# terms

id: GO:0046530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell differentiation","secondary_identifiers":["GO:0007467"],"termid":"GO:0046530"}


id: PATO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"increased rate","termid":"PATO:0000912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency","synonyms":[{"name":"frequent","type":"related"},{"name":"high frequency","type":"exact"}],"termid":"PATO:0000380"}


id: PBO:0083065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine 1-phosphate phosphatase; membrane protein involved in sphingolipid metabolism; YSR3 has a paralog, LCB3, that arose from the whole genome duplication","termid":"PBO:0083065"}


id: PBO:0049980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIKESHI pseudogene 1","termid":"PBO:0049980"}


id: PBO:0048001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMD3 antisense RNA 1","termid":"PBO:0048001"}


id: GO:1903870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["PMID:24769206","GOC:TermGenie","GO_REF:0000059","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:1903868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","synonyms":[{"name":"activation of 5,10-CH(2)-H(4)folate reductase activity","type":"narrow"},{"name":"activation of 5,10-CH2-H4folate reductase activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"narrow"},{"name":"activation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"narrow"},{"name":"activation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"narrow"},{"name":"activation of MetF","type":"related"},{"name":"activation of N5,10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of N5,N10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"activation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase (NADPH2)","type":"narrow"},{"name":"activation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"positive regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"positive regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"positive regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"positive regulation of MetF","type":"related"},{"name":"positive regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"positive regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up regulation of MetF","type":"related"},{"name":"up regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"up-regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"up-regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"up-regulation of MetF","type":"related"},{"name":"up-regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"up-regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"upregulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"upregulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"upregulation of MetF","type":"related"},{"name":"upregulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"upregulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"upregulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"}],"termid":"GO:1903870"}


id: FYPO:0002043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal premeiotic DNA replication","synonyms":[{"name":"abnormal premeiotic DNA synthesis","type":"related"},{"name":"normal meiotic DNA replication","type":"related"},{"name":"normal meiotic DNA synthesis","type":"related"}],"termid":"FYPO:0002043"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: PBO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 13","termid":"PBO:0080027"}


id: GO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + X-phosphate = XH + phenylphosphate.","definition_xrefs":["UM-BBD_reactionID:r0155","PMID:16980461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenol kinase activity","secondary_identifiers":["MetaCyc:PHENOLPHOS-RXN"],"termid":"GO:0018720"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: PBO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 2","termid":"PBO:0001401"}


id: PBO:0003544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Dot2","termid":"PBO:0003544"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003674","GO:0016301","GO:0016740","GO:0003824","GO:0038023"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: GO:0000297
data:
  {"annotated_genes":["SJAG_02059","SJAG_02060","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105522,105528,105534,106427,107011,113408],"is_not":false,"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of spermine from one side of a membrane to the other. Spermine is a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"spermine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000297","terms_by_termid":{"GO:0000297":null}}


id: GO:0097608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motile cilium found in dinoflagellates. It coils around the cell and provides the forward thrust for motility. It is often contained in a furrow called the cingulum, and emerges from a flagellar pore located in the cingulum.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"transverse flagellum","synonyms":[{"name":"transverse cilium","type":"exact"}],"termid":"GO:0097608"}


id: PBO:0004448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm5 (predicted)","termid":"PBO:0004448"}


id: GO:0007218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a neuropeptide binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuropeptide signaling pathway","synonyms":[{"name":"neuropeptide signalling pathway","type":"exact"}],"termid":"GO:0007218"}


id: PBO:0066429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like estrogen regulated growth inhibitor","termid":"PBO:0066429"}


id: PBO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 4","termid":"PBO:0070734"}


id: GO:0051743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: red chlorophyll catabolite + reduced ferredoxin + 2 H+ = primary fluorescent catabolite + oxidized ferredoxin. This reaction is the reduction of the C20/C1 double bond in the pyrrole system of red chlorophyll catabolite (RCC) to a colorless tetrapyrrole (pFCC) with a strong blue fluorescence.","definition_xrefs":["PMID:10743659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","termid":"GO:0016636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"red chlorophyll catabolite reductase activity","secondary_identifiers":["RHEA:24752","MetaCyc:RXN-7741"],"synonyms":[{"name":"RCC reductase activity","type":"exact"}],"termid":"GO:0051743"}


id: GO:0009151
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a purine base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009151","terms_by_termid":{"GO:0035863":null}}


id: PBO:0060041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 29","termid":"PBO:0060041"}


id: PBO:0070204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 129 pseudogene","termid":"PBO:0070204"}


id: PBO:0063682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 6","termid":"PBO:0063682"}


id: PBO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C ortholog Cnp3","termid":"PBO:0018086"}


id: PBO:0062262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 18","termid":"PBO:0062262"}


id: PBO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds AP-1 site 5'-TGACTCA-3'","termid":"PBO:0007024"}


id: PBO:0061332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member B10, pseudogene","termid":"PBO:0061332"}


id: MOD:01799
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated serine, such as N-methylserine, N,N-dimethylserine, or N,N,N-trimethylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated serine","synonyms":[{"name":"MeSer","type":"exact"}],"termid":"MOD:01799"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: PBO:0065704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUS1 antisense RNA 1","termid":"PBO:0065704"}


id: PBO:0070929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 37","termid":"PBO:0070929"}


id: PBO:0052298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KHDRBS2 3'UTR overlapping transcript 1","termid":"PBO:0052298"}


id: GO:0032254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a secretory granule to a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"},{"relation_name":"part_of","term_name":"secretory granule localization","termid":"GO:0032252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of secretory granule localization","synonyms":[{"name":"establishment of secretory granule localisation","type":"exact"}],"termid":"GO:0032254"}


id: PBO:0038624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic chromatin condensation inducer 1","termid":"PBO:0038624"}


id: GO:0021909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GOC:cls","PMID:11262869","GO_REF:0000021","GOC:dgh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord anterior-posterior patterning (obsolete GO:0021909)","termid":"GO:0021909"}


id: PBO:0039683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family B member 1","termid":"PBO:0039683"}


id: FYPO:0005211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during anaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005211"}


id: FYPO:0005181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein degradation during cellular response to UV","synonyms":[{"name":"normal protein breakdown during cellular response to UV","type":"exact"},{"name":"normal protein catabolic process during cellular response to UV","type":"exact"},{"name":"normal protein catabolism during cellular response to UV","type":"exact"},{"name":"normal protein degradation during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal protein degradation during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005181"}


id: PBO:0081400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 248","termid":"PBO:0081400"}


id: GO:0110140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum attachment zone. FAZ is a network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["GOC:ach","PMID:26776656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellum attachment zone organization","synonyms":[{"name":"FAZ organization","type":"exact"},{"name":"flagellum attachment zone organisation","type":"exact"}],"termid":"GO:0110140"}


