcinol catabolic process","synonyms":[{"name":"diorcinol breakdown","type":"exact"},{"name":"diorcinol catabolism","type":"exact"},{"name":"diorcinol degradation","type":"exact"}],"termid":"GO:1900571"}


id: GO:0042173
data:
  {"annotated_genes":["SJAG_04853","SJAG_04140","SJAG_02169","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042173","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0060678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dependent diflavin oxidoreductase 1","termid":"PBO:0060678"}


id: PATO:0002149
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer exhibiting increased density resulting in exhibiting increased degree of radiopacity (in X-rays).","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mass density","termid":"PATO:0001788"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ivory","termid":"PATO:0002149"}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["UniProtKB:O14244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: PATO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000036 water content (obsolete PATO:0000036)","termid":"PATO:0000036"}


id: PBO:0040550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3","termid":"PBO:0040550"}


id: MOD:01470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (E)-dehydrobutyrine.","definition_xrefs":["PubMed:20805503","PubMed:1547888","PubMed:3769923","DeltaMass:0","RESID:AA0547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(E)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2E)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(E)-2-amino-2-butenoic acid","type":"exact"},{"name":"(E)-2-aminobutenoic acid","type":"exact"},{"name":"(E)-dehydrobutyrine","type":"exact"},{"name":"(E)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (E)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01470"}


id: PBO:0087013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease MRP complex subunit; ribonuclease (RNase) MRP cleaves pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; binds to the NME1 RNA subunit of RNase MRP","termid":"PBO:0087013"}


id: GO:0004607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine.","definition_xrefs":["EC:2.3.1.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activity","secondary_identifiers":["RHEA:21204","Reactome:R-HSA-264695","MetaCyc:2.3.1.43-RXN"],"synonyms":[{"name":"LCAT (lecithin-cholesterol acyltransferase)","type":"related"},{"name":"LCAT activity","type":"related"},{"name":"lecithin--cholesterol acyltransferase activity","type":"related"},{"name":"lecithin:cholesterol acyltransferase activity","type":"related"},{"name":"phosphatidylcholine:sterol O-acyltransferase activity","type":"related"},{"name":"phospholipid--cholesterol acyltransferase activity","type":"related"}],"termid":"GO:0004607"}


id: GO:2000754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingomyelin catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"sphingomyelin catabolic process","termid":"GO:0006685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"regulation of sphingomyelin catabolic process","synonyms":[{"name":"regulation of sphingomyelin breakdown","type":"exact"},{"name":"regulation of sphingomyelin catabolism","type":"exact"},{"name":"regulation of sphingomyelin degradation","type":"exact"}],"termid":"GO:2000754"}


id: PBO:0078169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 2","termid":"PBO:0078169"}


id: PBO:0029098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_sulfate_sulfur_source","termid":"PBO:0029098"}


id: PBO:0078073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 2","termid":"PBO:0078073"}


id: PBO:0059672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 38","termid":"PBO:0059672"}


id: GO:0008021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle, typically 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.","definition_xrefs":["PMID:10099709","PMID:12563290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicle","termid":"GO:0070382"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"synaptic vesicle","secondary_identifiers":["NIF_Subcellular:sao1071221672","Wikipedia:Synaptic_vesicle"],"synonyms":[{"name":"docked vesicle","type":"narrow"}],"termid":"GO:0008021"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: PBO:0052458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 7 pseudogene 1","termid":"PBO:0052458"}


id: PR:Q9HDY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.06c gene.","definition_xrefs":["UniProtKB:Q9HDY4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase PB1A10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.06c","synonyms":[{"name":"Spom972h-SPAPB1A10.06c","type":"exact"}],"termid":"PR:Q9HDY4"}


id: PBO:0068808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 45, pseudogene","termid":"PBO:0068808"}


id: PBO:0062500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily F member 1 pseudogene","termid":"PBO:0062500"}


id: GO:0023059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The positive regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"adaptation of signaling pathway","termid":"GO:0023058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive adaptation of signaling pathway","synonyms":[{"name":"positive adaptation of signalling pathway","type":"exact"}],"termid":"GO:0023059"}


id: PBO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family (predicted)","termid":"PBO:0000850"}


id: GO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"ether lipid metabolic process","termid":"GO:0046485"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"platelet activating factor metabolic process","synonyms":[{"name":"PAF metabolic process","type":"exact"},{"name":"PAF metabolism","type":"exact"},{"name":"platelet activating factor metabolism","type":"exact"}],"termid":"GO:0046469"}


id: GO:0038202
data:
  {"annotated_genes":["SJAG_01142","SJAG_03720","SJAG_03405","SJAG_01509","SJAG_01032","SJAG_02426","SJAG_01983","SJAG_01703","SJAG_01187","SJAG_03486","SJAG_00169","SJAG_00875","SJAG_03089","SJAG_03072","SJAG_02723","SJAG_03678","SJAG_05346","SJAG_04235","SJAG_05184","SJAG_03501","SJAG_02765","SJAG_01047","SJAG_00457","SJAG_01320","SJAG_00688","SJAG_00167","SJAG_03371","SJAG_00991","SJAG_00561","SJAG_01184","SJAG_02605","SJAG_03928","SJAG_03799","SJAG_02424","SJAG_04249","SJAG_00209","SJAG_04496","SJAG_04394","SJAG_00824","SJAG_02231","SJAG_03355","SJAG_04910"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88192,89309,94660,102734,102759,109104,110992,113190],"is_not":false,"summary":null,"term":"GO:0038202"},{"annotations":[113108,101206,105342,107034,110056,110644,92202,105754,112199,112556,114268,103478,103227,84163,95666,97544,94972,99103,112306,89424,109236,90278],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[92203,84164,84454,85546,105343,106618,108937,114409,103228,90425,94113],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[88990,101208,111541,113846,103930,90161],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"A series of intracellular molecular signals mediated by TORC1; TOR (target of rapamycin) in complex with at least Raptor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01047":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02605":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04394":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TORC1 signal transduction","type":"exact"}],"termid":"GO:0038202","terms_by_termid":{"GO:0038202":null,"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: PBO:0055758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA p53 regulated and ESC associated 2","termid":"PBO:0055758"}


id: PBO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cek1","termid":"PBO:0005620"}


