# terms

id: PR:O42839
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13260:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.01c","secondary_identifiers":["UniProtKB:O42839"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC19G12.01c","type":"related"},{"name":"Spom972h-ANAPC4","type":"exact"},{"name":"apc4","type":"related"},{"name":"cell untimely torn protein 20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid1","type":"related"}],"termid":"PR:O42839"}


id: PBO:0028456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_assembly","termid":"PBO:0028456"}


id: GO:0039548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of host IRF3 (interferon regulatory factor-3). IRF3 is a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF3, which allows IRF3 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.","definition_xrefs":["PMID:21632562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity","secondary_identifiers":["VZ:757"],"synonyms":[{"name":"inhibition of IRF3-dependent antiviral response","type":"related"},{"name":"inhibition of host IRF3 by virus","type":"related"},{"name":"suppression by virus of host IRF3 activity","type":"related"},{"name":"suppression by virus of host interferon regulatory factor 3","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity","type":"narrow"}],"termid":"GO:0039548"}


id: PBO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2 (predicted)","termid":"PBO:0004955"}


id: PBO:0066564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 3","termid":"PBO:0066564"}


id: PBO:0048061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 10","termid":"PBO:0048061"}


id: PBO:0046538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 1","termid":"PBO:0046538"}


id: PBO:0110988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, DUF34 family, possible chaperone or insertase (PMID: 34572495)","termid":"PBO:0110988"}


id: PBO:0038589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 8","termid":"PBO:0038589"}


id: GO:0004905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a type I interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:16681834","GOC:add","GOC:signaling","PMID:15546383","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon receptor activity","termid":"GO:0004904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"type I interferon receptor activity","synonyms":[{"name":"interferon-alpha receptor activity","type":"narrow"},{"name":"interferon-alpha/beta receptor activity","type":"narrow"},{"name":"interferon-beta receptor activity","type":"narrow"},{"name":"interferon-delta receptor activity","type":"narrow"},{"name":"interferon-epsilon receptor activity","type":"narrow"},{"name":"interferon-kappa receptor activity","type":"narrow"},{"name":"interferon-omega receptor activity","type":"narrow"},{"name":"interferon-tau receptor activity","type":"narrow"},{"name":"interferon-zeta receptor activity","type":"narrow"},{"name":"type I IFN receptor activity","type":"exact"}],"termid":"GO:0004905"}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: PATO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated green","synonyms":[{"name":"bright green","type":"related"}],"termid":"PATO:0001271"}


id: PR:O42978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR20971:SF0","OMA:SCHPO03650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.09","secondary_identifiers":["UniProtKB:O42978"],"synonyms":[{"name":"Spom972h-LSM5","type":"exact"}],"termid":"PR:O42978"}


id: GO:0141147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when calcium ions bind on the intracellular side of the channel complex or one of its constituent parts.","definition_xrefs":["PMID:20929730","PMID:23021213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated channel activity","termid":"GO:0022834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly calcium-gated channel activity","termid":"GO:0141147"}


id: GO:1990873
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane surrounding the cell tip consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the plasma membrane surrounding the cell tip or some other covalently attached group such as a GPI anchor that is similarly embedded in the plasma membrane surrounding the cell tip.","definition_xrefs":["PMID:20624220"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plasma membrane of cell tip (obsolete GO:1990873)","termid":"GO:1990873"}


id: PBO:0081674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 595","termid":"PBO:0081674"}


id: PBO:0017962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transmembrane transporter Ctr6","termid":"PBO:0017962"}


id: PBO:0035796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035796"}


id: GO:0097543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Proximal part of the ciliary shaft to which the inversin protein (also called Inv) specifically localizes. The inversin compartment appears to have a different protein composition than the rest of the cilium, although there is no structure that separates it form the distal part of the cilium.","definition_xrefs":["PMID:19050042","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary inversin compartment","synonyms":[{"name":"Inv compartment of the cilium","type":"exact"},{"name":"cilial inversin compartment","type":"exact"},{"name":"cilium inversin compartment","type":"exact"},{"name":"flagellar inversin compartment","type":"exact"},{"name":"flagellum inversin compartment","type":"exact"},{"name":"inversin compartment","type":"broad"}],"termid":"GO:0097543"}


id: PBO:0063155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 1","termid":"PBO:0063155"}


id: GO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (betaine or gamma-aminobutyric acid)(out) + Na+(out) = (betaine or gamma-aminobutyric acid)(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete betaine/GABA:sodium symporter activity (obsolete GO:0015376)","synonyms":[{"name":"betaine/GABA:sodium symporter activity","type":"exact"}],"termid":"GO:0015376"}


id: SO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The binding site (recognition site) of a homing endonuclease. The binding site is typically large.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homing_endonuclease_binding_site","synonyms":[{"name":"homing endonuclease binding site","type":"exact"}],"termid":"SO:0001257"}


id: PBO:0039664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 2","termid":"PBO:0039664"}


id: PBO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_model","termid":"PBO:0034212"}


id: PBO:0080390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 25 homolog","termid":"PBO:0080390"}


id: PBO:0063002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0063002"}


id: PBO:0090487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coA-sterol acyltransferase Are2","termid":"PBO:0090487"}


id: FYPO:0005571
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115608,115597,115604,115596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization to cell periphery during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell periphery during mitotic cell cycle","type":"related"},{"name":"protein absent from cell periphery during vegetative growth","type":"related"},{"name":"protein localization to cell periphery abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005571","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: PBO:0050462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 3","termid":"PBO:0050462"}


id: PBO:0054008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1338","termid":"PBO:0054008"}


id: PBO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy","termid":"PBO:0001110"}


id: PBO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X9-C motif containing 4","termid":"PBO:0043396"}


id: GO:0048920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a relatively undifferentiated cell along the developing posterior lateral line, originating from cranial ectodermal placodes situated behind the ear. The neuromast primordium deposits proneuromasts along the lateral line, from which the neuromasts will develop.","definition_xrefs":["GOC:dgh","PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast primordium migration","termid":"GO:0048883"},{"relation_name":"part_of","term_name":"posterior lateral line development","termid":"GO:0048916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast primordium migration","synonyms":[{"name":"PLL neuromast primordium migration","type":"exact"}],"termid":"GO:0048920"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: PBO:0047387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 25","termid":"PBO:0047387"}


id: PBO:0063729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2 pseudogene 1","termid":"PBO:0063729"}


id: PBO:0042513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 18, pseudogene","termid":"PBO:0042513"}


id: GO:0019229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction","termid":"GO:0019229"}


id: PBO:0074423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 22","termid":"PBO:0074423"}


id: PATO:0002468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being capable of swelling or stretching.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distensible","termid":"PATO:0002468"}


id: GO:2000759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"}


id: GO:1901014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 3alpha(S)-strictosidine.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete 3alpha(S)-strictosidine catabolic process (obsolete GO:1901014)","synonyms":[{"name":"3alpha(S)-strictosidine breakdown","type":"exact"},{"name":"3alpha(S)-strictosidine catabolism","type":"exact"},{"name":"3alpha(S)-strictosidine degradation","type":"exact"}],"termid":"GO:1901014"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: FYPO:0002454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and have abnormal cell morphology (i.e. size, shape, or structure), in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population with abnormal cell morphology (obsolete FYPO:0002454)","termid":"FYPO:0002454"}


id: PBO:0082661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; bridges interaction between Rna15p and Hrp1p in the CF I complex; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082661"}


id: GO:0019673
data:
  {"annotated_genes":["SJAG_00890","SJAG_03188","SJAG_02648","SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112153,99179,104465,85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00890":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03188":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GDP-mannose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GDP-mannose metabolism","type":"exact"}],"termid":"GO:0019673","terms_by_termid":{"GO:0009298":null}}


id: GO:0014015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gliogenesis","termid":"GO:0014013"},{"relation_name":"is_a","term_name":"positive regulation of neurogenesis","termid":"GO:0050769"},{"relation_name":"positively_regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gliogenesis","synonyms":[{"name":"activation of gliogenesis","type":"narrow"},{"name":"stimulation of gliogenesis","type":"narrow"},{"name":"up regulation of gliogenesis","type":"exact"},{"name":"up-regulation of gliogenesis","type":"exact"},{"name":"upregulation of gliogenesis","type":"exact"}],"termid":"GO:0014015"}


id: PBO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO pseudogene 1","termid":"PBO:0048102"}


id: SO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any of the DNA segments produced by discontinuous synthesis of the lagging strand during DNA replication.","definition_xrefs":["ISBN:0805350152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Okazaki_fragment","synonyms":[{"name":"Okazaki fragment","type":"exact"}],"termid":"SO:0001985"}


id: GO:0006904
data:
  {"annotated_genes":["SJAG_03499","SJAG_02587","SJAG_00280","SJAG_01772","SJAG_03005","SJAG_01697","SJAG_02320","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85848,86693,88430,96351,113564,114254,114478,114876],"is_not":false,"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.","definition_xrefs":["GOC:bc","GOC:aruk","GOC:jid","PMID:22438915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03499":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179","GO:0140056"],"is_obsolete":false,"name":"vesicle docking involved in exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle docking during exocytosis","type":"related"}],"termid":"GO:0006904","terms_by_termid":{"GO:0006904":null}}


id: PBO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphospho-oligosaccharide-protein glycosyltransferase Ost1 (predicted)","termid":"PBO:0002472"}


id: GO:0031621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of fever generation.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acute inflammatory response","termid":"GO:0002674"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"negative regulation of heat generation","termid":"GO:0031651"},{"relation_name":"negatively_regulates","term_name":"fever generation","termid":"GO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fever generation","synonyms":[{"name":"down regulation of fever","type":"exact"},{"name":"down-regulation of fever","type":"exact"},{"name":"downregulation of fever","type":"exact"},{"name":"inhibition of fever","type":"narrow"},{"name":"negative regulation of pyrexia","type":"exact"}],"termid":"GO:0031621"}


id: FYPO:0000679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a developmental process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process phenotype","termid":"FYPO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental process phenotype","synonyms":[{"name":"fission yeast developmental process phenotype","type":"exact"}],"termid":"FYPO:0000679"}


id: GO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"positively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte mediated immunity","synonyms":[{"name":"activation of lymphocyte mediated immunity","type":"narrow"},{"name":"stimulation of lymphocyte mediated immunity","type":"narrow"},{"name":"up regulation of lymphocyte mediated immunity","type":"exact"},{"name":"up-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"upregulation of lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002708"}


id: PBO:0043354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 1","termid":"PBO:0043354"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: PBO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derived_by_descent_from","termid":"PBO:0034349"}