id: GO:0000177
data:
  {"annotated_genes":["SJAG_04084","SJAG_04006","SJAG_01818","SJAG_02991","SJAG_04321","SJAG_04153","SJAG_03179","SJAG_01521","SJAG_00854","SJAG_04824","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89161,92009,93344,98166,100481,101326,102526,103524,111943,114332],"is_not":false,"summary":null,"term":"GO:0000177"},{"annotations":[95047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"}]},"cv_name":"cellular_component","definition":"A ribonuclease complex that has 3-prime to 5-prime processive hydrolytic exoribonuclease activity producing 5-prime-phosphomonoesters. Participates in a multitude of cellular RNA processing and degradation events preventing nuclear export and/or translation of aberrant RNAs. Restricted to processing linear and circular single-stranded RNAs (ssRNA) only. RNAs with complex secondary structures may have to be unwound or pre-processed by co-factors prior to entering the complex, esp if the 3-prime end is structured.","definition_xrefs":["PMID:17174896","PMID:26726035","PMID:20531386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exosome (RNase complex)","termid":"GO:0000178"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic exosome (RNase complex)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic exosome (ribonuclease complex)","type":"exact"},{"name":"cytoplasmic exosome multienzyme ribonuclease complex","type":"exact"},{"name":"prokaryotic exosome multienzyme ribonuclease complex","type":"exact"}],"termid":"GO:0000177","terms_by_termid":{"GO:0000177":null,"GO:0045025":null}}


id: PBO:0083867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein and component of SCF ubiquitin ligase complexes; involved in ubiquitin-dependent protein catabolism; readily monoubiquitinated in vitro by SCF-Ubc4 complexes; SCF-Ucc1 regulates level of Cit2 citrate synthase protein to maintain citrate homeostasis, acts as metabolic switch for glyoxylate cycle; UCC1 transcription is downregulated in cells grown on C2-compounds","termid":"PBO:0083867"}


id: GO:0003431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a growth plate cartilage chondrocyte over time from after its fate commitment to the mature cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte development involved in endochondral bone morphogenesis","termid":"GO:0003433"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte development","termid":"GO:0003431"}


id: GO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["PMID:12810699","GOC:jh","GOC:tb","PMID:15923184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"}


id: PBO:0088899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family","termid":"PBO:0088899"}


id: PBO:0091750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1960392_1960393insG","termid":"PBO:0091750"}


id: PR:Q9P791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ADP-sugar pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02666","PRO:DNx","PANTHER:PTHR11839:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Nudix hydrolase P35G2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.12","secondary_identifiers":["UniProtKB:Q9P791"],"synonyms":[{"name":"Spom972h-NUDT5","type":"exact"}],"termid":"PR:Q9P791"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: GO:0015966
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93109],"is_not":false,"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate biosynthetic process","termid":"GO:0015960"},{"relation_name":"is_a","term_name":"diadenosine tetraphosphate metabolic process","termid":"GO:0015965"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diadenosine tetraphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate formation","type":"exact"},{"name":"diadenosine tetraphosphate anabolism","type":"exact"},{"name":"diadenosine tetraphosphate biosynthesis","type":"exact"},{"name":"diadenosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015966","terms_by_termid":{"GO:0015966":null}}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0009250
data:
  {"annotated_genes":["SJAG_00963","SJAG_01288","SJAG_04236","SJAG_01453","SJAG_05285","SJAG_04771","SJAG_02446","SJAG_01028","SJAG_00610","SJAG_00424","SJAG_03123","SJAG_03587","SJAG_02916","SJAG_01209","SJAG_02278","SJAG_02590","SJAG_04462","SJAG_01376","SJAG_03057","SJAG_04668","SJAG_00771","SJAG_04483","SJAG_04509","SJAG_01835","SJAG_00218","SJAG_04073","SJAG_04184","SJAG_00876","SJAG_01290","SJAG_04666","SJAG_02222","SJAG_01787","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112621,86711,90321,98551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[110449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[85273,110450,105153,100268,113840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[84210,111885,87696,87686,102176,103859,105380,109241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98734,104690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[104978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[87044,77742],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88515],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83657,88519],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84037],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88504,101420,113954,86886,88521,98941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[88525,85565,98943,91043],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glucan anabolism","type":"exact"},{"name":"glucan biosynthesis","type":"exact"},{"name":"glucan formation","type":"exact"},{"name":"glucan synthesis","type":"exact"}],"termid":"GO:0009250","terms_by_termid":{"GO:0005978":null,"GO:0006078":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051274":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein Syp1 (predicted)","termid":"PBO:0004370"}


id: GO:0140746
data:
  {"annotated_genes":["SJAG_03745","SJAG_01717","SJAG_16455","SJAG_01176","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84517,86899,88352,95711,102341],"is_not":false,"summary":null,"term":"GO:0140746"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of small interfering RNA transcripts (siRNAs).","definition_xrefs":["PMID:25928405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_02383":null,"SJAG_03745":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"siRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140746","terms_by_termid":{"GO:0140746":null}}


id: PBO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin reductase","termid":"PBO:0047489"}


id: GO:0033497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate metabolic process","termid":"GO:0033496"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sinapate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5168"],"synonyms":[{"name":"sinapate anabolism","type":"exact"},{"name":"sinapate biosynthesis","type":"exact"},{"name":"sinapate formation","type":"exact"},{"name":"sinapate synthesis","type":"exact"}],"termid":"GO:0033497"}


id: GO:0051939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid import","synonyms":[{"name":"4-aminobutyrate import","type":"exact"},{"name":"GABA import","type":"exact"},{"name":"gamma-aminobutyrate import","type":"exact"},{"name":"gamma-aminobutyric acid uptake","type":"exact"}],"termid":"GO:0051939"}


id: PBO:0109841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily G member 1","termid":"PBO:0109841"}


id: GO:1990051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive enzyme protein kinase C.","definition_xrefs":["PMID:3156004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase C activity","synonyms":[{"name":"PKC activation","type":"exact"},{"name":"protein kinase C activation","type":"exact"}],"termid":"GO:1990051"}


id: PATO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a improper spatial positioning away from an additional entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"misaligned with","termid":"PATO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misaligned away from","termid":"PATO:0002174"}


id: GO:1900745
data:
  {"annotated_genes":["SJAG_03903","SJAG_03828","SJAG_00318","SJAG_02183","SJAG_01199","SJAG_02135","SJAG_02945","SJAG_06592","SJAG_01587","SJAG_06622","SJAG_06621","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91362,105017,105018,105019,105020,105021,105022,105023,107899,108557,113428,114321],"is_not":false,"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of p38MAPK cascade","termid":"GO:1900744"},{"relation_name":"positively_regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02945":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of p38 MAPK cascade","type":"exact"},{"name":"activation of p38 cascade","type":"exact"},{"name":"activation of p38MAPK cascade","type":"narrow"},{"name":"positive regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"positive regulation of p38 MAPK cascade","type":"exact"},{"name":"positive regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38 MAPK cascade","type":"exact"},{"name":"up regulation of p38 cascade","type":"exact"},{"name":"up regulation of p38MAPK cascade","type":"exact"},{"name":"up-regulation of p38 MAPK cascade","type":"exact"},{"name":"up-regulation of p38 cascade","type":"exact"},{"name":"up-regulation of p38MAPK cascade","type":"exact"},{"name":"upregulation of p38 MAPK cascade","type":"exact"},{"name":"upregulation of p38 cascade","type":"exact"},{"name":"upregulation of p38MAPK cascade","type":"exact"}],"termid":"GO:1900745","terms_by_termid":{"GO:1900745":null}}


