# terms

id: GO:0042771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:0008630"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:0042771"}


id: PBO:0076226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT7 like, STAGA complex subunit gamma","termid":"PBO:0076226"}


id: PBO:0078865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC7 antisense RNA 2","termid":"PBO:0078865"}


id: MOD:02059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-valine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-valine residue","synonyms":[{"name":"XlnkVal","type":"exact"}],"termid":"MOD:02059"}


id: GO:0050452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glutathione + NADP+ = CoA-glutathione + NADPH + H+.","definition_xrefs":["RHEA:14617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CoA-glutathione reductase (NADPH) activity","secondary_identifiers":["MetaCyc:COA-GLUTATHIONE-REDUCTASE-NADPH-RXN","EC:1.8.1.10"],"synonyms":[{"name":"CoA-glutathione reductase (NADP) activity","type":"exact"},{"name":"CoA-glutathione reductase activity","type":"broad"},{"name":"NADPH-dependent coenzyme A-SS-glutathione reductase activity","type":"exact"},{"name":"NADPH:CoA-glutathione oxidoreductase activity","type":"exact"},{"name":"coenzyme A disulfide-glutathione reductase activity","type":"broad"},{"name":"coenzyme A glutathione disulfide reductase activity","type":"broad"},{"name":"glutathione:NADP+ oxidoreductase (CoA-acylating)","type":"exact"}],"termid":"GO:0050452"}


id: GO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:33199372","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transmembrane transporter binding","synonyms":[{"name":"ion channel binding","type":"narrow"}],"termid":"GO:0044325"}


id: GO:0046839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phospholipid dephosphorylation","termid":"GO:0046839"}


id: PBO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization","termid":"PBO:0030859"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: PBO:0067954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 256","termid":"PBO:0067954"}


id: FYPO:0004394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis II, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid segregation","termid":"FYPO:0005509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"lagging chromosomes during meiosis II","synonyms":[{"name":"lagging chromosomes during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004394"}


id: GO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the right ventricle grows along a radial axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial growth involved in right ventricle morphogenesis","termid":"GO:0003244"}


id: PBO:0050268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 46","termid":"PBO:0050268"}


id: PR:O74851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase adg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.01c","synonyms":[{"name":"Spom972h-adg3","type":"exact"}],"termid":"PR:O74851"}


id: PBO:0029845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_acetylation","termid":"PBO:0029845"}


id: PBO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 1","termid":"PBO:0042624"}


id: PBO:0087778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes","termid":"PBO:0087778"}


id: PBO:0042917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR antisense RNA 1","termid":"PBO:0042917"}


id: FYPO:0005251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tellurite (TeO3(2-)) ions. Cells stop growing (and may die) at a concentration of tellurite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tellurite","synonyms":[{"name":"hypersensitive to tellurite","type":"exact"},{"name":"sensitive to tellurite during mitotic cell cycle","type":"related"},{"name":"sensitive to tellurite during vegetative growth","type":"exact"},{"name":"sensitive to tellurite ions","type":"exact"}],"termid":"FYPO:0005251"}


id: GO:1900918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of octadecene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"negatively_regulates","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of octadecene metabolic process","synonyms":[{"name":"down regulation of octadecene metabolic process","type":"exact"},{"name":"down regulation of octadecene metabolism","type":"related"},{"name":"down-regulation of octadecene metabolic process","type":"exact"},{"name":"down-regulation of octadecene metabolism","type":"related"},{"name":"downregulation of octadecene metabolic process","type":"exact"},{"name":"downregulation of octadecene metabolism","type":"related"},{"name":"inhibition of octadecene metabolic process","type":"narrow"},{"name":"inhibition of octadecene metabolism","type":"narrow"},{"name":"negative regulation of octadecene metabolism","type":"related"}],"termid":"GO:1900918"}


id: GO:1903186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:19467235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitellogenesis","synonyms":[{"name":"regulation of yolk production","type":"exact"}],"termid":"GO:1903186"}


id: PBO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex SANT/Myb domain subunit Snt1","termid":"PBO:0090676"}


id: PBO:0073851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 1","termid":"PBO:0073851"}


id: PR:Q10152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.07c","synonyms":[{"name":"Spom972h-SPAC1D4.07c","type":"exact"}],"termid":"PR:Q10152"}


id: PBO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 1 chain","termid":"PBO:0043550"}


id: FYPO:0003595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in a shape that consists of two curves in opposite directions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"S-shaped cell","synonyms":[{"name":"S-shaped vegetative cell","type":"exact"},{"name":"Z-shaped cell","type":"exact"},{"name":"kinked cell","type":"exact"},{"name":"kinky cell","type":"exact"},{"name":"sigmoid cell","type":"exact"}],"termid":"FYPO:0003595"}


id: PBO:0113392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant shows improved incorporation efficiency of noncanonical amino acids in place of amber stop codon","termid":"PBO:0113392"}


id: GO:1904180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization","synonyms":[{"name":"down regulation of membrane depolarization","type":"exact"},{"name":"down-regulation of membrane depolarization","type":"exact"},{"name":"downregulation of membrane depolarization","type":"exact"},{"name":"inhibition of membrane depolarization","type":"narrow"}],"termid":"GO:1904180"}


id: GO:2001110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"},{"relation_name":"negatively_regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lens epithelial cell proliferation","termid":"GO:2001110"}


id: PBO:0080697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 3A","termid":"PBO:0080697"}


id: PBO:0084891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084891"}


id: GO:1905141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GOC:TermGenie","PMID:18359901","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of apical ectodermal ridge formation","termid":"GO:1905140"},{"relation_name":"negatively_regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apical ectodermal ridge formation","synonyms":[{"name":"down regulation of AER formation","type":"related"},{"name":"down regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down regulation of apical epidermal ridge formation","type":"exact"},{"name":"down regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"down-regulation of AER formation","type":"related"},{"name":"down-regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down-regulation of apical epidermal ridge formation","type":"exact"},{"name":"down-regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"downregulation of AER formation","type":"related"},{"name":"downregulation of apical ectodermal ridge formation","type":"exact"},{"name":"downregulation of apical epidermal ridge formation","type":"exact"},{"name":"downregulation of crista ectodermalis apicalis formation","type":"related"},{"name":"inhibition of AER formation","type":"related"},{"name":"inhibition of apical ectodermal ridge formation","type":"narrow"},{"name":"inhibition of apical epidermal ridge formation","type":"narrow"},{"name":"inhibition of crista ectodermalis apicalis formation","type":"related"},{"name":"negative regulation of AER formation","type":"related"},{"name":"negative regulation of apical epidermal ridge formation","type":"exact"},{"name":"negative regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905141"}


id: GO:1904269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell cortex of the leading edge of a cell.","definition_xrefs":["GOC:kmv","GO_REF:0000064","PMID:25843030","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cell leading edge cell cortex","synonyms":[{"name":"cell cortex of cell leading edge","type":"exact"},{"name":"cell cortex of front of cell","type":"exact"},{"name":"cell cortex of leading edge of cell","type":"exact"},{"name":"cell periphery of cell leading edge","type":"related"},{"name":"cell periphery of front of cell","type":"related"},{"name":"cell periphery of leading edge of cell","type":"related"},{"name":"peripheral cytoplasm of cell leading edge","type":"related"},{"name":"peripheral cytoplasm of front of cell","type":"related"},{"name":"peripheral cytoplasm of leading edge of cell","type":"related"}],"termid":"GO:1904269"}


id: GO:0060171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a stereocilium.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"stereocilium membrane","termid":"GO:0060171"}


id: PBO:0081052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 10","termid":"PBO:0081052"}


id: PBO:0069931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1224, pseudogene","termid":"PBO:0069931"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: GO:0004601
data:
  {"annotated_genes":["SJAG_04823","SJAG_00141","SJAG_00489","SJAG_01216","SJAG_02630","SJAG_02515","SJAG_05181","SJAG_01292","SJAG_03166","SJAG_04632","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102869,112802,113431],"is_not":false,"summary":null,"term":"GO:0004601"},{"annotations":[114330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[85531,94058,95372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[113432,101382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[101118,104911,113434,91303,69150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"},{"annotations":[104912,113435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a donor + a peroxide = an oxidized donor + 2 H2O.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_04632":null,"SJAG_04823":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peroxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-140359","Reactome:R-HSA-209973","Reactome:R-HSA-2559639","Reactome:R-HSA-8933635","Reactome:R-HSA-6789031","Reactome:R-HSA-3341296","Reactome:R-HSA-2309773","Reactome:R-HSA-350901","GO:0016687","Reactome:R-HSA-6789126","GO:0016686","EC:1.11.1.-","Reactome:R-HSA-209925","Wikipedia:Peroxidase","Reactome:R-HSA-8855490","Reactome:R-HSA-209840","GO:0016693","GO:0016685","Reactome:R-HSA-1222346","Reactome:R-HSA-209815","Reactome:R-HSA-5631885","KEGG_REACTION:R03532"],"synonyms":[{"name":"MPO","type":"related"},{"name":"bacterial catalase-peroxidase activity","type":"narrow"},{"name":"donor:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"eosinophil peroxidase activity","type":"narrow"},{"name":"extensin peroxidase","type":"narrow"},{"name":"guaiacol peroxidase","type":"narrow"},{"name":"heme peroxidase","type":"narrow"},{"name":"horseradish peroxidase (HRP)","type":"narrow"},{"name":"japanese radish peroxidase","type":"narrow"},{"name":"lactoperoxidase activity","type":"narrow"},{"name":"myeloperoxidase activity","type":"narrow"},{"name":"oxyperoxidase activity","type":"related"},{"name":"peroxidase reaction","type":"exact"},{"name":"protoheme peroxidase","type":"narrow"},{"name":"pyrocatechol peroxidase","type":"narrow"},{"name":"scopoletin peroxidase","type":"narrow"},{"name":"secretory plant peroxidase activity","type":"narrow"},{"name":"thiocyanate peroxidase","type":"narrow"},{"name":"verdoperoxidase","type":"narrow"}],"termid":"GO:0004601","terms_by_termid":{"GO:0004096":null,"GO:0004601":null,"GO:0004602":null,"GO:0008379":null,"GO:0051920":null,"GO:0140824":null}}


id: GO:0019955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity.","definition_xrefs":["GOC:ai","GOC:bf","ISBN:0198599471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cytokine binding","secondary_identifiers":["GO:0019965"],"synonyms":[{"name":"IL binding","type":"narrow"},{"name":"interleukin binding","type":"narrow"}],"termid":"GO:0019955"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: PBO:0077591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 2","termid":"PBO:0077591"}


id: GO:0018949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-xylene, (1,3-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-xylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:mxy"],"synonyms":[{"name":"m-xylene metabolism","type":"exact"},{"name":"meta-xylene metabolic process","type":"exact"},{"name":"meta-xylene metabolism","type":"exact"}],"termid":"GO:0018949"}


id: PBO:0089473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1","termid":"PBO:0089473"}


id: PBO:0052356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 5C","termid":"PBO:0052356"}


id: PBO:0070755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 11","termid":"PBO:0070755"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04352","PRO:DNx","PANTHER:PTHR12415:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: PBO:0057956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3679","termid":"PBO:0057956"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: PBO:0083797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for maturation of Gas1p and Pho8p; involved in protein trafficking; GFP-fusion protein localizes to the ER and YFP-fusion protein to the nuclear envelope-ER network; null mutants have a cell separation defect","termid":"PBO:0083797"}


id: GO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to proteins with similar structure/function to receptor protein tyrosine phosphatases.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RPTP-like protein binding (obsolete GO:0042153)","synonyms":[{"name":"RPTP-like protein binding","type":"exact"},{"name":"receptor protein tyrosine phosphatase-like protein binding","type":"exact"}],"termid":"GO:0042153"}


id: GO:0015113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite (NO2-) ions from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nitrite transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015113"}


id: PBO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/zinc ion transporter (predicted)","termid":"PBO:0003139"}


id: PBO:0074189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 10","termid":"PBO:0074189"}