id: PR:P87147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nascent polypeptide-associated complex subunit alpha-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03638","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.05","secondary_identifiers":["UniProtKB:P87147"],"synonyms":[{"name":"NAC-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NACA2","type":"exact"},{"name":"alpha-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87147"}


id: PBO:0062634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 1 pseudogene","termid":"PBO:0062634"}


id: PBO:0070509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 8","termid":"PBO:0070509"}


id: PBO:0073762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 pseudogene 1","termid":"PBO:0073762"}


id: FYPO:0004557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal. Increased growth may reflect an increased growth rate (i.e. faster growth), growth that occurs to a greater extent than normal, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell population growth","synonyms":[{"name":"fast aerobic vegetative cell population growth","type":"narrow"},{"name":"fast vegetative cell population growth","type":"narrow"},{"name":"increased aerobic vegetative cell population growth","type":"narrow"}],"termid":"FYPO:0004557"}


id: GO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a specific region of the gut is delineated into the area in which the pancreas will develop.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of animal organ identity","termid":"GO:0010092"},{"relation_name":"part_of","term_name":"pancreatic bud formation","termid":"GO:0061130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas field specification","termid":"GO:0061131"}


id: PBO:0029680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_telomeres","termid":"PBO:0029680"}


id: PR:O74978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1827.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.05c","synonyms":[{"name":"Spom972h-SPCC1827.05c","type":"exact"}],"termid":"PR:O74978"}


id: GO:0007399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system development","synonyms":[{"name":"pan-neural process","type":"related"}],"termid":"GO:0007399"}


id: PBO:0054642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2047","termid":"PBO:0054642"}


id: PBO:0080225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIRMA divergent transcript","termid":"PBO:0080225"}


id: PBO:0001066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv25 (predicted)","termid":"PBO:0001066"}


id: PBO:0063483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 1 pseudogene 1","termid":"PBO:0063483"}


id: PBO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0036133"}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_05260","SJAG_01777","SJAG_03092","SJAG_03287","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83543,85892,96011,98914,101178],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["PMID:16615890","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: PBO:0083236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation phenotype is likely due to the overlapping verified ORF SKI8/YGL213C","termid":"PBO:0083236"}


id: GO:1902413
data:
  {"annotated_genes":["SJAG_00845","SJAG_04551","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98241,98466],"is_not":false,"summary":null,"term":"GO:1902413"},{"annotations":[98465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03048":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytokinesis after mitosis","type":"exact"},{"name":"down regulation of mitotic cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis after mitosis","type":"exact"},{"name":"down-regulation of mitotic cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis after mitosis","type":"exact"},{"name":"downregulation of mitotic cytokinesis","type":"exact"},{"name":"inhibition of cytokinesis after mitosis","type":"narrow"},{"name":"inhibition of mitotic cytokinesis","type":"narrow"},{"name":"negative regulation of cytokinesis after mitosis","type":"exact"}],"termid":"GO:1902413","terms_by_termid":{"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: PBO:0046104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 7","termid":"PBO:0046104"}


id: PR:O13632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dual specificity protein phosphatase 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase yvh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.06","secondary_identifiers":["UniProtKB:O13632"],"synonyms":[{"name":"PTPase yvh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DUSP12","type":"exact"}],"termid":"PR:O13632"}


id: GO:0042290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete URM1 hydrolase activity (obsolete GO:0042290)","synonyms":[{"name":"URM1 hydrolase activity","type":"exact"}],"termid":"GO:0042290"}


id: GO:0061446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in endocardial cushion cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate determination","termid":"GO:0060913"},{"relation_name":"part_of","term_name":"endocardial cushion cell fate commitment","termid":"GO:0061445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell fate determination","termid":"GO:0061446"}


id: PBO:0057672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1263","termid":"PBO:0057672"}


id: GO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + protein alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine = protein beta-D-galactosyl-L-hydroxylysine + beta-D-glucose. The enzyme specifically hydrolyzes glucose from alpha-D-glucosyl- (1->2)-beta-D-galactosyl disaccharide units that are linked to hydroxylysine residues of collagen and collagen-like proteins.","definition_xrefs":["MetaCyc:3.2.1.107-RXN","EC:3.2.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase activity","secondary_identifiers":["RHEA:11068"],"synonyms":[{"name":"2-O-alpha-D-glucopyranosyl-5-O-alpha-D-galactopyranosylhydroxy-L-lysine glucohydrolase activity","type":"related"},{"name":"protein-alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine glucohydrolase activity","type":"related"}],"termid":"GO:0047402"}


id: GO:0038180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by nerve growth factor (NGF) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11520933","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"},{"relation_name":"part_of","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nerve growth factor signaling pathway","secondary_identifiers":["Wikipedia:Nerve_growth_factor"],"synonyms":[{"name":"NGF signaling pathway","type":"exact"},{"name":"nerve growth factor signalling pathway","type":"exact"}],"termid":"GO:0038180"}


id: PBO:0005285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential for RNA Silencing","termid":"PBO:0005285"}


id: PBO:0060539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuron navigator 1","termid":"PBO:0060539"}


id: PBO:0038933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1A (class I), alpha polypeptide","termid":"PBO:0038933"}


id: PBO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neudesin neurotrophic factor pseudogene 1","termid":"PBO:0060880"}


id: PBO:0036307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2","termid":"PBO:0036307"}


id: GO:1903386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:21724833","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"negatively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homophilic cell adhesion","synonyms":[{"name":"down regulation of homophilic cell adhesion","type":"exact"},{"name":"down-regulation of homophilic cell adhesion","type":"exact"},{"name":"downregulation of homophilic cell adhesion","type":"exact"},{"name":"inhibition of homophilic cell adhesion","type":"narrow"}],"termid":"GO:1903386"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: GO:1900615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide metabolic process","termid":"GO:1900555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"emericellamide A metabolic process","synonyms":[{"name":"emericellamide A metabolism","type":"exact"}],"termid":"GO:1900615"}


id: SO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including D-heptamer, D-spacer and D-nonamer in 5' of D-region of a D-gene or D-sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_gene_recombination_feature","synonyms":[{"name":"D gene recombination feature","type":"exact"}],"termid":"SO:0000492"}


id: GO:0052171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring when the organism is in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development during symbiotic interaction (obsolete GO:0052171)","synonyms":[{"name":"growth or development during symbiotic interaction","type":"exact"}],"termid":"GO:0052171"}


id: PR:O74737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rid1 gene.","definition_xrefs":["UniProtKB:O74737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-binding protein rid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.12","synonyms":[{"name":"Spom972h-rid1","type":"exact"}],"termid":"PR:O74737"}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: MOD:00725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group linked through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"complex glycosylation","termid":"MOD:00725"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: PBO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome oxidase biogenesis Cmc1 (predicted)","termid":"PBO:0004056"}


id: SO:0000962
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"single","termid":"SO:0000984"},{"relation_name":"is_a","term_name":"RNA_chromosome","termid":"SO:0000961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_RNA_chromosome","synonyms":[{"name":"single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000962"}


id: GO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system development","termid":"GO:0048731"}


id: PBO:0058742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6866","termid":"PBO:0058742"}


id: PBO:0056198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A8","termid":"PBO:0056198"}


id: GO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the clotting cascade of blood coagulation, a cascade of plasma enzymes that is triggered following damage to blood vessels, leading to formation of a clot.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood coagulation","termid":"GO:0030194"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of blood coagulation via clotting cascade","synonyms":[{"name":"activation of clotting cascade","type":"exact"}],"termid":"GO:0002543"}


id: PBO:0082637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; similar to human ataxin-2","termid":"PBO:0082637"}


id: GO:1990868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemokine stimulus.","definition_xrefs":["PMID:11113082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chemokine","termid":"GO:1990868"}


id: PBO:0034665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-thin_stable_microtubule_bundle","termid":"PBO:0034665"}


id: GO:1902014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(glycerol phosphate) teichoic acid.","definition_xrefs":["UniPathway:UPA00827","GOC:TermGenie","PMID:11882717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(glycerol phosphate) teichoic acid metabolic process","termid":"GO:1902013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085","GO:0044281"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902014"}


id: GO:1905613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["PMID:11606552","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental vegetative growth","termid":"GO:1905613"}


id: PR:Q9P6P5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01135","PANTHER:PTHR13048:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.18c","secondary_identifiers":["UniProtKB:Q9P6P5"],"synonyms":[{"name":"Spom972h-TRAPPC3","type":"exact"},{"name":"TRAPP subunit bet3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P5"}


id: GO:0150073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein-glutamine gamma-glutamyltransferase activity.","definition_xrefs":["PMID:26670206","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein-glutamine gamma-glutamyltransferase activity","termid":"GO:0150073"}


id: PBO:0081435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 286A","termid":"PBO:0081435"}


id: GO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Germline specific intercellular bridge. During cyst formation in insects, ring canals interconnect the cells of the cyst, facilitating the passage of cytoplasmic components between cells.","definition_xrefs":["PMID:9655801","GOC:mtg_sensu","PMID:9635420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular bridge","termid":"GO:0045171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germline ring canal","termid":"GO:0045172"}


id: PBO:0066013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase activating subunit like","termid":"PBO:0066013"}


id: GO:0098693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synaptic vesicle cycle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: FYPO:0001419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grows at the same rate as wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal cell population growth rate","synonyms":[{"name":"normal cell population proliferation","type":"related"},{"name":"normal cell proliferation","type":"related"},{"name":"normal growth rate","type":"broad"}],"termid":"FYPO:0001419"}


id: FYPO:0005559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"thick stable microtubule bundle","synonyms":[{"name":"increased stable microtubule bundle thickness","type":"exact"},{"name":"thick Q-MT bundles","type":"exact"},{"name":"thick quiescent cell MT bundle","type":"exact"},{"name":"thick quiescent cell microtubule bundle","type":"exact"},{"name":"thick stable microtubule array","type":"related"},{"name":"thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005559"}


id: GO:0051230
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"}]},"cv_name":"biological_process","definition":"The controlled breakdown of the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"spindle disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle breakdown","type":"exact"},{"name":"spindle catabolism","type":"exact"},{"name":"spindle degradation","type":"exact"}],"termid":"GO:0051230","terms_by_termid":{"GO:0051228":null}}


id: GO:0099636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed flow of cytosol (the liquid component of the cytoplasm) and the organelles it contains.","definition_xrefs":["GOC:dos","Wikipedia:Cytoplasmic_streaming&oldid=706214009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic streaming","secondary_identifiers":["Wikipedia:Cytoplasmic_streaming"],"termid":"GO:0099636"}


id: PATO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sloped","termid":"PATO:0001481"}