id: PBO:0062816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 10","termid":"PBO:0062816"}


id: FYPO:0007631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 12 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007631"}


id: PBO:0066327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 1","termid":"PBO:0066327"}


id: GO:0003707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a steroid hormone and transmitting the signal within the cell to initiate a change in cell activity or function.","definition_xrefs":["PMID:14708019","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor activity","termid":"GO:0004879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110","GO:0038023","GO:0003700"],"is_obsolete":false,"name":"nuclear steroid receptor activity","synonyms":[{"name":"steroid hormone receptor activity","type":"broad"}],"termid":"GO:0003707"}


id: PBO:0031619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transposition","termid":"PBO:0031619"}


id: PBO:0034647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034647"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["UniProtKB:O94561","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: PBO:0053144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6F, pseudogene","termid":"PBO:0053144"}


id: PBO:0047584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 4","termid":"PBO:0047584"}


id: PBO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 3","termid":"PBO:0043028"}


id: PR:O74741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YgiD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-DOPA dioxygenase extradiol-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.16c","secondary_identifiers":["UniProtKB:O74741"],"synonyms":[{"name":"Spom972h-ygiD","type":"exact"}],"termid":"PR:O74741"}


id: MOD:01850
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-D-cysteine.","definition_xrefs":["RESID:AA0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-D-cysteine","synonyms":[{"name":"(2S)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(S,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-D-cysteine","type":"exact"}],"termid":"MOD:01850"}


id: GO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a fibroblast growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016301","GO:0003824","GO:0016740","GO:0004672","GO:0038023"],"is_obsolete":false,"name":"fibroblast growth factor receptor activity","synonyms":[{"name":"FGF receptor activity","type":"exact"},{"name":"FGF-activated receptor activity","type":"exact"},{"name":"FGFR","type":"exact"},{"name":"fibroblast growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005007"}


id: PBO:0048652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD2 divergent transcript","termid":"PBO:0048652"}


id: PBO:0083169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A","termid":"PBO:0083169"}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01857","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: GO:1905168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair via homologous recombination.","definition_xrefs":["PMID:12023299","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair via homologous recombination","termid":"GO:0010569"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of double-strand break repair","termid":"GO:2000781"},{"relation_name":"positively_regulates","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of double-strand break repair via homologous recombination","synonyms":[{"name":"activation of HDR","type":"narrow"},{"name":"activation of HRR","type":"narrow"},{"name":"activation of Rad51-dependent recombinational repair","type":"narrow"},{"name":"activation of Rhp51-dependent recombinational repair","type":"narrow"},{"name":"activation of double-strand break repair via homologous recombination","type":"narrow"},{"name":"activation of homologous recombinational repair","type":"narrow"},{"name":"activation of homology-directed repair","type":"narrow"},{"name":"positive regulation of HDR","type":"exact"},{"name":"positive regulation of HRR","type":"exact"},{"name":"positive regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"positive regulation of homologous recombinational repair","type":"exact"},{"name":"positive regulation of homology-directed repair","type":"exact"},{"name":"up regulation of HDR","type":"exact"},{"name":"up regulation of HRR","type":"exact"},{"name":"up regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up regulation of homologous recombinational repair","type":"exact"},{"name":"up regulation of homology-directed repair","type":"exact"},{"name":"up-regulation of HDR","type":"exact"},{"name":"up-regulation of HRR","type":"exact"},{"name":"up-regulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"up-regulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"up-regulation of homologous recombinational repair","type":"exact"},{"name":"up-regulation of homology-directed repair","type":"exact"},{"name":"upregulation of HDR","type":"exact"},{"name":"upregulation of HRR","type":"exact"},{"name":"upregulation of Rad51-dependent recombinational repair","type":"exact"},{"name":"upregulation of Rhp51-dependent recombinational repair","type":"exact"},{"name":"upregulation of double-strand break repair via homologous recombination","type":"exact"},{"name":"upregulation of homologous recombinational repair","type":"exact"},{"name":"upregulation of homology-directed repair","type":"exact"}],"termid":"GO:1905168"}


id: PBO:0069169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 421, pseudogene","termid":"PBO:0069169"}


id: PBO:0084198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone methyltransferase, subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3K4; Set1p-dependent H3K4 trimethylation recruits Nrd1p, allowing efficient termination of snoRNAs and cryptic unstable transcripts (CUTs) by Nrd1p-Nab3p-Sen1p pathway; modulates histone acetylation levels in promoter proximal regions to ensure efficient Nrd1p-dependent termination; required in transcriptional silencing near telomeres and at silent mating type loci; has a SET domain","termid":"PBO:0084198"}


id: FYPO:0004173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to heat","synonyms":[{"name":"decreased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to heat stress","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0004173"}


id: GO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a stretch signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by stretch effect (obsolete GO:0023054)","synonyms":[{"name":"signal initiation by stretch effect","type":"exact"}],"termid":"GO:0023054"}


id: GO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.","definition_xrefs":["GOC:add","ISBN:1405196831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response involving T cells and B lineage cells","termid":"GO:0090719"}


id: GO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dihydroxylation of peptidyl-arginine to form peptidyl-3,4-dihydroxy-L-arginine.","definition_xrefs":["RESID:AA0369","PMID:10978343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine hydroxylation","termid":"GO:0030961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine dihydroxylation to peptidyl-3,4-dihydroxy-L-arginine","termid":"GO:0030962"}


id: PBO:0057058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR142 host genes","termid":"PBO:0057058"}


id: PBO:0089038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P1","termid":"PBO:0089038"}


id: FYPO:0000482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"},{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination","synonyms":[{"name":"decreased mitotic recombination during mitotic cell cycle","type":"related"},{"name":"decreased mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: decreased","type":"related"},{"name":"reduced mitotic recombination","type":"exact"}],"termid":"FYPO:0000482"}


id: PR:O74746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J domain-containing protein spf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.05c","secondary_identifiers":["UniProtKB:O74746"],"synonyms":[{"name":"Spom972h-DNAJC8","type":"exact"}],"termid":"PR:O74746"}


id: PBO:0060036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 24","termid":"PBO:0060036"}


id: PBO:0075632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2B","termid":"PBO:0075632"}


id: GO:0051921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 L-glutamine + adenosylcob(III)yrinate a,c-diamide + 4 ATP + 4 H2O = 4 L-glutamate + adenosylcobyrate + 4 ADP + 8 H+ + 4 phosphate.","definition_xrefs":["EC:6.3.5.10","RHEA:23256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenosylcobyric acid synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["MetaCyc:R345-RXN","KEGG_REACTION:R05225"],"synonyms":[{"name":"5'-deoxy-5'-adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase activity","type":"exact"},{"name":"Ado-cobyric acid synthase [glutamine hydrolyzing] activity","type":"exact"},{"name":"CobQ activity","type":"broad"},{"name":"adenosylcobyric acid synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"adenosylcobyrinic-acid-a,c-diamide:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"cobyric acid synthase activity","type":"related"}],"termid":"GO:0051921"}