id: GO:0032731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"positive regulation of interleukin-1 production","termid":"GO:0032732"},{"relation_name":"positively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050718","GO:0050725"],"synonyms":[{"name":"activation of interleukin-1 beta production","type":"narrow"},{"name":"positive regulation of IL-1 beta production","type":"exact"},{"name":"positive regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 beta secretion","type":"narrow"},{"name":"stimulation of interleukin-1 beta production","type":"narrow"},{"name":"up regulation of interleukin-1 beta production","type":"exact"},{"name":"up-regulation of interleukin-1 beta production","type":"exact"},{"name":"upregulation of interleukin-1 beta production","type":"exact"}],"termid":"GO:0032731"}


id: GO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-aspartate + H2O = formate + L-aspartate.","definition_xrefs":["EC:3.5.1.8","MetaCyc:FORMYLASPARTATE-DEFORMYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"formylaspartate deformylase activity","secondary_identifiers":["RHEA:22040"],"synonyms":[{"name":"N-formyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"formylaspartic formylase (formylase I, formylase II)","type":"related"}],"termid":"GO:0047902"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: PBO:0027605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitotic_spindle_assembly","termid":"PBO:0027605"}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_04567","SJAG_02381","SJAG_02426","SJAG_00436","SJAG_04055","SJAG_03949","SJAG_04082","SJAG_04187","SJAG_01186","SJAG_02266","SJAG_03815","SJAG_03319","SJAG_01584","SJAG_04388","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100412,100304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[106079,111558,92583,91798,86924,88188,101354,111559,101069,106080,96629,84975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[112490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PBO:0040000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13A","termid":"PBO:0040000"}


id: PBO:0083044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0083044"}


id: PBO:0062296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 7 pseudogene","termid":"PBO:0062296"}


id: PBO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png3 (predicted)","termid":"PBO:0002095"}


id: PR:O43028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vac8 gene.","definition_xrefs":["UniProtKB:O43028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.14c","synonyms":[{"name":"Spom972h-vac8","type":"exact"}],"termid":"PR:O43028"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["PMID:24625659","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: PBO:0013809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27 (predicted)","termid":"PBO:0013809"}


id: PBO:0067443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 565, pseudogene","termid":"PBO:0067443"}


id: PBO:0048500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase 1","termid":"PBO:0048500"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: GO:0042258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein via L-serinyl molybdopterin guanine dinucleotide.","definition_xrefs":["PMID:8658132","PDB:1EU1","RESID:AA0319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-serinyl molybdopterin guanine dinucleotide","termid":"GO:0042258"}


id: GO:1990451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in the homeostasis of organismal or cellular pH (with pH < 7). pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:go_curators","PMID:10615049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to acidic pH","termid":"GO:0071468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acidic pH","synonyms":[{"name":"cellular stress response to acidity","type":"broad"}],"termid":"GO:1990451"}


id: PBO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 1","termid":"PBO:0048501"}


id: PBO:0059670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 36","termid":"PBO:0059670"}


id: PBO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L39 (predicted)","termid":"PBO:0004164"}


id: GO:0019551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"fumarate metabolic process","termid":"GO:0006106"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process to 2-oxoglutarate","secondary_identifiers":["MetaCyc:GLUTAMATE-DEG1-PWY","MetaCyc:PWY-5766"],"synonyms":[{"name":"glutamate breakdown to 2-oxoglutarate","type":"exact"},{"name":"glutamate catabolic process to 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"glutamate catabolism to 2-ketoglutarate","type":"exact"},{"name":"glutamate catabolism to alpha-ketoglutarate","type":"exact"},{"name":"glutamate catabolism to alpha-oxoglutarate","type":"exact"},{"name":"glutamate degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019551"}


id: GO:0140961
data:
  {"annotated_genes":["SJAG_02599","SJAG_03497","SJAG_01344","SJAG_00988","SJAG_01351","SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104508,93117,89401,93474,114242,93156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of a metal ion.","definition_xrefs":["PMID:26729300","PMID:34442707","PMID:33046888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of metal ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular detoxification of metal cation","type":"exact"}],"termid":"GO:0140961","terms_by_termid":{"GO:0098849":null}}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: PBO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 (gene/pseudogene)","termid":"PBO:0050962"}


id: PBO:0076081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small transmembrane regulator of ion transport 1","termid":"PBO:0076081"}


id: GO:0046072
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP, deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTDP metabolism","type":"exact"}],"termid":"GO:0046072","terms_by_termid":{"GO:0006233":null}}


id: PBO:0090595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere cap complex subunit Ten1","termid":"PBO:0090595"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: PBO:0059468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 6","termid":"PBO:0059468"}


id: GO:0003212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the left cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}


id: PBO:0078684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 17-1","termid":"PBO:0078684"}


id: PBO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 3","termid":"PBO:0044507"}


id: PBO:0084954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-stress response protein; expression is activated by a variety of xenobiotic agents and environmental or physiological stresses; DDR2 has a paralog, HOR7, that arose from the whole genome duplication","termid":"PBO:0084954"}


id: GO:0035556
data:
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id: GO:0050686
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id: PBO:0066469
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id: MOD:01756
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01756"}


id: GO:0008734
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + O2 = iminosuccinate + H2O2. Can also use fumatate as electron acceptor under anaerobic conditions, yielding succinate.","definition_xrefs":["EC:1.4.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-aspartate oxidase activity","synonyms":[{"name":"L-aspartate:oxygen oxidoreductase","type":"related"}],"termid":"GO:0008734"}


id: GO:0098542
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id: PBO:0060297
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id: PBO:0083939
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id: GO:0035976
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id: GO:1905070
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id: GO:0044667
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id: PR:Q9UUA7
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id: PBO:0079724
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id: GO:0050698
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id: PR:Q9US60
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- klp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.07","synonyms":[{"name":"Spom972h-klp3","type":"exact"},{"name":"kinesin-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US60"}


id: PBO:0083603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase","termid":"PBO:0083603"}


id: PBO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoic acid synthetase Lip5","termid":"PBO:0090212"}


id: GO:0008785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alkyl hydroperoxide reductase activity","secondary_identifiers":["Reactome:R-HSA-1222526"],"termid":"GO:0008785"}


id: GO:0042185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:go_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"m-xylene metabolic process","termid":"GO:0018949"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"m-xylene catabolic process","secondary_identifiers":["MetaCyc:PWY-142"],"synonyms":[{"name":"m-xylene breakdown","type":"exact"},{"name":"m-xylene catabolism","type":"exact"},{"name":"m-xylene degradation","type":"exact"},{"name":"meta-xylene catabolic process","type":"exact"},{"name":"meta-xylene catabolism","type":"exact"}],"termid":"GO:0042185"}


id: PBO:0036110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_cable_assembly","termid":"PBO:0036110"}


id: PBO:0002791
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipodystrophy","termid":"PBO:0002791"}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: PBO:0067825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 127","termid":"PBO:0067825"}