id: SO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded RNA duplex, at least 20bp long, used experimentally to inhibit gene function by RNA interference.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi_reagent","synonyms":[{"name":"RNAi reagent","type":"exact"}],"termid":"SO:0000337"}


id: GO:0032661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-18 production.","definition_xrefs":["PMID:23710316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-18 production","termid":"GO:0032621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-18 production","secondary_identifiers":["GO:0045381","GO:0150120"],"synonyms":[{"name":"regulation of IL-18 production","type":"exact"},{"name":"regulation of interleukin-18 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032661"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: PBO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS repressor factor like","termid":"PBO:0046491"}


id: PBO:0052134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNH1 intronic transcript 1","termid":"PBO:0052134"}


id: PBO:0041290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1RL antisense RNA 1","termid":"PBO:0041290"}


id: GO:1990410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular adrenomedullin combining with a dimeric adrenomedullin receptor on the surface of the target cell.","definition_xrefs":["GOC:bhm","PMID:10882736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adrenomedullin receptor signaling pathway","synonyms":[{"name":"AM receptor signaling pathway","type":"exact"}],"termid":"GO:1990410"}


id: PBO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.70","termid":"PBO:0000470"}


id: GO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the tip of the mating projection in unicellular fungi exposed to mating pheromone.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"mating projection tip","termid":"GO:0043332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"mating projection tip polarisome","termid":"GO:0031563"}


id: PBO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0035969"}


id: GO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate via the intermediates mesaconate and S-citramalate, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:GLUDEG-II-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glutamate catabolic process","termid":"GO:0019670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006091","GO:0044248","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process via mesaconate and citramalate","secondary_identifiers":["MetaCyc:PWY-5088","MetaCyc:PWY-5087"],"synonyms":[{"name":"glutamate fermentation via mesaconate and citramalate","type":"exact"}],"termid":"GO:0019671"}


id: GO:0060296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of cilium beating involved in ciliary motility.","definition_xrefs":["GOC:cilia","GOC:tb","GOC:dph","GOC:krc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium beat frequency","termid":"GO:0003356"},{"relation_name":"is_a","term_name":"regulation of cilium movement involved in cell motility","termid":"GO:0060295"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium beat frequency involved in ciliary motility","termid":"GO:0060296"}


id: GO:0033884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate, and phosphocholine + H2O = choline + phosphate.","definition_xrefs":["EC:3.1.3.75"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphoethanolamine/phosphocholine phosphatase activity (obsolete GO:0033884)","synonyms":[{"name":"phosphoethanolamine/phosphocholine phosphatase activity","type":"exact"}],"termid":"GO:0033884"}


id: PBO:0016927
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae NSR1","termid":"PBO:0016927"}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: PBO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 2","termid":"PBO:0045317"}


id: PBO:0041114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone marrow stromal cell antigen 1","termid":"PBO:0041114"}


id: PBO:0056690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: PBO:0082026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ZZ-type containing 3","termid":"PBO:0082026"}


id: PBO:0041043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3 pseudogene 1","termid":"PBO:0041043"}


id: PBO:0068970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 214, pseudogene","termid":"PBO:0068970"}


id: SO:0001664
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A discontinuous core element of RNA polymerase II transcribed genes, situated downstream of the TSS. It is composed of three sub elements: SI, SII and SIII.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCE","synonyms":[{"name":"downstream core element","type":"related"}],"termid":"SO:0001664"}


id: PBO:0072569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal pigment epithelium-derived rhodopsin homolog","termid":"PBO:0072569"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_04677","SJAG_04675","SJAG_04743","SJAG_02474","SJAG_02457","SJAG_00532","SJAG_00802","SJAG_02834","SJAG_03862","SJAG_04607","SJAG_04867","SJAG_00792","SJAG_01004","SJAG_04032","SJAG_02735","SJAG_00822","SJAG_04031","SJAG_01694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73816,85396,88404,89054,90164,92385,96578,100352,103493,109954],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[90209,96577,88551,99886,90217],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[99895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[108871,99888,88552,88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[106861,61613,106862,61330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null}}


id: PBO:0039202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 5","termid":"PBO:0039202"}


id: GO:0009507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast","secondary_identifiers":["Wikipedia:Chloroplast"],"termid":"GO:0009507"}


id: PBO:0059152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 4","termid":"PBO:0059152"}


id: PBO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"para-hydroxybenzoate--polyprenyltransferasePpt1","termid":"PBO:0000786"}


id: PBO:0039783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 10","termid":"PBO:0039783"}


id: PBO:0027474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_telomere","termid":"PBO:0027474"}


id: PBO:0079315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 7B","termid":"PBO:0079315"}


id: GO:1905867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epididymis over time, from its formation to the mature structure.","definition_xrefs":["PMID:12388089","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epididymis development","synonyms":[{"name":"epididymus development","type":"exact"}],"termid":"GO:1905867"}


id: GO:0071583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of zinc ions (Zn2+) from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane transport","termid":"GO:0071580"},{"relation_name":"is_a","term_name":"negative regulation of zinc ion transport","termid":"GO:0071582"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"negatively_regulates","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of zinc ion transmembrane transport","synonyms":[{"name":"negative regulation of zinc ion membrane transport","type":"exact"}],"termid":"GO:0071583"}


id: PBO:0077873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase","termid":"PBO:0077873"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: GO:1904310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["PMID:21597460","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to cordycepin","termid":"GO:1904309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cordycepin","synonyms":[{"name":"cellular response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904310"}


id: PBO:0049241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM8 antisense RNA 1","termid":"PBO:0049241"}


id: PBO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog Lnp1","termid":"PBO:0014616"}


id: PBO:0109298
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad1 homodimers assemble co-translationally","termid":"PBO:0109298"}


id: PBO:0075745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72","termid":"PBO:0075745"}


id: PBO:0067049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 69, pseudogene","termid":"PBO:0067049"}


id: GO:1904993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in positive regulation of G2/M transition of mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","PMID:24728197","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle (obsolete GO:1904993)","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"narrow"},{"name":"activation of cyclin-dependent protein kinase activity involved in positive regulation of mitotic entry","type":"narrow"},{"name":"positive regulation of CDK activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"exact"},{"name":"positive regulation of CDK activity involved in positive regulation of mitotic entry","type":"exact"},{"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in positive regulation of mitotic entry","type":"exact"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"narrow"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in positive regulation of mitotic entry","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"exact"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in positive regulation of mitotic entry","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in positive regulation of mitotic entry","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in positive regulation of G2/M transition of mitotic cell cycle","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in positive regulation of mitotic entry","type":"exact"}],"termid":"GO:1904993"}


id: SO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:allelic","type":"exact"},{"name":"allelic pseudogenic rRNA","type":"exact"}],"termid":"SO:0002196"}


id: PBO:0054322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1714","termid":"PBO:0054322"}


id: PBO:0067895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 197","termid":"PBO:0067895"}


id: PBO:0087538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA is comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins, which influences multiple processes such as the cell cycle, heat-shock resistance, mating, sporulation, and telomeric silencing","termid":"PBO:0087538"}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: PBO:0059036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP24 opposite strand","termid":"PBO:0059036"}


id: PBO:0003720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpc10","termid":"PBO:0003720"}


id: PBO:0045678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein 2 intermediate chain 2","termid":"PBO:0045678"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: PBO:0005750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucear export factor Sac3 (predicted)","termid":"PBO:0005750"}


id: GO:0004020
data:
  {"annotated_genes":["SJAG_00084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86142],"is_not":false,"summary":null,"term":"GO:0004020"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenylylsulfate = ADP + 3'-phosphoadenosine 5'-phosphosulfate.","definition_xrefs":["EC:2.7.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"adenylylsulfate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174389","Reactome:R-HSA-3560785","RHEA:24152","MetaCyc:ADENYLYLSULFKIN-RXN"],"synonyms":[{"name":"5'-phosphoadenosine sulfate kinase activity","type":"related"},{"name":"APS kinase activity","type":"related"},{"name":"ATP:adenylyl-sulfate 3'-phosphotransferase activity","type":"related"},{"name":"adenosine 5'-phosphosulfate kinase activity","type":"related"},{"name":"adenosine phosphosulfate kinase activity","type":"related"},{"name":"adenosine phosphosulfokinase activity","type":"related"},{"name":"adenosine-5'-phosphosulfate 3'-phosphotransferase activity","type":"exact"},{"name":"adenosine-5'-phosphosulfate-3'-phosphokinase activity","type":"related"},{"name":"adenosine-5'-phosphosulphate 3'-phosphotransferase activity","type":"exact"},{"name":"adenylyl-sulfate kinase activity","type":"exact"},{"name":"adenylyl-sulphate kinase activity","type":"exact"},{"name":"adenylylsulfate kinase (phosphorylating)","type":"related"}],"termid":"GO:0004020","terms_by_termid":{"GO:0004020":null}}


id: PBO:0062881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 2","termid":"PBO:0062881"}


id: FYPO:0002061
data:
  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id: PBO:0070795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 25","termid":"PBO:0070795"}


id: RO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Ib bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Ib_bouton_to","termid":"RO:0002105"}


id: FYPO:0005774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of magnesium ions measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular magnesium level","synonyms":[{"name":"decreased cellular magnesium ion level","type":"exact"},{"name":"decreased cellular magnesium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular magnesium level during vegetative growth","type":"exact"},{"name":"decreased magnesium accumulation","type":"related"},{"name":"reduced cellular magnesium level","type":"exact"}],"termid":"FYPO:0005774"}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0483","PubMed:11320328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: PBO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 1","termid":"PBO:0060795"}


id: PBO:0073286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 7","termid":"PBO:0073286"}


id: PBO:0073092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit C pseudogene 1","termid":"PBO:0073092"}


id: PBO:0110346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 2","termid":"PBO:0110346"}


id: GO:0140513
data:
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id: GO:0019128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The racemization of peptidyl-tryptophan.","definition_xrefs":["RESID:AA0198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-L-amino acid racemization","termid":"GO:0018085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"peptidyl-tryptophan racemization","secondary_identifiers":["GO:0018374","GO:0018092"],"termid":"GO:0019128"}


id: FYPO:0002032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cables is abnormal during mitosis. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable morphology during mitosis","synonyms":[{"name":"abnormal actin cable morphology during mitosis during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable morphology during mitosis during vegetative growth","type":"exact"},{"name":"abnormal actin cable morphology during mitotic M phase","type":"related"},{"name":"abnormal actin cable morphology during mitotic nuclear division","type":"exact"},{"name":"abnormal formin-nucleated actin cable morphology during mitosis","type":"exact"},{"name":"disorganized actin cables during mitosis","type":"exact"}],"termid":"FYPO:0002032"}


