# terms

id: FYPO:0002824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle","termid":"FYPO:0007863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle","synonyms":[{"name":"abnormal protein localisation to mitotic spindle","type":"exact"},{"name":"abnormal protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle during mitosis","type":"exact"},{"name":"abnormal protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0002824"}


id: PBO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_branching_relationship_with","termid":"PBO:0034099"}


id: GO:0075211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transmembrane receptor-mediated cAMP signaling in response to host (obsolete GO:0075211)","synonyms":[{"name":"regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host","type":"exact"},{"name":"regulation of transmembrane receptor-mediated cAMP signal transduction in response to host","type":"exact"},{"name":"regulation of transmembrane receptor-mediated cAMP signalling in response to host","type":"exact"}],"termid":"GO:0075211"}


id: PBO:0085607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in control of glucose-regulated gene expression; interacts with kinase Snf1p, glucose sensors Snf3p and Rgt2p, TATA-binding Spt15p; regulator of transcription factor Rgt1p; interactions with Pma1p appear to propagate [GAR+]; STD1 has a paralog, MTH1, that arose from the whole genome duplication","termid":"PBO:0085607"}


id: PBO:0075441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted protein acidic and cysteine rich","termid":"PBO:0075441"}


id: PBO:0113337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable but shows increased loss of mitochondrial genome and synthetic interaction with prohibitin (phb1); contains an intron; SWAT-GFP and mCherry fusion proteins localize to the mitochondria; localizes to the peroxisome in glucose; YER093C-A has a paralog, YBL059W, that arose from the whole genome duplication","termid":"PBO:0113337"}


id: PBO:0077172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 1","termid":"PBO:0077172"}


id: PBO:0055983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 1","termid":"PBO:0055983"}


id: PBO:0085717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Snd1p, Pho88p/Snd3p and Sec61p-translocon subunits; can compensate for loss of SRP; role in the late endosome-vacuole interface; putative role in secretory protein quality control","termid":"PBO:0085717"}


id: PBO:0029166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation","termid":"PBO:0029166"}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: PBO:0086191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to mammalian oxysterol-binding protein; contains ankyrin repeats and FFAT motif; interacts with ER anchor Scs2p at the nucleus-vacuole junction; regulated by sterol binding; SWH1 has a paralog, OSH2, that arose from the whole genome duplication","termid":"PBO:0086191"}


id: GO:0033390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane, from other compounds, including arginine, via the intermediate N-carbamoylputrescine; in this pathway, arginine is converted to agmatine, and agmatine is converted to putrescine in two single enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:PWY-43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"putrescine biosynthetic process from arginine","termid":"GO:0033388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"putrescine biosynthetic process from arginine via N-carbamoylputrescine","synonyms":[{"name":"putrescine anabolism from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine biosynthesis from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine formation from arginine via N-carbamoylputrescine","type":"exact"},{"name":"putrescine synthesis from arginine via N-carbamoylputrescine","type":"exact"}],"termid":"GO:0033390"}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: GO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of glycosidic bonds through a beta-elimination reaction on alginate, a linear polysaccharide consisting of guluronate (G) and mannuronate (M) as the monomer constituents. An oligoalginate is a linear polymer of two, three or four units of (1->4)-alpha-L-guluronic acid and beta-D-mannuronic acid, releasing monosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["GOC:mengo_curators","PMID:20925655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exo-oligoalginate lyase activity","secondary_identifiers":["EC:4.2.2.26"],"termid":"GO:0052764"}


id: GO:1905602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis involved in cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:22848640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular cholesterol transport","termid":"GO:0032385"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:1905600"},{"relation_name":"positively_regulates","term_name":"receptor-mediated endocytosis involved in cholesterol transport","termid":"GO:0090118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor-mediated endocytosis involved in cholesterol transport","synonyms":[{"name":"activation of receptor-mediated endocytosis involved in cholesterol transport","type":"narrow"},{"name":"activation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis involved in intracellular cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"related"}],"termid":"GO:1905602"}


id: GO:0071251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to silicon dioxide","termid":"GO:0034021"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to silicon dioxide","synonyms":[{"name":"cellular response to silica","type":"exact"},{"name":"cellular response to silox","type":"exact"}],"termid":"GO:0071251"}


id: GO:0010920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inositol phosphate biosynthetic process","synonyms":[{"name":"negative regulation of inositol phosphate biosynthesis","type":"exact"}],"termid":"GO:0010920"}


id: SO:0001526
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where the final nucleotide assignment is different from that given by the base caller due to an improvement that replaces a mistake.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base_call_error_correction","synonyms":[{"name":"base call error correction","type":"related"}],"termid":"SO:0001526"}


id: GO:0071115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to endostatin, the NC1 domain of the alpha1 chain of type XVIII collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha5-beta1 integrin-endostatin complex","synonyms":[{"name":"ITGA5-ITGB1-CAL4A3 complex","type":"narrow"}],"termid":"GO:0071115"}


id: PBO:0063638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin family member 4","termid":"PBO:0063638"}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0063882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class L","termid":"PBO:0063882"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: PBO:0085485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processing alpha glucosidase I; ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress","termid":"PBO:0085485"}


id: GO:0000170
data:
  {"annotated_genes":["SJAG_04913","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87910,108617],"is_not":false,"summary":null,"term":"GO:0000170"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of sphingolipid long chain bases.","definition_xrefs":["PMID:9556590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sphingosine hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-428260"],"termid":"GO:0000170","terms_by_termid":{"GO:0000170":null}}


id: GO:0004015
data:
  {"annotated_genes":["SJAG_00673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75139],"is_not":false,"summary":null,"term":"GO:0004015"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-amino-7-oxononanoate + S-adenosyl-L-methionine(1+) = 7,8-diaminononanoate + S-adenosyl-4-methylthio-2-oxobutanoate.","definition_xrefs":["EC:2.6.1.62","RHEA:16861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"adenosylmethionine-8-amino-7-oxononanoate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DAPASYN-RXN","KEGG_REACTION:R03231"],"synonyms":[{"name":"7,8-diamino-pelargonic acid aminotransferase activity","type":"related"},{"name":"7,8-diaminonanoate transaminase activity","type":"related"},{"name":"7,8-diaminononanoate aminotransferase activity","type":"related"},{"name":"7,8-diaminononanoate transaminase activity","type":"related"},{"name":"7,8-diaminopelargonic acid aminotransferase activity","type":"related"},{"name":"7-keto-8-aminopelargonic acid","type":"related"},{"name":"7-keto-8-aminopelargonic acid aminotransferase activity","type":"related"},{"name":"DAPA aminotransferase activity","type":"related"},{"name":"DAPA transaminase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosyl methionine-8-amino-7-oxononanoate transaminase activity","type":"exact"},{"name":"adenosylmethionine--8-amino-7-oxononanoate aminotransferase activity","type":"related"},{"name":"adenosylmethionine-8-amino-7-oxononanoate aminotransferase activity","type":"exact"},{"name":"diaminopelargonate synthase activity","type":"related"}],"termid":"GO:0004015","terms_by_termid":{"GO:0004015":null}}


id: GO:0072565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from an endothelial cell.","definition_xrefs":["GOC:BHF","PMID:16373184","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial microparticle formation","synonyms":[{"name":"endothelial microparticle generation","type":"exact"},{"name":"endothelial microparticle release","type":"exact"}],"termid":"GO:0072565"}


id: GO:0102487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dUTP + 2 H2O = dUMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dUTP phosphohydrolase activity (obsolete GO:0102487)","termid":"GO:0102487"}


id: PBO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.19","termid":"PBO:0004126"}


id: PBO:0079089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-2","termid":"PBO:0079089"}


id: PBO:0051230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-28-1 (pseudogene)","termid":"PBO:0051230"}


id: PBO:0058783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7152","termid":"PBO:0058783"}


id: GO:0070072
data:
  {"annotated_genes":["SJAG_01939","SJAG_04454","SJAG_00301","SJAG_06514","SJAG_05306"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98080,106242,109196,110263,114362],"is_not":false,"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex assembly","termid":"GO:0070070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"broad"},{"name":"V-ATPase complex assembly","type":"broad"}],"termid":"GO:0070072","terms_by_termid":{"GO:0070072":null}}


id: SO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specialized region in the genomes of some yeast and fungi, the genes of which regulate mating type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_group","termid":"SO:0005855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Mating-type_region"],"synonyms":[{"name":"mating type region","type":"exact"}],"termid":"SO:0001789"}


id: FYPO:0001353
data:
  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id: PBO:0027377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027377"}


id: PBO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 6","termid":"PBO:0052358"}


id: PBO:0030670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_replication","termid":"PBO:0030670"}


id: PBO:0084595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL017W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YJL016W","termid":"PBO:0084595"}


id: GO:0050456
data:
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id: SO:0002111
data:
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id: PBO:0039858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 23","termid":"PBO:0039858"}


id: GO:1900999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitrobenzene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00923","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitrobenzene metabolic process","termid":"GO:0018916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene biosynthetic process","synonyms":[{"name":"nitrobenzene anabolism","type":"exact"},{"name":"nitrobenzene biosynthesis","type":"exact"},{"name":"nitrobenzene formation","type":"exact"},{"name":"nitrobenzene synthesis","type":"exact"}],"termid":"GO:1900999"}


id: GO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"negatively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron differentiation","synonyms":[{"name":"down regulation of neuron differentiation","type":"exact"},{"name":"down-regulation of neuron differentiation","type":"exact"},{"name":"downregulation of neuron differentiation","type":"exact"},{"name":"inhibition of neuron differentiation","type":"narrow"}],"termid":"GO:0045665"}


id: FYPO:0000048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which invasive growth does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete invasive growth abolished (obsolete FYPO:0000048)","synonyms":[{"name":"absent invasive growth","type":"exact"},{"name":"invasive growth abolished during vegetative growth","type":"exact"},{"name":"invasive growth: absent","type":"related"}],"termid":"FYPO:0000048"}


id: PBO:0040501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase B","termid":"PBO:0040501"}


id: GO:1904309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:21597460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cordycepin","synonyms":[{"name":"response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904309"}


id: PBO:0089598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase Thi201","termid":"PBO:0089598"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: GO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of a molecular chaperone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone activator activity (obsolete GO:0030189)","synonyms":[{"name":"chaperone activator activity","type":"exact"}],"termid":"GO:0030189"}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: PR:Q9UQX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A superoxide dismutase [Mn], mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01332","PANTHER:PTHR11404:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase [Mn], mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.01","secondary_identifiers":["UniProtKB:Q9UQX0"],"synonyms":[{"name":"Spom972h-SOD2","type":"exact"}],"termid":"PR:Q9UQX0"}


id: PR:Q10149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.02c","synonyms":[{"name":"Spom972h-grh1","type":"exact"}],"termid":"PR:Q10149"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: PBO:0076182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 6B member 2, pseudogene","termid":"PBO:0076182"}


id: GO:0032900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of a neurotrophin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"neurotrophin production","termid":"GO:0032898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurotrophin production","synonyms":[{"name":"down regulation of neurotrophin production","type":"exact"},{"name":"down-regulation of neurotrophin production","type":"exact"},{"name":"downregulation of neurotrophin production","type":"exact"},{"name":"inhibition of neurotrophin production","type":"narrow"}],"termid":"GO:0032900"}


id: FYPO:0006606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows an abnormal temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal dynamic protein localization pattern","synonyms":[{"name":"abnormal dynamic pattern of protein localization","type":"exact"},{"name":"abnormal dynamic protein localisation pattern","type":"exact"},{"name":"abnormal protein exchange","type":"exact"},{"name":"abnormal protein turnover","type":"exact"},{"name":"abnormal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006606"}