id: FYPO:0003437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished protein kinase activity during mitotic G1 phase","synonyms":[{"name":"protein kinase activity abolished during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003437"}


id: GO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citramalyl-CoA = itaconyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.56","MetaCyc:ITACONYL-COA-HYDRATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"itaconyl-CoA hydratase activity","secondary_identifiers":["RHEA:13785"],"synonyms":[{"name":"citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)","type":"related"},{"name":"citramalyl-CoA hydro-lyase activity","type":"related"},{"name":"itaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050011"}


id: PBO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Ste11","termid":"PBO:0002559"}


id: PR:Q10235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-folding cofactor B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein alp11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.05","secondary_identifiers":["UniProtKB:Q10235"],"synonyms":[{"name":"Spom972h-TBCB","type":"exact"},{"name":"altered polarity protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10235"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: GO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the transcription of genes into mRNA in its host by directly inhibiting host RNA polymerase II activity. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:36144426","GOC:sp","PMID:25233083","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host transcription","termid":"GO:0039653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA transcription via inhibition of RNA polymerase II activity","synonyms":[{"name":"inhibition of host RNA polymerase II activity by virus","type":"narrow"},{"name":"inhibition of host RNA polymerase II by virus","type":"exact"},{"name":"negative regulation by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host RNA polymerase II activity","type":"narrow"},{"name":"suppression by virus of host mRNA transcription via inhibition of RNA polymerase II activity","type":"narrow"}],"termid":"GO:0039523"}


id: GO:2000842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dehydroepiandrosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"regulation of dehydroepiandrosterone secretion","termid":"GO:2000840"},{"relation_name":"positively_regulates","term_name":"dehydroepiandrosterone secretion","termid":"GO:0035942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of dehydroepiandrosterone secretion","synonyms":[{"name":"positive regulation of 3beta-hydroxyandrost-5-en-17-one secretion","type":"exact"},{"name":"positive regulation of DHEA secretion","type":"exact"},{"name":"positive regulation of dehydroisoandrosterone secretion","type":"exact"}],"termid":"GO:2000842"}


id: GO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"}],"termid":"GO:0002879"}


id: FYPO:0006774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20123972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to prospore septin ring","synonyms":[{"name":"normal protein localisation to prospore septin ring","type":"exact"},{"name":"normal protein localization to forespore septin ring","type":"exact"},{"name":"normal protein localization to septin ring during prospore membrane assembly","type":"exact"}],"termid":"FYPO:0006774"}


id: GO:0045192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of low-density lipoproteins, also known as beta lipoproteins, one of the classes of lipoproteins found in the bloodstream of animals, acting as a carrier for cholesterol and fats.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein catabolic process (obsolete GO:0045192)","synonyms":[{"name":"LDL catabolic process","type":"exact"},{"name":"LDL catabolism","type":"exact"},{"name":"low-density lipoprotein breakdown","type":"exact"},{"name":"low-density lipoprotein catabolic process","type":"exact"},{"name":"low-density lipoprotein catabolism","type":"exact"},{"name":"low-density lipoprotein degradation","type":"exact"}],"termid":"GO:0045192"}


id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95351],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_05926","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99249,110422],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:12665594","GOC:dph","PMID:16314458","PMID:22388736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: PBO:0086610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086610"}


id: PBO:0049008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gephyrin","termid":"PBO:0049008"}


id: PBO:0066980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 283","termid":"PBO:0066980"}


id: GO:0042391
data:
  {"annotated_genes":["SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85639,92842],"is_not":false,"summary":null,"term":"GO:0042391"}]},"cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:jl","ISBN:0198506732","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042391","terms_by_termid":{"GO:0042391":null}}


id: GO:0062227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of adult somatic muscle development","termid":"GO:0062226"},{"relation_name":"positively_regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult somatic muscle development","termid":"GO:0062227"}


id: GO:0060544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of necroptotic process","synonyms":[{"name":"regulation of necroptosis","type":"narrow"}],"termid":"GO:0060544"}


id: PBO:0042352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD86 molecule","termid":"PBO:0042352"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: PBO:0049217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 1","termid":"PBO:0049217"}


id: PBO:0040682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pre-mRNA processing factor","termid":"PBO:0040682"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: PBO:0058677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6805","termid":"PBO:0058677"}


id: PBO:0052685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 9","termid":"PBO:0052685"}


id: PATO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process inhering in a bearer by virtue of the bearer's having slow progressive course of indefinite duration.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic","termid":"PATO:0001863"}


id: GO:0021884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"forebrain neuron differentiation","termid":"GO:0021879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuron development","termid":"GO:0021884"}


id: PBO:0072848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 3","termid":"PBO:0072848"}


id: PBO:0075219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPN upstream open reading frame","termid":"PBO:0075219"}


id: PBO:0066014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 1","termid":"PBO:0066014"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: GO:0048687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of sprouting of an injured axon.","definition_xrefs":["GOC:dph","GOC:lm","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of sprouting of injured axon","termid":"GO:0048686"},{"relation_name":"positively_regulates","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting of injured axon","synonyms":[{"name":"activation of sprouting of injured axon","type":"narrow"},{"name":"stimulation of sprouting of injured axon","type":"narrow"},{"name":"up regulation of sprouting of injured axon","type":"exact"},{"name":"up-regulation of sprouting of injured axon","type":"exact"},{"name":"upregulation of sprouting of injured axon","type":"exact"}],"termid":"GO:0048687"}


id: GO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, non-sculptured part of the exine which lies below the sexine.","definition_xrefs":["PMID:5722147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"exine","termid":"GO:0043668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nexine","termid":"GO:0043672"}


id: PBO:0089899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase","termid":"PBO:0089899"}


id: PBO:0040397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit F","termid":"PBO:0040397"}


id: PBO:0076923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor CP2 like 1","termid":"PBO:0076923"}


id: GO:0038106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choriogonadotropin hormone, a heterodimer, with an alpha subunit identical to that of luteinizing hormone (LH), follicle-stimulating hormone (FSH) and thyroid-stimulating hormone (TSH), and a unique beta subunit.","definition_xrefs":["GOC:rl","Wikipedia:Human_chorionic_gonadotropin","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choriogonadotropin hormone binding","synonyms":[{"name":"chorionic gonadotrophin binding","type":"exact"},{"name":"chorionic gonadotropin binding","type":"exact"}],"termid":"GO:0038106"}


id: FYPO:0007560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-arginine. Cells stop growing (and may die) at a concentration of L-arginine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:32896087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to arginine","synonyms":[{"name":"decreased cell population growth in presence of arginine","type":"exact"},{"name":"hypersensitive to arginine","type":"exact"},{"name":"sensitive to L-arginine","type":"exact"},{"name":"sensitive to arginine during mitotic cell cycle","type":"related"},{"name":"sensitive to arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0007560"}


id: GO:0046537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2-phosphoglycerate = (2R)-3-phosphoglycerate; this reaction does not require the cofactor 2,3-bisphosphoglycerate.","definition_xrefs":["EC:5.4.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglycerate mutase activity","termid":"GO:0004619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity","secondary_identifiers":["MetaCyc:3PGAREARR-RXN"],"termid":"GO:0046537"}


id: PBO:0063778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 5","termid":"PBO:0063778"}


id: PBO:0049187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grainyhead like transcription factor 3","termid":"PBO:0049187"}


id: PBO:0049343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 1","termid":"PBO:0049343"}


id: GO:0031400
data:
  {"annotated_genes":["SJAG_01985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033234"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein modification process","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"down regulation of protein modification","type":"exact"},{"name":"down-regulation of protein modification","type":"exact"},{"name":"downregulation of protein modification","type":"exact"},{"name":"inhibition of protein modification","type":"narrow"}],"termid":"GO:0031400","terms_by_termid":{"GO:0033234":null}}


id: GO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The narrow gap that separates the presynaptic and postsynaptic membranes, into which neurotransmitter is released.","definition_xrefs":["GOC:jl","PMID:30784960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"synaptic cleft","secondary_identifiers":["NIF_Subcellular:sao243541954"],"termid":"GO:0043083"}


id: GO:0008817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + 2 corrinoid + reduced [electron-transfer flavoprotein] = 2 adenosylcorrinoid + 3 H+ + oxidized [electron-transfer flavoprotein] + 2 triphosphate. The corrinoid can be cob(II)yrinate a,c diamide, cob(II)inamide or cob(II)alamin.","definition_xrefs":["PMID:19933577","PMID:5946606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"corrinoid adenosyltransferase activity","secondary_identifiers":["GO:0043784","MetaCyc:R343-RXN","MetaCyc:COBALADENOSYLTRANS-RXN","Reactome:R-HSA-3322125","KEGG_REACTION:R05218","EC:2.5.1.17"],"synonyms":[{"name":"ATP:cob(I)alamin Co-beta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:cob(I)alamin cobeta-adenosyltransferase activity","type":"related"},{"name":"ATP:cob(I)yrinic acid-a,c-diamide cobeta-adenosyltransferase activity","type":"narrow"},{"name":"ATP:corrinoid adenosyltransferase activity","type":"related"},{"name":"aquacob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"aquocob(I)alamin vitamin B12s adenosyltransferase activity","type":"narrow"},{"name":"cob(I)alamin adenosyltransferase activity","type":"narrow"},{"name":"cob(I)yrinic acid a,c-diamide adenosyltransferase activity","type":"narrow"},{"name":"cob(II)yrinic acid a,c-diamide reductase activity","type":"narrow"},{"name":"cob(II)yrinic acid-a,c-diamide:FMN oxidoreductase activity","type":"narrow"},{"name":"vitamin B12s adenosyltransferase activity","type":"related"}],"termid":"GO:0008817"}


id: PBO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1","termid":"PBO:0003180"}


id: PBO:0076007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIMATE-MUSTN1 readthrough","termid":"PBO:0076007"}


id: GO:0098998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic early endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic endosome membrane","termid":"GO:0098999"},{"relation_name":"part_of","term_name":"postsynaptic early endosome membrane","termid":"GO:0098896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"extrinsic component of postsynaptic early endosome membrane","termid":"GO:0098998"}


id: GO:1990929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolysis of terminal non-reducing alpha-sulfoquinovoside residues in alpha-sulfoquinovosyl diacylglycerides and alpha-sulfoquinovosyl glycerol, generating alpha-sulfoquinovose.","definition_xrefs":["GOC:imk","PMID:26878550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"sulfoquinovosidase activity","termid":"GO:1990929"}


id: PBO:0028136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dense_body_present_in_nucleolus","termid":"PBO:0028136"}


id: PR:Q9URX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-cysteine desulfhydrase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.03","secondary_identifiers":["UniProtKB:Q9URX3"],"synonyms":[{"name":"ACC deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ACCD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dcyD","type":"exact"}],"termid":"PR:Q9URX3"}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: GO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the macropinosome involved in the uptake of a virus into a host cell. Occurs after internalization of the virus in a macropinosome, and results in the release of viral contents from the macropinosome into the host cell cytoplasm.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macropinosome lysis involved in viral entry into host cell","termid":"GO:0075511"}


id: PBO:0042762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 55","termid":"PBO:0042762"}


id: PBO:0005408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly protein (predicted)","termid":"PBO:0005408"}


id: PBO:0039619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R overlapping transcript 1","termid":"PBO:0039619"}


id: PBO:0087403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of 3 complexes; subunit of the Nup84p nuclear pore subcomplex that contributes to nucleocytoplasmic transport and NPC biogenesis; subunit of the COPII vesicle coat required for ER-to-Golgi transport; subunit of SEACAT, a subcomplex of the coatomer-related, vacuolar-associated SEA complex, that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p, thereby resulting in activation of TORC1 signaling; human SEC13 homolog","termid":"PBO:0087403"}


id: PBO:0067366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 466, pseudogene","termid":"PBO:0067366"}


id: GO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an aorta are generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["GOC:dgh","UBERON:0000947","MA:0000062","GOC:bf","Wikipedia:Aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta morphogenesis","termid":"GO:0035909"}