id: GO:0006491
data:
  {"annotated_genes":["SJAG_04571","SJAG_04095","SJAG_01972","SJAG_03535","SJAG_03280","SJAG_03871","SJAG_03790","SJAG_04401"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83519,89244,89245,89246,89247,94868,94869,94870,94871,98807,109838,114088,114561],"is_not":false,"summary":null,"term":"GO:0006491"}]},"cv_name":"biological_process","definition":"The conversion of N-linked glycan (N = nitrogen) structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking.","definition_xrefs":["ISBN:0879695595","PMID:12736198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01972":null,"SJAG_03280":null,"SJAG_03535":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04095":null,"SJAG_04401":null,"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006492"],"synonyms":[{"name":"N-linked glycoprotein maturation","type":"exact"},{"name":"glycoprotein trimming involved in glycoprotein maturation","type":"narrow"}],"termid":"GO:0006491","terms_by_termid":{"GO:0006491":null}}


id: GO:0018770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2Z,4Z,7-trienoate + H2O = 2-(4'-chlorophenyl)-3,3-dichloropropenoate + cis-2-Hydroxy-3-chloropenta-2,4-dienone + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate hydrolase activity (obsolete GO:0018770)","termid":"GO:0018770"}


id: GO:1901305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"negatively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermidine biosynthetic process","synonyms":[{"name":"down regulation of spermidine anabolism","type":"exact"},{"name":"down regulation of spermidine biosynthesis","type":"exact"},{"name":"down regulation of spermidine biosynthetic process","type":"exact"},{"name":"down regulation of spermidine formation","type":"exact"},{"name":"down regulation of spermidine synthesis","type":"exact"},{"name":"down-regulation of spermidine anabolism","type":"exact"},{"name":"down-regulation of spermidine biosynthesis","type":"exact"},{"name":"down-regulation of spermidine biosynthetic process","type":"exact"},{"name":"down-regulation of spermidine formation","type":"exact"},{"name":"down-regulation of spermidine synthesis","type":"exact"},{"name":"downregulation of spermidine anabolism","type":"exact"},{"name":"downregulation of spermidine biosynthesis","type":"exact"},{"name":"downregulation of spermidine biosynthetic process","type":"exact"},{"name":"downregulation of spermidine formation","type":"exact"},{"name":"downregulation of spermidine synthesis","type":"exact"},{"name":"inhibition of spermidine anabolism","type":"exact"},{"name":"inhibition of spermidine biosynthesis","type":"exact"},{"name":"inhibition of spermidine biosynthetic process","type":"narrow"},{"name":"inhibition of spermidine formation","type":"exact"},{"name":"inhibition of spermidine synthesis","type":"exact"},{"name":"negative regulation of spermidine anabolism","type":"exact"},{"name":"negative regulation of spermidine biosynthesis","type":"exact"},{"name":"negative regulation of spermidine formation","type":"exact"},{"name":"negative regulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901305"}


id: CHEBI:48080
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A","termid":"CHEBI:48080"}


id: GO:1904101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acadesine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","GOC:mr","PMID:20802119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acadesine","termid":"GO:1904101"}


id: PBO:0041533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 49","termid":"PBO:0041533"}


id: PBO:0069611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 888, pseudogene","termid":"PBO:0069611"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: GO:0140320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.","definition_xrefs":["PMID:20724636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor decoy activity","termid":"GO:0140319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"PAMP receptor decoy activity","synonyms":[{"name":"pathogen-associated molecular pattern receptor decoy activity","type":"exact"},{"name":"pattern recognition receptor decoy activity","type":"exact"}],"termid":"GO:0140320"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["UniProtKB:Q10325","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: GO:0019709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0019709"}


id: GO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alpha-glucoside(out) + H+(out) = alpha-glucoside(in) + H+(in). Alpha-glucosides include trehalose, maltose, turanose, isomaltose, alpha-methylglucoside, maltotriose, palatinose, trehalose and melezitose.","definition_xrefs":["TC:2.A.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucoside transmembrane transporter activity","termid":"GO:0015151"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"alpha-glucoside:proton symporter activity","synonyms":[{"name":"alpha-glucoside:hydrogen symporter activity","type":"exact"},{"name":"general alpha-glucoside transporter activity","type":"broad"},{"name":"general alpha-glucoside:hydrogen symporter activity","type":"exact"},{"name":"general alpha-glucoside:proton symporter activity","type":"exact"}],"termid":"GO:0005352"}


id: PBO:0066061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 5","termid":"PBO:0066061"}


id: FYPO:0007607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal when cells are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of mitotic DNA replication initiation","termid":"FYPO:0006031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen starvation","synonyms":[{"name":"delayed mitotic DNA replication initiation during recovery from nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen depletion","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007607"}


id: PR:O94562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1771.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.03c","synonyms":[{"name":"Spom972h-SPBC1773.03c","type":"exact"}],"termid":"PR:O94562"}


id: PBO:0078190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-3","termid":"PBO:0078190"}


id: PR:Q10165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnt6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosylation factor GTPase-activating protein cnt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.10","synonyms":[{"name":"Spom972h-cnt6","type":"exact"}],"termid":"PR:Q10165"}


id: SO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 2 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_2","synonyms":[{"name":"A box type 2","type":"related"}],"termid":"SO:0001676"}


id: PBO:0025447
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urea cycle disorders","termid":"PBO:0025447"}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_04901","SJAG_04271","SJAG_00405","SJAG_02248","SJAG_01483","SJAG_02529","SJAG_03746","SJAG_00486","SJAG_05309","SJAG_04010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88391,92973,93651,95926,95927,99013,100225,102907,103802,110010],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000226","GO:0007010","GO:0030437","GO:0044085"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: GO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredinium development","synonyms":[{"name":"development of uredium","type":"exact"}],"termid":"GO:0075279"}


id: GO:0140908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 122) = CoA + histone H3 N6-acetyl-L-lysine (position 122).","definition_xrefs":["PMID:23415232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740","GO:0034212","GO:0140096"],"is_obsolete":false,"name":"histone H3K122 acetyltransferase activity","synonyms":[{"name":"histone H3-K122 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K122 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K122 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K122 specific)","type":"exact"}],"termid":"GO:0140908"}


id: PBO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 4, pseudogene","termid":"PBO:0070047"}


id: PBO:0056600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm1 nuclear protein","termid":"PBO:0056600"}


id: PBO:0067754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 53","termid":"PBO:0067754"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0113181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; role in chromatin organization at replication origins, along with chromatin remodellers; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0113181"}


id: GO:0061707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The single-organism macropinocytosis process that results in the uptake of an extracellular exosome.","definition_xrefs":["PMID:24951588","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macropinocytosis","termid":"GO:0044351"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"extracellular exosome macropinocytosis","termid":"GO:0061707"}


id: PBO:0065965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 1","termid":"PBO:0065965"}


id: PBO:0063025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 5","termid":"PBO:0063025"}


id: GO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of protocatechuate, the anion of 3,4-dihydroxybenzoic acid, to yield oxaloacetate and pyruvate.","definition_xrefs":["MetaCyc:P184-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"oxaloacetate metabolic process","termid":"GO:0006107"},{"relation_name":"is_a","term_name":"3,4-dihydroxybenzoate catabolic process","termid":"GO:0019619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"protocatechuate catabolic process, meta-cleavage","synonyms":[{"name":"3,4-dihydroxybenzoate catabolic process, meta-cleavage","type":"related"},{"name":"protocatechuate breakdown, meta-cleavage","type":"exact"},{"name":"protocatechuate catabolic process to oxaloacetate and pyruvate","type":"exact"},{"name":"protocatechuate degradation, meta-cleavage","type":"exact"}],"termid":"GO:0019617"}


id: GO:0032609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon.","definition_xrefs":["GOC:mah","PMID:15546383","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"type II interferon production","secondary_identifiers":["GO:0042095","GO:0072643"],"synonyms":[{"name":"IFNG production","type":"exact"},{"name":"interferon-gamma biosynthetic process","type":"narrow"},{"name":"interferon-gamma production","type":"exact"},{"name":"interferon-gamma secretion","type":"narrow"},{"name":"type II IFN production","type":"exact"}],"termid":"GO:0032609"}


id: PBO:0034708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1 (predicted)","termid":"PBO:0034708"}


id: PBO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM193B divergent transcript","termid":"PBO:0047167"}


id: PBO:0073922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 11","termid":"PBO:0073922"}


id: GO:0009476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IV cytochrome c (obsolete GO:0009476)","synonyms":[{"name":"class IV cytochrome c","type":"exact"}],"termid":"GO:0009476"}


id: FYPO:0002258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers","synonyms":[{"name":"fragmented vacuoles","type":"related"},{"name":"small vacuoles present in greater numbers","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size","type":"exact"}],"termid":"FYPO:0002258"}


id: PBO:0060758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 2","termid":"PBO:0060758"}


id: FYPO:0007638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anisotropic movement of chromatin occurs to a lower extent than normal during mitosis. Normally, chromatin moves to a lesser extent, and with less freedom of movement direction (i.e. more anisotropically), during mitosis than during interphase.","definition_xrefs":["PMID:33434270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin mobility","termid":"FYPO:0007637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased anisotropic motion of mitotic chromatin","synonyms":[{"name":"decreased anisotropic chromatin motion during mitosis","type":"exact"},{"name":"decreased anisotropic chromatin motion during mitotic M phase","type":"related"},{"name":"decreased anisotropic chromatin movement during mitosis","type":"exact"},{"name":"decreased anisotropic mitotic chromatin mobility","type":"exact"},{"name":"decreased anisotropic mitotic chromatin motion","type":"exact"},{"name":"decreased anisotropic motion of mitotic chromatin during vegetative growth","type":"exact"},{"name":"decreased anisotropic movement of mitotic chromatin","type":"exact"},{"name":"reduced anisotropic motion of mitotic chromatin","type":"exact"}],"termid":"FYPO:0007638"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: PBO:0065285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1","termid":"PBO:0065285"}


id: GO:1902517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of glycerol-3-phosphate-transporting ATPase activity.","definition_xrefs":["GOC:TermGenie","PMID:23013274","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"glycerol-3-phosphate-transporting ATPase complex","termid":"GO:1902517"}


id: GO:1990188
data:
  {"annotated_genes":["SJAG_03689","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101462,112061],"is_not":false,"summary":null,"term":"GO:1990188"}]},"cv_name":"molecular_function","definition":"Binding to euchromatin, a dispersed and relatively uncompacted form of chromatin.","definition_xrefs":["PMID:22431512","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00471":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"euchromatin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990188","terms_by_termid":{"GO:1990188":null}}