id: PBO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.-","termid":"PBO:0002100"}


id: PBO:0087498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin; human homolog ELP3 can partially complement yeast elp3 null mutant","termid":"PBO:0087498"}


id: PBO:0042347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD82 antisense RNA 1","termid":"PBO:0042347"}


id: PBO:0078406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 1-2","termid":"PBO:0078406"}


id: PBO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 48","termid":"PBO:0048337"}


id: GO:0045025
data:
  {"annotated_genes":["SJAG_02991"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95047],"is_not":false,"summary":null,"term":"GO:0045025"}]},"cv_name":"cellular_component","definition":"A mitochondrial protein complex with 3' to 5' exoribonuclease activity that participates in intron-independent turnover and processing of mitochondrial transcripts. In humans, the mitochondrial degradosome is a pentameric complex, and in yeast it exists as a heterodimer.","definition_xrefs":["PMID:10397341","PMID:9829834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic exosome (RNase complex)","termid":"GO:0000177"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial degradosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mtEXO","type":"exact"}],"termid":"GO:0045025","terms_by_termid":{"GO:0045025":null}}


id: PBO:0088637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn6","termid":"PBO:0088637"}


id: PR:O14094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein prune that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.11","secondary_identifiers":["UniProtKB:O14094"],"synonyms":[{"name":"ExopolyPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Metaphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRUNE","type":"exact"}],"termid":"PR:O14094"}


id: SO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by proteomics data.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_peptide_spectrum_match","termid":"SO:0002071"}


id: PR:Q9UTL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A co-chaperone protein HscB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J-type co-chaperone jac1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.08","secondary_identifiers":["UniProtKB:Q9UTL6"],"synonyms":[{"name":"J-type accessory chaperone 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hscB","type":"exact"}],"termid":"PR:Q9UTL6"}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: PBO:0109263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrograde transport protein, Golgi to ER, Erd1/Gmn2","termid":"PBO:0109263"}


id: GO:0019136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2'-deoxynucleoside = ADP + 2'-deoxynucleoside 5'-phosphate.","definition_xrefs":["EC:2.7.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"deoxynucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.145-RXN","RHEA:12140","Reactome:R-HSA-74207"],"synonyms":[{"name":"ATP:deoxynucleoside 5'-phosphotransferase activity","type":"related"},{"name":"D. melanogaster deoxynucleoside kinase activity","type":"related"},{"name":"Dm-dNK","type":"related"},{"name":"Ms-dNK activity","type":"related"},{"name":"ms-dNK","type":"related"},{"name":"multifunctional deoxynucleoside kinase activity","type":"related"},{"name":"multispecific deoxynucleoside kinase activity","type":"related"},{"name":"multisubstrate deoxyribonucleoside kinase activity","type":"related"}],"termid":"GO:0019136"}


id: PBO:0111860
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin homology (CH) domain","termid":"PBO:0111860"}


id: GO:0035194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A posttranscriptional gene silencing pathway in which regulatory RNAs elicit silencing of specific target genes, either by mRNA destabilization or inhibition of translation.","definition_xrefs":["PMID:15066275","PMID:33184244","PMID:32885814","PMID:11713190","PMID:18771919","PMID:11201747","PMID:15020054","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional gene silencing","termid":"GO:0016441"},{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulatory ncRNA-mediated post-transcriptional gene silencing","secondary_identifiers":["Wikipedia:RNA_interference","GO:0016246"],"synonyms":[{"name":"PTGS","type":"broad"},{"name":"RNA interference","type":"broad"},{"name":"RNA-dependent post-transcriptional gene silencing","type":"exact"},{"name":"RNA-mediated post-transcriptional gene silencing","type":"exact"},{"name":"RNA-mediated posttranscriptional gene silencing","type":"exact"},{"name":"RNAi","type":"broad"},{"name":"cosuppression","type":"related"},{"name":"ncRNA-mediated post-transcriptional gene silencing","type":"exact"},{"name":"post-transcriptional gene silencing by RNA","type":"related"},{"name":"posttranscriptional gene silencing by RNA","type":"exact"},{"name":"quelling","type":"related"}],"termid":"GO:0035194"}


id: PBO:0065655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type F","termid":"PBO:0065655"}


id: MOD:01078
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to S-(2-aminoethyl)-3-methylcysteine.","definition_xrefs":["Unimod:472#T","PubMed:12923550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)-3-methylcysteine (Thr)","synonyms":[{"name":"2-amino-3-(2-aminoethyl)sulfanyl-3-methylbutanoic acid","type":"exact"},{"name":"AEC-MAEC","type":"related"},{"name":"S-aminoethyl-3-methylcysteine","type":"exact"},{"name":"beta-methylaminoethylcysteine","type":"related"}],"termid":"MOD:01078"}


id: PBO:0111771
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box","termid":"PBO:0111771"}


id: GO:0031470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle consisting of a proteinaceous coat and enzymes for the fixation of CO2. It augments the concentration of CO2 in the vicinity of RuBisCO to increase the efficiency of CO2 fixation under atmospheric conditions.","definition_xrefs":["GOC:js","PMID:8491708","PMID:28934381","PMID:8157606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"carboxysome","secondary_identifiers":["Wikipedia:Carboxysome"],"termid":"GO:0031470"}


id: GO:0035316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of non-sensory hairs. These hairs are polarized cellular extensions that cover much of the insect epidermis.","definition_xrefs":["PMID:11064425","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"hair cell differentiation","termid":"GO:0035315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-sensory hair organization","synonyms":[{"name":"non-sensory hair organization and biogenesis","type":"related"},{"name":"trichome organisation","type":"broad"},{"name":"trichome organization and biogenesis","type":"broad"}],"termid":"GO:0035316"}


id: PBO:0083207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL197C/UBP12","termid":"PBO:0083207"}


id: PBO:0049393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 8 (putative)","termid":"PBO:0049393"}


id: PBO:0069549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 820, pseudogene","termid":"PBO:0069549"}


id: PBO:0056373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 8 interacting protein 1 pseudogene 1","termid":"PBO:0056373"}


id: PBO:0077650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 2","termid":"PBO:0077650"}


id: PBO:0075339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORCS3 antisense RNA 1","termid":"PBO:0075339"}


id: GO:0031491
data:
  {"annotated_genes":["SJAG_03128","SJAG_02416","SJAG_03945","SJAG_01653","SJAG_05192","SJAG_01046","SJAG_04670","SJAG_03997","SJAG_03982","SJAG_00914","SJAG_02401","SJAG_03694","SJAG_02348","SJAG_01146","SJAG_04879","SJAG_03905","SJAG_00925","SJAG_00913","SJAG_01823"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88482,90191,92265,93197,99006,99330,99666,103962,104856,104861,106027,106305,107353,109378,109685,111471,113085,113186,113329],"is_not":false,"summary":null,"term":"GO:0031491"}]},"cv_name":"molecular_function","definition":"Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01046":null,"SJAG_01146":null,"SJAG_01653":null,"SJAG_01823":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_03128":null,"SJAG_03694":null,"SJAG_03905":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_05192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleosome binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031491","terms_by_termid":{"GO:0031491":null}}


id: PR:O14135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.09","synonyms":[{"name":"Spom972h-set8","type":"exact"}],"termid":"PR:O14135"}


id: PATO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nucleate quality inhering in a bearer by virtue of the bearer's having no nucleus.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleate quality","termid":"PATO:0001404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anucleate","termid":"PATO:0001405"}


id: PBO:0017913
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mcm2, Mcm4, and Mcm7 associate with chromatin simultaneously","termid":"PBO:0017913"}


id: PBO:0043769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX18","termid":"PBO:0043769"}


id: GO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via the brain-derived neurotrophic factor receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brain-derived neurotrophic factor receptor signaling pathway","termid":"GO:0031547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"regulation of BDNF receptor signaling pathway","type":"exact"},{"name":"regulation of BDNF receptor signalling pathway","type":"exact"},{"name":"regulation of brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031548"}


id: GO:1905795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to puromycin","termid":"GO:1905794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to puromycin","synonyms":[{"name":"cellular response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905795"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PBO:0070510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 9","termid":"PBO:0070510"}


id: PBO:0027157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_arginine_level","termid":"PBO:0027157"}


id: PBO:0043410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 7","termid":"PBO:0043410"}


id: GO:0140918
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core region of the centrosome, a layered structure containing proteins, surrounded by the centrosomal corona. The core duplicates once per cell cycle at the G2/M transition when two outer layers form the mitotic spindle poles.","definition_xrefs":["PMID:28104305","PMID:30413081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosomal core","synonyms":[{"name":"centrosome core","type":"exact"}],"termid":"GO:0140918"}


id: PR:Q96VG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.19 gene.","definition_xrefs":["UniProtKB:Q96VG0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.19","synonyms":[{"name":"Spom972h-SPBC16G5.19","type":"exact"}],"termid":"PR:Q96VG0"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: PBO:0078004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 4","termid":"PBO:0078004"}


id: FYPO:0000798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to anisomycin. Cells stop growing (and may die) at a concentration of anisomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to anisomycin","synonyms":[{"name":"hypersensitive to anisomycin","type":"exact"},{"name":"sensitive to anisomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to anisomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000798"}


id: GO:0042641
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"Any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"actomyosin","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actomyosin complex","type":"exact"},{"name":"actomyosin structure","type":"exact"}],"termid":"GO:0042641","terms_by_termid":{"GO:0001725":null}}


id: GO:1903693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic G1 cell cycle arrest in response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie","PMID:15713656","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation (obsolete GO:1903693)","synonyms":[{"name":"regulation of G1 mitotic cell cycle arrest in response to nitrogen starvation","type":"exact"}],"termid":"GO:1903693"}


id: PBO:0060092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 39","termid":"PBO:0060092"}


id: PR:O74339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam41 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.06c","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tam41","type":"exact"},{"name":"TAM41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial translocator assembly and maintenance protein 41 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74339"}


id: GO:1990393
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, at least composed of CUL7, CCDC8 and OBSL1, that is required for maintaining microtubule and genome integrity.","definition_xrefs":["PMID:24793695","PMID:24793696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"3M complex","termid":"GO:1990393"}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: PR:O59823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05013","PANTHER:PTHR11671:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.03","secondary_identifiers":["UniProtKB:O59823"],"synonyms":[{"name":"Spom972h-ATP6V1D","type":"exact"},{"name":"V-ATPase subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59823"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_04479","SJAG_00279","SJAG_02609","SJAG_02737","SJAG_01993","SJAG_02761","SJAG_02566","SJAG_02700","SJAG_02624","SJAG_01268","SJAG_00856","SJAG_03540","SJAG_01215","SJAG_01756","SJAG_02245","SJAG_02886","SJAG_07018","SJAG_03835","SJAG_04100","SJAG_01894","SJAG_00677","SJAG_04982","SJAG_00521","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93826,94932,89928,88422,64200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[113008],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[88423,84398,110389,94993],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[106661,104929,105690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[96179,96480,102516,113013,113250,97082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114706,97083],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[86794,97845,85955,98834,101242],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93829,110392],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0042989":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0015150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fucose from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fucose transmembrane transporter activity","termid":"GO:0015150"}


id: PBO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4C","termid":"PBO:0044875"}


id: MOD:00884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-2-aminoethylcysteine.","definition_xrefs":["PubMed:18688235","PubMed:1175632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-aminoethylcysteine (Cys)","synonyms":[{"name":"4-thialysine","type":"exact"},{"name":"L-cysteine aziridine adduct","type":"exact"},{"name":"S-(2-aminoethyl)-L-cysteine","type":"exact"}],"termid":"MOD:00884"}