id: GO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin metabolic process","termid":"GO:0006693"},{"relation_name":"is_a","term_name":"prostanoid biosynthetic process","termid":"GO:0046457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostaglandin biosynthetic process","synonyms":[{"name":"prostaglandin anabolism","type":"exact"},{"name":"prostaglandin biosynthesis","type":"exact"},{"name":"prostaglandin formation","type":"exact"},{"name":"prostaglandin synthesis","type":"exact"}],"termid":"GO:0001516"}


id: PBO:0082602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin light chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; regulates endocytic progression; thought to regulate clathrin function; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion","termid":"PBO:0082602"}


id: PBO:0029569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell_population_(obsolete_FYPO:0002152)","termid":"PBO:0029569"}


id: PBO:0058422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4791","termid":"PBO:0058422"}


id: PR:Q96WV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureG-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.05c","synonyms":[{"name":"Spom972h-ure7","type":"exact"}],"termid":"PR:Q96WV0"}


id: GO:0007561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The eversion (turning inside out) of imaginal discs from their peripodial sacs, resulting in movement of the epithelium to the outside of the larval epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc eversion","termid":"GO:0007561"}


id: GO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way. Once recruited to an RNA polymerase III hybrid type promoter, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH-2018","PMID:12381659"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III hybrid type promoter TFIIIB-type transcription factor activity (obsolete GO:0001040)","termid":"GO:0001040"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: GO:0061716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a processed miRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:rph","PMID:15738428","GOC:BHF_miRNA","PMID:21554756","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"miRNA transport","termid":"GO:1990428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"miRNA export from nucleus","termid":"GO:0061716"}


id: GO:0033593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of BRCA2 and MAGE-D1; may mediate the synergistic activities of the two proteins in regulating cell growth.","definition_xrefs":["PMID:15930293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BRCA2-MAGE-D1 complex","termid":"GO:0033593"}


id: PBO:0067367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 468, pseudogene","termid":"PBO:0067367"}


id: GO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus of the pronephric kidney over time from its initial formation until its mature state. The pronephric glomerulus is part of the pronephric nephron and is restricted to one body segment.","definition_xrefs":["GOC:dgh","GOC:mtg_kidney_jan10","ZFA:00001557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric glomerulus development","termid":"GO:0039021"}


id: PBO:0090409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase Tpt1/ CIA machinery involved in ribosome biogenesis protein Yae1 fusion protein","termid":"PBO:0090409"}


id: PBO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A8","termid":"PBO:0072747"}


id: _global:member_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"_global:member_of"}


id: PBO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase non-catalytic C-lobe domain containing 1","termid":"PBO:0052579"}


id: PBO:0059019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 8","termid":"PBO:0059019"}


id: GO:1901470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of syringal lignin catabolic process","termid":"GO:1901469"},{"relation_name":"negatively_regulates","term_name":"syringal lignin catabolic process","termid":"GO:1901065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syringal lignin catabolic process","synonyms":[{"name":"down regulation of S-lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin breakdown","type":"exact"},{"name":"down regulation of syringal lignin catabolic process","type":"exact"},{"name":"down regulation of syringal lignin catabolism","type":"exact"},{"name":"down regulation of syringal lignin degradation","type":"exact"},{"name":"down-regulation of S-lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin breakdown","type":"exact"},{"name":"down-regulation of syringal lignin catabolic process","type":"exact"},{"name":"down-regulation of syringal lignin catabolism","type":"exact"},{"name":"down-regulation of syringal lignin degradation","type":"exact"},{"name":"downregulation of S-lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin breakdown","type":"exact"},{"name":"downregulation of syringal lignin catabolic process","type":"exact"},{"name":"downregulation of syringal lignin catabolism","type":"exact"},{"name":"downregulation of syringal lignin degradation","type":"exact"},{"name":"inhibition of S-lignin catabolic process","type":"exact"},{"name":"inhibition of syringal lignin breakdown","type":"exact"},{"name":"inhibition of syringal lignin catabolic process","type":"narrow"},{"name":"inhibition of syringal lignin catabolism","type":"exact"},{"name":"inhibition of syringal lignin degradation","type":"exact"},{"name":"negative regulation of S-lignin catabolic process","type":"exact"},{"name":"negative regulation of syringal lignin breakdown","type":"exact"},{"name":"negative regulation of syringal lignin catabolism","type":"exact"},{"name":"negative regulation of syringal lignin degradation","type":"exact"}],"termid":"GO:1901470"}


id: GO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of receptor activity in of the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of receptor activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044511"}


id: PBO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2A1 antisense RNA 1","termid":"PBO:0061949"}


id: PBO:0005683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ssp1","termid":"PBO:0005683"}


id: PBO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRG pseudogene 2","termid":"PBO:0050564"}


id: GO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexane-1,3-dione + H2O = 5-oxohexanoate + H+.","definition_xrefs":["EC:3.7.1.10","RHEA:16473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexane-1,3-dione hydrolase activity","secondary_identifiers":["KEGG_REACTION:R03211","MetaCyc:CYCLOHEXANE-13-DIONE-HYDROLASE-RXN"],"synonyms":[{"name":"1,3-cyclohexanedione hydrolase activity","type":"related"},{"name":"cyclohexane-1,3-dione acylhydrolase (decyclizing)","type":"related"}],"termid":"GO:0047796"}


id: MOD:01066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-phenylalanine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated phenylalanine","synonyms":[{"name":"HalPhe","type":"exact"}],"termid":"MOD:01066"}


id: PR:O94704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iec3 gene.","definition_xrefs":["UniProtKB:O94704","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.04","synonyms":[{"name":"Spom972h-iec3","type":"exact"}],"termid":"PR:O94704"}


id: GO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044470"}


id: PBO:0040352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 1","termid":"PBO:0040352"}


id: GO:1903996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:TermGenie","PMID:10518561","GO_REF:0000059","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"regulation of non-membrane spanning protein tyrosine kinase activity","termid":"GO:1903995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of non-membrane spanning protein tyrosine kinase activity","synonyms":[{"name":"down regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down regulation of janus kinase 1 activity","type":"narrow"},{"name":"down regulation of janus kinase 2 activity","type":"narrow"},{"name":"down regulation of janus kinase 3 activity","type":"narrow"},{"name":"down regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"down-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"down-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"down-regulation of janus kinase 1 activity","type":"narrow"},{"name":"down-regulation of janus kinase 2 activity","type":"narrow"},{"name":"down-regulation of janus kinase 3 activity","type":"narrow"},{"name":"down-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"down-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"down-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"downregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"downregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"downregulation of focal adhesion kinase activity","type":"narrow"},{"name":"downregulation of janus kinase 1 activity","type":"narrow"},{"name":"downregulation of janus kinase 2 activity","type":"narrow"},{"name":"downregulation of janus kinase 3 activity","type":"narrow"},{"name":"downregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"downregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"downregulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"inhibition of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"inhibition of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of focal adhesion kinase activity","type":"narrow"},{"name":"inhibition of janus kinase 1 activity","type":"narrow"},{"name":"inhibition of janus kinase 2 activity","type":"narrow"},{"name":"inhibition of janus kinase 3 activity","type":"narrow"},{"name":"inhibition of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"inhibition of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"inhibition of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"negative regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation of focal adhesion kinase activity","type":"narrow"},{"name":"negative regulation of janus kinase 1 activity","type":"narrow"},{"name":"negative regulation of janus kinase 2 activity","type":"narrow"},{"name":"negative regulation of janus kinase 3 activity","type":"narrow"},{"name":"negative regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"negative regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903996"}


id: FYPO:0002947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall","termid":"FYPO:0002946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall morphology","synonyms":[{"name":"cell wall morphology: abnormal","type":"related"}],"termid":"FYPO:0002947"}


id: PBO:0045662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY30 domain containing 2","termid":"PBO:0045662"}


id: PBO:0091856
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the Scp1 C-terminal domain forms a dimer of dimers","termid":"PBO:0091856"}


id: GO:0042398
data:
  {"annotated_genes":["SJAG_03494","SJAG_03632","SJAG_04481","SJAG_00988","SJAG_02408","SJAG_02225","SJAG_00815","SJAG_04156","SJAG_01126","SJAG_05200","SJAG_03679","SJAG_01233","SJAG_00529","SJAG_01616","SJAG_01198","SJAG_03856","SJAG_01351","SJAG_03275","SJAG_00043","SJAG_02599","SJAG_00832","SJAG_00106","SJAG_03224"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108489,104424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[61247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[107611,99725,107612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[100868,104425,109752,108490,102155,101016,86421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[100673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[89404,104510,114218,93119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[99726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[109446,85025,94836,94832,98847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[110746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[99727,107613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"},{"annotations":[102156,101017,109753,110131,86423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[89034,100833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_00832":null,"SJAG_00988":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01233":null,"SJAG_01351":null,"SJAG_01616":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_02599":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03494":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03856":null,"SJAG_04156":null,"SJAG_04481":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular modified amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative anabolism","type":"exact"},{"name":"cellular amino acid derivative biosynthesis","type":"exact"},{"name":"cellular amino acid derivative biosynthetic process","type":"exact"},{"name":"cellular amino acid derivative formation","type":"exact"},{"name":"cellular amino acid derivative synthesis","type":"exact"},{"name":"cellular modified amino acid anabolism","type":"exact"},{"name":"cellular modified amino acid biosynthesis","type":"exact"},{"name":"cellular modified amino acid formation","type":"exact"},{"name":"cellular modified amino acid synthesis","type":"exact"}],"termid":"GO:0042398","terms_by_termid":{"GO:0006659":null,"GO:0006750":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0015940":null,"GO:0046654":null,"GO:0046656":null,"GO:0046901":null,"GO:0052699":null,"GO:0052707":null,"GO:0140479":null,"GO:1903257":null}}


id: PR:Q8TFF9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fah1 gene.","definition_xrefs":["UniProtKB:Q8TFF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase PB8B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.03","synonyms":[{"name":"Spom972h-fah1","type":"exact"}],"termid":"PR:Q8TFF9"}


id: PBO:0085226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p; associates with actin patches on cell cortex; promotes protein-protein interactions essential for endocytosis; binds to and activates Arp2/3 complex in vitro; phosphorylation of Thr-1225 is regulated by MAPK Hog1p in response to osmotic stress; previously thought to be a subunit of poly(A) ribonuclease","termid":"PBO:0085226"}


id: GO:1905380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA transcription mediated by RNA polymerase II.","definition_xrefs":["PMID:10022900","GOC:bhm","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"regulates","term_name":"snRNA transcription by RNA polymerase II","termid":"GO:0042795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0006351","GO:0016073","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"regulation of snRNA transcription by RNA polymerase II","synonyms":[{"name":"regulation of snRNA transcription from Pol II promoter","type":"exact"},{"name":"regulation of snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1905380"}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: PBO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.14","termid":"PBO:0000695"}


id: PBO:0056908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migration and invasion inhibitory protein","termid":"PBO:0056908"}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0003089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic inhibitor kinase Mik1","termid":"PBO:0003089"}


id: PBO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitophagy","termid":"PBO:0031710"}


id: GO:0030552
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96538],"is_not":false,"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cAMP binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP binding","type":"exact"},{"name":"3',5'-cAMP binding","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate binding","type":"exact"},{"name":"cyclic AMP binding","type":"exact"}],"termid":"GO:0030552","terms_by_termid":{"GO:0030552":null}}


id: SO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation that expands or contracts a tandem repeat with regard to a reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_variation","synonyms":[{"name":"short tandem repeat variation","type":"exact"},{"name":"str variation","type":"exact"}],"termid":"SO:0002096"}


id: GO:0031506
data:
  {"annotated_genes":["SJAG_04770","SJAG_01276","SJAG_04906","SJAG_00816","SJAG_01264","SJAG_04316","SJAG_01021","SJAG_01491","SJAG_00598","SJAG_02519","SJAG_03082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101139,105097,100594,89127,114418,96860,100178,101024,93991,102032,83643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall glycoprotein anabolism","type":"exact"},{"name":"cell wall glycoprotein biosynthesis","type":"exact"},{"name":"cell wall glycoprotein formation","type":"exact"},{"name":"cell wall glycoprotein synthesis","type":"exact"}],"termid":"GO:0031506","terms_by_termid":{"GO:0000032":null}}