id: PBO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_from_iMTOC","termid":"PBO:0035742"}


id: PBO:0087596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; green fluorescent protein (GFP)-fusion protein localizes to the endosome; YLR408C is not an essential gene","termid":"PBO:0087596"}


id: PBO:0056057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia-associated non-coding IGF1R activator RNA 1","termid":"PBO:0056057"}


id: GO:0045975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, mediated by small non-coding RNAs, that activates or increases the rate that mRNAs are effectively translated into protein.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of translation, ncRNA-mediated","termid":"GO:0045974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation, ncRNA-mediated","synonyms":[{"name":"activation of mRNA translation, ncRNA-mediated","type":"narrow"},{"name":"stimulation of mRNA translation, ncRNA-mediated","type":"narrow"},{"name":"up regulation of mRNA translation, ncRNA-mediated","type":"exact"},{"name":"up-regulation of mRNA translation, ncRNA-mediated","type":"exact"},{"name":"upregulation of mRNA translation, ncRNA-mediated","type":"exact"}],"termid":"GO:0045975"}


id: FYPO:0007681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a RNA-DNA hybrid ribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal RNA-DNA hybrid ribonuclease activity","termid":"FYPO:0007681"}


id: PBO:0063198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 29","termid":"PBO:0063198"}


id: GO:0033424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"CCG codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033424"}


id: MOD:00774
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 243.02-243.03 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"}


id: FYPO:0005494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of proteins along microtubules is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased transport along microtubule during vegetative growth","termid":"FYPO:0005526"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein transport along microtubule during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005494"}


id: PBO:0080803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA pseudogene 1","termid":"PBO:0080803"}


id: GO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell receptor signaling pathway","termid":"GO:0050855"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell receptor signaling pathway","synonyms":[{"name":"activation of B cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of B cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of B-lymphocyte receptor signalling pathway","type":"exact"},{"name":"stimulation of B cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of B cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of B cell receptor signaling pathway","type":"exact"},{"name":"upregulation of B cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050861"}


id: PBO:0059088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC1 antisense RNA 1","termid":"PBO:0059088"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:6218174","PMID:2557057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: PBO:0090274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-lyase Cbl1","termid":"PBO:0090274"}


id: PR:O14290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.04","synonyms":[{"name":"Spom972h-SPAC9E9.04","type":"exact"}],"termid":"PR:O14290"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22291963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: PR:Q96VG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC683.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96VG3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C683.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC683.03","synonyms":[{"name":"Spom972h-SPAC683.03","type":"exact"}],"termid":"PR:Q96VG3"}


id: GO:0044656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a post-lysosomal vacuole, a membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle size","termid":"GO:0097494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of post-lysosomal vacuole size","synonyms":[{"name":"regulation of post-lysosome size","type":"exact"},{"name":"regulation of postlysosomal vacuole size","type":"exact"},{"name":"regulation of postlysosome vacuole size","type":"exact"}],"termid":"GO:0044656"}


id: SO:0000348
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases bound to repeating units. The forms found in nature are deoxyribonucleic acid (DNA), where the repeating units are 2-deoxy-D-ribose rings connected to a phosphate backbone, and ribonucleic acid (RNA), where the repeating units are D-ribose rings connected to a phosphate backbone.","definition_xrefs":["RSC:cb","CHEBI:33696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic_acid","secondary_identifiers":["http://en.wikipedia.org/wiki/Nucleic_acid"],"synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"SO:0000348"}


id: PBO:0045128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMXL1 divergent transcript","termid":"PBO:0045128"}


id: GO:0051641
data:
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id: GO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an ectoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"ectodermal cell fate commitment","termid":"GO:0001712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal cell fate determination","synonyms":[{"name":"ectoderm cell fate determination","type":"exact"}],"termid":"GO:0001713"}


id: GO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mature natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). A mature natural killer cell is a natural killer cell that is developmentally mature and expresses a variety of inhibitory and activating receptors that recognize MHC class and other stress related molecules.","definition_xrefs":["CL:0000824","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature natural killer cell chemotaxis","synonyms":[{"name":"activated natural killer cell chemotaxis","type":"exact"}],"termid":"GO:0035782"}


id: GO:0106343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction glutarate + 2-oxoglutarate + O2 = (S)-2-hydroxyglutarate + succinate + CO2.","definition_xrefs":["PMID:30498244","RHEA:13821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutarate dioxygenase activity","secondary_identifiers":["EC:1.14.11.64"],"termid":"GO:0106343"}


id: PBO:0014579
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although this is demonstrated to be DNA polymerase epsilon interactor and names Dpb3, it appears to be the ortholog of S. cerevisie BUR6 and human DRAP1. The real Dpb3 appears to be the newly identified SPCC16C4.22 date=20120829","termid":"PBO:0014579"}


id: PBO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin (HP1) family chromodomain protein Chp1","termid":"PBO:0090411"}


id: PR:O74925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protein pep3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.02","secondary_identifiers":["UniProtKB:O74925"],"synonyms":[{"name":"Spom972h-VPS18","type":"exact"},{"name":"vacuolar protein sorting-associated protein 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74925"}


id: GO:0034837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole-cis-6,7-dihydrodiol = 6,7-dihydroxy-2-mercaptobenzothiazole + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole-cis-6,7-dihydrodiol dehydrogenase activity (obsolete GO:0034837)","termid":"GO:0034837"}


id: PBO:0113274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion, named for [PSI+] INducibility; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0113274"}


id: PBO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_hydroxyurea","termid":"PBO:0030188"}


id: PBO:0079001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 1-1","termid":"PBO:0079001"}


id: PR:O13792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spliceosome RNA helicase BAT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase uap56 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.14c","secondary_identifiers":["UniProtKB:O13792"],"synonyms":[{"name":"Spom972h-DDX39B","type":"exact"}],"termid":"PR:O13792"}


id: PATO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's ability to withstand great strain without tearing or breaking.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fragile","synonyms":[{"name":"resilient","type":"related"},{"name":"strong","type":"related"},{"name":"tough","type":"related"}],"termid":"PATO:0001716"}


id: GO:1900805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.","definition_xrefs":["PMID:16755625","PMID:17464044","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"brevianamide F biosynthetic process","secondary_identifiers":["GO:1900803"],"synonyms":[{"name":"C16H17N3O2 anabolism","type":"related"},{"name":"C16H17N3O2 biosynthesis","type":"related"},{"name":"C16H17N3O2 biosynthetic process","type":"related"},{"name":"C16H17N3O2 formation","type":"related"},{"name":"C16H17N3O2 synthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride anabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthetic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride formation","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride synthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride anabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthetic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride formation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride synthesis","type":"related"},{"name":"brevianamide F anabolism","type":"exact"},{"name":"brevianamide F biosynthesis","type":"exact"},{"name":"brevianamide F formation","type":"exact"},{"name":"brevianamide F metabolic process","type":"narrow"},{"name":"brevianamide F synthesis","type":"exact"},{"name":"cyclo-(Trp-Pro) anabolism","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthesis","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthetic process","type":"related"},{"name":"cyclo-(Trp-Pro) formation","type":"related"},{"name":"cyclo-(Trp-Pro) synthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro anabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthetic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro formation","type":"related"},{"name":"cyclo-L-Trp-L-Pro synthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline anabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthetic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline formation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline synthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine anabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthetic process","type":"related"},{"name":"tryptophan-proline diketopiperazine formation","type":"related"},{"name":"tryptophan-proline diketopiperazine synthesis","type":"related"}],"termid":"GO:1900805"}


id: PBO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 1","termid":"PBO:0046090"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: PBO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein (predicted)","termid":"PBO:0003930"}


id: PBO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec73 (predicted)","termid":"PBO:0001574"}


id: PBO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 6","termid":"PBO:0046843"}


id: PBO:0070232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 170 pseudogene","termid":"PBO:0070232"}


id: PBO:0055750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA SMARCA2 (BRM) associated","termid":"PBO:0055750"}


id: PBO:0090163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Mtr10","termid":"PBO:0090163"}


id: GO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, that involve more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate metabolic process (obsolete GO:0044040)","synonyms":[{"name":"main pathways of carbohydrate metabolic process","type":"narrow"},{"name":"main pathways of carbohydrate metabolism","type":"narrow"},{"name":"multi-organism carbohydrate metabolism","type":"exact"}],"termid":"GO:0044040"}


id: PBO:0050312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 14","termid":"PBO:0050312"}


id: GO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-3,6-dideoxy-D-glucose = CDP-3,6-dideoxy-D-mannose.","definition_xrefs":["EC:5.1.3.10","RHEA:21656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"CDP-abequose epimerase activity","secondary_identifiers":["MetaCyc:RXN-9160","KEGG_REACTION:R04266"],"synonyms":[{"name":"CDP-3,6-dideoxy-D-glucose 2-epimerase activity","type":"related"},{"name":"CDP-D-abequose 2-epimerase activity","type":"related"},{"name":"CDP-paratose 2-epimerase activity","type":"related"},{"name":"CDP-paratose epimerase activity","type":"related"},{"name":"CDP-tyvelose 2-epimerase activity","type":"related"},{"name":"cytidine diphosphate paratose-2-epimerase activity","type":"related"},{"name":"cytidine diphosphoabequose epimerase activity","type":"related"},{"name":"cytidine diphosphodideoxyglucose epimerase activity","type":"related"},{"name":"cytidine diphosphoparatose epimerase activity","type":"related"}],"termid":"GO:0047732"}


id: FYPO:0001719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lithium ions. Cells stop growing (and may die) at a concentration of lithium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to lithium","synonyms":[{"name":"hypersensitive to lithium","type":"exact"},{"name":"sensitive to lithium during mitotic cell cycle","type":"related"},{"name":"sensitive to lithium during vegetative growth","type":"exact"},{"name":"sensitive to lithium ions","type":"exact"}],"termid":"FYPO:0001719"}


id: GO:0106188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked the hydrolysis of a nucleoside triphosphate (obsolete GO:0106188)","secondary_identifiers":["EC:7.1.2.-"],"termid":"GO:0106188"}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: PBO:0084438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); encoded within the complex locus MAL2","termid":"PBO:0084438"}


id: GO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-1-phenylethanol + NAD+ = acetophenone + H+ + NADH.","definition_xrefs":["RHEA:28198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-phenylethanol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0032","EC:1.1.1.311"],"termid":"GO:0018449"}


id: PBO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB intronic transcript 1","termid":"PBO:0051950"}


id: PBO:0078990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 3-1","termid":"PBO:0078990"}