id: FYPO:0002455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position or morphology of all or part of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal septum","termid":"FYPO:0004292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal septum during vegetative growth","synonyms":[{"name":"abnormal septum during mitotic cell cycle","type":"related"},{"name":"abnormal septum physical object quality during vegetative growth","type":"exact"}],"termid":"FYPO:0002455"}


id: PBO:0089987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3","termid":"PBO:0089987"}


id: GO:0008395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of a hydroxyl group on a steroid by incorporation of oxygen from O2.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"steroid hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-9035960","Reactome:R-HSA-192123","Reactome:R-HSA-193497","Reactome:R-HSA-9758674","Reactome:R-HSA-191999","Reactome:R-HSA-193737","Reactome:R-HSA-193460","Reactome:R-HSA-193060","Reactome:R-HSA-193143","Reactome:R-HSA-193780","Reactome:R-HSA-6785245","Reactome:R-HSA-192042","Reactome:R-HSA-193713","Reactome:R-HSA-193995","Reactome:R-HSA-193719","GO:0008394","Reactome:R-HSA-6785244","Reactome:R-HSA-193787","Reactome:R-HSA-193965","RHEA:43836","Reactome:R-HSA-193792","Reactome:R-HSA-191983","Reactome:R-HSA-193393","Reactome:R-HSA-5601849","Reactome:R-HSA-5602170","Reactome:R-HSA-192054"],"synonyms":[{"name":"cytochrome P450 CYP2G1","type":"narrow"},{"name":"olfactory-specific steroid hydroxylase activity","type":"narrow"}],"termid":"GO:0008395"}


id: PBO:0041108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 1","termid":"PBO:0041108"}


id: GO:1900267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of substance P receptor binding","termid":"GO:1900265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of substance P receptor binding","synonyms":[{"name":"activation of neurokinin-1 receptor binding","type":"exact"},{"name":"activation of substance P receptor binding","type":"narrow"},{"name":"activation of substance P receptor ligand","type":"narrow"},{"name":"positive regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"positive regulation of substance P receptor ligand","type":"narrow"},{"name":"up regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up regulation of substance P receptor binding","type":"exact"},{"name":"up regulation of substance P receptor ligand","type":"narrow"},{"name":"up-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor ligand","type":"narrow"},{"name":"upregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"upregulation of substance P receptor binding","type":"exact"},{"name":"upregulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900267"}


id: PBO:0005033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase","termid":"PBO:0005033"}


id: MOD:00532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12845591","Unimod:171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shimadzu 13CNBS","synonyms":[{"name":"NBS:13C(6)","type":"related"},{"name":"Shimadzu NBS-13C","type":"related"}],"termid":"MOD:00532"}


id: GO:0060522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range from mesenchymal cells to cells of an epithelium that results in a developmental change in the epithelial cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal to epithelial cell signaling","synonyms":[{"name":"inductive mesenchymal to epithelial cell signalling","type":"exact"}],"termid":"GO:0060522"}


id: GO:0034896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-formiminopyruvate + H2O = 3-formylpyruvate + HN3.","definition_xrefs":["UM-BBD_reactionID:r1400"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-formiminopyruvate hydrolase activity (obsolete GO:0034896)","termid":"GO:0034896"}


id: MOD:01187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with an L-pyrrolysine residue, a natural pretranslational modification.","definition_xrefs":["PubMed:15314242","PubMed:16096277","RESID:AA0321","ChEBI:21860","PubMed:12029132","Unimod:435","PubMed:11435424","PubMed:12029131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pyrrolysine residue","synonyms":[{"name":"(2S)-2-amino-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]aminohexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-ylcarbonyl]azanylhexanoic acid","type":"exact"},{"name":"L-pyrrolysine","type":"exact"},{"name":"N6-(4-methyl-1,2-didehydropyrrolidine-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-(4-methyl-delta-1-pyrroline-5-carboxyl)-L-lysine","type":"exact"},{"name":"N6-([(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl)-L-lysine","type":"exact"},{"name":"NON_STD Pyrrolysine","type":"exact"},{"name":"Pyl","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct","type":"exact"}],"termid":"MOD:01187"}


id: PBO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 3","termid":"PBO:0048752"}


id: PATO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbranched","termid":"PATO:0000414"}


id: PBO:0045871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 4","termid":"PBO:0045871"}


id: GO:2000558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immunoglobulin production in mucosal tissue.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production in mucosal tissue","termid":"GO:2000557"},{"relation_name":"positively_regulates","term_name":"immunoglobulin production in mucosal tissue","termid":"GO:0002426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of immunoglobulin production in mucosal tissue","synonyms":[{"name":"positive regulation of antibody production in mucosal tissue","type":"exact"}],"termid":"GO:2000558"}


id: PBO:0049031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 18","termid":"PBO:0049031"}


id: GO:0007426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The projection of branches of an open tracheal system towards their target tissues. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal outgrowth, open tracheal system","termid":"GO:0007426"}


id: PBO:0052202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ1 antisense RNA 1","termid":"PBO:0052202"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:cjm","GOC:mtg_cardio","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: FYPO:0003516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased L-ergothioneine level during vegetative growth","type":"exact"},{"name":"increased cellular L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003516"}


id: GO:0098767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis II.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis II M phase (obsolete GO:0098767)","termid":"GO:0098767"}


id: PBO:0084984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-cytochrome P450 reductase; involved in ergosterol biosynthesis; associated and coordinately regulated with Erg11p","termid":"PBO:0084984"}


id: GO:1904636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:17516843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionomycin","termid":"GO:1904636"}


id: FYPO:0004950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus is longer than normal and undergoes oscillatory movement.","definition_xrefs":["PMID:16611238","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated vegetative cell with oscillating nucleus","termid":"FYPO:0005002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"elongated vegetative cell with elongated oscillating nucleus","synonyms":[{"name":"elongated cell with elongated oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with elongated oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004950"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0057941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3666","termid":"PBO:0057941"}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: FYPO:0002308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of IMP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal IMP binding","termid":"FYPO:0002308"}


id: PBO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 2","termid":"PBO:0044221"}


id: PBO:0011496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, methyltransferase (predicted)","termid":"PBO:0011496"}


id: PBO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 24","termid":"PBO:0071886"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: PBO:0004211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Rum1","termid":"PBO:0004211"}