id: PBO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell","termid":"PBO:0030209"}


id: PBO:0068148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 455","termid":"PBO:0068148"}


id: PBO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E like","termid":"PBO:0051582"}


id: PBO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19B","termid":"PBO:0044741"}


id: PBO:0083178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the characterized snoRNA gene snR73","termid":"PBO:0083178"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: GO:0048481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovule over time, from its formation to the mature structure. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule development","termid":"GO:0048481"}


id: GO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of zinc ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to zinc ion starvation","termid":"GO:0120127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion starvation","synonyms":[{"name":"cellular response to zinc ion limitation","type":"exact"},{"name":"cellular response to zinc starvation","type":"exact"}],"termid":"GO:0034224"}


id: GO:0009788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of abscisic acid (ABA) signaling.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid-activated signaling pathway","termid":"GO:0009787"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to alcohol","termid":"GO:1905958"},{"relation_name":"negatively_regulates","term_name":"abscisic acid-activated signaling pathway","termid":"GO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of abscisic acid-activated signaling pathway","synonyms":[{"name":"down regulation of abscisic acid mediated signaling","type":"exact"},{"name":"down-regulation of abscisic acid mediated signaling","type":"exact"},{"name":"downregulation of abscisic acid mediated signaling","type":"exact"},{"name":"inhibition of abscisic acid mediated signaling","type":"narrow"},{"name":"negative regulation of abscisic acid mediated signaling pathway","type":"related"},{"name":"negative regulation of abscisic acid mediated signalling","type":"exact"}],"termid":"GO:0009788"}


id: PR:Q09749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adiponectin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03283","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOR-like receptor SPBC12C2.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.09c","secondary_identifiers":["UniProtKB:Q09749"],"synonyms":[{"name":"Spom972h-ADIPOR2","type":"exact"}],"termid":"PR:Q09749"}


id: PBO:0057510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 628","termid":"PBO:0057510"}


id: PBO:0030171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030171"}


id: PR:Q9P779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin C1711.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.11","synonyms":[{"name":"Spom972h-SPBC1711.11","type":"exact"}],"termid":"PR:Q9P779"}


id: PBO:0059369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 2","termid":"PBO:0059369"}


id: PBO:0064261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A8 pseudogene 1","termid":"PBO:0064261"}


id: PBO:0001142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase Ggt1","termid":"PBO:0001142"}


id: PBO:0066507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X4","termid":"PBO:0066507"}


id: GO:0030963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-lysine to peptidyl-4,5-dihydroxy-L-lysine.","definition_xrefs":["RESID:AA0370","PMID:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dihydroxylation to 4,5-dihydroxy-L-lysine","termid":"GO:0030963"}


id: PR:P40384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein SPO11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00725","PANTHER:PTHR10848:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.11","secondary_identifiers":["UniProtKB:P40384"],"synonyms":[{"name":"Spom972h-SPO11","type":"exact"}],"termid":"PR:P40384"}


id: PATO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending to the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends to","termid":"PATO:0002463"}


id: FYPO:0000553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pseudohyphal growth","termid":"FYPO:0003776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased pseudohyphal growth during cellular hyperosmotic response","secondary_identifiers":["FYPO:0000438"],"synonyms":[{"name":"increased filamentous growth during cellular hyperosmotic response","type":"broad"}],"termid":"FYPO:0000553"}


id: GO:1901356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-D-galactofuranose.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose metabolic process","termid":"GO:0006012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"beta-D-galactofuranose metabolic process","synonyms":[{"name":"beta-D-galactofuranose metabolism","type":"exact"}],"termid":"GO:1901356"}


id: FYPO:0001439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing chloramphenicol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on chloramphenicol","synonyms":[{"name":"normal cell population growth in presence of chloramphenicol","type":"exact"},{"name":"normal cell population growth on chloramphenicol","type":"exact"},{"name":"normal cellular response to chloramphenicol","type":"related"},{"name":"normal vegetative cell population growth on chloramphenicol","type":"exact"}],"termid":"FYPO:0001439"}


id: PBO:0042508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 2","termid":"PBO:0042508"}


id: GO:0008019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete macrophage receptor activity (obsolete GO:0008019)","synonyms":[{"name":"macrophage receptor activity","type":"exact"}],"termid":"GO:0008019"}


id: FYPO:0000622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in telophase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic telophase","synonyms":[{"name":"abnormal cell cycle arrest in mitotic telophase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in telophase during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in telophase","type":"exact"},{"name":"mitotic cell cycle progression in telophase: arrested","type":"related"}],"termid":"FYPO:0000622"}


id: GO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"negatively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axonogenesis","synonyms":[{"name":"down regulation of axonogenesis","type":"exact"},{"name":"down-regulation of axonogenesis","type":"exact"},{"name":"downregulation of axonogenesis","type":"exact"},{"name":"inhibition of axonogenesis","type":"narrow"}],"termid":"GO:0050771"}


id: PBO:0083578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter)","termid":"PBO:0083578"}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: PBO:0088660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10","termid":"PBO:0088660"}


id: PBO:0091392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal","termid":"PBO:0091392"}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9","termid":"PBO:0044063"}


id: PBO:0029972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_hydroxyurea","termid":"PBO:0029972"}


id: GO:0001403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A growth pattern exhibited by budding haploid cells under certain growth conditions, in which cells retain the typical axial budding pattern of haploids, but become elongated and fail to separate after division; during growth on a solid substrate, this results in penetration of cells into the agar medium. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["PMID:9728395","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to glucose limitation","synonyms":[{"name":"colony morphology","type":"related"}],"termid":"GO:0001403"}


id: GO:0090304
data:
  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id: PR:Q9UUJ5
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id: GO:0110055
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id: PBO:0087180
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex; physically interacts with transcriptional activator Msn4p, to regulate transcription of AYR1, a gene involved in lipid metabolism","termid":"PBO:0087180"}


id: PBO:0026791
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id: PR:Q9HGK9
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnp20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGK9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C800.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.13","synonyms":[{"name":"Spom972h-cnp20","type":"exact"}],"termid":"PR:Q9HGK9"}


id: PBO:0050049
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id: PBO:0070586
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 52","termid":"PBO:0070586"}


id: PBO:0034653
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id: PBO:0030142
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id: PBO:0084893
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX3 mRNA; acts together with Pet54p and Pet122p; located in the mitochondrial inner membrane","termid":"PBO:0084893"}


id: PBO:0082795
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U4/U6.U5 snRNP complex; involved in pre-mRNA splicing via spliceosome; also required for pre-5S rRNA processing and may act in concert with Rnh70p; has homology to human SART-1","termid":"PBO:0082795"}


id: GO:0050883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"musculoskeletal movement, spinal reflex action","termid":"GO:0050883"}


id: GO:0032838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a plasma membrane bounded cell projection, excluding the plasma membrane surrounding the projection.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic region","termid":"GO:0099568"},{"relation_name":"part_of","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"}


id: FYPO:0006485
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: PBO:0054219
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: GO:1905944
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of growth cone in injured axon.","definition_xrefs":["PMID:19737525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of formation of growth cone in injured axon","termid":"GO:1905942"},{"relation_name":"positively_regulates","term_name":"formation of growth cone in injured axon","termid":"GO:0048689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of growth cone in injured axon","synonyms":[{"name":"activation of formation of growth cone in injured axon","type":"narrow"},{"name":"up regulation of formation of growth cone in injured axon","type":"exact"},{"name":"up-regulation of formation of growth cone in injured axon","type":"exact"},{"name":"upregulation of formation of growth cone in injured axon","type":"exact"}],"termid":"GO:1905944"}


id: PR:P78768
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vti1 gene.","definition_xrefs":["UniProtKB:P78768","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport v-SNARE protein vti1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.10","synonyms":[{"name":"Spom972h-vti1","type":"exact"}],"termid":"PR:P78768"}


id: GO:0048213
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The binding of specific proteins to the t-SNARE/v-SNARE/SNAP25 complex, by which the Golgi vesicle prefusion complex is stabilized.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi vesicle prefusion complex stabilization (obsolete GO:0048213)","synonyms":[{"name":"Golgi vesicle prefusion complex assembly","type":"exact"},{"name":"Golgi-derived vesicle prefusion complex stabilization","type":"exact"},{"name":"dictyosome vesicle prefusion complex stabilisation","type":"narrow"}],"termid":"GO:0048213"}


id: GO:0038086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A/PDGFR signaling","type":"narrow"},{"name":"VEGF-activated PDGFR signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor signalling pathway","type":"exact"},{"name":"VEGF/PDGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0038086"}


id: PBO:0017679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain (predicted)","termid":"PBO:0017679"}


id: GO:0072297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric proximal tubule identity","termid":"GO:0072297"}


id: PBO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin","termid":"PBO:0046259"}


id: GO:0036207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:krc","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone gene expression (obsolete GO:0036207)","synonyms":[{"name":"activation of histone gene expression","type":"narrow"},{"name":"positive regulation of expression of histone-encoding gene","type":"exact"},{"name":"up-regulation of histone gene expression","type":"exact"},{"name":"upregulation of histone gene expression","type":"exact"}],"termid":"GO:0036207"}


id: GO:0048149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ethanol stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ethanol","synonyms":[{"name":"behavioural response to ethanol","type":"exact"}],"termid":"GO:0048149"}


id: PBO:0073129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like 1 pseudogene 1","termid":"PBO:0073129"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: PBO:0059490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSS51 mitochondrial translational activator","termid":"PBO:0059490"}


id: BFO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"b occurs_in c =def b is a process and c is a material entity or immaterial entity& there exists a spatiotemporal region r and b occupies_spatiotemporal_region r.& forall(t) if b exists_at t then c exists_at t & there exist spatial regions s and s’ where & b spatially_projects_onto s at t& c is occupies_spatial_region s’ at t& s is a proper_continuant_part_of s’ at t","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","termid":"BFO:0000066"}


id: PBO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.3","termid":"PBO:0000762"}


id: GO:0010652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication via chemical coupling. Cell communication by chemical coupling is the process that mediates signaling interactions between one cell and another cell by the transfer of small, water-soluble molecules or metabolites between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by chemical coupling","termid":"GO:0010645"},{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"positively_regulates","term_name":"cell communication by chemical coupling","termid":"GO:0010643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication by chemical coupling","termid":"GO:0010652"}


id: PBO:0034502
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_telomere","termid":"PBO:0034502"}


id: PBO:0034292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_eaten_by","termid":"PBO:0034292"}


id: PBO:0028682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope,_with_spindle_pole_body_in_cytoplasm","termid":"PBO:0028682"}


id: GO:0097384
data:
  {"annotated_genes":["SJAG_03929","SJAG_03018","SJAG_02719","SJAG_00770","SJAG_03531","SJAG_00717","SJAG_00624","SJAG_03750","SJAG_04217","SJAG_02982","SJAG_04499","SJAG_02044","SJAG_01307","SJAG_03352","SJAG_03249","SJAG_00453","SJAG_02104","SJAG_03349","SJAG_03509","SJAG_02855","SJAG_04810","SJAG_00413","SJAG_00370","SJAG_04270","SJAG_00580","SJAG_03235","SJAG_04865","SJAG_03715","SJAG_04018","SJAG_01474","SJAG_00235","SJAG_03598","SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100546,105558,107381,114815,111299,85786,84868,95688,90549,88641,102599,103925,84836,94946,103612,92693,84615,90741,105319,94145,106160,100362,103792,107883,112616,100777,110968,87595,88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[89986],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105928],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[84704,101912,84703],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipids, as carried out by individual cells.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cellular lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular lipid anabolism","type":"exact"},{"name":"cellular lipid biosynthesis","type":"exact"},{"name":"cellular lipid formation","type":"exact"},{"name":"cellular lipid synthesis","type":"exact"}],"termid":"GO:0097384","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: PBO:0067979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 281","termid":"PBO:0067979"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["GOC:jl","ISBN:0140513590","GOC:das"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Cellular_respiration#Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION","Wikipedia:Anaerobic_respiration"],"termid":"GO:0009061"}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: GO:1900452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of long-term synaptic depression","synonyms":[{"name":"regulation of LTD","type":"related"},{"name":"regulation of long term depression","type":"broad"},{"name":"regulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900452"}