id: GO:0009506
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"},{"relation_name":"part_of","term_name":"symplast","termid":"GO:0055044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"plasmodesma","secondary_identifiers":["Wikipedia:Plasmodesma"],"synonyms":[{"name":"plasmodesmata","type":"exact"}],"termid":"GO:0009506"}


id: GO:0060686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of prostatic bud formation, the morphogenetic process in which a region of the fetal urogenital sinus epithelium is specified to become the prostate, resulting in prostate bud outgrowth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"prostatic bud formation","termid":"GO:0060513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostatic bud formation","termid":"GO:0060686"}


id: PBO:0078117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 6","termid":"PBO:0078117"}


id: PBO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 21","termid":"PBO:0071362"}


id: GO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 fibroblast growth factor receptor (FGFR1).","definition_xrefs":["GOC:ceb","GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR1 binding","type":"broad"},{"name":"FGFR1 ligand","type":"narrow"},{"name":"breathless binding","type":"narrow"},{"name":"breathless ligand","type":"narrow"},{"name":"type 1 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005105"}


id: PATO:0000547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity quality inhering in a bearer by virtue of the bearer's exhibiting photosensitivity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitivity","termid":"PATO:0000927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photosensitive","termid":"PATO:0000547"}


id: PBO:0085068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonfunctional homolog of Gpm1p phosphoglycerate mutase; if functional, would convert 3-phosphoglycerate to 2-phosphoglycerate in glycolysis; GPM3 has a paralog, GPM2, that arose from the whole genome duplication","termid":"PBO:0085068"}


id: MOD:01691
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-(12-ketomyristoyl)-L-cysteine.","definition_xrefs":["PubMed:19053188","RESID:AA0517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-(12-ketomyristoyl)-L-cysteine","synonyms":[{"name":"2-(12-oxotetradecanoyl)amino-3-sulfanylpropanoic acid","type":"exact"},{"name":"LIPID N-(12-oxomyristoyl)cysteine","type":"exact"},{"name":"N-(12-ketomyristoyl)-L-cysteine","type":"exact"},{"name":"N-(12-oxotetradecanoyl)cysteine","type":"exact"}],"termid":"MOD:01691"}


id: GO:0140595
data:
  {"annotated_genes":["SJAG_00569","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106481,107867],"is_not":false,"summary":null,"term":"GO:0140595"}]},"cv_name":"cellular_component","definition":"A large mitochondrial outer membrane translocase complex that mediates transport of proteins into mitochondrial compartments. MIM constitutes the major integration site for alpha-helical embedded proteins. In yeast, consists oof Mim1 and Mim2.","definition_xrefs":["PMID:33035511","PMID:19944477","PMID:22467864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial outer membrane translocase complex","termid":"GO:0005742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00569":null,"SJAG_02361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"MIM complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial outer import machinery","type":"exact"}],"termid":"GO:0140595","terms_by_termid":{"GO:0140595":null}}


id: GO:1901187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ephrin receptor signaling pathway","synonyms":[{"name":"regulation of Eph receptor signaling pathway","type":"exact"},{"name":"regulation of Eph receptor signalling pathway","type":"exact"}],"termid":"GO:1901187"}


id: FYPO:0000402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased","type":"related"},{"name":"increased G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"increased cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased occurrence of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000402"}


id: PBO:0042744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein S","termid":"PBO:0042744"}


id: PBO:0065024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 3","termid":"PBO:0065024"}


id: PBO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine palmitoyltransferase 1C","termid":"PBO:0043838"}


id: GO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a virus that results in the death of a cell in the host organism.","definition_xrefs":["GOC:jl","GOC:bf","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete killing by virus of host cell (obsolete GO:0039633)","synonyms":[{"name":"killing by phage of host cells","type":"narrow"},{"name":"killing by virus of host cells","type":"exact"}],"termid":"GO:0039633"}


id: PBO:0053402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 332","termid":"PBO:0053402"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: PBO:0083353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene JJJ1/YNL227C","termid":"PBO:0083353"}


id: PBO:0063577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 apoptosis effector related to PMP22","termid":"PBO:0063577"}


id: GO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"positively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein phosphorylation","synonyms":[{"name":"activation of protein amino acid phosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid phosphorylation","type":"exact"},{"name":"stimulation of protein amino acid phosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid phosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"upregulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001934"}


id: FYPO:0003899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}


id: GO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast support cell differentiation","termid":"GO:0048906"}


id: PBO:0056122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal enzyme trafficking factor","termid":"PBO:0056122"}


id: GO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions downstream of the MRN complex to promote DNA repair and the G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and is composed of SOSS-B (SOSS-B1/OBFC2B or SOSS-B2/OBFC2A), SOSS-A/INTS3 and SOSS-C/C9orf80.","definition_xrefs":["PMID:19683501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"SOSS complex","termid":"GO:0070876"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"positive regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120142"}


id: GO:0046016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"},{"relation_name":"is_a","term_name":"regulation of transcription by glucose","termid":"GO:0046015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by glucose","synonyms":[{"name":"activation of transcription by glucose","type":"narrow"},{"name":"stimulation of transcription by glucose","type":"narrow"},{"name":"up regulation of transcription by glucose","type":"exact"},{"name":"up-regulation of transcription by glucose","type":"exact"},{"name":"upregulation of transcription by glucose","type":"exact"}],"termid":"GO:0046016"}


id: GO:0021929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to stellate cells. A cerebellar stellate cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","PMID:15157725","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stellate cell precursor proliferation","termid":"GO:0021929"}


id: GO:0021949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of a precerebellar neuronal precursor in which a cell move from the rhombic lip, orthogonal to the direction of radial migration and ultimately reside in the brainstem.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:15157725","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}


id: GO:0019145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-aminobutanal + NAD+ + H2O = 4-aminobutanoate + NADH + 2 H+.","definition_xrefs":["EC:1.2.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aminobutyraldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:19105","MetaCyc:AMINOBUTDEHYDROG-RXN","MetaCyc:1.5.1.35-RXN"],"synonyms":[{"name":"4-aminobutanal dehydrogenase activity","type":"related"},{"name":"4-aminobutanal:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"4-aminobutyraldehyde dehydrogenase activity","type":"related"},{"name":"ABAL dehydrogenase activity","type":"related"},{"name":"gamma-aminobutyraldehyde dehydroganase activity","type":"related"}],"termid":"GO:0019145"}


id: PBO:0081830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 764","termid":"PBO:0081830"}


id: PBO:0053699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 900","termid":"PBO:0053699"}


id: GO:0034495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the protein storage vacuole membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole lumen","termid":"GO:0000330"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"protein storage vacuole lumen","termid":"GO:0034495"}


id: GO:0009503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"thylakoid light-harvesting complex","termid":"GO:0009503"}


id: GO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation (obsolete GO:0003268)","synonyms":[{"name":"fibroblast growth factor receptor signaling pathway involved in regulation of second heart field cardioblast cell proliferation","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in regulation of secondary heart field cardioblast cell proliferation","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in regulation of secondary heart field cardioblast cell proliferation","type":"exact"}],"termid":"GO:0003268"}


id: PBO:0052817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 83","termid":"PBO:0052817"}


id: PBO:0069338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 598, pseudogene","termid":"PBO:0069338"}


id: PBO:0029306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_G0","termid":"PBO:0029306"}


id: FYPO:0007497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which fewer, larger nuclear exosome foci are present than normal. Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"aggregated nuclear exosome foci","synonyms":[{"name":"Mmi1 nuclear foci present in decreased numbers","type":"related"},{"name":"aggregated Mmi1 nuclear foci","type":"exact"},{"name":"aggregated nuclear exosome foci during mitotic cell cycle","type":"related"},{"name":"aggregated nuclear exosome foci during vegetative growth","type":"exact"},{"name":"nuclear exosome foci present in decreased numbers","type":"related"}],"termid":"FYPO:0007497"}


id: GO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUTP metabolic process","termid":"GO:0046080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dUTP biosynthetic process","synonyms":[{"name":"dUTP anabolism","type":"exact"},{"name":"dUTP biosynthesis","type":"exact"},{"name":"dUTP formation","type":"exact"},{"name":"dUTP synthesis","type":"exact"}],"termid":"GO:0006229"}


id: PBO:0086509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function","termid":"PBO:0086509"}


id: PBO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mrd1 (predicted)","termid":"PBO:0003625"}


id: GO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer in a bacterial endospore that lies under the exosporium, and is impermeable to many toxic molecules. The coat may also contain enzymes that are involved in endospore germination.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore coat","termid":"GO:0043593"}


id: PBO:0083025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; the YER186W-A was removed because it does not begin with a start codon or end with a stop codon, and has an in-frame internal stop codon (see the Locus History for more details)","termid":"PBO:0083025"}


id: GO:0033840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NDP-glucose + (1,4-alpha-D-glucosyl)n = NDP + (1,4-alpha-D-glucosyl)n+1.","definition_xrefs":["EC:2.4.1.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NDP-glucose-starch glucosyltransferase activity","secondary_identifiers":["RHEA:15873","MetaCyc:2.4.1.242-RXN"],"synonyms":[{"name":"GBSS","type":"related"},{"name":"GBSSI","type":"related"},{"name":"GBSSII","type":"related"},{"name":"NDP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"NDPglucose-starch glucosyltransferase activity","type":"related"},{"name":"granule-bound starch synthase I activity","type":"related"},{"name":"granule-bound starch synthase II activity","type":"related"},{"name":"granule-bound starch synthase activity","type":"related"},{"name":"starch granule-bound nucleoside diphosphate glucose-starch glucosyltransferase activity","type":"related"},{"name":"starch synthase II activity","type":"related"},{"name":"waxy protein","type":"related"}],"termid":"GO:0033840"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: FYPO:0008264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during a cellular response to  oxidative stress.","definition_xrefs":["PMID:24498240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished protein kinase activity in response to oxidative stress","termid":"FYPO:0008264"}


id: GO:1904462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["PMID:26116408","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"saponin catabolic process","termid":"GO:0016136"},{"relation_name":"is_a","term_name":"beta-glucoside catabolic process","termid":"GO:1901805"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside catabolic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside breakdown","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside catabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside degradation","type":"exact"}],"termid":"GO:1904462"}


id: GO:1990472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dual-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) where piRNAs originate from both DNA strands via noncanonical transcription.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"piRNA dual-strand cluster binding","termid":"GO:1990472"}


id: PBO:0078918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 7-1","termid":"PBO:0078918"}


id: GO:2000444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 21 signaling pathway","termid":"GO:2000443"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"negative regulation of TLR21 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000444"}


id: PBO:0041076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 interacting helicase 1","termid":"PBO:0041076"}