id: GO:0008968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sedoheptulose-7-phosphate = D-alpha,beta-D-heptose 7-phosphate.","definition_xrefs":["MetaCyc:RXN0-4301","PMID:11279237","PMID:8631969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-sedoheptulose 7-phosphate isomerase activity","secondary_identifiers":["RHEA:27489"],"synonyms":[{"name":"phosphoheptose isomerase activity","type":"exact"}],"termid":"GO:0008968"}


id: PBO:0072931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 11","termid":"PBO:0072931"}


id: PBO:0085903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in responding to conditions of stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0085903"}


id: FYPO:0005960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a mitotic spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PomBase:mah","PMID:15797925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"multipolar spindle","termid":"FYPO:0005959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0000120","FYPO:0002399","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multipolar mitotic spindle","synonyms":[{"name":"multipolar spindle during mitosis","type":"exact"},{"name":"multipolar spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0005960"}


id: PBO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitosis","termid":"PBO:0035736"}


id: GO:0033247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"regulates","term_name":"penicillin catabolic process","termid":"GO:0042317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of penicillin catabolic process","synonyms":[{"name":"regulation of penicillin breakdown","type":"exact"},{"name":"regulation of penicillin catabolism","type":"exact"},{"name":"regulation of penicillin degradation","type":"exact"}],"termid":"GO:0033247"}


id: PBO:0001443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uridine) methyltransferase Trm9 (predicted)","termid":"PBO:0001443"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: MOD:00579
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propionaldehyde +40","synonyms":[{"name":"Delta:H(4)C(3)","type":"related"},{"name":"Propionaldehyde +40","type":"related"}],"termid":"MOD:00579"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: FYPO:0002987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, contains two nuclei, has a larger diameter and volume than normal, and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"swollen multinucleate vegetative cell","termid":"FYPO:0004257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, swollen binucleate cell with central constriction","secondary_identifiers":["FYPO:0003288"],"synonyms":[{"name":"inviable after spore germination, binucleate without cell division, swollen cell with central constriction","type":"exact"},{"name":"inviable after spore germination, undivided swollen binucleate cell with central constriction","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate cell with constricted region at cell division site","type":"exact"},{"name":"inviable after spore germination, without cell division, swollen binucleate dumbbell-shaped cell","type":"related"},{"name":"inviable after spore germination, without cell division, swollen multinucleate cell with central constriction","type":"related"},{"name":"inviable following spore germination, without cell division, swollen binucleate cell with central constriction","type":"exact"},{"name":"inviable germinated spore, without cell division, swollen binucleate cell with central constriction","type":"exact"},{"name":"lethal after spore germination, without cell division, swollen binucleate cell with central constriction","type":"exact"}],"termid":"FYPO:0002987"}


id: GO:0072703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methyl methanesulfonate (MMS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methyl methanesulfonate","termid":"GO:0072702"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methyl methanesulfonate","synonyms":[{"name":"cellular response to MMS","type":"exact"}],"termid":"GO:0072703"}


id: PBO:0034531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_nucleus_and_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034531"}


id: SO:0001644
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An engineered vector that is able to take part in homologous recombination in a host with the intent of introducing site specific genomic modifications.","definition_xrefs":["MGD:tm","PMID:10354467"],"direct_ancestors":[{"relation_name":"has_part","term_name":"homologous_region","termid":"SO:0000853"},{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targeting_vector","synonyms":[{"name":"targeting vector","type":"related"}],"termid":"SO:0001644"}


id: PBO:0080723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 antisense RNA","termid":"PBO:0080723"}


id: GO:0004820
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93114],"is_not":false,"summary":null,"term":"GO:0004820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).","definition_xrefs":["EC:6.1.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0140098","GO:0016874"],"is_obsolete":false,"name":"glycine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:16013","MetaCyc:GLYCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380240","Reactome:R-HSA-380048"],"synonyms":[{"name":"glycine:tRNAGly ligase (AMP-forming) activity","type":"related"},{"name":"glycyl translase activity","type":"related"},{"name":"glycyl-tRNA synthetase activity","type":"exact"},{"name":"glycyl-transfer RNA synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"glycyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004820","terms_by_termid":{"GO:0004820":null}}


id: PBO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene","termid":"PBO:0045218"}


id: PBO:0075233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6","termid":"PBO:0075233"}


id: GO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene disulfonate 1,2-dioxygenase activity (obsolete GO:0018689)","synonyms":[{"name":"naphthalene disulphonate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018689"}


id: FYPO:0001086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}


id: PBO:0085489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source","termid":"PBO:0085489"}


id: GO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + UDP-D-galactose = 3-[alpha-D-galactosyl-(1->6)-beta-D-galactosyl]-1,2-diacyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.241","RHEA:10520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"digalactosyldiacylglycerol synthase activity","secondary_identifiers":["KEGG_REACTION:R04469","Wikipedia:Digalactosyldiacylglycerol_synthase","MetaCyc:RXN-1225"],"synonyms":[{"name":"DGD1","type":"narrow"},{"name":"DGD2","type":"narrow"},{"name":"DGDG synthase activity","type":"broad"},{"name":"UDP-galactose-dependent DGDG synthase activity","type":"related"},{"name":"UDP-galactose-dependent digalactosyldiacylglycerol synthase activity","type":"related"},{"name":"UDP-galactose:3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol 6-alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:MGDG galactosyltransferase activity","type":"exact"}],"termid":"GO:0046481"}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: PBO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 30","termid":"PBO:0052738"}


id: GO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the left horn of the sinus venosus from its initial formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left horn of sinus venosus development","termid":"GO:0061079"}


id: FYPO:0007800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present at the cell surface instead.","definition_xrefs":["PomBase:mah","PMID:33536395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"},{"relation_name":"is_a","term_name":"protein mislocalized to cell surface during vegetative growth","termid":"FYPO:0007799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface","synonyms":[{"name":"abolished luminal ER protein retention","type":"exact"},{"name":"abolished protein localization to ER, with protein mislocalized to cell surface","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0007800"}


id: PBO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 43","termid":"PBO:0052675"}


id: FYPO:0009046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of phloxine B and hydrogen peroxide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phloxine B and hydrogen peroxide","synonyms":[{"name":"resistance to phloxine B and hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to phloxine B and hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistance to phloxine B and hydrogen peroxide in combination","type":"exact"},{"name":"resistant to phloxine B and hydrogen peroxide","type":"exact"}],"termid":"FYPO:0009046"}


id: PBO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, predicted helix turn helix","termid":"PBO:0011459"}


id: GO:0102378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolmonoside + UDP-alpha-D-glucose = rubusoside + UDP.","definition_xrefs":["RHEA:61736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"steviolmonoside glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13512"],"termid":"GO:0102378"}