id: PBO:0031251
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress","termid":"PBO:0031251"}


id: GO:0102755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A15 (closed lactone form) + O2 + 2-oxoglutarate = gibberellin A37 (closed lactone form) + succinate + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin-15(closed lactone form),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating) activity","secondary_identifiers":["MetaCyc:RXN-7680"],"termid":"GO:0102755"}


id: PBO:0002604
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAG acceptor","termid":"PBO:0002604"}


id: PBO:0046042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A","termid":"PBO:0046042"}


id: FYPO:0000024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"stubby vegetative cell","synonyms":[{"name":"cell morphology, stubby cells","type":"exact"},{"name":"stubby cell during mitotic cell cycle","type":"related"},{"name":"stubby cell during vegetative growth","type":"exact"},{"name":"watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0000024"}


id: FYPO:0000066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of L-azetidine-2-carboxylic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to L-azetidine-2-carboxylic acid","synonyms":[{"name":"resistance to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"resistance to AZC","type":"broad"},{"name":"resistance to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"resistance to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"},{"name":"resistant to L-azetidine-2-carboxylic acid","type":"exact"}],"termid":"FYPO:0000066"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: PBO:0087901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulation of invasive growth and starch degradation; controls the activation of FLO11 and STA2 in response to nutritional signals; forms a heterodimer with Flo8p that interacts with the Swi/Snf complex during transcriptional activation of FLO1, FLO11, and STA1","termid":"PBO:0087901"}


id: PBO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-octanoyltransferase","termid":"PBO:0043927"}


id: GO:0031256
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the leading edge of a motile cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"leading edge membrane","termid":"GO:0031256"}


id: PBO:0030473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_glutamine_level","termid":"PBO:0030473"}


id: GO:0071931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases transcription as part of the G1/S transition of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G1/S transition of mitotic cell cycle (obsolete GO:0071931)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter during G1/S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0071931"}


id: PBO:0056404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 2","termid":"PBO:0056404"}


id: PBO:0090786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh1","termid":"PBO:0090786"}


id: GO:0035199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific avoidance actions or reactions of an organism in response to the perception of salt.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salt aversion","synonyms":[{"name":"behavioral response to salt","type":"broad"}],"termid":"GO:0035199"}


id: GO:1905644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of FACT complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"FACT complex assembly","termid":"GO:1905635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of FACT complex assembly","synonyms":[{"name":"regulation of FACT complex formation","type":"exact"},{"name":"regulation of Facilitates chromatin transcription complex assembly","type":"exact"},{"name":"regulation of Facilitates chromatin transcription complex formation","type":"exact"}],"termid":"GO:1905644"}


id: PBO:0046831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 4","termid":"PBO:0046831"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor zip1 phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: PBO:0041342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 49","termid":"PBO:0041342"}


id: GO:2000224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of testosterone biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"testosterone biosynthetic process","termid":"GO:0061370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of testosterone biosynthetic process","termid":"GO:2000224"}


id: PR:Q9HDV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-specific demethylase 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component lid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.06","secondary_identifiers":["UniProtKB:Q9HDV4"],"synonyms":[{"name":"Lid2C component lid2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBP19A11.06","type":"related"},{"name":"Spom972h-KDM5A","type":"exact"}],"termid":"PR:Q9HDV4"}


id: PBO:0055593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3029","termid":"PBO:0055593"}


id: PBO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomerase_template_activity","termid":"PBO:0034480"}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: PATO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000256 taste type (obsolete PATO:0000256)","termid":"PATO:0000256"}


id: CHEBI:32588
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a K(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium chloride","termid":"CHEBI:32588"}


id: RO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two material entities in a system of connected structures, where the branching relationship holds based on properties of the connecting network.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_branching_relationship_with","termid":"RO:0002375"}


id: PBO:0057807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3129","termid":"PBO:0057807"}


id: FYPO:0006844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in centromeric regions is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:28904333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal H2A.Z level at centromere","synonyms":[{"name":"normal H2A.Z level at centromere during mitotic cell cycle","type":"related"},{"name":"normal H2A.Z level at centromere during vegetative growth","type":"exact"},{"name":"normal H2A.Z level in chromatin at centromere","type":"exact"}],"termid":"FYPO:0006844"}


id: PBO:0068299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5 pseudogene 1","termid":"PBO:0068299"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: PBO:0054957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2371","termid":"PBO:0054957"}


id: MOD:00752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with ADP-ribose through formation of a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","synonyms":[{"name":"ADP-rybosylation (from NAD)","type":"exact"},{"name":"ADPRibRes","type":"exact"}],"termid":"MOD:00752"}


id: PR:O74562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04337","PANTHER:PTHR14146:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.09","secondary_identifiers":["UniProtKB:O74562"],"synonyms":[{"name":"Spom972h-EXOC4","type":"exact"}],"termid":"PR:O74562"}


id: PBO:0035799
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation_with_unseparated_chromosomes","termid":"PBO:0035799"}


id: PBO:0065243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR15 divergent transcript","termid":"PBO:0065243"}


id: PBO:0039887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 4","termid":"PBO:0039887"}


id: PBO:0012856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp43","termid":"PBO:0012856"}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["EC:6.2.1.6","RHEA:14169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["MetaCyc:GLUTARATE--COA-LIGASE-RXN","KEGG_REACTION:R02402"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: GO:1904139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell migration.","definition_xrefs":["PMID:19100238","GO_REF:0000058","GOC:nc","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell migration","termid":"GO:1904139"}


id: PBO:0045789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal protein 3D, pseudogene","termid":"PBO:0045789"}


id: GO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single female gonial founder cell.","definition_xrefs":["PMID:10370240","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst formation","synonyms":[{"name":"female germline cyst formation","type":"exact"}],"termid":"GO:0048135"}


id: GO:0140562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyses the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-xylosyl)-L-serine.","definition_xrefs":["RHEA:62016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"EGF-domain serine xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.63"],"termid":"GO:0140562"}


id: PBO:0087908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor for glycerol biosynthetic genes; required for the transient induction of glycerol biosynthetic genes GPD1 and GPP2 in response to high osmolarity; targets Hog1p to osmostress responsive promoters; has similarity to Msn1p and Gcr1p","termid":"PBO:0087908"}


id: PBO:0061062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 2","termid":"PBO:0061062"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: GO:0050348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 alpha,alpha'-trehalose 6-mycolate = alpha,alpha'-trehalose 6,6'-bismycolate + alpha,alpha-trehalose.","definition_xrefs":["EC:2.3.1.122","RHEA:23472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"trehalose O-mycolyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07248","MetaCyc:RXN1G-874"],"synonyms":[{"name":"alpha,alpha'-trehalose 6-monomycolate:alpha,alpha'-trehalose mycolyltransferase activity","type":"related"},{"name":"alpha,alpha'-trehalose-6-mycolate:alpha,alpha'-trehalose-6-mycolate 6'-mycolyltransferase activity","type":"related"}],"termid":"GO:0050348"}


id: PBO:0072489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 18","termid":"PBO:0072489"}


id: GO:0098896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome membrane","termid":"GO:0031901"},{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic early endosome","termid":"GO:0098842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"postsynaptic early endosome membrane","termid":"GO:0098896"}


id: GO:0009276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The peptidoglycan layer of the Gram-negative cell envelope. In Gram-negative cells the peptidoglycan is relatively thin (1-2nm) and is linked to the outer membrane by lipoproteins. In Gram-negative cells the peptidoglycan is too thin to retain the primary stain in the Gram staining procedure and therefore cells appear red after Gram stain.","definition_xrefs":["ISBN:0815108893","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan-based cell wall","termid":"GO:0009274"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell wall","synonyms":[{"name":"1-2nm peptidoglycan-based cell wall","type":"exact"},{"name":"cell wall inner membrane","type":"exact"}],"termid":"GO:0009276"}


id: GO:0099046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from DNA or RNA from an invading organism.","definition_xrefs":["GO:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}


id: GO:0008815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = acetate + oxaloacetate.","definition_xrefs":["RHEA:10760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"citrate (pro-3S)-lyase activity","secondary_identifiers":["MetaCyc:CITLY-RXN","KEGG_REACTION:R00362","EC:4.1.3.6"],"synonyms":[{"name":"citrase activity","type":"related"},{"name":"citratase activity","type":"related"},{"name":"citrate aldolase activity","type":"related"},{"name":"citrate lyase","type":"narrow"},{"name":"citrate lyase activity","type":"exact"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COO-->acetate]","type":"related"},{"name":"citrate oxaloacetate-lyase activity","type":"related"},{"name":"citric aldolase activity","type":"related"},{"name":"citridesmolase activity","type":"related"},{"name":"citritase activity","type":"related"}],"termid":"GO:0008815"}


id: PBO:0081549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 469","termid":"PBO:0081549"}


id: PR:O74135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.05","synonyms":[{"name":"Spom972h-cki3","type":"exact"}],"termid":"PR:O74135"}


id: PBO:0053717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 927","termid":"PBO:0053717"}


id: PR:O74920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph2 gene.","definition_xrefs":["UniProtKB:O74920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vph2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.10","synonyms":[{"name":"Spom972h-vph2","type":"exact"}],"termid":"PR:O74920"}


id: PBO:0079974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 12","termid":"PBO:0079974"}


id: PBO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DST antisense RNA 1","termid":"PBO:0045507"}


id: GO:0019163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine 5'-phosphate + 2-oxoglutarate = pyridoxal 5'-phosphate + D-glutamate.","definition_xrefs":["EC:2.6.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pyridoxamine-phosphate transaminase activity","secondary_identifiers":["RHEA:15877","MetaCyc:PYRDAMPTRANS-RXN"],"synonyms":[{"name":"pyridoxamine 5'-phosphate transaminase activity","type":"related"},{"name":"pyridoxamine 5'-phosphate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"pyridoxamine phosphate aminotransferase activity","type":"related"},{"name":"pyridoxamine-5'-phosphate:2-oxoglutarate aminotransferase (D-glutamate-forming)","type":"related"},{"name":"pyridoxamine-phosphate aminotransferase activity","type":"exact"}],"termid":"GO:0019163"}


id: FYPO:0000653
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects DNA binding. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"DNA binding phenotype","synonyms":[{"name":"fission yeast DNA binding phenotype","type":"exact"}],"termid":"FYPO:0000653"}


id: PBO:0075283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 24","termid":"PBO:0075283"}


id: PBO:0056914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC-induced long non-coding RNA","termid":"PBO:0056914"}


id: GO:0006012
data:
  {"annotated_genes":["SJAG_03818","SJAG_02950","SJAG_02954","SJAG_01209","SJAG_01784","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105672,109787,109793,109794,109805],"is_not":false,"summary":null,"term":"GO:0006012"},{"annotations":[104975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019388"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01209":null,"SJAG_01784":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Galactose"],"synonyms":[{"name":"galactose metabolism","type":"exact"}],"termid":"GO:0006012","terms_by_termid":{"GO:0006012":null,"GO:0019388":null}}


id: PATO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of time that a viviparous organism has given birth.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parity","termid":"PATO:0002370"}


id: GO:0140782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novofumigatonin, a heavily oxygenated meroterpenoid containing a unique orthoester moiety.","definition_xrefs":["PMID:29968715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"novofumigatonin biosynthetic process","synonyms":[{"name":"novofumigatonin anabolism","type":"exact"},{"name":"novofumigatonin biosynthesis","type":"exact"},{"name":"novofumigatonin formation","type":"exact"},{"name":"novofumigatonin synthesis","type":"exact"}],"termid":"GO:0140782"}


id: PBO:0081997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 30","termid":"PBO:0081997"}


id: PBO:0074045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 27","termid":"PBO:0074045"}


id: PBO:0066407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RELB proto-oncogene, NF-kB subunit","termid":"PBO:0066407"}