id: PBO:0077754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 6","termid":"PBO:0077754"}


id: PBO:0087516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterotrimeric Replication Protein A (RPA); RPA is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination; RPA protects against inappropriate telomere recombination, and upon telomere uncapping, prevents cell proliferation by a checkpoint-independent pathway; in concert with Sgs1p-Top2p-Rmi1p, stimulates DNA catenation/decatenation activity of Top3p; protein abundance increases in response to DNA replication s","termid":"PBO:0087516"}


id: GO:0043574
data:
  {"annotated_genes":["SJAG_01854","SJAG_03781","SJAG_00891","SJAG_01165","SJAG_02619","SJAG_02797","SJAG_05315","SJAG_03324","SJAG_03440","SJAG_00326","SJAG_04763","SJAG_00702","SJAG_02997","SJAG_02034","SJAG_02693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106123,107466,62851,86346,86549,92574,101316,94333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[93060,99185,107927],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[97401,113366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[91532,107467,86541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peroxisomal transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0043574","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0080787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 7","termid":"PBO:0080787"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: PBO:0072119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 8","termid":"PBO:0072119"}


id: PBO:0090416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress transcription coactivator/ribosome recycling protein Oxs1","termid":"PBO:0090416"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01455","PANTHER:PTHR15139:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: PBO:0061502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurensin 1","termid":"PBO:0061502"}


id: PBO:0053367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 279","termid":"PBO:0053367"}


id: GO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar assembly (obsolete GO:0005479)","synonyms":[{"name":"vacuolar assembly","type":"exact"}],"termid":"GO:0005479"}


id: FYPO:0007656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is higher than normal at transcription start sites. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:33511417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nucleosome occupancy","termid":"FYPO:0007655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased nucleosome occupancy at transcription start site","synonyms":[{"name":"increased nucleosome occupancy at TSS","type":"exact"},{"name":"increased nucleosome occupancy at transcription start site during mitotic cell cycle","type":"related"},{"name":"increased nucleosome occupancy at transcription start site during vegetative growth","type":"exact"}],"termid":"FYPO:0007656"}


id: PBO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli rusA and ruvC","termid":"PBO:0017769"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: GO:1902569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activation of JAK (Janus Activated Kinase) kinase activity.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of Janus kinase activity","termid":"GO:0010533"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activation of Janus kinase activity","synonyms":[{"name":"down regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK1 protein","type":"narrow"},{"name":"down regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down regulation of activation of JAK2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"down-regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"down-regulation of activation of JAK1 protein","type":"narrow"},{"name":"down-regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"down-regulation of activation of JAK2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"},{"name":"downregulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"downregulation of activation of JAK1 protein","type":"narrow"},{"name":"downregulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"inhibition of activation of JAK1 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK1 protein","type":"narrow"},{"name":"inhibition of activation of JAK2 kinase activity","type":"narrow"},{"name":"inhibition of activation of JAK2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of JAK2 protein","type":"related"},{"name":"negative regulation of activation of JAK1 protein","type":"narrow"},{"name":"negative regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"negative regulation of activation of JAK2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of JAK2 protein","type":"related"}],"termid":"GO:1902569"}


id: PBO:0027587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_along_chromosome_arms","termid":"PBO:0027587"}


id: PBO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 10","termid":"PBO:0070831"}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:krc","PMID:20823909","PMID:24220498","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0120013","GO:0003674"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: PBO:0054497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1897","termid":"PBO:0054497"}


id: PBO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product was previously annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. This mapping was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034793"}


id: PBO:0003987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase Ppa2","termid":"PBO:0003987"}


id: GO:1904876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["PMID:17389648","GOC:BHF_telomere","GOC:rl","GOC:TermGenie","GO_REF:0000059","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA ligation","termid":"GO:0051107"},{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"},{"relation_name":"is_a","term_name":"regulation of DNA ligase activity","termid":"GO:1904875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA ligase activity","synonyms":[{"name":"down regulation of DNA ligase activity","type":"exact"},{"name":"down-regulation of DNA ligase activity","type":"exact"},{"name":"downregulation of DNA ligase activity","type":"exact"},{"name":"inhibition of DNA ligase activity","type":"narrow"}],"termid":"GO:1904876"}


id: PBO:0057458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 577","termid":"PBO:0057458"}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["RHEA:24120","EC:1.14.13.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN","KEGG_REACTION:R04256"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: SO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron that is the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_intron","synonyms":[{"name":"5' intron","type":"exact"},{"name":"5' intron sequence","type":"exact"},{"name":"five prime intron","type":"exact"}],"termid":"SO:0000190"}


id: GO:0018352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and pyridoxal-5-phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}


id: SO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between +20 and +30 relative to the TSS. Consensus sequence is CSARCSSAACGS. Tends to co-occur with INR motif (SO:0000014). Tends to not occur with DPE motif (SO:0000015) or DMv5 (SO:0001159).","definition_xrefs":["PMID:16858867","PMID:12537576:15231738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTE","synonyms":[{"name":"CSARCSSAACGS","type":"narrow"},{"name":"motif ten element","type":"exact"},{"name":"motif_ten_element","type":"exact"}],"termid":"SO:0001162"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["PMID:1480107","GOC:at","Wikipedia:Dinoflagellate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: GO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: CDP-acylglycerol + arachidonyl-CoA = CDP-diacylglycerol + CoA.","definition_xrefs":["EC:2.3.1.70","MetaCyc:2.3.1.70-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP-acylglycerol O-arachidonoyltransferase activity (obsolete GO:0047193)","synonyms":[{"name":"CDP-acylglycerol O-arachidonoyltransferase activity","type":"exact"},{"name":"CDP-acylglycerol O-arachidonyltransferase activity","type":"exact"},{"name":"CDPacylglycerol O-arachidonyltransferase activity","type":"related"},{"name":"arachidonoyl-CoA:CDP-acylglycerol O-arachidonoyltransferase activity","type":"related"},{"name":"arachidonyl-CoA:CDP-acylglycerol O-arachidonyltransferase activity","type":"related"}],"termid":"GO:0047193"}


id: GO:1904141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of microglial cell migration","synonyms":[{"name":"activation of microglial cell migration","type":"narrow"},{"name":"up regulation of microglial cell migration","type":"exact"},{"name":"up-regulation of microglial cell migration","type":"exact"},{"name":"upregulation of microglial cell migration","type":"exact"}],"termid":"GO:1904141"}


id: GO:2001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"}


id: GO:1905650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of shell calcification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:14648763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"is_a","term_name":"regulation of shell calcification","termid":"GO:1905648"},{"relation_name":"positively_regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of shell calcification","synonyms":[{"name":"activation of shell calcification","type":"narrow"},{"name":"up regulation of shell calcification","type":"exact"},{"name":"up-regulation of shell calcification","type":"exact"},{"name":"upregulation of shell calcification","type":"exact"}],"termid":"GO:1905650"}


id: PR:O94344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet802 gene.","definition_xrefs":["UniProtKB:O94344","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C1271.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.11","synonyms":[{"name":"Spom972h-pet802","type":"exact"}],"termid":"PR:O94344"}


id: PBO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEMIN7 pseudogene 1","termid":"PBO:0048533"}


id: PBO:0031557
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalytic_activity","termid":"PBO:0031557"}


id: PBO:0057550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664a","termid":"PBO:0057550"}


id: PBO:0054952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2366","termid":"PBO:0054952"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21730158","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: PBO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub2","termid":"PBO:0016534"}


id: PBO:0066465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3","termid":"PBO:0066465"}


id: PBO:0016051
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human cofactor E","termid":"PBO:0016051"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: FYECO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nanoparticles were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNP","synonyms":[{"name":"+ silver nanoparticles","type":"exact"}],"termid":"FYECO:0000353"}


id: GO:0140977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of acetone. These may include chemical modification, for example to methylglyoxal.","definition_xrefs":["PMID:26958851","PMID:22314896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of acetone","termid":"GO:0140977"}


id: PBO:0040648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 2B","termid":"PBO:0040648"}


id: PBO:0063190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 2","termid":"PBO:0063190"}


id: GO:0100058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phenotypic switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100058)","termid":"GO:0100058"}


id: SO:1000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a pyrimidine nucleotide, C or T, into a purine nucleotide, A or G.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine_to_purine_transversion","synonyms":[{"name":"pyrimidine to purine transversion","type":"exact"}],"termid":"SO:1000018"}


id: PBO:0088173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xylitol dehydrogenase; involved in utilization of xylose as a carbon source; not present in S288C, but located in a 65kb insertion on the right arm of chromosome XV in many wine strains such as EC1118 and AWRI1631","termid":"PBO:0088173"}


id: PBO:0088143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar serine-type carboxypeptidase; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; N-glycosylated","termid":"PBO:0088143"}


id: PBO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_mitotic_metaphase","termid":"PBO:0026732"}


id: GO:0004089
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109578],"is_not":false,"summary":null,"term":"GO:0004089"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogencarbonate + H+ = CO2 + H2O.","definition_xrefs":["EC:4.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbonate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1237081","Reactome:R-HSA-1475026","Reactome:R-HSA-1475028","Reactome:R-HSA-1475436","RHEA:10748","Reactome:R-HSA-1475025","MetaCyc:RXN0-5224","Reactome:R-HSA-1475017","Reactome:R-HSA-1475032","Reactome:R-HSA-1475022","Reactome:R-HSA-1237045","Reactome:R-HSA-1475435","Reactome:R-HSA-1237059","Reactome:R-HSA-1237047"],"synonyms":[{"name":"anhydrase activity","type":"related"},{"name":"carbonate anhydrase activity","type":"related"},{"name":"carbonate hydro-lyase (carbon-dioxide-forming)","type":"related"},{"name":"carbonate hydro-lyase activity","type":"related"},{"name":"carbonic acid anhydrase activity","type":"related"},{"name":"carbonic anhydrase A","type":"related"},{"name":"carbonic anhydrase activity","type":"exact"},{"name":"carbonic dehydratase activity","type":"related"},{"name":"carboxyanhydrase activity","type":"related"}],"termid":"GO:0004089","terms_by_termid":{"GO:0004089":null}}


id: GO:0047214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin-3-O-D-rhamnosyl-(1,6)-D-glucoside + UDP-D-glucose = cyanidin-3-O-[D-rhamnosyl-(1,6)-D-glucoside]-5-O-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.116","MetaCyc:2.4.1.116-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cyanidin-3-rhamnosylglucoside 5-O-glucosyltransferase activity","secondary_identifiers":["RHEA:12144"],"synonyms":[{"name":"UDP-glucose:cyanidin-3-O-D-rhamnosyl-1,6-D-glucoside 5-O-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:cyanidin-3-O-beta-L-rhamnosyl-(1->6)-beta-D-glucoside 5-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"cyanidin-3-O-rutinoside 5-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-cyanidin 3-rhamnosylglucoside 5-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047214"}


id: PBO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 5A","termid":"PBO:0048381"}


id: PBO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 23","termid":"PBO:0071558"}


id: PBO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Dim1","termid":"PBO:0005309"}


id: PBO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_start_sequence_of","termid":"PBO:0034059"}