id: GO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"bicarbonate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-2752067","RHEA:28695"],"synonyms":[{"name":"hydrogencarbonate transmembrane transporter activity","type":"exact"}],"termid":"GO:0015106"}


id: PBO:0045491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 9","termid":"PBO:0045491"}


id: GO:1901714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urea catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide catabolic process","termid":"GO:0034253"},{"relation_name":"is_a","term_name":"regulation of urea catabolic process","termid":"GO:0034254"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen cycle metabolic process","termid":"GO:1903316"},{"relation_name":"positively_regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071941","GO:0044281"],"is_obsolete":false,"name":"positive regulation of urea catabolic process","synonyms":[{"name":"activation of urea breakdown","type":"exact"},{"name":"activation of urea catabolic process","type":"narrow"},{"name":"activation of urea catabolism","type":"exact"},{"name":"activation of urea decomposition","type":"exact"},{"name":"activation of urea degradation","type":"exact"},{"name":"positive regulation of urea breakdown","type":"exact"},{"name":"positive regulation of urea catabolism","type":"exact"},{"name":"positive regulation of urea decomposition","type":"exact"},{"name":"positive regulation of urea degradation","type":"exact"},{"name":"up regulation of urea breakdown","type":"exact"},{"name":"up regulation of urea catabolic process","type":"exact"},{"name":"up regulation of urea catabolism","type":"exact"},{"name":"up regulation of urea decomposition","type":"exact"},{"name":"up regulation of urea degradation","type":"exact"},{"name":"up-regulation of urea breakdown","type":"exact"},{"name":"up-regulation of urea catabolic process","type":"exact"},{"name":"up-regulation of urea catabolism","type":"exact"},{"name":"up-regulation of urea decomposition","type":"exact"},{"name":"up-regulation of urea degradation","type":"exact"},{"name":"upregulation of urea breakdown","type":"exact"},{"name":"upregulation of urea catabolic process","type":"exact"},{"name":"upregulation of urea catabolism","type":"exact"},{"name":"upregulation of urea decomposition","type":"exact"},{"name":"upregulation of urea degradation","type":"exact"}],"termid":"GO:1901714"}


id: GO:0010002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardioblast differentiation","synonyms":[{"name":"cardiac precursor cell differentiation","type":"exact"},{"name":"cardioblast cell differentiation","type":"exact"},{"name":"cardiomyocyte generation","type":"related"}],"termid":"GO:0010002"}


id: PBO:0068835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 73, pseudogene","termid":"PBO:0068835"}


id: PBO:0043860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRADD pseudogene 1","termid":"PBO:0043860"}


id: PBO:0085828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; GFP-fusion protein localizes to the mitochondria; null mutant is viable and displays reduced frequency of mitochondrial genome loss","termid":"PBO:0085828"}


id: GO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear inner membrane (obsolete GO:0005639)","synonyms":[{"name":"integral to nuclear inner membrane","type":"narrow"}],"termid":"GO:0005639"}


id: PBO:0029043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029043"}


id: PBO:0026776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spatio-temporal_regulation_of_replication_fork_localization","termid":"PBO:0026776"}


id: PBO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 19","termid":"PBO:0044336"}


id: PBO:0073788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 8","termid":"PBO:0073788"}


id: PBO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A4","termid":"PBO:0039712"}


id: PBO:0063641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A4","termid":"PBO:0063641"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: GO:0008014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A calcium-dependent cell adhesion protein (type I membrane protein) that interacts in a homophilic manner in cell-cell interactions.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cell adhesion molecule activity (obsolete GO:0008014)","synonyms":[{"name":"cadherin","type":"narrow"},{"name":"calcium-dependent cell adhesion molecule activity","type":"exact"}],"termid":"GO:0008014"}


id: PBO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1","termid":"PBO:0047484"}


id: PATO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A flexibility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"flexible","termid":"PATO:0001544"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased flexibility","synonyms":[{"name":"low flexibility","type":"exact"}],"termid":"PATO:0001777"}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: GO:0039675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus through the nuclear pore.","definition_xrefs":["VZ:1953","PMID:12921991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus through nuclear pore","synonyms":[{"name":"exit of virus from host cell nucleus through nuclear pore complex","type":"exact"},{"name":"nuclear pore exit of virus","type":"exact"},{"name":"viral enome export through nuclear pore","type":"exact"}],"termid":"GO:0039675"}


id: PBO:0031307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-large_vacuoles_during_vegetative_growth","termid":"PBO:0031307"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: PBO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.2","termid":"PBO:0000837"}


id: FYPO:0009112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which flocculation does not occur in conditions where wild-type cells floculate. Flocculation is the non-sexual aggregation of cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}


id: PBO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.45","termid":"PBO:0002197"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:1672265","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: FYPO:0008048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation at centromere during meiosis","termid":"FYPO:0008048"}


id: FYPO:0006453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a histone acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal histone acetyltransferase activity","synonyms":[{"name":"abnormal histone acetylase activity","type":"exact"}],"termid":"FYPO:0006453"}


id: PBO:0077399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 132E","termid":"PBO:0077399"}


id: PATO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's not being compact or dense in arrangement.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loose","termid":"PATO:0001802"}


id: PBO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel syndrome","termid":"PBO:0011102"}


id: PBO:0079278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TELO2 interacting protein 2","termid":"PBO:0079278"}


id: FYPO:0001579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing a tetrapeptide such as Leu-Ser-Lys-Leu as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on tetrapeptide nitrogen source","synonyms":[{"name":"normal cell population growth on tetrapeptide nitrogen source","type":"exact"},{"name":"normal tetrapeptide utilization","type":"related"},{"name":"normal vegetative cell population growth on tetrapeptide nitrogen source","type":"exact"}],"termid":"FYPO:0001579"}


id: PBO:0066902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 203","termid":"PBO:0066902"}


id: PATO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A height which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"height","termid":"PATO:0000119"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased height","synonyms":[{"name":"tall","type":"related"}],"termid":"PATO:0000570"}


id: GO:2000029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proanthocyanidin biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"proanthocyanidin biosynthetic process","termid":"GO:0010023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of proanthocyanidin biosynthetic process","synonyms":[{"name":"regulation of proanthocyanidin anabolism","type":"exact"},{"name":"regulation of proanthocyanidin biosynthesis","type":"exact"},{"name":"regulation of proanthocyanidin formation","type":"exact"},{"name":"regulation of proanthocyanidin synthesis","type":"exact"}],"termid":"GO:2000029"}


id: GO:0006811
data:
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id: PBO:0029083
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id: GO:0046398
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id: PBO:0026740
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id: PBO:0060010
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id: GO:0032168
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id: FYPO:0003410
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id: PBO:0042908
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id: GO:0001727
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id: PBO:0057995
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id: GO:0014818
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id: PBO:0000224
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id: GO:0004466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a long-chain (2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:17721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.8","MetaCyc:LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN"],"synonyms":[{"name":"long-chain acyl-coenzyme A dehydrogenase activity","type":"related"},{"name":"long-chain-acyl-CoA dehydrogenase activity","type":"exact"},{"name":"palmitoyl-CoA dehydrogenase activity","type":"narrow"},{"name":"palmitoyl-coenzyme A dehydrogenase activity","type":"narrow"}],"termid":"GO:0004466"}