id: GO:0015375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + Na+(out) = glycine(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid:sodium symporter activity","termid":"GO:0005295"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"glycine transmembrane transporter activity","termid":"GO:0015187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycine:sodium symporter activity","secondary_identifiers":["GO:0015656","Reactome:R-HSA-5660840","Reactome:R-HSA-444120","RHEA:68228"],"termid":"GO:0015375"}


id: PBO:0048036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicle stimulating hormone subunit beta","termid":"PBO:0048036"}


id: FYPO:0001143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Man9GlcNAc2 measured in a cell is normal (i.e. indistinguishable from wild type). Man9GlcNAc2 is any N-glycan that consists of a branched undecasaccharide consisting of nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["PMID:12686557","CHEBI:59579","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal Man9GlcNAc level","synonyms":[{"name":"normal Man9GlcNAc accumulation","type":"related"},{"name":"normal Man9GlcNAc level during mitotic cell cycle","type":"related"},{"name":"normal Man9GlcNAc level during vegetative growth","type":"exact"},{"name":"normal Man9GlcNAc2 level","type":"exact"},{"name":"normal cellular Man9GlcNAc level","type":"exact"}],"termid":"FYPO:0001143"}


id: GO:0098600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-Selenomethionine + H2O => Methaneselenol + Ammonia + 2-oxobutanoic acid.","definition_xrefs":["PMID:16444005","PMID:11578145","PMID:16037612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"selenomethionine gamma-lyase activity","secondary_identifiers":["Reactome:R-HSA-2408537"],"termid":"GO:0098600"}


id: GO:0070086
data:
  {"annotated_genes":["SJAG_00032","SJAG_04051","SJAG_02789","SJAG_03643","SJAG_04466","SJAG_00803","SJAG_01686","SJAG_03404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88308,92394,101791,104139,107104,108389,113581,114904],"is_not":false,"summary":null,"term":"GO:0070086"}]},"cv_name":"biological_process","definition":"Endocytosis of a protein that requires the substrate to be modified by ubiquitination. Several plasma membrane proteins, including cell surface permeases and some receptors, are targeted for internalization by endocytosis, and are thereafter delivered to the vacuole or lysosome, where they are degraded.","definition_xrefs":["PMID:9409540","GOC:jp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00032":null,"SJAG_00803":null,"SJAG_01686":null,"SJAG_02789":null,"SJAG_03404":null,"SJAG_03643":null,"SJAG_04051":null,"SJAG_04466":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-mediated endocytosis","type":"exact"}],"termid":"GO:0070086","terms_by_termid":{"GO:0070086":null}}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: PBO:0052981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactamase beta like 1","termid":"PBO:0052981"}


id: GO:0016558
data:
  {"annotated_genes":["SJAG_02693","SJAG_03440","SJAG_02997","SJAG_00326","SJAG_02797","SJAG_05315","SJAG_01165","SJAG_00702","SJAG_00891","SJAG_03324","SJAG_01854","SJAG_02619","SJAG_02034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62851,86346,86549,92574,94333,101316,106123,107466],"is_not":false,"summary":null,"term":"GO:0016558"},{"annotations":[99185,107927,93060],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[97401,113366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"}]},"cv_name":"biological_process","definition":"The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported. The cargo protein is then released into the peroxisome matrix.","definition_xrefs":["PMID:11988772","ISBN:0716731363","PMID:11687502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane transport","termid":"GO:0015919"},{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085","GO:0007031"],"is_obsolete":false,"name":"protein import into peroxisome matrix","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome matrix protein import","type":"exact"},{"name":"protein transport to peroxisome matrix","type":"exact"}],"termid":"GO:0016558","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null}}


id: GO:0019172
data:
  {"annotated_genes":["SJAG_02988","SJAG_04404","SJAG_02106","SJAG_04674"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84116,88544,89222,89223,108888],"is_not":false,"summary":null,"term":"GO:0019172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: methylglyoxal + H2O = D-lactate.","definition_xrefs":["GOC:mcc","PMID:21696459","PMID:7848303","RHEA:27754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glyoxalase III activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.2.1.130","MetaCyc:GLYOXIII-RXN"],"synonyms":[{"name":"glutathione-independent glyoxalase activity","type":"related"},{"name":"(R)-lactate hydro-lyase","type":"exact"},{"name":"D-lactate dehydratase","type":"exact"}],"termid":"GO:0019172","terms_by_termid":{"GO:0019172":null}}


id: PBO:0005892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 6 (predicted)","termid":"PBO:0005892"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","secondary_identifiers":["MetaCyc:ASCORBATE-23-DIOXYGENASE-RXN","KEGG_REACTION:R00646"],"synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: GO:0141133
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113513],"is_not":false,"summary":null,"term":"GO:0141133"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-[(3S)-amino-3-carboxypropyl]-L-histidyl-[translation elongation factor 2] + 4 S-adenosyl-L-methionine = diphthine methyl ester-[translation elongation factor 2] + 3 H+ + 4 S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:42652","PMID:24739148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0008276","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"diphthine methyl ester synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.314","MetaCyc:RXN-15775"],"termid":"GO:0141133","terms_by_termid":{"GO:0141133":null}}


id: GO:0062104
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100996],"is_not":false,"summary":null,"term":"GO:0062104"}]},"cv_name":"molecular_function","definition":"Binding to a region of RNA containing a Pumilio-response element element. The consensus sequence for the element is UGUAAAUA.","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"pumilio-response element binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PRE binding","type":"exact"}],"termid":"GO:0062104","terms_by_termid":{"GO:0062104":null}}


id: PBO:0011497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin, rRNA methyltransferase","termid":"PBO:0011497"}


id: PBO:0055382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2812","termid":"PBO:0055382"}


id: GO:0033134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ubiquitin activating enzyme, any of the E1 proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small protein activating enzyme binding","termid":"GO:0044388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquitin activating enzyme binding","termid":"GO:0033134"}


id: PBO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp14 (predicted)","termid":"PBO:0001024"}


id: PBO:0063248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 13","termid":"PBO:0063248"}


id: PBO:0071932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 9","termid":"PBO:0071932"}


id: PBO:0076398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit A","termid":"PBO:0076398"}


id: GO:0010407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein where other amino acids besides Hyp, Ala, Ser, Thr and Gly can be present and grouped into regions, such as a Cys-rich or Asn-rich domains.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinogalactan protein metabolic process","termid":"GO:0010405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"non-classical arabinogalactan protein metabolic process","synonyms":[{"name":"non-classical arabinogalactan protein metabolism","type":"exact"}],"termid":"GO:0010407"}


id: PBO:0046166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF3 antisense RNA 1","termid":"PBO:0046166"}


id: GO:0085017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invasion by a symbiont of a cell of a host organism, forming a vacuole in which the symbiont resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ends when the host cell membrane closes behind the newly-formed vacuole.","definition_xrefs":["PMID:9580555","GOC:jl","PMID:18665841","PMID:8690024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host cell by a symbiont-containing vacuole","secondary_identifiers":["GO:0052370"],"synonyms":[{"name":"symbiont entry into host cell forming a parasitophorous vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a pathogen-containing vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a symbiont-containing vacuole","type":"related"}],"termid":"GO:0085017"}


id: PBO:0003031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of RNA-mediated gene silencing","termid":"PBO:0003031"}


id: PATO:0000069
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the whether the bearer differs from normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation(from_normal)","termid":"PATO:0000069"}


id: PBO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family (predicted)","termid":"PBO:0002447"}


id: PBO:0061776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoconin 90","termid":"PBO:0061776"}


id: PBO:0062708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 2","termid":"PBO:0062708"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: GO:1902405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any actomyosin contractile ring localization that is involved in mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic actomyosin contractile ring localization (obsolete GO:1902405)","termid":"GO:1902405"}


id: GO:1900024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substrate adhesion-dependent cell spreading.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"substrate adhesion-dependent cell spreading","termid":"GO:0034446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of substrate adhesion-dependent cell spreading","synonyms":[{"name":"regulation of cell spreading during cell substrate adhesion","type":"exact"},{"name":"regulation of substrate adhesion dependent cell spreading","type":"exact"}],"termid":"GO:1900024"}


id: GO:0110139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of imaginal disc-derived leg joint morphogenesis.","definition_xrefs":["PMID:25329825","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110137"},{"relation_name":"negatively_regulates","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of imaginal disc-derived leg joint morphogenesis","termid":"GO:0110139"}


id: PBO:0073611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 2","termid":"PBO:0073611"}


id: PBO:0055091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2509","termid":"PBO:0055091"}


id: PBO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export adaptor Nmd3","termid":"PBO:0090391"}


id: GO:0051253
data:
  {"annotated_genes":["SJAG_04268","SJAG_04607","SJAG_01230","SJAG_04586","SJAG_03448","SJAG_01331","SJAG_00266","SJAG_03067","SJAG_01254","SJAG_00142","SJAG_01157","SJAG_03319","SJAG_03911","SJAG_04249","SJAG_00124","SJAG_00987","SJAG_02730","SJAG_04613","SJAG_01311","SJAG_04946","SJAG_00792","SJAG_04539","SJAG_03845","SJAG_02752","SJAG_03081","SJAG_02104","SJAG_02858","SJAG_03143","SJAG_04026","SJAG_00410","SJAG_04312","SJAG_04584","SJAG_01199","SJAG_03473","SJAG_02385","SJAG_01728","SJAG_01707","SJAG_03696","SJAG_01680","SJAG_02846","SJAG_00290","SJAG_00969","SJAG_02444","SJAG_04039","SJAG_00163","SJAG_02255","SJAG_04512","SJAG_02573","SJAG_03283","SJAG_02981","SJAG_03883","SJAG_00861","SJAG_00996","SJAG_04825","SJAG_01799","SJAG_00802","SJAG_02898","SJAG_04186","SJAG_00926","SJAG_04381","SJAG_01000","SJAG_04921","SJAG_00797","SJAG_01804","SJAG_00441"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77685,114354,86313,96188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[71022,102325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"},{"annotations":[85610,92354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[104048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[97170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[85611,85212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[102378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[99655,104050,97092,108168,90828,100052,89987,90166,101978,102576,90335,106803,100353,86173,112142,90748,102804,79269,103077,102565,111694,84977,100286,83731,87360,98874,104650,97942,102327,105093,109908,110645,89843,88259,87288,89391,89883,94982,104312,92386,88236,97070,113427,109054,101886,110332,89491,101103,104535,107218,102821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[92493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[97093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[113979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[86754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"negatively_regulates","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00797":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01331":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02573":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03283":null,"SJAG_03319":null,"SJAG_03448":null,"SJAG_03473":null,"SJAG_03696":null,"SJAG_03845":null,"SJAG_03883":null,"SJAG_03911":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04586":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04825":null,"SJAG_04921":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA metabolic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA metabolic process","type":"exact"},{"name":"down-regulation of RNA metabolic process","type":"exact"},{"name":"downregulation of RNA metabolic process","type":"exact"},{"name":"inhibition of RNA metabolic process","type":"narrow"},{"name":"negative regulation of RNA metabolism","type":"exact"}],"termid":"GO:0051253","terms_by_termid":{"GO:0000122":null,"GO:0000433":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0048255":null,"GO:0060195":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null}}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 45 pseudogene","termid":"PBO:0062095"}


id: GO:1900693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of (+)-kotanin biosynthetic process","termid":"GO:1900692"},{"relation_name":"negatively_regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"down regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down regulation of (+)-kotanin formation","type":"exact"},{"name":"down regulation of (+)-kotanin synthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin anabolism","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"down-regulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"down-regulation of (+)-kotanin formation","type":"exact"},{"name":"down-regulation of (+)-kotanin synthesis","type":"exact"},{"name":"downregulation of (+)-kotanin anabolism","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"downregulation of (+)-kotanin biosynthetic process","type":"exact"},{"name":"downregulation of (+)-kotanin formation","type":"exact"},{"name":"downregulation of (+)-kotanin synthesis","type":"exact"},{"name":"inhibition of (+)-kotanin anabolism","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthesis","type":"exact"},{"name":"inhibition of (+)-kotanin biosynthetic process","type":"narrow"},{"name":"inhibition of (+)-kotanin formation","type":"exact"},{"name":"inhibition of (+)-kotanin synthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin anabolism","type":"exact"},{"name":"negative regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"negative regulation of (+)-kotanin formation","type":"exact"},{"name":"negative regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900693"}