id: GO:0035770
data:
  {"annotated_genes":["SJAG_04672","SJAG_00285","SJAG_02419","SJAG_02239","SJAG_02540","SJAG_03277","SJAG_01625","SJAG_01512","SJAG_03876","SJAG_16457","SJAG_03214","SJAG_00507","SJAG_04480","SJAG_04640","SJAG_04427","SJAG_00759","SJAG_02263","SJAG_03424","SJAG_01053","SJAG_01954","SJAG_03113","SJAG_05010","SJAG_02995","SJAG_01159","SJAG_04342","SJAG_02592","SJAG_04350","SJAG_02164","SJAG_03023","SJAG_01910","SJAG_01436","SJAG_00966","SJAG_00544","SJAG_01222","SJAG_02628","SJAG_16454","SJAG_01650","SJAG_03276","SJAG_02638","SJAG_04407","SJAG_02469","SJAG_01479","SJAG_01548","SJAG_04744","SJAG_02213","SJAG_03597","SJAG_00474","SJAG_02663","SJAG_02808","SJAG_05694","SJAG_03762","SJAG_04772","SJAG_01822","SJAG_00423","SJAG_02573","SJAG_03460","SJAG_01897","SJAG_03498","SJAG_03954","SJAG_00391","SJAG_03696","SJAG_03157","SJAG_03132","SJAG_03070","SJAG_04880","SJAG_01317","SJAG_01026","SJAG_00686","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106058,83659,87648,85280,98837,101739,109693,92185,71866,107146,90657,101653,102740,73678,103014,90658,86428,93887,86027,86310,101390,105957,90886,86476,89102,101278,113340,109397,85822,96015,86438,109615,101738,94610,108075,93211,95020,85605,90467,86386,89101,78342,84497,88644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010494"},{"annotations":[86431,87651,84382,85824,91923,96017,102208,91730,88645,109399,91613,108955,89503,105276,105960,107147,111388,110997,107326,91696,108076,109548,88032,88094,106010,113225,111717,99122,101654,88690,97099,112677,104609,111210,108230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000932"}]},"cv_name":"cellular_component","definition":"A non-membranous macromolecular complex containing proteins and translationally silenced mRNAs. RNA granules contain proteins that control the localization, stability, and translation of their RNA cargo. Different types of RNA granules (RGs) exist, depending on the cell type and cellular conditions.","definition_xrefs":["PMID:20368989","PMID:16520386","GOC:go_curators","GOC:sp","PMID:21436445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00391":null,"SJAG_00423":null,"SJAG_00474":null,"SJAG_00507":null,"SJAG_00544":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00966":null,"SJAG_01026":null,"SJAG_01053":null,"SJAG_01159":null,"SJAG_01222":null,"SJAG_01317":null,"SJAG_01436":null,"SJAG_01479":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01625":null,"SJAG_01650":null,"SJAG_01822":null,"SJAG_01897":null,"SJAG_01910":null,"SJAG_01954":null,"SJAG_02164":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02263":null,"SJAG_02419":null,"SJAG_02469":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02808":null,"SJAG_02995":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03214":null,"SJAG_03276":null,"SJAG_03277":null,"SJAG_03283":null,"SJAG_03424":null,"SJAG_03460":null,"SJAG_03498":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03762":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04342":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04640":null,"SJAG_04672":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05694":null,"SJAG_16454":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ribonucleoprotein granule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA granule","type":"narrow"},{"name":"RNP granule","type":"exact"},{"name":"mRNP granule","type":"exact"}],"termid":"GO:0035770","terms_by_termid":{"GO:0000932":null,"GO:0010494":null}}


id: PBO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member S","termid":"PBO:0048922"}


id: GO:0009579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.","definition_xrefs":["GOC:ds","ISBN:0198506732","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thylakoid","secondary_identifiers":["Wikipedia:Thylakoid"],"synonyms":[{"name":"photosynthetic membrane","type":"related"}],"termid":"GO:0009579"}


id: PBO:0046486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC8 antisense RNA 1","termid":"PBO:0046486"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: GO:0061394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061394)","termid":"GO:0061394"}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: PBO:0065281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 1","termid":"PBO:0065281"}


id: PBO:0087448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit k of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; associated only with the dimeric form of ATP synthase","termid":"PBO:0087448"}


id: PBO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8","termid":"PBO:0072014"}


id: GO:2000654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to testosterone stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to testosterone stimulus","termid":"GO:0071394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to testosterone stimulus","termid":"GO:2000654"}


id: PBO:0040024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 12","termid":"PBO:0040024"}


id: GO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric capsule are generated and organized. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule morphogenesis","termid":"GO:0072128"},{"relation_name":"part_of","term_name":"mesonephric capsule development","termid":"GO:0061285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule morphogenesis","termid":"GO:0061286"}


id: PBO:0049458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 3","termid":"PBO:0049458"}


id: GO:1901487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Positive regulation of transcription factor catabolism in response to increased oxygen levels, which results in negative regulation of the SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:vw","PMID:22833559"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process in response to increased oxygen levels (obsolete GO:1901487)","synonyms":[{"name":"negative regulation of SREBP signaling by acceleration of SREBP degradation, in response to increased oxygen levels","type":"narrow"},{"name":"negative regulation of SREBP signaling by positive regulation of transcription factor catabolism in response to increased oxygen levels","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by positive regulation of SREBP degradation, in response to elevated oxygen","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway in presence of oxygen by positive regulation of transcription factor catabolic process","type":"related"},{"name":"negative regulation of SREBP-mediated signaling pathway in response to increased oxygen levels by positive regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901487"}


id: FYPO:0003086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding","termid":"FYPO:0003086"}


id: PBO:0039455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 6","termid":"PBO:0039455"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: MOD:00612
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by derivatization of a residue with 3,3-dithiobis[sulfosuccinimidyl propanoate], DTSSP, or with Pierce EZ-Link Sulfo-NHS-SS-Biotin reagent, sulfosuccinimidyl 3-[(2-[biotinamido]ethyl)disulfanyl]propanoate, followed by reduction with dithiothreitol and then reaction with iodoacetamide.","definition_xrefs":["PubMed:15121203","Unimod:293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"3-(carboxamidomethylthio)propanoylated residue","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:00612"}


id: FYPO:0004719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes and a single, normally located septum, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah","PMID:8387358","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest with condensed chromosomes","termid":"FYPO:0003738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell","synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes, septated cell during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes, septated vegetative cell","type":"exact"}],"termid":"FYPO:0004719"}


id: PBO:0006167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part","termid":"PBO:0006167"}


id: PR:O74389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug176 gene.","definition_xrefs":["UniProtKB:O74389","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 176 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.14","synonyms":[{"name":"Spom972h-mug176","type":"exact"}],"termid":"PR:O74389"}


id: GO:1990899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process following clipping in double-strand break processing of SPO11 induced breaks, where long-tract single-stranded 3'-end DNA is generated from naked (SPO11 has been removed) 5' ends.","definition_xrefs":["PMID:26130711"],"gene_count":0,"genotype_count":0,"name":"obsolete meiotic DNA double-strand break resectioning (obsolete GO:1990899)","termid":"GO:1990899"}


id: GO:0048012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a hepatocyte growth factor receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"HGF receptor signaling pathway","type":"exact"},{"name":"HGF receptor signalling pathway","type":"exact"},{"name":"Met signaling pathway","type":"narrow"}],"termid":"GO:0048012"}


id: RO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in the end of s if p results in a change of state in s whereby s either ceases to exist, or s becomes functionally impaired or s has its fate committed such that it is put on a path to be degraded.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_ending_of","termid":"RO:0002552"}


id: PBO:0087900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulation of cell cycle progression from G1 to S phase, forms a complex with Swi6p that binds to MluI cell cycle box regulatory element in promoters of DNA synthesis genes","termid":"PBO:0087900"}


id: PBO:0006177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_sequence_feature","termid":"PBO:0006177"}


id: GO:1903448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geraniol.","definition_xrefs":["GOC:di","PMID:23200656","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"geraniol biosynthetic process","synonyms":[{"name":"geraniol anabolism","type":"exact"},{"name":"geraniol biosynthesis","type":"exact"},{"name":"geraniol formation","type":"exact"},{"name":"geraniol synthesis","type":"exact"}],"termid":"GO:1903448"}


id: GO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell tolerance induction","termid":"GO:0002665"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell anergy","synonyms":[{"name":"down regulation of T cell anergy","type":"exact"},{"name":"down-regulation of T cell anergy","type":"exact"},{"name":"downregulation of T cell anergy","type":"exact"},{"name":"inhibition of T cell anergy","type":"narrow"},{"name":"negative regulation of T lymphocyte anergy","type":"exact"},{"name":"negative regulation of T-cell anergy","type":"exact"},{"name":"negative regulation of T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002668"}


id: FYPO:0001067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of tyrosine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal tyrosine import","synonyms":[{"name":"abnormal L-tyrosine import","type":"exact"},{"name":"abnormal L-tyrosine import across plasma membrane","type":"exact"},{"name":"abnormal tyrosine import during mitotic cell cycle","type":"related"},{"name":"abnormal tyrosine import during vegetative growth","type":"exact"},{"name":"abnormal tyrosine import into cell","type":"exact"},{"name":"abnormal tyrosine uptake","type":"exact"}],"termid":"FYPO:0001067"}


id: GO:0030556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an rRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rRNA modification guide activity","termid":"GO:0030556"}


id: FYECO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with rich medium containing nitrogen and cells allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 4-7 day recovery in rich medium","termid":"FYECO:0000095"}


id: GO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine uptake","synonyms":[{"name":"regulation of levarterenol uptake","type":"exact"},{"name":"regulation of noradrenaline uptake","type":"exact"},{"name":"regulation of norepinephrine import","type":"exact"}],"termid":"GO:0051621"}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: PBO:0074374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 divergent transcript","termid":"PBO:0074374"}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["PMID:2279698","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: GO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nucleolar RNA (snoRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"sno(s)RNA transcription","termid":"GO:0009302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snoRNA transcription by RNA polymerase II","synonyms":[{"name":"snoRNA transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001015"}


id: GO:0048710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte differentiation.","definition_xrefs":["GOC:vp","PMID:15139015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte differentiation","termid":"GO:0048710"}


id: FYPO:0001121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell shape is altered, but cell size remains normal, in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"abnormal cell shape, normal cell size during vegetative growth","type":"exact"},{"name":"lumpy","type":"related"},{"name":"vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001121"}


id: PBO:0091504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam5","termid":"PBO:0091504"}


id: PATO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001015 relative occurence (obsolete PATO:0001015)","termid":"PATO:0001015"}


id: GO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The macroautophagy process in which specific structures are targeted by the autophagy process.","definition_xrefs":["PMID:20484971","PMID:22966490","PMID:21997368"],"gene_count":0,"genotype_count":0,"name":"obsolete selective autophagy (obsolete GO:0061912)","termid":"GO:0061912"}


id: PR:O60105
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylosuccinate lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04018","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.09c","secondary_identifiers":["UniProtKB:O60105"],"synonyms":[{"name":"ASL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ASase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Adenylosuccinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ADSL","type":"exact"}],"termid":"PR:O60105"}


id: GO:0005915
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"zonula adherens","secondary_identifiers":["NIF_Subcellular:sao1400623473"],"synonyms":[{"name":"adhesion belt","type":"exact"},{"name":"belt desmosome","type":"exact"},{"name":"intermediate junction","type":"exact"},{"name":"zonula adhaerens","type":"exact"}],"termid":"GO:0005915"}


id: PBO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2012","termid":"PBO:0052334"}


id: PBO:0002597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-dependent catabolite inactivation protein, ubiquitin ligase complex subunit (predicted)","termid":"PBO:0002597"}


id: GO:0140022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A giant secretory organelle that comprises a bulb-shape capsule containing a coiled hollow tubule structure attached to it. A cnida defines the phylum Cnidaria.","definition_xrefs":["Wikipedia:Cnida#Structure_and_function"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cnida","synonyms":[{"name":"cnidae (plural)","type":"exact"}],"termid":"GO:0140022"}