id: PBO:0047044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 107 member A","termid":"PBO:0047044"}


id: GO:0051336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrolase activity","synonyms":[{"name":"hydrolase regulator","type":"exact"}],"termid":"GO:0051336"}


id: PBO:0046572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 14","termid":"PBO:0046572"}


id: PBO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 44","termid":"PBO:0052676"}


id: SO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding valyl tRNA (SO:000273).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine_tRNA_primary_transcript","synonyms":[{"name":"valine tRNA primary transcript","type":"exact"}],"termid":"SO:0000230"}


id: PBO:0065687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary tumor-transforming 3, pseudogene","termid":"PBO:0065687"}


id: PBO:0044786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"differentially expressed in FDCP 8 homolog","termid":"PBO:0044786"}


id: PBO:0077934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 7","termid":"PBO:0077934"}


id: PBO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086072"}


id: SO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that is found in eukaryotic rDNA repeats, and is a site of replication fork pausing.","definition_xrefs":["PMID:17614787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_region_replication_fork_barrier","synonyms":[{"name":"mating type region replication fork barrier","type":"exact"}],"termid":"SO:0002021"}


id: FYPO:0000099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: PBO:0055220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2646","termid":"PBO:0055220"}


id: GO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + pentanamide = NH4 + valerate.","definition_xrefs":["EC:3.5.1.50","RHEA:10000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pentanamidase activity","secondary_identifiers":["MetaCyc:PENTANAMIDASE-RXN","KEGG_REACTION:R02938"],"synonyms":[{"name":"pentanamide amidohydrolase activity","type":"related"},{"name":"valeramidase activity","type":"related"}],"termid":"GO:0050168"}


id: PBO:0004270
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.99.1.2","termid":"PBO:0004270"}


id: PBO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_form_id","termid":"PBO:0006268"}


id: PBO:0060860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA-related kinase 4 pseudogene 2","termid":"PBO:0060860"}


id: GO:0050271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an S-alkyl-L-cysteine + H2O = an alkyl thiol + NH3 + pyruvate.","definition_xrefs":["RHEA:22424","MetaCyc:S-ALKYLCYSTEINE-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete S-alkylcysteine lyase activity (obsolete GO:0050271)","termid":"GO:0050271"}


id: GO:0015816
data:
  {"annotated_genes":["SJAG_00626","SJAG_04984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94324,96335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The directed movement of glycine, aminoethanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015816","terms_by_termid":{"GO:1904983":null}}


id: GO:0052545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["PMID:18397379","GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"callose localization","synonyms":[{"name":"callose localisation","type":"exact"}],"termid":"GO:0052545"}


id: PBO:0041371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 3","termid":"PBO:0041371"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: PBO:0062839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 5","termid":"PBO:0062839"}


id: GO:1990693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi cis cisterna membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of Golgi cis cisterna membrane (obsolete GO:1990693)","synonyms":[{"name":"intrinsic component of cis-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990693"}


id: FYPO:0003128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, is elongated, and progression through the mitotic cell cycle is arrested in M phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate aseptate cell","termid":"FYPO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000005","FYPO:0000032","FYPO:0000004","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in M phase during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in M","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitosis","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic M phase arrest","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in M phase","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase","type":"exact"},{"name":"mitotic M-phase arrested elongated inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase with elongated inviable mononucleate aseptate cell","type":"exact"},{"name":"nuclear division arrest without septation (elongated cell)","type":"exact"}],"termid":"FYPO:0003128"}


id: PBO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 27","termid":"PBO:0060007"}


id: PR:G2TRT5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.18 gene.","definition_xrefs":["UniProtKB:G2TRT5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCOCO-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.18","synonyms":[{"name":"Spom972h-SPCC663.18","type":"exact"}],"termid":"PR:G2TRT5"}


id: PBO:0082408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-tubulin; associates with alpha-tubulin (Tub1p and Tub3p) to form tubulin dimer, which polymerizes to form microtubules; mutation in human ortholog is associated with congenital fibrosis of the extraocular muscles (CFEOM) with polymicrogyria","termid":"PBO:0082408"}


id: PBO:0028365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_in_stationary_phase","termid":"PBO:0028365"}


id: FYPO:0004221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 dimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me2 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004221"}


id: FYPO:0005621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains more adducts formed between a topoisomerase and DNA than normal.","definition_xrefs":["PomBase:mah","PMID:22730331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased topoisomerase-DNA adduct level","synonyms":[{"name":"increased Top1-DNA adduct level","type":"narrow"},{"name":"increased Top1cc level","type":"narrow"},{"name":"increased topoisomerase I-DNA adduct level","type":"narrow"},{"name":"increased topoisomerase-DNA adduct level during mitotic cell cycle","type":"related"},{"name":"increased topoisomerase-DNA adduct level during vegetative growth","type":"exact"}],"termid":"FYPO:0005621"}


id: FYPO:0003388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of biotin into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biotin import","termid":"FYPO:0001744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased biotin import","synonyms":[{"name":"decreased biotin import across plasma membrane","type":"exact"},{"name":"decreased biotin import during mitotic cell cycle","type":"related"},{"name":"decreased biotin import during vegetative growth","type":"exact"},{"name":"decreased biotin import into cell","type":"exact"},{"name":"decreased biotin uptake","type":"exact"},{"name":"reduced biotin import","type":"exact"}],"termid":"FYPO:0003388"}


id: FYPO:0000952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuoles present in increased numbers","termid":"FYPO:0002790"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"additional vacuoles present during vegetative growth","type":"exact"},{"name":"extra vacuoles during vegetative growth","type":"exact"},{"name":"vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"vacuoles present in increased numbers during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000952"}


id: PBO:0055310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2737","termid":"PBO:0055310"}


id: PBO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 3","termid":"PBO:0060015"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: PR:O94404
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NIF3-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13799:SF13","PRO:DNx","OMA:SCHPO04957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NIF3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.12","secondary_identifiers":["UniProtKB:O94404"],"synonyms":[{"name":"Spom972h-NIF3L1","type":"exact"}],"termid":"PR:O94404"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: PBO:0064019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 53","termid":"PBO:0064019"}


id: SO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 21S_rRNA, which functions as a component of the large subunit of the ribosome in mitochondria.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002241 rRNA_21S_gene (obsolete SO:0002241)","synonyms":[{"name":"21S rRNA gene","type":"exact"},{"name":"21S_rRNA_gene","type":"exact"}],"termid":"SO:0002241"}


id: PBO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 34","termid":"PBO:0071311"}


id: PBO:0080934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated protein 1","termid":"PBO:0080934"}


id: PBO:0029421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029421"}


id: PBO:0065779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 2","termid":"PBO:0065779"}


id: PBO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10a","termid":"PBO:0004334"}


id: PBO:0028116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tributyltin","termid":"PBO:0028116"}