id: PBO:0035755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_medial_membrane_band_assembly","termid":"PBO:0035755"}


id: PBO:0070814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 44","termid":"PBO:0070814"}


id: GO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indolebutyric acid metabolic process","synonyms":[{"name":"IBA metabolic process","type":"exact"},{"name":"IBA metabolism","type":"exact"},{"name":"indole-3-butyric acid metabolic process","type":"narrow"}],"termid":"GO:0080024"}


id: GO:0042884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin, a class of glycine-rich, bactericidal peptides (antibiotics) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:11292337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"microcin transport","termid":"GO:0042884"}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: GO:0019755
data:
  {"annotated_genes":["SJAG_04731","SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"},{"annotations":[103159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of one-carbon compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02125":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"one-carbon compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"one carbon compound transport","type":"exact"}],"termid":"GO:0019755","terms_by_termid":{"GO:0071918":null,"GO:0072489":null}}


id: PBO:0075988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starch binding domain 1","termid":"PBO:0075988"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: GO:0009651
data:
  {"annotated_genes":["SJAG_00661","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[96267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to ionic osmotic stress","type":"exact"},{"name":"salinity response","type":"exact"}],"termid":"GO:0009651","terms_by_termid":{"GO:0071472":null,"GO:0071473":null}}


id: PR:P87129
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 53 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00585","PANTHER:PTHR12820:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 53 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.15","secondary_identifiers":["UniProtKB:P87129"],"synonyms":[{"name":"GARP complex subunit vps53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS53","type":"exact"}],"termid":"PR:P87129"}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: PBO:0083295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene PNO1/YOR145C","termid":"PBO:0083295"}


id: GO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a collagen and cuticulin-based cuticle. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of collagen and cuticulin-based cuticle","synonyms":[{"name":"structural constituent of cuticle","type":"broad"}],"termid":"GO:0042329"}


id: PBO:0042515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing p53 target 1","termid":"PBO:0042515"}


id: PBO:0065791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1 like","termid":"PBO:0065791"}


id: PBO:0074929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96B","termid":"PBO:0074929"}


id: GO:0048665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate specification","termid":"GO:0048665"}


id: GO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a glycosylsphingolipidinositol (GSI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The sphingolipid group is linked, via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via a ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GSI anchors have variants on this canonical linkage.","definition_xrefs":["GOC:jsg","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"GSI anchor metabolic process","termid":"GO:0042081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0042158"],"is_obsolete":false,"name":"GSI anchor biosynthetic process","synonyms":[{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"GSI anchor anabolism","type":"exact"},{"name":"GSI anchor biosynthesis","type":"exact"},{"name":"GSI anchor formation","type":"exact"},{"name":"GSI anchor synthesis","type":"exact"}],"termid":"GO:0042082"}


id: GO:0046080
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dUTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUTP metabolism","type":"exact"}],"termid":"GO:0046080","terms_by_termid":{"GO:0046081":null}}


id: PBO:0014274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0014274"}


id: GO:1990965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytosylglucuronic acid + H+ = cytosylarabinopyranose + CO2.","definition_xrefs":["GOC:tb","GOC:pr","PMID:23874663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cytosylglucuronate decarboxylase activity","termid":"GO:1990965"}


id: GO:0019043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host, either as an integrated provirus within the host genome or as an episome, where viral genome remains in the cytoplasm or nucleus as distinct objects.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of viral latency","secondary_identifiers":["GO:0075601"],"synonyms":[{"name":"lysogenic commitment","type":"exact"},{"name":"phage lysogeny","type":"narrow"}],"termid":"GO:0019043"}


id: PBO:0046846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7 pseudogene 1","termid":"PBO:0046846"}


id: GO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:bc","PMID:20005821","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of astrocyte differentiation","termid":"GO:0048712"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of astrocyte activation","termid":"GO:0061888"},{"relation_name":"is_a","term_name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"},{"relation_name":"negatively_regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte activation","termid":"GO:0061889"}


id: PBO:0077959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-3","termid":"PBO:0077959"}


id: PBO:0058930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7i","termid":"PBO:0058930"}


id: PBO:0050775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histatin 3","termid":"PBO:0050775"}


id: PBO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex ERCC-3 subunit","termid":"PBO:0001167"}


id: PBO:0080457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2B","termid":"PBO:0080457"}


id: GO:0050394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + viomycin = ADP + O-phosphoviomycin.","definition_xrefs":["EC:2.7.1.103","MetaCyc:VIOMYCIN-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"viomycin kinase activity","secondary_identifiers":["RHEA:20509"],"synonyms":[{"name":"ATP:viomycin O-phosphotransferase activity","type":"related"},{"name":"capreomycin phosphotransferase activity","type":"related"},{"name":"viomycin phosphotransferase activity","type":"related"}],"termid":"GO:0050394"}


id: PBO:0003193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein Apq12 (predicted)","termid":"PBO:0003193"}


id: GO:0035636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information between living organisms.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism signaling (obsolete GO:0035636)","synonyms":[{"name":"multi-organism signalling","type":"exact"},{"name":"pheromone signaling","type":"narrow"},{"name":"signaling between organisms","type":"exact"},{"name":"signaling with other organism","type":"exact"}],"termid":"GO:0035636"}


id: GO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which signal anchor sequences function as both ER signal sequences and membrane anchor sequences.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into ER membrane by internal uncleaved signal-anchor sequence","synonyms":[{"name":"internal uncleaved signal-anchor sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, internal uncleaved signal-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-ER insertion by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by internal uncleaved signal-anchor sequence","type":"exact"}],"termid":"GO:0045051"}


id: PBO:0048818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 1","termid":"PBO:0048818"}


id: PBO:0080459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2 like","termid":"PBO:0080459"}


id: PBO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Dbl2","termid":"PBO:0013121"}


id: FYPO:0006643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles and elongates during prophase, but does not elongate further and eventually collapses during metaphase.","definition_xrefs":["PMID:28178520","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during metaphase","synonyms":[{"name":"broken mitotic spindle without elongation during metaphase","type":"related"},{"name":"mitotic spindle breakage without elongation during metaphase","type":"exact"},{"name":"mitotic spindle collapse without elongation during metaphase during vegetative growth","type":"exact"},{"name":"mitotic spindle collapse without extension during metaphase","type":"exact"},{"name":"spindle collapse without elongation during metaphase during mitotic cell cycle","type":"related"},{"name":"spindle collapse without elongation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006643"}