id: PBO:0045459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal inhibitory axon guidance protein","termid":"PBO:0045459"}


id: PBO:0086840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with sequence similar to hydroxyacid dehydrogenases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086840"}


id: PBO:0089955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta (WD repeat) subunit Git5","termid":"PBO:0089955"}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: GO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits, that lead to the increased affinity of the integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:14754902","PMID:12213832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"integrin activation","synonyms":[{"name":"integrin complex activation","type":"exact"},{"name":"integrin complex assembly","type":"exact"}],"termid":"GO:0033622"}


id: PBO:0076670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2C","termid":"PBO:0076670"}


id: GO:1904725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any TFIIB-class transcription factor binding that is involved in negative regulation of DNA-templated transcription.","definition_xrefs":["PMID:12461786","GOC:rb","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIB-class transcription factor binding involved in negative regulation of transcription (obsolete GO:1904725)","synonyms":[{"name":"TFIIB-class transcription factor binding involved in down regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in downregulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in downregulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in inhibition of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of gene-specific transcription","type":"related"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in negative regulation of transcription, DNA-templated","type":"exact"},{"name":"TFIIB-class transcription factor binding involved in transcription repressor activity","type":"related"}],"termid":"GO:1904725"}


id: GO:0031624
data:
  {"annotated_genes":["SJAG_01533","SJAG_00033","SJAG_00435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73234,73400,76450],"is_not":false,"summary":null,"term":"GO:0031624"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin conjugating enzyme, any of the E2 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme binding","termid":"GO:0044390"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00435":null,"SJAG_01533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031624","terms_by_termid":{"GO:0031624":null}}


id: GO:1901604
data:
  {"annotated_genes":["SJAG_02780","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70808,88165],"is_not":false,"summary":null,"term":"GO:1901604"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dethiobiotin from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dethiobiotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1901604","terms_by_termid":{"GO:1901604":null}}


id: GO:0061792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.","definition_xrefs":["PMID:16618809","GOC:bf","GOC:PARL","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule maturation","termid":"GO:0061792"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_import_into_nucleus_during_vegetative_growth","termid":"PBO:0035848"}


id: GO:0102927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-chaconine + UDP-L-rhamnose = H+ + alpha-chaconine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-chaconine rhamnosyltransferase activity (obsolete GO:0102927)","termid":"GO:0102927"}


id: GO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucarolactone + sinapoyl-CoA = O-sinapoylglucarolactone + CoA.","definition_xrefs":["MetaCyc:2.3.1.132-RXN","EC:2.3.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucarolactone O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:14261"],"synonyms":[{"name":"sinapoyl-CoA:glucarolactone O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047171"}


id: PR:O74541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C777.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.02","synonyms":[{"name":"Spom972h-SPCC777.02","type":"exact"}],"termid":"PR:O74541"}


id: GO:0014702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the sarcoplasmic reticulum membrane that contains calcium pumps and is devoted to calcium uptake. The free sarcoplasmic reticulum membrane consists of the longitudinal sarcoplasmic reticulum membrane and the non-junctional region of the terminal cisterna membrane.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"free sarcoplasmic reticulum membrane","termid":"GO:0014702"}


id: GO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of blood coagulation factors Va and VIIIa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete protein C (activated) activity (obsolete GO:0003808)","synonyms":[{"name":"GSAPC","type":"related"},{"name":"activated blood coagulation factor XIV activity","type":"related"},{"name":"activated protein C","type":"related"},{"name":"autoprothrombin II-A","type":"related"},{"name":"autoprothrombin IIA activity","type":"related"},{"name":"blood-coagulation factor XIVa","type":"related"},{"name":"protein C (activated) activity","type":"exact"},{"name":"protein Ca","type":"related"}],"termid":"GO:0003808"}


id: GO:0032099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to food","termid":"GO:0032096"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of appetite","synonyms":[{"name":"appetite suppression","type":"related"},{"name":"down regulation of appetite","type":"exact"},{"name":"down-regulation of appetite","type":"exact"},{"name":"downregulation of appetite","type":"exact"},{"name":"inhibition of appetite","type":"narrow"},{"name":"negative regulation of hunger","type":"related"}],"termid":"GO:0032099"}


id: FYPO:0005760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells adhere to each other more strongly or to a greater extent than normal.","definition_xrefs":["GO:0098610","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased cell-cell adhesion","synonyms":[{"name":"increased adhesion between unicellular organisms","type":"exact"},{"name":"increased cell-cell adhesion during mitotic cell cycle","type":"related"},{"name":"increased cell-cell adhesion during vegetative growth","type":"exact"}],"termid":"FYPO:0005760"}


id: GO:0032770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monooxygenase activity","synonyms":[{"name":"activation of monooxygenase activity","type":"narrow"},{"name":"stimulation of monooxygenase activity","type":"narrow"},{"name":"up regulation of monooxygenase activity","type":"exact"},{"name":"up-regulation of monooxygenase activity","type":"exact"},{"name":"upregulation of monooxygenase activity","type":"exact"}],"termid":"GO:0032770"}


id: PBO:0027033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0027033"}


id: MOD:00078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N(omega)-methyl-L-arginine.","definition_xrefs":["PubMed:11875433","PubMed:2426402","PubMed:5128665","RESID:AA0069","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated L-arginine","termid":"MOD:00414"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"omega-N-methyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-[(imino(methylamino)methyl)amino]pentanoic acid","type":"exact"},{"name":"MOD_RES Omega-N-methylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"NG-methylarginine","type":"exact"},{"name":"NoMeArg","type":"exact"},{"name":"omega-N-methyl-L-arginine","type":"exact"},{"name":"omega-N-methylated L-arginine","type":"exact"}],"termid":"MOD:00078"}


id: PBO:0085752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; related to and functionally redundant with Elm1p and Sak1p for the phosphorylation and activation of Snf1p; functionally orthologous to LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; TOS3 has a paralog, SAK1, that arose from the whole genome duplication","termid":"PBO:0085752"}


id: PBO:0081240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8 divergent transcript","termid":"PBO:0081240"}


id: PBO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP58 divergent transcript","termid":"PBO:0042850"}


id: SO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A locatable feature on a transcript that is edited.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_transcript_feature","synonyms":[{"name":"edited transcript feature","type":"exact"}],"termid":"SO:0000579"}


id: GO:0102926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + solanidine = H+ + gamma-chaconine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete solanidine glucosyltransferase activity (obsolete GO:0102926)","termid":"GO:0102926"}


id: PBO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 18","termid":"PBO:0070994"}


id: PBO:0028748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_containing_anucleate_spores","termid":"PBO:0028748"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: PBO:0088407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Cis4","termid":"PBO:0088407"}


id: PBO:0043780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A6","termid":"PBO:0043780"}


id: PBO:0073843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A2","termid":"PBO:0073843"}


id: PBO:0002759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, Elf1 family (predicted)","termid":"PBO:0002759"}


id: GO:0004996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyroid-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thyroid-stimulating hormone receptor activity","secondary_identifiers":["Wikipedia:Thyrotropin_receptor"],"synonyms":[{"name":"TSH receptor activity","type":"exact"},{"name":"thyroid stimulating hormone receptor activity","type":"exact"},{"name":"thyrotropin receptor","type":"exact"}],"termid":"GO:0004996"}


id: GO:0030489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete processing of 27S pre-rRNA (obsolete GO:0030489)","synonyms":[{"name":"processing of 27S pre-rRNA","type":"exact"}],"termid":"GO:0030489"}


id: PBO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVIII alpha 1 chain","termid":"PBO:0043586"}


id: PBO:0064496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR1H antisense, pseudogene","termid":"PBO:0064496"}


id: GO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zymosterol, (5alpha-cholesta-8,24-dien-3beta-ol).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol metabolic process","termid":"GO:0016125"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zymosterol metabolic process","termid":"GO:0036196"}


id: PR:P36615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase csk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.06c","synonyms":[{"name":"CAK-activating kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CAKAK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csk1","type":"exact"}],"termid":"PR:P36615"}


id: FYPO:0004115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with abnormal size, shape, or structure and a nucleus that is larger than normal.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"enlarged nucleus during vegetative growth","termid":"FYPO:0000344"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, abnormal septum morphology","termid":"FYPO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0002403","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, abnormal septum morphology, enlarged nucleus","synonyms":[{"name":"inviable after spore germination, undivided cell, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"inviable after spore germination, without cell division, abnormal septum formation, enlarged nucleus","type":"exact"},{"name":"inviable following spore germination, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"inviable germinated spore, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"},{"name":"lethal after spore germination, without cell division, abnormal septum morphology, enlarged nucleus","type":"exact"}],"termid":"FYPO:0004115"}


id: GO:0019216
data:
  {"annotated_genes":["SJAG_02104","SJAG_03130","SJAG_02044","SJAG_02641","SJAG_01187","SJAG_01906","SJAG_04018","SJAG_03940","SJAG_02380","SJAG_04092","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100690,114106],"is_not":false,"summary":null,"term":"GO:0019216"},{"annotations":[89986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[107447,111540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105808,108821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"},{"annotations":[105928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[105929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101912,84704,84703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01307":null,"SJAG_01906":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_02641":null,"SJAG_03130":null,"SJAG_03940":null,"SJAG_04018":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of lipid metabolism","type":"exact"}],"termid":"GO:0019216","terms_by_termid":{"GO:0010895":null,"GO:0019216":null,"GO:0032443":null,"GO:0045540":null,"GO:0045717":null,"GO:0070452":null,"GO:0071072":null,"GO:2001211":null}}


id: PBO:0081862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF793 antisense RNA 1 (head to head)","termid":"PBO:0081862"}


id: GO:0006647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidyl-N-monomethylethanolamine (PMME), a derivative of phosphatidylethanolamine with a methylated amine group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine biosynthetic process","termid":"GO:0006646"},{"relation_name":"is_a","term_name":"phosphatidyl-N-monomethylethanolamine metabolic process","termid":"GO:0046468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidyl-N-monomethylethanolamine biosynthetic process","synonyms":[{"name":"PMME biosynthesis","type":"exact"},{"name":"PMME biosynthetic process","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine anabolism","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine biosynthesis","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine formation","type":"exact"},{"name":"phosphatidyl-N-monomethylethanolamine synthesis","type":"exact"}],"termid":"GO:0006647"}


id: PBO:0070372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 10","termid":"PBO:0070372"}


id: GO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"},{"relation_name":"is_a","term_name":"establishment of apical/basal cell polarity","termid":"GO:0035089"},{"relation_name":"is_a","term_name":"establishment or maintenance of epithelial cell apical/basal polarity","termid":"GO:0045197"},{"relation_name":"is_a","term_name":"establishment of epithelial cell polarity","termid":"GO:0090162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"}