id: GO:0097231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a calcium ion stimulus.","definition_xrefs":["GOC:pf","PMID:8937985","PMID:19363786","PMID:21239624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to calcium ion","termid":"GO:0071277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to calcium ion","synonyms":[{"name":"Ca2+ facilitation of cell motility","type":"exact"},{"name":"calcium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097231"}


id: GO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen biosynthetic process","termid":"GO:0042396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine biosynthetic process","synonyms":[{"name":"phosphocreatine anabolism","type":"exact"},{"name":"phosphocreatine biosynthesis","type":"exact"},{"name":"phosphocreatine formation","type":"exact"},{"name":"phosphocreatine synthesis","type":"exact"}],"termid":"GO:0046314"}


id: PBO:0088936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain protein Sqs2","termid":"PBO:0088936"}


id: PBO:0049417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 2G, pseudogene","termid":"PBO:0049417"}


id: GO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructan metabolic process","synonyms":[{"name":"fructan metabolism","type":"exact"},{"name":"levan metabolic process","type":"exact"}],"termid":"GO:0010145"}


id: GO:0009225
data:
  {"annotated_genes":["SJAG_02648","SJAG_02783","SJAG_02178","SJAG_01784","SJAG_01443","SJAG_01089","SJAG_02950","SJAG_03818","SJAG_04728","SJAG_00519","SJAG_02951","SJAG_00890","SJAG_01209","SJAG_03723","SJAG_02954","SJAG_03188","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112153,99179,104465,85329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009298"},{"annotations":[105673,109796,109806,109795,109788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052574"},{"annotations":[114533,104980,110509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006011"},{"annotations":[57576,84673,98782,84333,98882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006048"}]},"cv_name":"biological_process","definition":"The cellular chemical reactions and pathways involving nucleotide-sugars, any nucleotide-carbohydrate in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00519":null,"SJAG_00890":null,"SJAG_00978":null,"SJAG_01089":null,"SJAG_01209":null,"SJAG_01443":null,"SJAG_01784":null,"SJAG_02178":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03188":null,"SJAG_03723":null,"SJAG_03818":null,"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"nucleotide-sugar metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide-sugar metabolism","type":"exact"}],"termid":"GO:0009225","terms_by_termid":{"GO:0006011":null,"GO:0006048":null,"GO:0009298":null,"GO:0052574":null}}


id: GO:0072766
data:
  {"annotated_genes":["SJAG_00727","SJAG_02737","SJAG_01745","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85718,87447,98913,113009],"is_not":false,"summary":null,"term":"GO:0072766"}]},"cv_name":"biological_process","definition":"The process in which chromatin, or kinetochores are anchored to the nuclear envelope. This process involves the microtubule cytoskeleton, and nuclear tethering factors and is responsible for the Rabl-like configuration of chromosomes in the interphase nuclei.","definition_xrefs":["GOC:vw","PMID:23166349","PMID:21965289","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01745":null,"SJAG_02737":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"centromere clustering at the mitotic interphase nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering at the mitotic nuclear envelope","type":"related"},{"name":"centromere clustering at the nuclear periphery","type":"broad"},{"name":"centromere-SPB clustering","type":"broad"},{"name":"kinetochore clustering at SPB","type":"broad"},{"name":"kinetochore clustering at spindle pole body","type":"broad"},{"name":"kinetochore clustering at the old mitotic spindle pole body","type":"exact"},{"name":"kinetochore localization at spindle pole body","type":"broad"},{"name":"rabl configuration","type":"related"}],"termid":"GO:0072766","terms_by_termid":{"GO:0072766":null}}


id: GO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"monoamine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-372542","Reactome:R-HSA-379393","GO:0015201","Reactome:R-HSA-380586","Reactome:R-HSA-380620","Reactome:R-HSA-5660706","Reactome:R-HSA-444160"],"termid":"GO:0008504"}


id: PBO:0057280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 501","termid":"PBO:0057280"}


id: PR:Q10441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.08c","synonyms":[{"name":"Spom972h-SPAC12B10.08c","type":"exact"},{"name":"tRNA(Ile)-2-lysyl-cytidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10441"}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: FYECO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000164 anti-tubulin antibodies added (obsolete FYECO:0000164)","synonyms":[{"name":"anti-tubulin antibody added","type":"exact"}],"termid":"FYECO:0000164"}


id: GO:0010249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving auxin conjugates, a bound form of auxin.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auxin conjugate metabolic process","synonyms":[{"name":"auxin conjugate metabolism","type":"exact"}],"termid":"GO:0010249"}


id: PBO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030800"}


id: GO:1900201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of spread of virus in host, cell to cell (obsolete GO:1900201)","synonyms":[{"name":"regulation of cell to cell spread of virus within host","type":"exact"},{"name":"regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900201"}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: GO:0050589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leucocyanidin + 2-oxoglutarate + O2 = cis- or trans-dihydroquercetin + succinate + CO2 + 2 H2O.","definition_xrefs":["MetaCyc:1.14.11.19-RXN","EC:1.14.20.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leucocyanidin oxygenase activity","secondary_identifiers":["GO:0045432","MetaCyc:RXN-602"],"synonyms":[{"name":"anthocyanidin synthase activity","type":"related"},{"name":"leucoanthocyanidin dioxygenase activity","type":"related"},{"name":"leucoanthocyanidin hydroxylase","type":"related"},{"name":"leucocyanidin,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050589"}


id: PBO:0058101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4316","termid":"PBO:0058101"}


id: GO:0061426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of sulfite transport.","definition_xrefs":["PMID:10870099","GOC:dph","PMID:10234785"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061426)","termid":"GO:0061426"}


id: PBO:0079668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 16","termid":"PBO:0079668"}


id: GO:1900993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (-)-secologanin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00328"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin catabolic process (obsolete GO:1900993)","synonyms":[{"name":"(-)-secologanin breakdown","type":"exact"},{"name":"(-)-secologanin catabolism","type":"exact"},{"name":"(-)-secologanin degradation","type":"exact"}],"termid":"GO:1900993"}


id: GO:0004652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["EC:2.7.7.19"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide adenylyltransferase activity (obsolete GO:0004652)","synonyms":[{"name":"AMP polynucleotidylexotransferase activity","type":"related"},{"name":"ATP-polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotide adenylyltransferase activity","type":"related"},{"name":"ATP:polynucleotidylexotransferase activity","type":"related"},{"name":"NTP polymerase activity","type":"related"},{"name":"RNA adenylating enzyme activity","type":"related"},{"name":"RNA formation factors, PF1","type":"related"},{"name":"adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"related"},{"name":"poly(A) hydrolase activity","type":"related"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"poly(A) synthetase activity","type":"related"},{"name":"poly-A polymerase activity","type":"related"},{"name":"polyadenylate nucleotidyltransferase activity","type":"related"},{"name":"polyadenylate polymerase activity","type":"related"},{"name":"polyadenylate synthetase activity","type":"related"},{"name":"polyadenylic acid polymerase activity","type":"related"},{"name":"polyadenylic polymerase activity","type":"related"},{"name":"terminal riboadenylate transferase activity","type":"related"}],"termid":"GO:0004652"}


id: GO:0004773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-hydroxyandrost-5-en-17-one 3-sulfate + H2O = 3-beta-hydroxyandrost-5-en-17-one + sulfate.","definition_xrefs":["EC:3.1.6.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steryl-sulfatase activity","secondary_identifiers":["MetaCyc:STERYL-SULFATASE-RXN","Reactome:R-HSA-1606839","RHEA:19873"],"synonyms":[{"name":"3-beta-hydroxysteroid sulfate sulfatase activity","type":"related"},{"name":"arylsulfatase C activity","type":"related"},{"name":"dehydroepiandrosterone sulfatase activity","type":"related"},{"name":"dehydroepiandrosterone sulfate sulfatase activity","type":"related"},{"name":"phenolic steroid sulfatase activity","type":"related"},{"name":"pregnenolone sulfatase activity","type":"related"},{"name":"steroid 3-sulfatase activity","type":"related"},{"name":"steroid sulfatase activity","type":"related"},{"name":"steroid sulfate sulfohydrolase activity","type":"related"},{"name":"sterol sulfatase activity","type":"related"},{"name":"steryl-sulfate sulfohydrolase activity","type":"related"},{"name":"steryl-sulphatase activity","type":"exact"}],"termid":"GO:0004773"}


id: CHEBI:43040
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hadacidin","termid":"CHEBI:43040"}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: GO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"negatively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-5 production","secondary_identifiers":["GO:0045406","GO:2000663"],"synonyms":[{"name":"down regulation of interleukin-5 production","type":"exact"},{"name":"down-regulation of interleukin-5 production","type":"exact"},{"name":"downregulation of interleukin-5 production","type":"exact"},{"name":"inhibition of interleukin-5 production","type":"narrow"},{"name":"negative regulation of IL-5 production","type":"exact"},{"name":"negative regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032714"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: PR:Q9Y7Q3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.10","synonyms":[{"name":"Spom972h-SPCC191.10","type":"exact"}],"termid":"PR:Q9Y7Q3"}


id: GO:1900909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"negatively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of olefin metabolic process","synonyms":[{"name":"down regulation of olefin metabolic process","type":"exact"},{"name":"down regulation of olefin metabolism","type":"related"},{"name":"down-regulation of olefin metabolic process","type":"exact"},{"name":"down-regulation of olefin metabolism","type":"related"},{"name":"downregulation of olefin metabolic process","type":"exact"},{"name":"downregulation of olefin metabolism","type":"related"},{"name":"inhibition of olefin metabolic process","type":"narrow"},{"name":"inhibition of olefin metabolism","type":"related"},{"name":"negative regulation of olefin metabolism","type":"related"}],"termid":"GO:1900909"}


id: GO:0070256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"negatively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of mucus secretion","synonyms":[{"name":"negative regulation of mucus production","type":"exact"}],"termid":"GO:0070256"}


id: PBO:0041387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 46","termid":"PBO:0041387"}


id: PBO:0054683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2091","termid":"PBO:0054683"}


id: PBO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_methyltransferase_activity","termid":"PBO:0035712"}


id: PR:O42953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.04 gene.","definition_xrefs":["UniProtKB:O42953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box-containing protein C19G7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.04","synonyms":[{"name":"Spom972h-SPBC19G7.04","type":"exact"}],"termid":"PR:O42953"}


id: GO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of one or more nitrite (NO2-) groups from nitroglycerin or a derivative.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroglycerin reductase activity (obsolete GO:0018547)","secondary_identifiers":["Reactome:R-HSA-9620103"],"synonyms":[{"name":"NG reductase activity","type":"exact"}],"termid":"GO:0018547"}


id: FYPO:0003001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more actin filaments than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"actin filaments present in increased numbers","synonyms":[{"name":"actin filaments present in greater numbers","type":"exact"},{"name":"extra actin filaments","type":"exact"},{"name":"increased level of actin filaments","type":"exact"},{"name":"increased number of actin filaments","type":"exact"}],"termid":"FYPO:0003001"}


id: PBO:0065255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 21","termid":"PBO:0065255"}


id: PR:O74837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.09c","synonyms":[{"name":"Spom972h-pmp31","type":"exact"},{"name":"meiotically up-regulated gene 75 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74837"}


id: BFO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_after","termid":"RO:0002086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preceded_by","termid":"BFO:0000062"}


id: PR:O14369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 4B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein sce3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.04c","secondary_identifiers":["UniProtKB:O14369"],"synonyms":[{"name":"Spom972h-EIF4B","type":"exact"}],"termid":"PR:O14369"}