id: PR:O74857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13408:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.07","secondary_identifiers":["UniProtKB:O74857"],"synonyms":[{"name":"RNA polymerase III subunit C4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C53 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC18.07","type":"related"},{"name":"Spom972h-POLR3D","type":"exact"},{"name":"rpc4","type":"related"}],"termid":"PR:O74857"}


id: GO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of smooth muscle fiber over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid","GOC:mtg_muscle"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth muscle fiber development (obsolete GO:0048746)","synonyms":[{"name":"smooth muscle fiber development","type":"exact"},{"name":"smooth muscle fibre development","type":"exact"}],"termid":"GO:0048746"}


id: GO:1904906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:BHF","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","PMID:19460962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"positively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"activation of endothelial cell-matrix adhesion via fibronectin","type":"narrow"},{"name":"up regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"up-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"upregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"}],"termid":"GO:1904906"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[115502,115194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115595,115474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["GO:1903475","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0004803","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: PBO:0076261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small VCP interacting protein","termid":"PBO:0076261"}


id: GO:0030715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in volume of an oocyte during the growth phase of the egg chamber, once the egg chamber has left the germarium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte growth","termid":"GO:0001555"},{"relation_name":"part_of","term_name":"growth of a germarium-derived egg chamber","termid":"GO:0007295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth in germarium-derived egg chamber","termid":"GO:0030715"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: PBO:0066796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 95","termid":"PBO:0066796"}


id: PBO:0058003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-2","termid":"PBO:0058003"}


id: GO:0103089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(6'-methylthio)hexylmalate = 3-(6'-methylthio)hexylmalate.","definition_xrefs":["GOC:pz","EC:5.4.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylthiohexylmalate isomerase activity","secondary_identifiers":["MetaCyc:RXNQT-4173"],"termid":"GO:0103089"}


id: PBO:0067204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 269, pseudogene","termid":"PBO:0067204"}


id: PBO:0072137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 14","termid":"PBO:0072137"}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistant to thiabendazole","type":"exact"},{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"}],"termid":"FYPO:0000069"}


id: PBO:0075882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL6 antisense RNA 1","termid":"PBO:0075882"}


id: PBO:0061691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210","termid":"PBO:0061691"}


id: PBO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 1","termid":"PBO:0047605"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: GO:0016474
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sodium ion-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of sodium ions across a concentration gradient. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis.","definition_xrefs":["PMID:15802565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion-transporting two-sector ATPase complex","termid":"GO:0016472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium ion-transporting V-type ATPase complex","synonyms":[{"name":"sodium-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016474"}


id: FYPO:0004301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["GO:0051306","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic chromosome separation","type":"exact"},{"name":"normal mitotic sister chromatid disjunction","type":"related"},{"name":"normal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004301"}


id: FYPO:0001123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated spore","synonyms":[{"name":"long spores","type":"exact"}],"termid":"FYPO:0001123"}


id: PBO:0048027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen silencer binding protein","termid":"PBO:0048027"}


id: PBO:0055935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 41","termid":"PBO:0055935"}


id: FYPO:0003234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at HOOD during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003234"}


id: FYPO:0009030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of amitrole than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to amitrole","synonyms":[{"name":"resistance to amitrole during mitotic cell cycle","type":"related"},{"name":"resistance to amitrole during vegetative growth","type":"exact"},{"name":"resistant to amitrole","type":"exact"}],"termid":"FYPO:0009030"}


id: GO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication by electrical coupling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication by electrical coupling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086044"}


id: PBO:0001854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein Mug20","termid":"PBO:0001854"}


id: GO:0004073
data:
  {"annotated_genes":["SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111850],"is_not":false,"summary":null,"term":"GO:0004073"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate 4-semialdehyde + NADP+ + phosphate = 4-phospho-L-aspartate + H+ + NADPH.","definition_xrefs":["EC:1.2.1.11","RHEA:24284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aspartate-semialdehyde dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02291","MetaCyc:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"ASA dehydrogenase activity","type":"related"},{"name":"L-aspartate-4-semialdehyde:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"L-aspartate-beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"L-aspartate-beta-semialdehyde:NADP oxidoreductase (phosporylating)","type":"related"},{"name":"aspartate semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic beta-semialdehyde dehydrogenase activity","type":"related"},{"name":"aspartic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004073","terms_by_termid":{"GO:0004073":null}}


id: PBO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.-","termid":"PBO:0002237"}


id: PBO:0005261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication checkpoint kinase Cds1","termid":"PBO:0005261"}


id: PBO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5 (predicted)","termid":"PBO:0002282"}


id: PBO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle regulated","termid":"PBO:0001403"}


id: PBO:0027023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization,_with_protein_distributed_in_nucleus","termid":"PBO:0027023"}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: PBO:0080328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 92 pseudogene","termid":"PBO:0080328"}


id: PBO:0069689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 968, pseudogene","termid":"PBO:0069689"}


id: GO:0099638
data:
  {"annotated_genes":["SJAG_00379","SJAG_02912","SJAG_02177","SJAG_02282","SJAG_01809","SJAG_03915","SJAG_04609","SJAG_03756","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87396,88383,91000,97227,103447,108861,109084,114542,114922],"is_not":false,"summary":null,"term":"GO:0099638"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02912":null,"SJAG_03756":null,"SJAG_03915":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endosome to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099638","terms_by_termid":{"GO:0099638":null}}


id: PBO:0080008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 3","termid":"PBO:0080008"}


id: PBO:0049005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled estrogen receptor 1","termid":"PBO:0049005"}


id: MOD:01859
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form 4-amino-3-isothiazolidinone-L-phenylalanine.","definition_xrefs":["RESID:AA0562","PubMed:17502599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-3-isothiazolidinone-L-phenylalanine","synonyms":[{"name":"(2S)-2-[(4R)-4-amino-3-oxo-1,2-thiazolidin-2-yl]-3-phenylpropanoic acid","type":"exact"},{"name":"2-(4-amino-3-oxo-isothiazolidin-2-yl)-3-phenylpropanoic acid","type":"exact"},{"name":"4-amino-3-isothiazolidinone-L-phenylalanine","type":"exact"},{"name":"CROSSLNK N,N-(cysteine-1,S-diyl)phenylalanine (Cys-Phe)","type":"exact"},{"name":"N,N-(L-cysteine-1,S-diyl)-L-phenylalanine","type":"exact"},{"name":"cysteinyl phenylalanine sulfenamide","type":"exact"},{"name":"phenylalanine-cysteine sulfenyl amide cross-link","type":"exact"},{"name":"phenylalanine-cysteine sulphenyl amide cross-link","type":"exact"}],"termid":"MOD:01859"}