id: GO:0004132
data:
  {"annotated_genes":["SJAG_03771"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104458],"is_not":false,"summary":null,"term":"GO:0004132"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dCMP + H2O = dUMP + NH3.","definition_xrefs":["EC:3.5.4.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dCMP deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:DCMP-DEAMINASE-RXN","Reactome:R-HSA-73596","RHEA:22924"],"synonyms":[{"name":"dCMP aminohydrolase activity","type":"related"},{"name":"deoxy-CMP-deaminase activity","type":"related"},{"name":"deoxycytidine monophosphate deaminase activity","type":"related"},{"name":"deoxycytidine-5'-monophosphate aminohydrolase activity","type":"related"},{"name":"deoxycytidine-5'-phosphate deaminase activity","type":"related"},{"name":"deoxycytidylate aminohydrolase activity","type":"related"},{"name":"deoxycytidylate deaminase activity","type":"related"}],"termid":"GO:0004132","terms_by_termid":{"GO:0004132":null}}


id: PBO:0077452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 2","termid":"PBO:0077452"}


id: PATO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000005 absolute activity (obsolete PATO:0000005)","termid":"PATO:0000005"}


id: PBO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_organization","termid":"PBO:0031033"}


id: SO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the genome that has been predicted to be a gene but has not been confirmed by laboratory experiments.","direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted_gene","synonyms":[{"name":"predicted gene","type":"exact"}],"termid":"SO:0000996"}


id: PBO:0091183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf307","termid":"PBO:0091183"}


id: FYPO:0004495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003413"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"inviable swollen elongated multiseptate vegetative cell","termid":"FYPO:0006946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000004","FYPO:0000032","FYPO:0000005","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multiseptate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004495"}


id: GO:0009354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the transfer of succinyl-CoA to dihydrolipoamide to form S-succinyldihydrolipoamide. The enzyme is a component of the multienzyme 2-oxoglutarate dehydrogenase complex.","definition_xrefs":["EC:2.3.1.61"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide S-succinyltransferase complex (obsolete GO:0009354)","synonyms":[{"name":"dihydrolipoamide S-succinyltransferase complex","type":"exact"}],"termid":"GO:0009354"}


id: FYPO:0001911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein glycosylation during vegetative growth","synonyms":[{"name":"decreased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hypoglycosylation during vegetative growth","type":"exact"},{"name":"reduced protein glycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001911"}


id: PBO:0065245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 16","termid":"PBO:0065245"}


id: FYPO:0003274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing S-nitrosoglutathione (GSNO).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on GSNO","synonyms":[{"name":"normal cell population growth in presence of GSNO","type":"exact"},{"name":"normal cell population growth on GSNO","type":"exact"},{"name":"normal cell population growth on S-nitrosoglutathione","type":"exact"},{"name":"normal cellular response to GSNO","type":"related"},{"name":"normal vegetative cell population growth on GSNO","type":"exact"}],"termid":"FYPO:0003274"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_02594","SJAG_03706","SJAG_04061","SJAG_03916","SJAG_02621","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113960],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[84964,114122,84909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[87373,108283,114128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["GOC:mah","PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: FYPO:0005865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 in silent mating-type cassettes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"normal silent mating-type cassette histone H3-K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005865"}


id: PR:Q9USQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.13","synonyms":[{"name":"Spom972h-syj2","type":"exact"},{"name":"synaptojanin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ6"}


id: PBO:0063170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 antisense RNA 2","termid":"PBO:0063170"}


id: PBO:0081343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 143","termid":"PBO:0081343"}


id: GO:2000927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellodextrin catabolic process","synonyms":[{"name":"regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000927"}


id: GO:0047828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lyxose = D-xylulose.","definition_xrefs":["EC:5.3.1.15","RHEA:14201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-lyxose ketol-isomerase activity","secondary_identifiers":["MetaCyc:D-LYXOSE-KETOL-ISOMERASE-RXN","KEGG_REACTION:R01898"],"synonyms":[{"name":"D-lyxose aldose-ketose-isomerase activity","type":"related"},{"name":"D-lyxose isomerase activity","type":"related"}],"termid":"GO:0047828"}


id: PBO:0077880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl peptidase 2","termid":"PBO:0077880"}


id: GO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Peyer's patch is generated and organized. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"Peyer's patch development","termid":"GO:0048541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch morphogenesis","termid":"GO:0061146"}


id: FYPO:0000092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiodarone. Cells stop growing (and may die) at a concentration of amiodarone that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to amiodarone","synonyms":[{"name":"hypersensitive to amiodarone","type":"exact"},{"name":"sensitive to amiodarone during mitotic cell cycle","type":"related"},{"name":"sensitive to amiodarone during vegetative growth","type":"exact"}],"termid":"FYPO:0000092"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: PBO:0005347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cleavage site","termid":"PBO:0005347"}


id: PBO:0043188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2","termid":"PBO:0043188"}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: SO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 7SL RNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7SL_SINE_retrotransposon","synonyms":[{"name":"7SL SINE element","type":"exact"},{"name":"7SL SINE retrotransposon","type":"exact"},{"name":"RSL retrotransposon","type":"exact"}],"termid":"SO:0002275"}


id: GO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fuconate = 2-dehydro-3-deoxy-D-fuconate + H2O.","definition_xrefs":["EC:4.2.1.67","RHEA:12949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"D-fuconate dehydratase activity","secondary_identifiers":["MetaCyc:D-FUCONATE-HYDRATASE-RXN","KEGG_REACTION:R03671"],"synonyms":[{"name":"D-fuconate hydratase activity","type":"exact"},{"name":"D-fuconate hydro-lyase (2-dehydro-3-deoxy-D-fuconate-forming)","type":"related"},{"name":"D-fuconate hydro-lyase activity","type":"related"}],"termid":"GO:0047818"}


id: PBO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 pseudogene 1","termid":"PBO:0060837"}


id: PBO:0039892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor alpha","termid":"PBO:0039892"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0063314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated HIP1 interacting lncRNA","termid":"PBO:0063314"}


id: GO:0071518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxy-pentane-2,3-dione + ATP = 5-phospho-4-hydroxy-pentane-2,3-dione (P-DPD) + ADP.","definition_xrefs":["PMID:20025244","PMID:17274596","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"autoinducer-2 kinase activity","secondary_identifiers":["MetaCyc:RXN0-5461","RHEA:15377"],"synonyms":[{"name":"4,5-dihydroxy-pentane-2,3-dione kinase activity","type":"exact"}],"termid":"GO:0071518"}


id: PBO:0054019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1349","termid":"PBO:0054019"}