id: GO:0090561
data:
  {"annotated_genes":["SJAG_01613","SJAG_02431","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93755,95330],"is_not":false,"summary":null,"term":"GO:0090561"},{"annotations":[90520],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The dynein-driven microtubule based nuclear migration, whereby daughter nuclei are positioned away from the cell division site prior to cytokinesis.","definition_xrefs":["GOC:vw","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02431":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090561","terms_by_termid":{"GO:0090561":null,"GO:1902854":null}}


id: GO:0033739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-aminomethyl-7-deazaguanine + 2 NADP+ = 7-cyano-7-deazaguanine + 3 H+ + 2 NADPH.","definition_xrefs":["EC:1.7.1.13","RHEA:13409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"preQ1 synthase activity","secondary_identifiers":["KEGG_REACTION:R07605","MetaCyc:RXN0-4022"],"synonyms":[{"name":"7-aminomethyl-7-carbaguanine:NADP+ oxidoreductase activity","type":"exact"},{"name":"7-cyano-7-deazaguanine reductase activity","type":"related"},{"name":"QueF","type":"related"},{"name":"YkvM","type":"related"},{"name":"preQ0 oxidoreductase activity","type":"related"},{"name":"preQ0 reductase activity","type":"related"},{"name":"queuine synthase activity","type":"related"},{"name":"queuine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033739"}


id: PBO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processive helicase activity of Mcm4/6/7 complex requires 3' and 5' overhangs","termid":"PBO:0012046"}


id: GO:0018881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bromoxynil, C7H3Br2NO, a dibrominated phenol derivative with a cyano (-CN) group attached. Bromoxynil is used as a herbicide for post-emergent control of annual broadleaf weeds and works by inhibiting photosynthesis in the target plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bromoxynil metabolic process","secondary_identifiers":["UM-BBD_pathwayID:box"],"synonyms":[{"name":"bromoxynil metabolism","type":"exact"}],"termid":"GO:0018881"}


id: GO:1901780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentalenolactone.","definition_xrefs":["PMID:17178094","GOC:yaf","GOC:TermGenie","UniPathway:UPA00974","MetaCyc:PWY-6915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pentalenolactone biosynthetic process","synonyms":[{"name":"pentalenolactone anabolism","type":"exact"},{"name":"pentalenolactone biosynthesis","type":"exact"},{"name":"pentalenolactone formation","type":"exact"},{"name":"pentalenolactone synthesis","type":"exact"}],"termid":"GO:1901780"}


id: GO:0033743
data:
  {"annotated_genes":["SJAG_00365"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102679],"is_not":false,"summary":null,"term":"GO:0033743"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptide-L-methionine + H2O + thioredoxin disulfide = peptide-L-methionine (R)-S-oxide + thioredoxin. Can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["GOC:vw","GOC:mah","RHEA:24164","EC:1.8.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00365":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide-methionine (R)-S-oxide reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676917","KEGG_REACTION:R07607","GO:0000318","MetaCyc:1.8.4.12-RXN"],"synonyms":[{"name":"MsrB","type":"related"},{"name":"PilB","type":"related"},{"name":"SelR","type":"related"},{"name":"SelX","type":"related"},{"name":"methionine S-oxide reductase (R-form oxidizing) activity","type":"related"},{"name":"methionine S-oxide reductase activity","type":"broad"},{"name":"methionine sulfoxide reductase B activity","type":"narrow"},{"name":"methionine sulfoxide reductase activity","type":"broad"},{"name":"pMRsr","type":"related"},{"name":"pMSR","type":"related"},{"name":"peptide-methionine:thioredoxin-disulfide S-oxidoreductase [methionine (R)-S-oxide-forming] activity","type":"related"},{"name":"protein-methionine-R-oxide reductase activity","type":"exact"},{"name":"selenoprotein R","type":"related"}],"termid":"GO:0033743","terms_by_termid":{"GO:0033743":null}}


id: PR:Q9Y7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1539.02 gene.","definition_xrefs":["UniProtKB:Q9Y7Z6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein C1539.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.02","synonyms":[{"name":"Spom972h-SPBC1539.02","type":"exact"}],"termid":"PR:Q9Y7Z6"}


id: PBO:0035774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_microtubule_dwell_time_at_cell_tip","termid":"PBO:0035774"}


id: GO:1900013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell in response to the presence of 3',5'-cAMP that results in a change in state or activity (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.","definition_xrefs":["PMID:21239624","GOC:TermGenie","GOC:pf","PMID:19363786"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to potassium ion involved in chemotaxis to cAMP (obsolete GO:1900013)","synonyms":[{"name":"cellular response to K+ ion of chemotaxis to 3',5' cAMP","type":"exact"},{"name":"cellular response to K+ ion of chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"cellular response to K+ ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to K+ ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to K+ ion of chemotaxis to cyclic AMP","type":"exact"},{"name":"cellular response to potassium ion involved in chemotaxis to cAMP","type":"exact"},{"name":"cellular response to potassium ion of chemotaxis to 3',5' cAMP","type":"related"},{"name":"cellular response to potassium ion of chemotaxis to 3',5'-cAMP","type":"related"},{"name":"cellular response to potassium ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"related"},{"name":"cellular response to potassium ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to potassium ion of chemotaxis to cyclic AMP","type":"related"},{"name":"cellular response to potassium of chemotaxis to 3',5' cAMP","type":"exact"},{"name":"cellular response to potassium of chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"cellular response to potassium of chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to potassium of chemotaxis to cAMP","type":"related"},{"name":"cellular response to potassium of chemotaxis to cyclic AMP","type":"exact"}],"termid":"GO:1900013"}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: GO:0097684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The anterior most point of a dinoflagellate hypocone.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dinoflagellate hypocone","termid":"GO:0097614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapex","synonyms":[{"name":"antapex","type":"broad"}],"termid":"GO:0097684"}


id: PBO:0041058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 9","termid":"PBO:0041058"}


id: PBO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 2","termid":"PBO:0044305"}


id: GO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid catabolic process","synonyms":[{"name":"alkaloid breakdown","type":"exact"},{"name":"alkaloid catabolism","type":"exact"},{"name":"alkaloid degradation","type":"exact"}],"termid":"GO:0009822"}


id: SO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"wild_type","termid":"SO:0000817"},{"relation_name":"is_a","term_name":"rescue_gene","termid":"SO:0000816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type_rescue_gene","synonyms":[{"name":"wild type rescue gene","type":"exact"}],"termid":"SO:0000818"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: GO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002301"}


id: FYPO:0003537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of premeiotic DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of premeiotic DNA replication","synonyms":[{"name":"reduced rate of premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0003537"}


id: PBO:0028878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2B-K119_ubiquitination","termid":"PBO:0028878"}


id: GO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CDK activity.","definition_xrefs":["GOC:pr","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein kinase activity","termid":"GO:1904031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"positive regulation of CDK activity","type":"broad"},{"name":"positive regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up-regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"upregulation of cyclin-dependent protein kinase activity","type":"broad"}],"termid":"GO:0045737"}


id: PBO:0035827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane_during_vegetative_growth","termid":"PBO:0035827"}


id: PBO:0049018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B pseudogene 3","termid":"PBO:0049018"}


id: PBO:0002997
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.22","termid":"PBO:0002997"}


id: GO:0030458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Fungi) (obsolete GO:0030458)","synonyms":[{"name":"activation of MAPKKK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030458"}


id: PBO:0065864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB21, member RAS oncogene family","termid":"PBO:0065864"}


id: PBO:0072725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RYK pseudogene 1","termid":"PBO:0072725"}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["RESID:AA0595","PubMed:11572972","PubMed:19833098","PubMed:10830969","ChEBI:2311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: GO:0099099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ion channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:35704701","GOC:dos","Wikipedia:G_protein-gated_ion_channel"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated monoatomic ion channel activity","synonyms":[{"name":"G-protein gated ion channel activity","type":"broad"}],"termid":"GO:0099099"}


id: GO:0030816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP metabolic process (obsolete GO:0030816)","synonyms":[{"name":"activation of cAMP metabolic process","type":"narrow"},{"name":"positive regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"positive regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"positive regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"positive regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"positive regulation of cAMP metabolism","type":"exact"},{"name":"positive regulation of cyclic AMP metabolic process","type":"exact"},{"name":"positive regulation of cyclic AMP metabolism","type":"exact"},{"name":"stimulation of cAMP metabolic process","type":"narrow"},{"name":"up regulation of cAMP metabolic process","type":"exact"},{"name":"up-regulation of cAMP metabolic process","type":"exact"},{"name":"upregulation of cAMP metabolic process","type":"exact"}],"termid":"GO:0030816"}


id: PATO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ictal","termid":"PATO:0001913"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: PR:O13600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sws1 gene.","definition_xrefs":["UniProtKB:O13600","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM domain-containing protein sws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.06","synonyms":[{"name":"SWIM domain-containing and srs2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sws1","type":"exact"}],"termid":"PR:O13600"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: PBO:0082328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the ATP-binding cassette (ABC) family; involved in 40S and 60S ribosome biogenesis, has similarity to Gcn20p; important for disaggregation of ordered and disordered aggregates; shuttles from nucleus to cytoplasm, physically interacts with Tif6p, Lsg1p; human homolog ABCF2 can complement yeast ARB1 mutant","termid":"PBO:0082328"}


id: PR:Q10338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C582.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.04c","synonyms":[{"name":"Spom972h-dsh1","type":"exact"}],"termid":"PR:Q10338"}


id: PBO:0064289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like A (pseudogene)","termid":"PBO:0064289"}


id: GO:0018013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal glycine of proteins to form the derivative N-methylglycine.","definition_xrefs":["RESID:AA0063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine methylation","termid":"GO:0018013"}


id: PBO:0077664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 11a","termid":"PBO:0077664"}


id: GO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in ureteric bud development","termid":"GO:0072099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ureteric bud anterior/posterior symmetry","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry","type":"exact"}],"termid":"GO:0072100"}


id: PR:O13298
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hos2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase phd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.07c","synonyms":[{"name":"Spom972h-hos2","type":"exact"}],"termid":"PR:O13298"}


id: PBO:0060819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1","termid":"PBO:0060819"}


id: GO:0106093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.","definition_xrefs":["PMID:16040633","PMID:11574472","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EDS1 disease-resistance complex","synonyms":[{"name":"EDS1-PAD4 complex","type":"narrow"},{"name":"EDS1-PAD4-SAG101 complex","type":"narrow"},{"name":"EDS1-SAG101 complex","type":"narrow"}],"termid":"GO:0106093"}


id: PBO:0112882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex), Kgd1","termid":"PBO:0112882"}


id: GO:2000812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament polymerization","termid":"GO:0030833"},{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0030036","GO:0065003","GO:0007010"],"is_obsolete":false,"name":"regulation of barbed-end actin filament capping","synonyms":[{"name":"regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"regulation of barbed-end actin capping activity","type":"exact"},{"name":"regulation of plus-end F-actin capping activity","type":"exact"},{"name":"regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000812"}


id: SO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000916 edit_operation (obsolete SO:0000916)","synonyms":[{"name":"edit operation","type":"exact"}],"termid":"SO:0000916"}


id: PATO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000971 absolute permeability (obsolete PATO:0000971)","termid":"PATO:0000971"}


id: GO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + NADP+ + pyruvate = acetyl-CoA + CO2 + NADPH.","definition_xrefs":["RHEA:17425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:PYRUVATE-DEHYDROGENASE-NADP+-RXN","EC:1.2.1.51","KEGG_REACTION:R00210"],"synonyms":[{"name":"pyruvate:NADP(+) oxidoreductase activity","type":"related"},{"name":"pyruvate:NADP+ 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050243"}