id: GO:0035338
data:
  {"annotated_genes":["SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103553],"is_not":false,"summary":null,"term":"GO:0035338"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty-acyl-CoA any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006629","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acyl CoA biosynthetic process","type":"exact"},{"name":"long-chain fatty-acyl-CoA anabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA biosynthesis","type":"exact"},{"name":"long-chain fatty-acyl-CoA formation","type":"exact"},{"name":"long-chain fatty-acyl-CoA synthesis","type":"exact"}],"termid":"GO:0035338","terms_by_termid":{"GO:0035338":null}}


id: PBO:0077005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 7","termid":"PBO:0077005"}


id: PBO:0013002
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013002"}


id: GO:0030685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed in the nucleolus during ribosome biogenesis.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005575","GO:0030684","GO:0005634","GO:0005730","GO:0032991"],"is_obsolete":false,"name":"nucleolar preribosome","termid":"GO:0030685"}


id: FYPO:0003737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"delayed protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003737"}


id: PBO:0064177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XD, pseudogene","termid":"PBO:0064177"}


id: GO:0051234
data:
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id: PBO:0085092
data:
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id: PR:Q9UTJ3
data:
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id: GO:0032157
data:
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id: PBO:0018286
data:
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id: PBO:0083671
data:
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id: GO:1900264
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activity","type":"exact"},{"name":"up-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of DNA polymerase I","type":"narrow"},{"name":"up-regulation of DNA polymerase II","type":"narrow"},{"name":"up-regulation of DNA polymerase III","type":"narrow"},{"name":"up-regulation of DNA polymerase V activity","type":"narrow"},{"name":"up-regulation of DNA polymerase alpha","type":"narrow"},{"name":"up-regulation of DNA polymerase beta","type":"narrow"},{"name":"up-regulation of DNA polymerase gamma","type":"narrow"},{"name":"up-regulation of DNA replicase activity","type":"exact"},{"name":"up-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up-regulation of Klenow fragment","type":"narrow"},{"name":"up-regulation of Taq DNA polymerase","type":"narrow"},{"name":"up-regulation of Taq Pol I","type":"narrow"},{"name":"up-regulation of Tca DNA polymerase","type":"narrow"},{"name":"up-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up-regulation of duplicase","type":"broad"},{"name":"up-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of sequenase","type":"related"},{"name":"up-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"upregulation of DNA duplicase activity","type":"exact"},{"name":"upregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of DNA polymerase I","type":"narrow"},{"name":"upregulation of DNA polymerase II","type":"narrow"},{"name":"upregulation of DNA polymerase III","type":"narrow"},{"name":"upregulation of DNA polymerase V activity","type":"narrow"},{"name":"upregulation of DNA polymerase alpha","type":"narrow"},{"name":"upregulation of DNA polymerase beta","type":"narrow"},{"name":"upregulation of DNA polymerase gamma","type":"narrow"},{"name":"upregulation of DNA replicase activity","type":"exact"},{"name":"upregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"upregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"upregulation of Klenow fragment","type":"narrow"},{"name":"upregulation of Taq DNA polymerase","type":"narrow"},{"name":"upregulation of Taq Pol I","type":"narrow"},{"name":"upregulation of Tca DNA polymerase","type":"narrow"},{"name":"upregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"upregulation of beta DNA polymerase activity","type":"narrow"},{"name":"upregulation of delta DNA polymerase activity","type":"narrow"},{"name":"upregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"upregulation of duplicase","type":"broad"},{"name":"upregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"upregulation of eta DNA polymerase activity","type":"narrow"},{"name":"upregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"upregulation of iota DNA polymerase activity","type":"narrow"},{"name":"upregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"upregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"upregulation of mu DNA polymerase activity","type":"narrow"},{"name":"upregulation of nu DNA polymerase activity","type":"narrow"},{"name":"upregulation of sequenase","type":"related"},{"name":"upregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"upregulation of theta DNA polymerase activity","type":"narrow"},{"name":"upregulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900264"}


id: FYPO:0000570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mating projection assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301","FYPO:0000002"],"is_obsolete":false,"name":"decreased shmoo formation","synonyms":[{"name":"decreased conjugation tube formation","type":"exact"},{"name":"decreased mating projection assembly","type":"exact"},{"name":"decreased mating projection formation","type":"exact"},{"name":"decreased shmoo assembly","type":"exact"},{"name":"reduced shmoo formation","type":"exact"},{"name":"shmoo formation: decreased","type":"related"}],"termid":"FYPO:0000570"}


id: PBO:0049050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 45","termid":"PBO:0049050"}


id: PBO:0048217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 1","termid":"PBO:0048217"}


id: PBO:0057586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 891a","termid":"PBO:0057586"}


id: PBO:0040823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridging integrator 2 pseudogene 1","termid":"PBO:0040823"}


id: PBO:0073604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHROOM3 antisense RNA 1","termid":"PBO:0073604"}


id: PBO:0000594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase (predicted)","termid":"PBO:0000594"}


id: PBO:0049705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0049705"}


id: PBO:0109262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory calcium-binding phosphoprotein proline-glutamine rich 1","termid":"PBO:0109262"}


id: PBO:0088568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp7","termid":"PBO:0088568"}


id: PBO:0062361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily U member 2 pseudogene","termid":"PBO:0062361"}


id: GO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nylon, a polymer where the main polymer chain comprises recurring amide groups; these compounds are generally formed from combinations of diamines, diacids and amino acids.","definition_xrefs":["UniProtKB-KW:KW-0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nylon metabolic process","synonyms":[{"name":"nylon metabolism","type":"exact"}],"termid":"GO:0042198"}


id: GO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003396"}


id: PBO:0049884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 3","termid":"PBO:0049884"}


id: PBO:0024470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruption","termid":"PBO:0024470"}


id: GO:0061938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within the somatodendritic compartment.","definition_xrefs":["PMID:18341993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to somatodendritic compartment","synonyms":[{"name":"somatodendritic protein localization","type":"exact"}],"termid":"GO:0061938"}


id: PBO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 13","termid":"PBO:0048092"}


id: PBO:0004752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ste11","termid":"PBO:0004752"}


id: GO:0055023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"is_a","term_name":"positive regulation of heart growth","termid":"GO:0060421"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue growth","synonyms":[{"name":"activation of cardiac muscle growth","type":"narrow"},{"name":"positive regulation of heart muscle growth","type":"exact"},{"name":"stimulation of cardiac muscle growth","type":"narrow"},{"name":"up regulation of cardiac muscle growth","type":"exact"},{"name":"up-regulation of cardiac muscle growth","type":"exact"},{"name":"upregulation of cardiac muscle growth","type":"exact"}],"termid":"GO:0055023"}


id: PBO:0029851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029851"}


id: GO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological response of the kidneys to a decrease in blood flow.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","termid":"GO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","synonyms":[{"name":"renal response to blood flow during renin-angiotensin control of blood pressure","type":"related"}],"termid":"GO:0001999"}


id: GO:0008779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + O-(2-acyl-sn-glycero-3-phospho)ethanolamine = [acyl-carrier protein] + O-(1-beta-acyl-2-acyl-sn-glycero-3-phospho)ethanolamine.","definition_xrefs":["EC:2.3.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity","secondary_identifiers":["MetaCyc:ACYLGPEACYLTRANS-RXN","RHEA:10304"],"synonyms":[{"name":"acyl-ACP-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-phospholipid O-acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:O-(2-acyl-sn-glycero-3-phospho)-ethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0008779"}


id: PBO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 1","termid":"PBO:0061441"}


id: PBO:0084160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084160"}


id: PBO:0077311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 50A","termid":"PBO:0077311"}


id: PBO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshifted","termid":"PBO:0000108"}


id: PBO:0062635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 2 pseudogene","termid":"PBO:0062635"}


id: PBO:0085707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in shmoo formation and bipolar bud site selection; localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p; SPH1 has a paralog, SPA2, that arose from the whole genome duplication","termid":"PBO:0085707"}


id: PBO:0017692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1 (predicted)","termid":"PBO:0017692"}


id: GO:1904000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eating behavior.","definition_xrefs":["PMID:11961051","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"is_a","term_name":"positive regulation of feeding behavior","termid":"GO:2000253"},{"relation_name":"positively_regulates","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eating behavior","synonyms":[{"name":"activation of eating behavior","type":"narrow"},{"name":"activation of eating behaviour","type":"narrow"},{"name":"positive regulation of eating behaviour","type":"exact"},{"name":"up regulation of eating behavior","type":"exact"},{"name":"up regulation of eating behaviour","type":"exact"},{"name":"up-regulation of eating behavior","type":"exact"},{"name":"up-regulation of eating behaviour","type":"exact"},{"name":"upregulation of eating behavior","type":"exact"},{"name":"upregulation of eating behaviour","type":"exact"}],"termid":"GO:1904000"}


id: GO:0051613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of serotonin uptake","termid":"GO:0051611"},{"relation_name":"positively_regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin uptake","synonyms":[{"name":"activation of serotonin uptake","type":"narrow"},{"name":"positive regulation of 5-HT uptake","type":"exact"},{"name":"positive regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"positive regulation of 5HT uptake","type":"exact"},{"name":"positive regulation of serotonin import","type":"exact"},{"name":"stimulation of serotonin uptake","type":"narrow"},{"name":"up regulation of serotonin uptake","type":"exact"},{"name":"up-regulation of serotonin uptake","type":"exact"},{"name":"upregulation of serotonin uptake","type":"exact"}],"termid":"GO:0051613"}


id: PR:O13663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI ethanolamine phosphate transferase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23071:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI ethanolamine phosphate transferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.06","secondary_identifiers":["UniProtKB:O13663"],"synonyms":[{"name":"Spom972h-PIGO","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pi072","type":"related"}],"termid":"PR:O13663"}


id: PBO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase (predicted)","termid":"PBO:0001739"}


id: PBO:0064332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 2","termid":"PBO:0064332"}


id: PBO:0074526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C2","termid":"PBO:0074526"}


id: PBO:0028540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-secondary_cell_septum_absent_from_cell_during_vegetative_growth","termid":"PBO:0028540"}


id: PBO:0067329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 420, pseudogene","termid":"PBO:0067329"}


id: PBO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11 (predicted)","termid":"PBO:0003217"}


id: PBO:0047833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P4","termid":"PBO:0047833"}


id: SO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence GTGRGAA, bound by CSL (CBF1/RBP-JK/Suppressor of Hairless/LAG-1) transcription factors.","definition_xrefs":["PMID:19101542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSL_response_element","synonyms":[{"name":"CSL response element","type":"exact"}],"termid":"SO:0001839"}


id: PBO:0080418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 2","termid":"PBO:0080418"}


id: GO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of an eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation","synonyms":[{"name":"optic placode formation","type":"related"}],"termid":"GO:0001743"}


id: PBO:0064156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IB","termid":"PBO:0064156"}


id: GO:0045275
data:
  {"annotated_genes":["SJAG_00080","SJAG_07006","SJAG_01763","SJAG_03490","SJAG_MIT03","SJAG_01490","SJAG_00601","SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86096,100172,100574,104038,109474,111163,114202,115091],"is_not":false,"summary":null,"term":"GO:0045275"}]},"cv_name":"cellular_component","definition":"A protein complex that transfers electrons from ubiquinol to cytochrome c and translocates two protons across a membrane. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome c1, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["PMID:16228398","PMID:16352458","PMID:17200733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"respiratory chain complex III","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Coenzyme_Q_-_cytochrome_c_reductase","GO:0032842","GO:0045285"],"synonyms":[{"name":"CoQH2-cytochrome c reductase complex","type":"related"},{"name":"coenzyme Q-cytochrome c oxidoreductase complex","type":"related"},{"name":"coenzyme Q-cytochrome c reductase complex","type":"related"},{"name":"complex III","type":"exact"},{"name":"cytochrome bc(1) complex","type":"exact"},{"name":"cytochrome bc1 complex","type":"exact"},{"name":"electron transport complex III","type":"related"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"exact"}],"termid":"GO:0045275","terms_by_termid":{"GO:0045275":null}}