id: GO:0046486
data:
  {"annotated_genes":["SJAG_03506","SJAG_04628","SJAG_03609","SJAG_02763","SJAG_03292","SJAG_03604","SJAG_04545","SJAG_03524","SJAG_04007","SJAG_02543","SJAG_04323","SJAG_04110","SJAG_02093","SJAG_00068","SJAG_05327","SJAG_03162","SJAG_01227","SJAG_01957","SJAG_01148","SJAG_03076","SJAG_01863","SJAG_01416","SJAG_00846","SJAG_02980","SJAG_02487","SJAG_02913","SJAG_03066","SJAG_03375","SJAG_00622","SJAG_04319","SJAG_00946","SJAG_01036","SJAG_00168","SJAG_04041","SJAG_01860","SJAG_03204","SJAG_03801","SJAG_04119","SJAG_02289","SJAG_06425","SJAG_04975","SJAG_00812","SJAG_05219","SJAG_02804","SJAG_02100","SJAG_04881","SJAG_03700","SJAG_03115","SJAG_03878","SJAG_01918","SJAG_04883","SJAG_00638","SJAG_05330","SJAG_02523","SJAG_02091","SJAG_03935","SJAG_03154","SJAG_04337","SJAG_00831","SJAG_02902","SJAG_00296","SJAG_02683","SJAG_00114","SJAG_03672","SJAG_03563","SJAG_00825","SJAG_02321","SJAG_05278","SJAG_02903","SJAG_00063","SJAG_01570","SJAG_01571","SJAG_00295","SJAG_00999","SJAG_02488","SJAG_04537","SJAG_02328","SJAG_02776","SJAG_02161","SJAG_00426","SJAG_04165","SJAG_04930","SJAG_01236","SJAG_01519","SJAG_04924","SJAG_04792","SJAG_01233","SJAG_02907","SJAG_04317","SJAG_02089","SJAG_06383","SJAG_01876","SJAG_02665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046464"},{"annotations":[110020,99808,88326,83580,87502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[103552,95840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035965"},{"annotations":[89133,102280,109097,113899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[84938,105360,108061,60953,111816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[115397,109098,99096,110742,102281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[108136,110255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[70352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[86241,87982,93872,96912,87990,99070,97610,110823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[85677,87329,85059,96322,94965,96388,89179,97698,99871,103630,102796,99133,104661,112204,113295,108434,110853,84792,94208,106004,90618,94758,89089,92527,107675,111279,89633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[89150,92032,90137,105992,95843,87281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[92516,100428,103473,105361,89151,90757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[113043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[110745,85511,100429,90758,114507,92517,84939,100072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[106606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036149"},{"annotations":[88723,88247,113072,114860,103370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[109631,104372,106066,92033,97048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046488"},{"annotations":[87942,92802,89315,114508,87323,107205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[83873,61006,61233,93696,62581,107241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[110746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[90026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[110747,97507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"},{"annotations":[108139,110258,87566,86157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[87995,90138,113634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[87996,110859,86235,89772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerolipids, any lipid with a glycerol backbone. 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id: PBO:0049349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 7","termid":"PBO:0049349"}


id: PBO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A9","termid":"PBO:0061322"}


id: GO:0120332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells, such as the bacteria, in the mouth.","definition_xrefs":["PMID:31882545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of oral microbiota composition","synonyms":[{"name":"host-induced regulation of oral microbiota composition","type":"related"}],"termid":"GO:0120332"}


id: GO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tocopherol + O2 + NADPH + H+ = 13'-hydroxy-tocopherol + NADP+ + H2O .","definition_xrefs":["MetaCyc:RXN-11003"],"gene_count":0,"genotype_count":0,"name":"obsolete tocopherol omega-hydroxylase activity (obsolete GO:0052870)","synonyms":[{"name":"tocopherol 13-hydroxylase activity","type":"exact"}],"termid":"GO:0052870"}


id: GO:0016500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a protein hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"protein-hormone receptor activity","termid":"GO:0016500"}


id: GO:0009508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing plastid encoded genes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"plastid nucleoid","termid":"GO:0042646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005694","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid chromosome","termid":"GO:0009508"}


id: PATO:0000360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000360 consistency value (obsolete PATO:0000360)","termid":"PATO:0000360"}


id: GO:0006169
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112909],"is_not":false,"summary":null,"term":"GO:0006169"}]},"cv_name":"biological_process","definition":"Any process that generates adenosine, adenine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside salvage","termid":"GO:0006166"},{"relation_name":"is_a","term_name":"adenosine biosynthetic process","termid":"GO:0046086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"adenosine salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006169","terms_by_termid":{"GO:0006169":null}}


id: GO:0004556
data:
  {"annotated_genes":["SJAG_01029","SJAG_00096","SJAG_04238","SJAG_02435","SJAG_04789","SJAG_00485"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90157,90944,91323,100096,110072,113833,114379],"is_not":false,"summary":null,"term":"GO:0004556"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more alpha-(1->4)-linked D-glucose units.","definition_xrefs":["PMID:12527308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase activity","termid":"GO:0016160"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00485":null,"SJAG_01029":null,"SJAG_02435":null,"SJAG_04238":null,"SJAG_04789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha-amylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ALPHA-AMYL-RXN","Reactome:R-HSA-191114","MetaCyc:RXN-1823","GO:0103025","EC:3.2.1.1","MetaCyc:RXN-1825","Reactome:R-HSA-188979"],"synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase activity","type":"related"},{"name":"alpha amylase activity","type":"related"},{"name":"alpha-amylase activity (releasing maltohexaose)","type":"narrow"},{"name":"endoamylase activity","type":"related"},{"name":"glycogenase activity","type":"broad"},{"name":"taka-amylase A","type":"related"}],"termid":"GO:0004556","terms_by_termid":{"GO:0004556":null}}


id: PBO:0086841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with similarity to asparagine synthetases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YML096W is not an essential gene and partially overlaps the verified gene RAD10","termid":"PBO:0086841"}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: PR:O59858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione peroxidase 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.03c","secondary_identifiers":["UniProtKB:O59858"],"synonyms":[{"name":"Spom972h-GPX8","type":"exact"}],"termid":"PR:O59858"}