id: GO:1905536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eukaryotic translation initiation factor 4F complex assembly.","definition_xrefs":["GOC:bc","PMID:18426977","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of eukaryotic translation initiation factor 4F complex assembly","termid":"GO:1905535"},{"relation_name":"negatively_regulates","term_name":"eukaryotic translation initiation factor 4F complex assembly","termid":"GO:0097010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of eukaryotic translation initiation factor 4F complex assembly","synonyms":[{"name":"down regulation of eIF-4F assembly","type":"exact"},{"name":"down regulation of eIF4F assembly","type":"exact"},{"name":"down regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"down-regulation of eIF-4F assembly","type":"exact"},{"name":"down-regulation of eIF4F assembly","type":"exact"},{"name":"down-regulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"downregulation of eIF-4F assembly","type":"exact"},{"name":"downregulation of eIF4F assembly","type":"exact"},{"name":"downregulation of eukaryotic translation initiation factor 4F complex assembly","type":"exact"},{"name":"inhibition of eIF-4F assembly","type":"narrow"},{"name":"inhibition of eIF4F assembly","type":"narrow"},{"name":"inhibition of eukaryotic translation initiation factor 4F complex assembly","type":"narrow"},{"name":"negative regulation of eIF-4F assembly","type":"exact"},{"name":"negative regulation of eIF4F assembly","type":"exact"}],"termid":"GO:1905536"}


id: GO:0071826
data:
  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id: GO:1990303
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of UBR1 and RAD6 components. It polyubiquitinates proteins containing non-acetylated N-terminal residues causing their subsequent degradation by the proteasome as part of the Ac/N-End Rule pathway. It recognizes non-acetylated N-terminal methionine if it is followed by a hydrophobic residue. Additionally, it acts in an N-end rule independent manner as a component of a novel quality control pathway for proteins synthesized on cytosolic ribosomes.","definition_xrefs":["GOC:bhm","PMID:19531475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UBR1-RAD6 ubiquitin ligase complex","synonyms":[{"name":"UBR1-RAD6 complex","type":"exact"}],"termid":"GO:1990303"}


id: GO:0060594
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id: FYPO:0000760
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id: GO:0090147
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of mitochondria to the correct region of the cell that contributes to the process of mitochondrial fission.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of establishment of mitochondrion localization involved in mitochondrial fission (obsolete GO:0090147)","synonyms":[{"name":"regulation of establishment of mitochondrion localisation involved in mitochondrial fission","type":"exact"},{"name":"regulation of mitochondrial localization involved in mitochondrial fission","type":"related"}],"termid":"GO:0090147"}


id: GO:0086019
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the heart process that regulates cardiac muscle contraction; beginning with the generation of an action potential in the sinoatrial node and ending with regulation of contraction of the myocardium.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling involved in cardiac conduction","synonyms":[{"name":"cell-cell signalling involved in cardiac conduction","type":"exact"}],"termid":"GO:0086019"}


id: GO:0003321
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased by the chemicals epinephrine and norepinephrine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}


id: PR:Q9P7F2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cao1 gene.","definition_xrefs":["UniProtKB:Q9P7F2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.04","synonyms":[{"name":"Spom972h-cao1","type":"exact"}],"termid":"PR:Q9P7F2"}


id: GO:0102800
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanidin 3,5-di-O-beta-D-glucoside + caffeoyl-CoA = pelargonidin 3-O-(6-O-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"caffeoyl-CoA:pelargonidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8138"],"termid":"GO:0102800"}


id: PBO:0030050
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric-chelate_reductase_activity","termid":"PBO:0030050"}


id: GO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception","termid":"GO:0051931"}


id: PBO:0069141
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 392, pseudogene","termid":"PBO:0069141"}


id: PBO:0024822
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3 (predicted)","termid":"PBO:0024822"}


id: GO:0032011
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the ARF subfamily relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ARF protein signal transduction","termid":"GO:0032011"}


id: PR:Q9UTC9
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00201","PANTHER:PTHR13303:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.10","secondary_identifiers":["UniProtKB:Q9UTC9"],"synonyms":[{"name":"Spom972h-PFDN2","type":"exact"}],"termid":"PR:Q9UTC9"}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: GO:1903701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a substantia propria of cornea over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GO_REF:0000094","PMID:12556382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia propria of cornea development","synonyms":[{"name":"corneal stroma development","type":"exact"},{"name":"stroma of cornea development","type":"exact"},{"name":"substantia propria development","type":"related"}],"termid":"GO:1903701"}


id: GO:0102939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methoxy-5-hydroxytoluene + S-adenosyl-L-methionine = H+ + 3,5-dimethoxytoluene + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-methoxy-5-hydroxytoluene O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9018"],"termid":"GO:0102939"}


id: GO:0032865
data:
  {"annotated_genes":["SJAG_01305","SJAG_01116","SJAG_03416","SJAG_03710","SJAG_01929","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87012,101916,103101,103602,103730,112686],"is_not":false,"summary":null,"term":"GO:0032865"}]},"cv_name":"cellular_component","definition":"A protein complex that links the endoplasmic reticulum with mitochondria and may have a role in promoting exchange of calcium and phospholipids between the two organelles.","definition_xrefs":["GOC:mcc","PMID:29279306","PMID:19556461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"mitochondria-associated endoplasmic reticulum membrane contact site","termid":"GO:0044233"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"ERMES complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondria encounter structure","type":"exact"},{"name":"MMM1 complex","type":"exact"},{"name":"Mdm10/Mdm12/Mmm1 complex","type":"exact"},{"name":"mitochore","type":"exact"}],"termid":"GO:0032865","terms_by_termid":{"GO:0032865":null}}


id: PBO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA delta isomerase 1","termid":"PBO:0045765"}


id: GO:0030510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of BMP signaling pathway","secondary_identifiers":["GO:0090097"],"synonyms":[{"name":"regulation of BMP receptor signaling pathway","type":"related"},{"name":"regulation of BMP signalling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030510"}


id: GO:0061925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the frequency, rate or extent of the formation of radial glial scaffolds. The scaffolds are used as a substrate for the radial migration of cells.","definition_xrefs":["PMID:22076441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell morphogenesis","termid":"GO:0010771"},{"relation_name":"is_a","term_name":"regulation of formation of radial glial scaffolds","termid":"GO:0061924"},{"relation_name":"negatively_regulates","term_name":"formation of radial glial scaffolds","termid":"GO:0021943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of radial glial scaffolds","synonyms":[{"name":"negative regulation of Bergmann fiber biosynthesis","type":"related"},{"name":"negative regulation of Bergmann fiber formation","type":"related"},{"name":"negative regulation of radial glial scaffold formation","type":"exact"}],"termid":"GO:0061925"}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: GO:0014054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"activation of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"positive regulation of GABA secretion","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid secretion","type":"exact"}],"termid":"GO:0014054"}


id: GO:1905182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urease activity.","definition_xrefs":["GO_REF:0000059","PMID:16244137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of urease activity","termid":"GO:1905181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urease activity","synonyms":[{"name":"activation of urea amidohydrolase activity","type":"narrow"},{"name":"activation of urease activity","type":"narrow"},{"name":"positive regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urease activity","type":"exact"},{"name":"up-regulation of urea amidohydrolase activity","type":"exact"},{"name":"up-regulation of urease activity","type":"exact"},{"name":"upregulation of urea amidohydrolase activity","type":"exact"},{"name":"upregulation of urease activity","type":"exact"}],"termid":"GO:1905182"}


id: PBO:0075943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 2","termid":"PBO:0075943"}


id: GO:0030536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Feeding behavior in a larval (immature) organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval feeding behavior","synonyms":[{"name":"larval feeding behaviour","type":"exact"}],"termid":"GO:0030536"}