id: FYPO:0006327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the medial cortical nodes is abnormal. Normally, myosin and other node proteins are turned over between the nodes and elsewhere at rates consistent for each protein.","definition_xrefs":["PomBase:mah","PMID:21422229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"abnormal rate of protein exchange in medial cortical node","synonyms":[{"name":"abnormal rate of protein exchange in medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal rate of protein exchange in medial cortical node during vegetative growth","type":"exact"}],"termid":"FYPO:0006327"}


id: PBO:0039330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3","termid":"PBO:0039330"}


id: GO:0071443
data:
  {"annotated_genes":["SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103004],"is_not":false,"summary":null,"term":"GO:0071443"}]},"cv_name":"molecular_function","definition":"Binding to DNA sequences encoding transfer RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"tDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071443","terms_by_termid":{"GO:0071443":null}}


id: PBO:0081396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 235","termid":"PBO:0081396"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: GO:0046129
data:
  {"annotated_genes":["SJAG_01859","SJAG_03096","SJAG_00044","SJAG_00134","SJAG_01070","SJAG_03881","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[112909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[111905,89639,85904,89861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any purine ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside biosynthetic process","termid":"GO:0042451"},{"relation_name":"is_a","term_name":"ribonucleoside biosynthetic process","termid":"GO:0042455"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside anabolism","type":"exact"},{"name":"purine ribonucleoside biosynthesis","type":"exact"},{"name":"purine ribonucleoside formation","type":"exact"},{"name":"purine ribonucleoside synthesis","type":"exact"}],"termid":"GO:0046129","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null}}


id: FYECO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were kept in nitrogen starvation for more than 6 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":">6 hrs in nitrogen starvation","synonyms":[{"name":">6 hours in nitrogen starvation","type":"exact"}],"termid":"FYECO:0000265"}


id: FYPO:0006993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased at the right outer repeat region (otr1R) of the centromere.","definition_xrefs":["PomBase:mah","PMID:26518661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere outer repeat","termid":"FYPO:0003412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere otr1R","synonyms":[{"name":"decreased centromere outer repeat region chromatin silencing at otr1R","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere otr1R during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere otr1R region","type":"exact"},{"name":"decreased chromatin silencing at centromeric otr1R","type":"exact"},{"name":"decreased chromatin silencing at pericentric region otr1R","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region otr1R","type":"related"},{"name":"decreased heterochromatic silencing at centromere otr1R","type":"exact"},{"name":"decreased heterochromatin silencing at centromere otr1R","type":"exact"},{"name":"reduced chromatin silencing at centromere otr1R","type":"exact"}],"termid":"FYPO:0006993"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PBO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 6","termid":"PBO:0072223"}


id: PBO:0055717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 2","termid":"PBO:0055717"}


id: PBO:0058361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4733 host gene","termid":"PBO:0058361"}


id: GO:0010045
data:
  {"annotated_genes":["SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98402],"is_not":false,"summary":null,"term":"GO:0010045"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nickel cation stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nickel cation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to nickel","type":"exact"}],"termid":"GO:0010045","terms_by_termid":{"GO:0010045":null}}


id: GO:0006535
data:
  {"annotated_genes":["SJAG_00582","SJAG_02972","SJAG_04305","SJAG_00283","SJAG_01880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91599,92992,97984,105536,106582],"is_not":false,"summary":null,"term":"GO:0006535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00582":null,"SJAG_01880":null,"SJAG_02972":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"cysteine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:CYSTSYN-PWY"],"synonyms":[{"name":"cysteine anabolism from serine","type":"exact"},{"name":"cysteine formation from serine","type":"exact"},{"name":"cysteine synthesis from serine","type":"exact"}],"termid":"GO:0006535","terms_by_termid":{"GO:0006535":null}}


id: PBO:0085412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sodium-pumping ATPase; the ENA6 gene is found in the PMR2 locus in the CEN.PK113-7D strain of S. cerevisiae, where other common lab strains have a varying number of the ENA genes (ENA1-ENA5) at the same locus","termid":"PBO:0085412"}


id: PBO:0066795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 94","termid":"PBO:0066795"}


id: FYPO:0008136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translational readthough of a stop codon is normal (i.e. indistinguishable from wild-type) during cytoplasmic translation.","definition_xrefs":["PMID:37805140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal stop codon readthrough","termid":"FYPO:0008136"}


id: PBO:0048698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomulin, FKBP associated protein","termid":"PBO:0048698"}


id: PBO:0083167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF PAD1/YDR538W","termid":"PBO:0083167"}


id: PBO:0000589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin responsive transcription factor Prz1","termid":"PBO:0000589"}


id: FYPO:0002900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is abnormal when the cell is exposed to ultraviolet light. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"abnormal mitotic DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"abnormal DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0002900"}


id: PBO:0065446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 3 pseudogene 1","termid":"PBO:0065446"}


id: GO:1990136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9S,10E,12Z)-9-hydroperoxy-10,12-octadecadienoate.","definition_xrefs":["GOC:rph","RHEA:30291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"linoleate 9S-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.58"],"synonyms":[{"name":"9-lipoxygenase activity","type":"related"},{"name":"9S-lipoxygenase activity","type":"related"},{"name":"linoleate 9-lipoxygenase activity","type":"related"},{"name":"linoleate:oxygen 9S-oxidoreductase activity","type":"exact"}],"termid":"GO:1990136"}


id: PBO:0086105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of respiratory complex III; mitochondrial inner membrane protein; required for an early step in assembly of respiratory complex III (cytochrome bc1 complex); mRNA is targeted to mitochondria","termid":"PBO:0086105"}


id: GO:0045847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"negative regulation of response to nutrient levels","termid":"GO:0032108"},{"relation_name":"negatively_regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitrogen utilization","synonyms":[{"name":"down regulation of nitrogen utilization","type":"exact"},{"name":"down-regulation of nitrogen utilization","type":"exact"},{"name":"downregulation of nitrogen utilization","type":"exact"},{"name":"inhibition of nitrogen utilization","type":"narrow"}],"termid":"GO:0045847"}


id: PBO:0076058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stonin 1","termid":"PBO:0076058"}


id: PBO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 2","termid":"PBO:0072752"}


id: PBO:0075820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine rich single-pass membrane protein 1","termid":"PBO:0075820"}


id: FYPO:0006064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring disassembly is abnormal.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal septin ring disassembly during vegetative growth","synonyms":[{"name":"abnormal septin ring disassembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006064"}


id: FYPO:0002801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein degradation during nitrogen starvation","synonyms":[{"name":"normal protein breakdown during nitrogen starvation","type":"exact"},{"name":"normal protein catabolic process during nitrogen starvation","type":"exact"},{"name":"normal protein catabolism during nitrogen starvation","type":"exact"},{"name":"normal protein degradation during nitrogen depletion","type":"exact"},{"name":"normal protein degradation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002801"}


id: GO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chromatophore, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chromatophore ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"}],"termid":"GO:0048494"}


id: GO:0032266
data:
  {"annotated_genes":["SJAG_03250","SJAG_00115","SJAG_01519","SJAG_02587","SJAG_04010","SJAG_04024","SJAG_00971","SJAG_03851","SJAG_04963","SJAG_01135","SJAG_01382","SJAG_00173","SJAG_00638","SJAG_00314","SJAG_04219","SJAG_02248","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86696,87609,92037,93713,94709,95797,95932,95933,96384,97809,100912,104734,105722,105871,106070,108535,111292],"is_not":false,"summary":null,"term":"GO:0032266"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.","definition_xrefs":["PMID:10209156","GOC:bf","PMID:11395417","PMID:11557775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00173":null,"SJAG_00314":null,"SJAG_00638":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01519":null,"SJAG_01783":null,"SJAG_02248":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04219":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-P binding","type":"exact"},{"name":"phosphatidylinositol 3-phosphate binding","type":"exact"}],"termid":"GO:0032266","terms_by_termid":{"GO:0032266":null}}


id: GO:0004736
data:
  {"annotated_genes":["SJAG_00464"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101517],"is_not":false,"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + bicarbonate + pyruvate = ADP + 2 H+ + oxaloacetate + phosphate.","definition_xrefs":["EC:6.4.1.1","RHEA:20844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"pyruvate carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70501","KEGG_REACTION:R00344","MetaCyc:PYRUVATE-CARBOXYLASE-RXN"],"synonyms":[{"name":"pyruvate:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"pyruvic carboxylase activity","type":"related"}],"termid":"GO:0004736","terms_by_termid":{"GO:0004736":null}}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: FYPO:0000713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which the response to starvation for one or more nutrients is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to starvation","synonyms":[{"name":"abnormal cellular response to depletion","type":"exact"},{"name":"abnormal cellular response to deprivation","type":"exact"}],"termid":"FYPO:0000713"}


id: PBO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR98","termid":"PBO:0001497"}


id: PBO:0005163
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRE1-like","termid":"PBO:0005163"}


id: PBO:0026749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_torin1","termid":"PBO:0026749"}


id: PBO:0046912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member E4","termid":"PBO:0046912"}


id: GO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-demethylsterigmatocystin + S-adenosyl-L-methionine = sterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:2.1.1.109-RXN","EC:2.1.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"demethylsterigmatocystin 6-O-methyltransferase activity","secondary_identifiers":["RHEA:11504"],"synonyms":[{"name":"O-methyltransferase I","type":"related"},{"name":"S-adenosyl-L-methionine:6-demethylsterigmatocystin 6-O-methyltransferase activity","type":"related"},{"name":"demethylsterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047145"}


id: GO:0017141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic susceptibility/resistance (obsolete GO:0017141)","synonyms":[{"name":"antibiotic susceptibility/resistance","type":"exact"}],"termid":"GO:0017141"}


id: PBO:0069965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1260, pseudogene","termid":"PBO:0069965"}


id: GO:1903670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:16756958","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sprouting angiogenesis","termid":"GO:1903670"}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: GO:1902724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle satellite cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23212449","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle cell proliferation","termid":"GO:0014858"},{"relation_name":"positively_regulates","term_name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle satellite cell proliferation","synonyms":[{"name":"activation of satellite cell proliferation","type":"narrow"},{"name":"up regulation of satellite cell proliferation","type":"exact"},{"name":"up-regulation of satellite cell proliferation","type":"exact"},{"name":"upregulation of satellite cell proliferation","type":"exact"}],"termid":"GO:1902724"}


id: MOD:01478
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into an 4'-fluoro-L-fluorophenylalanine.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-phenylalanine","termid":"MOD:01227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4'-fluoro-L-phenylalanine","synonyms":[{"name":"4-fluorophenylalanine","type":"exact"},{"name":"p-fluorophenylalanine","type":"exact"},{"name":"para-fluorophenylalanine","type":"exact"},{"name":"rho-fluorophenylalanine","type":"exact"}],"termid":"MOD:01478"}


id: PBO:0062495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 12","termid":"PBO:0062495"}


id: GO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.","definition_xrefs":["GOC:mtg_sensu","GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen development","secondary_identifiers":["GO:0009564","GO:0048231"],"synonyms":[{"name":"formation of generative and vegetative cells","type":"exact"},{"name":"male gametophyte development","type":"exact"},{"name":"male gametophyte formation","type":"exact"},{"name":"microgametophyte development","type":"exact"},{"name":"pollen grain formation","type":"exact"}],"termid":"GO:0009555"}