id: SO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where overall coverage represents at least 90 percent of the genome.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_quality_draft","synonyms":[{"name":"high quality draft","type":"exact"}],"termid":"SO:0001487"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: GO:0006007
data:
  {"annotated_genes":["SJAG_03828","SJAG_04192","SJAG_02135","SJAG_00027","SJAG_03373","SJAG_00461","SJAG_01310","SJAG_00839","SJAG_02796","SJAG_02945","SJAG_04495","SJAG_00605","SJAG_02009","SJAG_02107","SJAG_03660","SJAG_02369","SJAG_06622","SJAG_06621","SJAG_04334","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112424,91120,105472,105473,105470,105471,94100,105003,101533,105006,90630,99484,100553,101897,101532,105005,101534,105008,94370,105004,101896,99742,105009,105007,105467,105468,105469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glucose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose breakdown","type":"exact"},{"name":"glucose catabolism","type":"exact"},{"name":"glucose degradation","type":"exact"}],"termid":"GO:0006007","terms_by_termid":{"GO:0061621":null}}


id: GO:0007220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of successive proteolytic cleavages of the Notch protein, which result in an active form of the receptor.","definition_xrefs":["PMID:14986688","PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Notch receptor processing","synonyms":[{"name":"N receptor processing","type":"exact"}],"termid":"GO:0007220"}


id: PBO:0082735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for its structural integrity and catalytic activity, involved in transcriptional silencing and required for sporulation; relocalizes to the cytosol in response to hypoxia; cells defective in SDS3 display pleiotropic phenotypes","termid":"PBO:0082735"}


id: GO:0005724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Heterochromatic regions of the chromosome found at the telomeres of a chromosome in the nucleus.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear telomeric heterochromatin (obsolete GO:0005724)","termid":"GO:0005724"}


id: GO:0031110
data:
  {"annotated_genes":["SJAG_02045","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87495],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[97943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: FYPO:0004230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to UV","synonyms":[{"name":"normal protein phosphorylation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to ultraviolet light","type":"related"}],"termid":"FYPO:0004230"}


id: GO:0099544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The extracellular region immediately adjacent to to a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"perisynaptic space","synonyms":[{"name":"extrasynaptic space","type":"exact"}],"termid":"GO:0099544"}


id: GO:0110112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lipid transporter activity.","definition_xrefs":["GOC:BHF_miRNA","PMID:27365390","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid transporter activity","termid":"GO:0110112"}


id: GO:0046980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules.","definition_xrefs":["PMID:12594855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"tapasin binding","synonyms":[{"name":"TAP binding protein binding","type":"exact"},{"name":"TAPBP binding","type":"related"}],"termid":"GO:0046980"}


id: GO:0010032
data:
  {"annotated_genes":["SJAG_03161"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108124],"is_not":false,"summary":null,"term":"GO:0010032"}]},"cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03161":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032","terms_by_termid":{"GO:0010032":null}}


id: FYPO:0001559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methionine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal methionine import","synonyms":[{"name":"normal L-methionine import","type":"exact"},{"name":"normal L-methionine import across plasma membrane","type":"exact"},{"name":"normal methionine import during mitotic cell cycle","type":"related"},{"name":"normal methionine import during vegetative growth","type":"exact"},{"name":"normal methionine import into cell","type":"exact"},{"name":"normal methionine uptake","type":"exact"}],"termid":"FYPO:0001559"}


id: PATO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, triangular.","direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtriangular","termid":"PATO:0002230"}


id: FYPO:0007639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA damage measured at ribosomal DNA in a cell is greater than normal during G0 phase. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PMID:27738016","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at rDNA during G0","synonyms":[{"name":"increased DNA damage at rDNA during cell quiescence","type":"exact"},{"name":"increased DNA damage at rDNA during quiescence","type":"exact"},{"name":"increased DNA damage at ribosomal DNA","type":"exact"}],"termid":"FYPO:0007639"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: PBO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit (predicted)","termid":"PBO:0002599"}


id: PBO:0027387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_stationary_phase","termid":"PBO:0027387"}


id: GO:0080147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a root hair cell over time, from its formation to the mature state.","definition_xrefs":["PMID:19675148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"root hair cell differentiation","termid":"GO:0048765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell development","termid":"GO:0080147"}


id: GO:0052929
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69373,113973],"is_not":false,"summary":null,"term":"GO:0052929"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA with a 3' CC end + ATP = a tRNA with a 3' CCA end + diphosphate.","definition_xrefs":["PMID:33095240","RHEA:60012","PMID:31936900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016779","GO:0140098","GO:0003824","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R09386"],"synonyms":[{"name":"ATP:3'-CC-tRNA adenylyltransferase activity","type":"exact"},{"name":"ATP:tRNA adenylyltransferase activity","type":"broad"}],"termid":"GO:0052929","terms_by_termid":{"GO:0052929":null}}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: GO:0060079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane potential","termid":"GO:0060078"},{"relation_name":"part_of","term_name":"chemical synaptic transmission, postsynaptic","termid":"GO:0099565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"excitatory postsynaptic potential","synonyms":[{"name":"regulation of EPSP","type":"related"},{"name":"regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060079"}


id: FYPO:0002460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"viable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002477"],"synonyms":[{"name":"viable branched curved cell","type":"exact"},{"name":"viable branched, curved cell during vegetative growth","type":"exact"},{"name":"viable branched, curved septated cell","type":"exact"},{"name":"viable branched, curved vegetative cell","type":"exact"},{"name":"viable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, curved septated cell","type":"exact"},{"name":"viable branched, long, curved, septated cell","type":"exact"},{"name":"viable curved branched cell","type":"exact"},{"name":"viable elongated branched curved cell","type":"exact"}],"termid":"FYPO:0002460"}


id: GO:0033459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GAA codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033459"}


id: GO:0061210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mesonephros over time, from its formation to the mature organ.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in kidney development","termid":"GO:0060995"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in mesonephros development","synonyms":[{"name":"cell-cell signalling involved in mesonephros development","type":"exact"}],"termid":"GO:0061210"}


id: FYPO:0002722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular phytochelatin level","termid":"FYPO:0002829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"phytochelatin absent from cell","synonyms":[{"name":"cadystin absent from cell","type":"exact"},{"name":"phytochelatin absent from cell during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002722"}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000298","FYPO:0000661","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: GO:0007489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of the differentiation of polytenized larval hypodermal cells from abdominal histoblasts. The abdominal histoblasts remain a small cluster of diploid cells among the polytenized larval hypodermal cells.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of imaginal histoblast diploidy","termid":"GO:0007489"}


id: PBO:0053400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 330","termid":"PBO:0053400"}


id: PBO:0064717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 53","termid":"PBO:0064717"}


id: GO:0005055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity.","definition_xrefs":["PMID:2970671","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674","GO:0098631"],"is_obsolete":false,"name":"laminin receptor activity","termid":"GO:0005055"}