id: MOD:00225
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(6-FMN)-L-cysteine.","definition_xrefs":["PubMed:1551870","RESID:AA0220","PubMed:10869173","PubMed:620783","Unimod:409#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(6-FMN)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-[6-riboflavin 5'-dihydrogen phosphate]sulfanylpropanoic acid","type":"exact"},{"name":"6-[S-cysteinyl]FMN","type":"exact"},{"name":"6-[S-cysteinyl]flavin mononucleotide","type":"exact"},{"name":"FMNH","type":"related"},{"name":"MOD_RES S-6-FMN cysteine","type":"exact"},{"name":"S-(6-FMN)-L-cysteine","type":"exact"},{"name":"S6FMNCys","type":"exact"},{"name":"flavin mononucleotide","type":"related"}],"termid":"MOD:00225"}


id: GO:1905227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GO_REF:0000058","PMID:15659068","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905227)","synonyms":[{"name":"down regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"down-regulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"downregulation of adhesion of symbiont to host epithelial cell","type":"exact"},{"name":"inhibition of adhesion of symbiont to host epithelial cell","type":"narrow"}],"termid":"GO:1905227"}


id: GO:0033903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endohydrolysis of 1,3- or 1,4-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-1,3(4)-beta-glucanase activity (obsolete GO:0033903)","synonyms":[{"name":"endo-1,3(4)-beta-glucanase activity","type":"exact"}],"termid":"GO:0033903"}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:1900754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a 4-hydroxyphenylacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:9315705","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyphenylacetate transport","synonyms":[{"name":"(4-hydroxyphenyl)acetate transport","type":"exact"},{"name":"(p-hydroxyphenyl)acetate transport","type":"exact"},{"name":"2-(4-hydroxyphenyl)ethanoate transport","type":"exact"},{"name":"4-hydroxybenzeneacetate transport","type":"exact"}],"termid":"GO:1900754"}


id: FYPO:0002731
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115598],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"mononucleate","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate cell","type":"exact"}],"termid":"FYPO:0002731","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0027726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_at_high_temperature","termid":"PBO:0027726"}


id: PATO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being phosphorylated to a more than normal extent, or fully saturated with phosphate groups.","definition_xrefs":["Wikipedia:http://en.wiktionary.org/wiki/hyperphosphorylated"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"phosphorylated","termid":"PATO:0002220"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased phosphorylation","synonyms":[{"name":"hyperphosphorylated","type":"exact"}],"termid":"PATO:0002221"}


id: PBO:0039152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 7","termid":"PBO:0039152"}


id: GO:1900456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:10591965","PMID:15466424","PMID:12024013","PMID:16568252","PMID:10373537","PMID:9811878","GOC:TermGenie","GOC:dgf","PMID:8710886","PMID:9987114"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900456)","synonyms":[{"name":"regulation of colony morphology by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900456"}


id: FYECO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using nonpermissive temperature and subsequently released from the block.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature block and release","termid":"FYECO:0000291"}


id: PBO:0086483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative, non-essential component vacuolar ATPase; conserved in fungi; SWAT-GFP fusion protein localizes to vacuole membrane; partially overlaps the dubious genes YPR169W-A, YPR170W-A and YRP170C","termid":"PBO:0086483"}


id: GO:1903720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of I-kappaB phosphorylation.","definition_xrefs":["PMID:23675531","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of I-kappaB phosphorylation","termid":"GO:1903719"},{"relation_name":"negatively_regulates","term_name":"I-kappaB phosphorylation","termid":"GO:0007252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of I-kappaB phosphorylation","synonyms":[{"name":"down regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down regulation of IKB phosphorylation","type":"exact"},{"name":"down regulation of IkappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"down-regulation of I-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of IKB phosphorylation","type":"exact"},{"name":"down-regulation of IkappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"down-regulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"downregulation of I-kappaB phosphorylation","type":"exact"},{"name":"downregulation of IKB phosphorylation","type":"exact"},{"name":"downregulation of IkappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"downregulation of inhibitor of kappaB phosphorylation","type":"exact"},{"name":"inhibition of I-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of IKB phosphorylation","type":"narrow"},{"name":"inhibition of IkappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of NF-kappaB phosphorylation","type":"narrow"},{"name":"inhibition of inhibitor of kappaB phosphorylation","type":"narrow"},{"name":"negative regulation of IKB phosphorylation","type":"exact"},{"name":"negative regulation of IkappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of NF-kappaB phosphorylation","type":"exact"},{"name":"negative regulation of inhibitor of kappaB phosphorylation","type":"exact"}],"termid":"GO:1903720"}


id: PBO:0077614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 5","termid":"PBO:0077614"}


id: GO:1990619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 9 of the histone.","definition_xrefs":["PMID:25002536"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 deacetylation (obsolete GO:1990619)","termid":"GO:1990619"}


id: PBO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member A","termid":"PBO:0047155"}


id: GO:0070984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SET domain of a protein. SET domains are named after three Drosophila proteins that contain this domain: Su(var), E(z) and trithorax. SET domains are associated with histone lysine methylation.","definition_xrefs":["Pfam:PF00856","GOC:sart","PMID:12575990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"SET domain binding","synonyms":[{"name":"SET binding","type":"exact"}],"termid":"GO:0070984"}


id: GO:0150144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["PMID:26936882","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"negatively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD80 production","synonyms":[{"name":"negative regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150144"}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["PMID:11555656","PDB:1JJU","PMID:11717396","RESID:AA0313"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11140:SF0","PRO:DNx","OMA:SCHPO01110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: FYPO:0006641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic metaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic metaphase","type":"exact"},{"name":"normal protein localization to kinetochore during metaphase of mitosis","type":"exact"}],"termid":"FYPO:0006641"}


id: PBO:0087960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a highly basic C-terminal region","termid":"PBO:0087960"}


id: GO:0035555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a SLIT protein causes activation of the receptor, Roundabout (ROBO).","definition_xrefs":["GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete initiation of Roundabout signal transduction (obsolete GO:0035555)","synonyms":[{"name":"initiation of Roundabout signal transduction","type":"exact"}],"termid":"GO:0035555"}


id: FYPO:0004522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and branched (and septated) and is curved along the long axis, and undergoes one or two rounds of cell division and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, branched, elongated cell","termid":"FYPO:0004521"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, curved, elongated cell","termid":"FYPO:0004523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, branched, curved, elongated cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, elongated, curved and branched cell","type":"exact"},{"name":"inviable following spore germination, single or double cell division, branched, curved, elongated cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, branched, curved, elongated cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, branched, curved, elongated cell","type":"exact"}],"termid":"FYPO:0004522"}


id: FYPO:0007399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during vegetative growth","termid":"FYPO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic interphase","synonyms":[{"name":"normal protein localisation to kinetochore during interphase during vegetative growth","type":"exact"},{"name":"normal protein localization to kinetochore during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0007399"}


id: GO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRKB receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin TRK receptor binding","termid":"GO:0005167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neurotrophin TRKB receptor binding","synonyms":[{"name":"neurotrophin TRKB receptor ligand","type":"narrow"}],"termid":"GO:0005169"}


id: PBO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHDC7B divergent transcript","termid":"PBO:0052481"}


id: GO:0052844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-diphospho-1D-myo-inositol 1,2,4,5,6-pentakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate + phosphate + 2 H+.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol diphosphate pentakisphosphate diphosphatase activity","termid":"GO:0052842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity","secondary_identifiers":["MetaCyc:RXN-10978"],"termid":"GO:0052844"}


id: PBO:0085839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YDL144C is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0085839"}


id: GO:1905534
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_03591"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87843,89426,94975],"is_not":false,"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10467003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-leucine import across plasma membrane","termid":"GO:1905532"},{"relation_name":"positively_regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903130"],"synonyms":[{"name":"activation of L-leucine import into cell","type":"narrow"},{"name":"activation of leucine import into cell","type":"narrow"},{"name":"positive regulation of L-leucine import into cell","type":"exact"},{"name":"positive regulation of leucine import across plasma membrane","type":"broad"},{"name":"up regulation of L-leucine import into cell","type":"exact"},{"name":"upregulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905534","terms_by_termid":{"GO:1905534":null}}


id: PBO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocalcin delta","termid":"PBO:0060591"}


id: GO:0060847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate specification","termid":"GO:0060847"}


id: PBO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 1","termid":"PBO:0052129"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: GO:0180041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->4)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:15635094","PMID:11226175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"},{"relation_name":"is_a","term_name":"alpha-1,4-mannosyltransferase activity","termid":"GO:0051751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycolipid 1,4-alpha-mannosyltransferase activity","synonyms":[{"name":"GPI-MT-I activity","type":"exact"},{"name":"glycosylphosphatidylinositol-mannosyltransferase I","type":"exact"}],"termid":"GO:0180041"}


id: PBO:0110970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 antisense RNA 1","termid":"PBO:0110970"}


id: FYECO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiamine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiamine","termid":"FYECO:0000106"}


id: PBO:0028590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_growth","termid":"PBO:0028590"}


id: GO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inter-male aggressive behavior","synonyms":[{"name":"inter-male aggression","type":"exact"}],"termid":"GO:0002121"}


id: PBO:0085284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal NADP-dependent isocitrate dehydrogenase; catalyzes oxidation of isocitrate to alpha-ketoglutarate with the formation of NADP(H+), required for growth on unsaturated fatty acids; IDP3 has a paralog, IDP2, that arose from the whole genome duplication","termid":"PBO:0085284"}


id: GO:0051151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell differentiation","termid":"GO:0051148"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell differentiation","synonyms":[{"name":"down regulation of smooth muscle cell differentiation","type":"exact"},{"name":"down-regulation of smooth muscle cell differentiation","type":"exact"},{"name":"downregulation of smooth muscle cell differentiation","type":"exact"},{"name":"inhibition of smooth muscle cell differentiation","type":"narrow"}],"termid":"GO:0051151"}


id: PBO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spatial_extent_of_double-strand_break_processing","termid":"PBO:0035960"}


id: PBO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member M, pseudogene","termid":"PBO:0046988"}


id: GO:0006974
data:
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id: PBO:0090421
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id: PBO:0000173
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id: PBO:0053923
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id: PBO:0030999
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id: PBO:0090937
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id: PBO:0051841
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id: PBO:0049676
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id: PBO:0005116
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id: PR:O59701
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id: PBO:0067343
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id: PBO:0033816
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id: SO:0002112
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id: GO:1904161
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