id: GO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host signal transduction pathway","termid":"GO:0052027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host signal transduction pathway","secondary_identifiers":["GO:0044502","GO:0052526"],"synonyms":[{"name":"activation by symbiont of host signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of host signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"positive regulation of signal transduction in other organism","type":"broad"},{"name":"stimulation by symbiont of host signal transduction pathway","type":"narrow"},{"name":"up regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"up-regulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"upregulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052028"}


id: PBO:0048211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRG3 antisense RNA 1","termid":"PBO:0048211"}


id: PATO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of not being clearly visible.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conspicuousness","termid":"PATO:0001998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inconspicuous","synonyms":[{"name":"faint","type":"related"}],"termid":"PATO:0000464"}


id: PBO:0075965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 6","termid":"PBO:0075965"}


id: PBO:0050751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 13","termid":"PBO:0050751"}


id: PBO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase family member 3, pseudogene","termid":"PBO:0048222"}


id: PBO:0085912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; similar to transcriptional regulators from the zinc cluster (binuclear cluster) family; null mutant is sensitive to caffeine","termid":"PBO:0085912"}


id: FYPO:0006871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased protein phosphorylation during cellular response to IR","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006871"}


id: PBO:0002401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase (predicted)","termid":"PBO:0002401"}


id: GO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mast cell cytokine production","termid":"GO:0032762"}


id: PBO:0090336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex19 protein","termid":"PBO:0090336"}


id: GO:1903729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24514900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of plasma membrane organization","synonyms":[{"name":"regulation of plasma membrane organisation","type":"exact"},{"name":"regulation of plasma membrane organization and biogenesis","type":"related"}],"termid":"GO:1903729"}


id: GO:0102132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxypimeloyl-[acp] methyl ester = NADPH + H+ + a 3-oxo-pimeloyl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity (obsolete GO:0102132)","termid":"GO:0102132"}


id: PBO:0072486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 15","termid":"PBO:0072486"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["EC:1.1.99.3","MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: GO:0046662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition of eggs, either fertilized or not, upon a surface or into a medium.","definition_xrefs":["PMID:11932766","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"egg-laying behavior","termid":"GO:0018991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of egg-laying behavior","secondary_identifiers":["GO:0048042"],"synonyms":[{"name":"regulation of oviposition","type":"exact"},{"name":"regulation of post-mating oviposition","type":"narrow"}],"termid":"GO:0046662"}


id: PBO:0068644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 25, pseudogene","termid":"PBO:0068644"}


id: GO:0071538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by an SH2 domain interaction.","definition_xrefs":["GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete SH2 domain-mediated complex assembly (obsolete GO:0071538)","termid":"GO:0071538"}


id: GO:0086103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An G protein-coupled receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:17376402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"heart process","termid":"GO:0003015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in heart process","type":"exact"},{"name":"GPCR signaling pathway involved in cardiac process","type":"exact"},{"name":"GPCR signaling pathway involved in heart process","type":"exact"}],"termid":"GO:0086103"}


id: PBO:0075333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 2","termid":"PBO:0075333"}


id: FYECO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A sequential growth condition in which cells are first grown at a high temperature followed by growth at low temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temperature shift, high to low","termid":"FYECO:0000294"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: PBO:0077937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTEP2-CSNK1E readthrough","termid":"PBO:0077937"}


id: PATO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased permeability","synonyms":[{"name":"low permeability","type":"exact"}],"termid":"PATO:0001578"}


id: GO:1903265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor-mediated signaling pathway.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","PMID:23453807","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"activation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of adipocytokine signaling pathway","type":"related"},{"name":"activation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of adipocytokine signaling pathway","type":"related"},{"name":"positive regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of adipocytokine signaling pathway","type":"related"},{"name":"up regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"up-regulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of adipocytokine signaling pathway","type":"related"},{"name":"up-regulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"up-regulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"},{"name":"upregulation of TNF-alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of adipocytokine signaling pathway","type":"related"},{"name":"upregulation of tumor necrosis factor alpha-mediated signaling pathway","type":"narrow"},{"name":"upregulation of tumor necrosis factor-mediated signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:1903265"}


id: GO:0034142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 4.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 4 signaling pathway","synonyms":[{"name":"TLR4 signaling pathway","type":"exact"},{"name":"toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034142"}


id: GO:0034136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 2 signaling pathway","termid":"GO:0034135"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"negative regulation of TLR2 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034136"}


id: GO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell differentiation","synonyms":[{"name":"regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045625"}


id: GO:0102999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 2-hydroxylamino-4,6-dinitrotoluene = 2-hydroxylamino-4,6-dinitrotoluene-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:2-hydroxylamino-4,6-dinitrotoluene-O-glucosyltransferase activity (obsolete GO:0102999)","termid":"GO:0102999"}


id: PBO:0086129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086129"}


id: FYPO:0005291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"increased RNA level during cellular response to excess zinc ions","type":"narrow"},{"name":"increased RNA level during cellular response to zinc","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0005291"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: PBO:0068860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 100, pseudogene","termid":"PBO:0068860"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: PBO:0011091
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after cerevisiae","termid":"PBO:0011091"}


id: PBO:0056219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member C2","termid":"PBO:0056219"}


id: GO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the host nuclear envelope; continuous with the endoplasmic reticulum of the host cell and sometimes studded with ribosomes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host organelle outer membrane","termid":"GO:0039661"},{"relation_name":"is_a","term_name":"host cell nuclear membrane","termid":"GO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear outer membrane","termid":"GO:0044202"}


id: PBO:0079822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like autophagy activating kinase 1","termid":"PBO:0079822"}


id: GO:1902918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(5-hydroxyvalerate).","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:mengo_curators","PMID:21705209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) metabolic process","termid":"GO:1902920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(5-hydroxyvalerate) metabolic process","synonyms":[{"name":"poly(5-hydroxyvalerate) metabolism","type":"exact"}],"termid":"GO:1902918"}


id: GO:0051894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-matrix adhesion","termid":"GO:0001954"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"},{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"positively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007155","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of focal adhesion assembly","synonyms":[{"name":"activation of focal adhesion formation","type":"narrow"},{"name":"stimulation of focal adhesion formation","type":"narrow"},{"name":"up regulation of focal adhesion formation","type":"exact"},{"name":"up-regulation of focal adhesion formation","type":"exact"},{"name":"upregulation of focal adhesion formation","type":"exact"}],"termid":"GO:0051894"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: MOD:01221
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-formyl-L-threonine.","definition_xrefs":["Unimod:122#T","PubMed:15799070","PubMed:11861642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-formyl-L-threonine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01221"}


id: PATO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001211 solid_angle_quantity (obsolete PATO:0001211)","termid":"PATO:0001211"}


id: GO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an adrenal chromaffin cell. An adrenal chromaffin cell is a neuroendocrine cell that stores epinephrine secretory vesicles.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal chromaffin cell differentiation","termid":"GO:0061104"}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: MOD:00728
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"galactosylated","synonyms":[{"name":"Gal","type":"exact"}],"termid":"MOD:00728"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: PBO:0012004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20 (predicted)","termid":"PBO:0012004"}


id: PBO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_export","termid":"PBO:0031702"}


id: GO:0072578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor clustering process in which neurotransmitter-gated ion channels are localized to distinct domains in the cell membrane.","definition_xrefs":["PMID:20843816","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter-gated ion channel clustering","termid":"GO:0072578"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: PBO:0065284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 4","termid":"PBO:0065284"}


id: GO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460.","definition_xrefs":["RESID:AA0266","RESID:AA0271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein-heme P460 linkage","synonyms":[{"name":"protein-haem P460 linkage","type":"exact"}],"termid":"GO:0018174"}


id: PBO:0070476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 11","termid":"PBO:0070476"}


id: PBO:0028443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028443"}


id: GO:1900170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid mediated signaling pathway","termid":"GO:1900169"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid mediated signaling pathway","termid":"GO:0043402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glucocorticoid mediated signaling pathway","synonyms":[{"name":"down regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"down regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"down-regulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"down-regulation of glucocorticoid mediated signalling","type":"exact"},{"name":"downregulation of glucocorticoid mediated signaling pathway","type":"exact"},{"name":"downregulation of glucocorticoid mediated signalling","type":"exact"},{"name":"inhibition of glucocorticoid mediated signaling pathway","type":"narrow"},{"name":"inhibition of glucocorticoid mediated signalling","type":"narrow"},{"name":"negative regulation of glucocorticoid mediated signalling","type":"exact"}],"termid":"GO:1900170"}


id: PBO:0046772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exophilin 5","termid":"PBO:0046772"}


id: GO:0050630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoeugenol = S-adenosyl-L-homocysteine + isomethyleugenol.","definition_xrefs":["MetaCyc:2.1.1.146-RXN","EC:2.1.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"(iso)eugenol O-methyltransferase activity","secondary_identifiers":["RHEA:17081"],"synonyms":[{"name":"S-adenosyl-L-methionine:isoeugenol O-methyltransferase activity","type":"related"},{"name":"isoeugenol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050630"}


id: GO:2001030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular glucuronidation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of cellular glucuronidation","termid":"GO:2001029"},{"relation_name":"negatively_regulates","term_name":"cellular glucuronidation","termid":"GO:0052695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellular glucuronidation","synonyms":[{"name":"negative regulation of cellular glucuronide biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronide biosynthetic process","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthesis","type":"exact"},{"name":"negative regulation of cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:2001030"}


id: PBO:0073067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan 4 pseudogene","termid":"PBO:0073067"}


id: PBO:0071072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 74","termid":"PBO:0071072"}


id: PBO:0059711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 19","termid":"PBO:0059711"}


id: GO:1902071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"regulation of HIF1alpha pathway","type":"exact"},{"name":"regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902071"}


id: PBO:0063887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class P","termid":"PBO:0063887"}


id: PBO:0078916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 5-1","termid":"PBO:0078916"}


id: PBO:0054308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1700","termid":"PBO:0054308"}


id: PBO:0051664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INAVA pseudogene 1","termid":"PBO:0051664"}


id: FYPO:0006189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cables is normal (i.e. indistinguishable from wild type). Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to actin cable","synonyms":[{"name":"normal protein localisation to actin cable","type":"exact"},{"name":"normal protein localization to actin cable during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cable during vegetative growth","type":"exact"},{"name":"normal protein localization to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006189"}


id: PBO:0054046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1387","termid":"PBO:0054046"}


id: PBO:0053452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 400","termid":"PBO:0053452"}


id: GO:0043714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + acetyl-CoA + H2O = (R)-citramalate + CoA.","definition_xrefs":["RHEA:19045","GOC:jl","PMID:9864346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"(R)-citramalate synthase activity","secondary_identifiers":["MetaCyc:RXN-7743","EC:2.3.3.21"],"synonyms":[{"name":"citramalate synthase","type":"broad"}],"termid":"GO:0043714"}


id: PBO:0068204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 511","termid":"PBO:0068204"}


id: PBO:0073999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A5 antisense RNA 1","termid":"PBO:0073999"}


id: PBO:0012604
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose Phosphate Isomerase","termid":"PBO:0012604"}


id: GO:0010998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha phosphorylation","synonyms":[{"name":"eIF2 alpha phosphorylation in response to stress","type":"exact"},{"name":"regulation of translational initiation by eIF2 alpha phosphorylation in response to stress","type":"exact"}],"termid":"GO:0010998"}


id: PBO:0087076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; protein abundance increases in response to DNA replication stress; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37B has a paralog, RPL37A, that arose from the whole genome duplication","termid":"PBO:0087076"}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