id: FYPO:0003624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003624)","synonyms":[{"name":"decreased protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003624"}


id: PBO:0049636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 39","termid":"PBO:0049636"}


id: PBO:0087529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; conserved region at N-terminus is essential for interaction with the NPC (nucleosome core particle); required for autophagy; homologous to Drosophila Enhancer of Polycomb; coding sequence contains length polymorphisms in different strains","termid":"PBO:0087529"}


id: PBO:0075928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 20","termid":"PBO:0075928"}


id: PBO:0069406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 666, pseudogene","termid":"PBO:0069406"}


id: PBO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 12, pseudogene","termid":"PBO:0070055"}


id: PBO:0013772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp101","termid":"PBO:0013772"}


id: GO:0016782
data:
  {"annotated_genes":["SJAG_03553","SJAG_03701","SJAG_03896","SJAG_01935","SJAG_02985","SJAG_00358","SJAG_03932","SJAG_02769","SJAG_01239","SJAG_04113","SJAG_01302","SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016784"},{"annotations":[87546,75585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008775"},{"annotations":[110174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004076"},{"annotations":[102958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031071"},{"annotations":[113908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036455"},{"annotations":[108767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016992"},{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008260"},{"annotations":[113028,92099,94361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004792"},{"annotations":[90374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061708"},{"annotations":[90375,101934,104493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0103016"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a sulfur-containing group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01239":null,"SJAG_01302":null,"SJAG_01935":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03553":null,"SJAG_03701":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"transferase activity, transferring sulphur-containing groups","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.8.-.-"],"termid":"GO:0016782","terms_by_termid":{"GO:0004076":null,"GO:0004792":null,"GO:0008260":null,"GO:0008775":null,"GO:0016784":null,"GO:0016992":null,"GO:0031071":null,"GO:0036455":null,"GO:0061708":null,"GO:0103016":null}}


id: GO:0050931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell differentiation","secondary_identifiers":["GO:0043358","GO:0043357"],"synonyms":[{"name":"chromatophore differentiation","type":"exact"},{"name":"pigmented cell differentiation","type":"exact"}],"termid":"GO:0050931"}


id: PR:Q9Y7X6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ish1 gene.","definition_xrefs":["UniProtKB:Q9Y7X6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein ish1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.12c","synonyms":[{"name":"Spom972h-ish1","type":"exact"}],"termid":"PR:Q9Y7X6"}


id: GO:0006105
data:
  {"annotated_genes":["SJAG_03574","SJAG_03434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109200],"is_not":false,"summary":null,"term":"GO:0006105"},{"annotations":[87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03434":null,"SJAG_03574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"succinate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"succinate metabolism","type":"exact"}],"termid":"GO:0006105","terms_by_termid":{"GO:0006105":null,"GO:0006540":null}}


id: PBO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 4 pseudogene","termid":"PBO:0062066"}


id: PBO:0035704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Zeocin","termid":"PBO:0035704"}


id: GO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv alpha subunits 4.2 and 4.3.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Kv4.2-Kv4.3 channel complex","secondary_identifiers":["CORUM:609"],"termid":"GO:0071197"}


id: PBO:0080788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, C-terminal like pseudogene","termid":"PBO:0080788"}


id: PBO:0000878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family protein Yip12","termid":"PBO:0000878"}


id: GO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, or rate of heme oxygenase activity.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:24844779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heme oxygenase activity","termid":"GO:0061960"}


id: PBO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase (predicted)","termid":"PBO:0001620"}


id: GO:0102905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (+)-valencene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.73","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valencene synthase activity","secondary_identifiers":["RHEA:29511","MetaCyc:RXN-8608"],"termid":"GO:0102905"}


id: GO:0070791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cleistothecium over time, from its formation to the mature structure. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["ISBN:0471522295","PMID:17446882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cleistothecium development","termid":"GO:0070791"}


id: PBO:0053718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 928","termid":"PBO:0053718"}


id: GO:0098976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synaptic transmission that results in an excitatory postsynaptic potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"excitatory chemical synaptic transmission","termid":"GO:0098976"}


id: GO:0047970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanidinoacetate + H2O = glycine + urea.","definition_xrefs":["EC:3.5.3.2","RHEA:23268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"guanidinoacetase activity","secondary_identifiers":["KEGG_REACTION:R00775","MetaCyc:GUANIDINOACETASE-RXN"],"synonyms":[{"name":"glycocyaminase activity","type":"related"},{"name":"guanidinoacetate amidinohydrolase activity","type":"related"}],"termid":"GO:0047970"}


id: GO:0034316
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86988],"is_not":false,"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["PMID:16959963","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"negative regulation of actin nucleation","termid":"GO:0051126"},{"relation_name":"negatively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034316","terms_by_termid":{"GO:0034316":null}}


id: PBO:0041938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 6","termid":"PBO:0041938"}


id: GO:0034719
data:
  {"annotated_genes":["SJAG_01217","SJAG_03894","SJAG_01301","SJAG_00147","SJAG_01870","SJAG_03323","SJAG_05195"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91280,101942,106702],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[87750,97397,100630,92082,105063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of several methylated Sm proteins with the SMN complex; the latter contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and unrip proteins; additional proteins, including galectin-1 and galectin-3, are also found in the SMN-SM complex. The SMN-Sm complex is involved in spliceosomal snRNP assembly in the cytoplasm.","definition_xrefs":["PMID:17401408","GOC:vw","PMID:11522829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01870":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"SMN-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034719","terms_by_termid":{"GO:0032797":null,"GO:0034719":null}}


id: GO:0071495
data:
  {"annotated_genes":["SJAG_03048","SJAG_01805","SJAG_04332","SJAG_04140","SJAG_04183","SJAG_01837","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107277,98479,112752,89910,86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[98492,90651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to endogenous stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071495","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: PATO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased amount","secondary_identifiers":["PATO:0000419","PATO:0000468"],"synonyms":[{"name":"decreased","type":"related"},{"name":"decreased number","type":"exact"},{"name":"present in fewer numbers in organism","type":"exact"},{"name":"reduced","type":"related"},{"name":"subnumerary","type":"related"}],"termid":"PATO:0001997"}


id: PBO:0090741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protoporphyrinogen IX importer","termid":"PBO:0090741"}


id: PBO:0082295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginyl-tRNA-protein transferase; catalyzes post-translational conjugation of arginine to the amino termini of acceptor proteins which are then subject to degradation via the N-end rule pathway; may have a role in regulating stress response","termid":"PBO:0082295"}


id: GO:1901387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of voltage-gated calcium channel activity","termid":"GO:1901385"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of voltage-gated calcium channel activity","synonyms":[{"name":"activation of depolarization-activated calcium channel","type":"broad"},{"name":"activation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"activation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"activation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"activation of voltage gated calcium channel activity","type":"exact"},{"name":"activation of voltage-dependent calcium channel activity","type":"exact"},{"name":"activation of voltage-gated calcium channel activity","type":"narrow"},{"name":"activation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"activation of voltage-sensitive calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated calcium channel","type":"broad"},{"name":"positive regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"positive regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"positive regulation of voltage gated calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated calcium channel","type":"broad"},{"name":"up-regulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"up-regulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"up-regulation of voltage gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated calcium channel","type":"broad"},{"name":"upregulation of depolarization-activated voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel","type":"exact"},{"name":"upregulation of depolarization-activated voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of dihydropyridine-sensitive calcium channel activity","type":"narrow"},{"name":"upregulation of voltage gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium channel activity","type":"exact"},{"name":"upregulation of voltage-gated calcium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive calcium channel","type":"exact"}],"termid":"GO:1901387"}


id: GO:1901123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bacitracin A.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacitracin A metabolic process","termid":"GO:1901122"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A catabolic process","synonyms":[{"name":"bacitracin A breakdown","type":"exact"},{"name":"bacitracin A catabolism","type":"exact"},{"name":"bacitracin A degradation","type":"exact"}],"termid":"GO:1901123"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: GO:0097644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)).","definition_xrefs":["PMID:18687416","PMID:10871296","PMID:12037140","GOC:bhm","InterPro:IPR021116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcitonin family binding","termid":"GO:0097644"}


id: PBO:0045882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 6","termid":"PBO:0045882"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4981","RHEA:11432"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PATO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an entity or set of entities in which size increases or decreases along the extent of the entity or set.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered size","synonyms":[{"name":"gradient of size","type":"exact"}],"termid":"PATO:0005015"}


id: PBO:0084757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix protein involved in Fe-S cluster biogenesis; facilitates [4Fe-2S] cluster inception into mitochondrial proteins such as lipoate synthase and succinate dehydrogenase; interacts and may function with Grx5p at an early step in Fe-S cluster biosynthesis; forms dimeric complexes with Grx5p and Nfu1p that alter the stability of shared Fe/S clusters; sequence similarity to human BOLA family member, BOLA1 and S. pombe uvi31, a putative DNA repair protein","termid":"PBO:0084757"}


id: PBO:0056653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 20","termid":"PBO:0056653"}


id: PBO:0066275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member J","termid":"PBO:0066275"}


id: PBO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 5","termid":"PBO:0017082"}


id: PBO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase (predicted)","termid":"PBO:0003001"}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: PBO:0055330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2758","termid":"PBO:0055330"}


id: PBO:0029787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_septated_cell_with_abnormal_morphology","termid":"PBO:0029787"}


id: GO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin 3,3'-bissulfate + 3'-phosphoadenosine 5'-phosphosulfate = quercetin 3,3',7-trissulfate + adenosine 3',5'-bisphosphate.","definition_xrefs":["EC:2.8.2.28","MetaCyc:2.8.2.28-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"quercetin-3,3'-bissulfate 7-sulfotransferase activity","secondary_identifiers":["RHEA:21860"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:quercetin-3,3'-bissulfate 7-sulfotransferase activity","type":"related"},{"name":"7-sulfotransferase activity","type":"related"},{"name":"PAPS:flavonol 3,3'/3,4'-disulfate 7-sulfotransferase activity","type":"related"},{"name":"flavonol 7-sulfotransferase activity","type":"related"},{"name":"quercetin-3,3'-bissulphate 7-sulphotransferase activity","type":"exact"}],"termid":"GO:0047367"}


id: GO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont carbohydrate (obsolete GO:0052406)","termid":"GO:0052406"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PBO:0082344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; exhibits basal levels of chromatin binding throughout the genome as well as interacts with sequence-specific factors to accurately position nucleosomes in chromatin; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide","termid":"PBO:0082344"}


id: PBO:0090396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-III adaptor Alx1","termid":"PBO:0090396"}


id: PBO:0058135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4435-1","termid":"PBO:0058135"}


id: PBO:0029738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_II_activity","termid":"PBO:0029738"}


id: PBO:0061696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 214","termid":"PBO:0061696"}


id: PBO:0073488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 1 pseudogene 1","termid":"PBO:0073488"}


id: PBO:0012299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LYAR homolog","termid":"PBO:0012299"}


id: PBO:0081252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 23","termid":"PBO:0081252"}


id: PBO:0068180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 487","termid":"PBO:0068180"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: PBO:0088117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase S; expression is induced under low-nitrogen conditions","termid":"PBO:0088117"}


id: PBO:0045573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 23","termid":"PBO:0045573"}


id: GO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3.","definition_xrefs":["EC:3.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"beta-ureidopropionase activity","secondary_identifiers":["RHEA:11184","MetaCyc:BETA-UREIDOPROPIONASE-RXN","Reactome:R-HSA-73620","Reactome:R-HSA-73591"],"synonyms":[{"name":"N-carbamoyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0003837"}


id: MOD:00023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-phenylalanine.","definition_xrefs":["DeltaMass:0","RESID:AA0014","ChEBI:29997","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine residue","synonyms":[{"name":"(2S)-2-amino-3-phenylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-phenylpropanoic acid","type":"exact"},{"name":"L-phenylalanine","type":"exact"},{"name":"Phe","type":"exact"},{"name":"alpha-amino-beta-phenylpropionic acid","type":"exact"}],"termid":"MOD:00023"}


id: PBO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 1","termid":"PBO:0050958"}