id: GO:2000064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of cortisol biosynthetic process","synonyms":[{"name":"regulation of cortisol anabolism","type":"related"},{"name":"regulation of cortisol biosynthesis","type":"exact"},{"name":"regulation of cortisol formation","type":"exact"},{"name":"regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000064"}


id: PBO:0058585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6718","termid":"PBO:0058585"}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: PBO:0068402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 220","termid":"PBO:0068402"}


id: GO:0032677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-8 production","secondary_identifiers":["GO:0045414","GO:2000482"],"synonyms":[{"name":"regulation of IL-8 production","type":"exact"},{"name":"regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-8 secretion","type":"narrow"}],"termid":"GO:0032677"}


id: PR:O74387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rav2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of V-ATPase in vacuolar membrane protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.12","synonyms":[{"name":"RAVE complex subunit rav2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rav2","type":"exact"}],"termid":"PR:O74387"}


id: PR:Q10146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease rrp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.01","synonyms":[{"name":"Spom972h-rrp6","type":"exact"},{"name":"ribosomal RNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10146"}


id: GO:0035687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a T-helper 1 cell from the blood vessels into the surrounding tissue. A T-helper 1 cell is a CD4-positive, alpha-beta T cell that has the phenotype T-bet-positive and produces interferon-gamma.","definition_xrefs":["CL:0000545","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helper T cell extravasation","termid":"GO:0035684"},{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell extravasation","synonyms":[{"name":"Th1 cell extravasation","type":"exact"}],"termid":"GO:0035687"}


id: PBO:0072789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 4, pseudogene","termid":"PBO:0072789"}


id: FYPO:0005593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inositol phosphorylceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular inositol phosphorylceramide level","synonyms":[{"name":"increased cellular IPC level","type":"exact"},{"name":"increased cellular inositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol phosphorylceramide level during vegetative growth","type":"exact"},{"name":"increased inositol phosphorylceramide accumulation","type":"related"}],"termid":"FYPO:0005593"}


id: PBO:0055291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2718","termid":"PBO:0055291"}


id: GO:0103032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-glycerate + NAD = H+ + 2-hydroxy-3-oxopropanoate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tartronate semialdehyde reductase activity (obsolete GO:0103032)","termid":"GO:0103032"}


id: GO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving oleic acid that activates or increases the rate of transcription.","definition_xrefs":["GOC:dph","PMID:20395639"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription by oleic acid (obsolete GO:0061421)","termid":"GO:0061421"}


id: GO:0005774
data:
  {"annotated_genes":["SJAG_00732","SJAG_00516","SJAG_04867","SJAG_03497","SJAG_02716","SJAG_03005","SJAG_01619","SJAG_00380","SJAG_01990","SJAG_03406","SJAG_02344","SJAG_00570","SJAG_02414","SJAG_03138","SJAG_04966","SJAG_01036","SJAG_03987","SJAG_02289","SJAG_01400","SJAG_02029","SJAG_01783","SJAG_03089","SJAG_01447","SJAG_03072","SJAG_01344","SJAG_01983","SJAG_01803","SJAG_00212","SJAG_03928","SJAG_00771","SJAG_03250","SJAG_03400","SJAG_04496","SJAG_04963","SJAG_04506","SJAG_01299","SJAG_02656","SJAG_00209","SJAG_04955","SJAG_02231","SJAG_01772","SJAG_02723","SJAG_04028","SJAG_05294","SJAG_02765","SJAG_04975","SJAG_03899","SJAG_01032","SJAG_04232","SJAG_03009","SJAG_02356","SJAG_03511","SJAG_00561","SJAG_03656","SJAG_03403","SJAG_00824","SJAG_00457","SJAG_00688","SJAG_01112","SJAG_03895","SJAG_03725","SJAG_02103","SJAG_03960","SJAG_04725","SJAG_02433","SJAG_02699","SJAG_03442","SJAG_02782","SJAG_01817","SJAG_03447","SJAG_01080","SJAG_01324","SJAG_00029","SJAG_04698","SJAG_01509","SJAG_02315","SJAG_02578","SJAG_01078","SJAG_00534","SJAG_02665","SJAG_01145","SJAG_03256","SJAG_01320","SJAG_00299","SJAG_01941","SJAG_04616","SJAG_07012","SJAG_02603","SJAG_03667","SJAG_03909","SJAG_01795","SJAG_01319","SJAG_01598","SJAG_01397","SJAG_01913","SJAG_03848","SJAG_05194","SJAG_00877","SJAG_05210","SJAG_00136","SJAG_04502","SJAG_02117","SJAG_04910","SJAG_03401","SJAG_03137","SJAG_01236","SJAG_02565","SJAG_03313","SJAG_03100","SJAG_03371","SJAG_01505","SJAG_03450","SJAG_00821","SJAG_02424","SJAG_04471","SJAG_02853","SJAG_02023","SJAG_00638","SJAG_04015","SJAG_01027","SJAG_02902","SJAG_01184","SJAG_01991","SJAG_03355","SJAG_04023","SJAG_00051","SJAG_06309","SJAG_05184","SJAG_00204","SJAG_04643","SJAG_01471","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84161,84453,85544,90277,92201,94111,94427,95664,97540,99101,101770,102722,103225,103477,105880,106339,107032],"is_not":false,"summary":null,"term":"GO:0005774"},{"annotations":[86198,109713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000421"},{"annotations":[103368,106424,99683,83871,113858,114403,96344,85216,108643,110408,85195,85437,92796,94957,98064,96030,90159,88152,94917,96374,100005,101783,103269,105336,105501,105946,94457,97721,94795,93722,89869,90418,90697,99929,89069,92129,94148,106332,106467,89995,86338,99532,99893,88215,109311,96321,109717,110577,89870,97537,112620,105363,90729,84157,112963,85275,90133,113437,112268,114240,110939,92713,93154,102747,105451,101044,100973,106098,113086,84175,113311,114765,94699,91998,110401,88988,85970,103928,87600,85262,91758,91870,93464,104756,106064,102754,109628,111621,112693,113595,92085,92238,86513,96106,89812,90698,101203,106337,107861,113656,92513,86279,98894,96068,89630,104356,109488,85229,94654,103475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000329"},{"annotations":[103369,83872,106065,109630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070772"},{"annotations":[101205,103929,88989,90160],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071986"},{"annotations":[96404,96345,85843,97213,100715,114471,90420,86298],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902500"},{"annotations":[85971,96031,100006,88153,86280,91759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[98761,114766,95009,96107,97730,92714,105948,84176],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of 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membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005774","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000329":null,"GO:0000421":null,"GO:0005774":null,"GO:0070772":null,"GO:0071986":null,"GO:1902500":null}}


id: PATO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation quality inhering in a bearer by virtue the bearer's being in a high position relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elevation relative to","termid":"PATO:0002515"}


id: PBO:0057959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3681","termid":"PBO:0057959"}


id: PBO:0081502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 404","termid":"PBO:0081502"}


id: PBO:0066759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 57","termid":"PBO:0066759"}


id: GO:0071653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"negatively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"negative regulation of CCL1 production","type":"exact"},{"name":"negative regulation of T cell activation 3 production","type":"exact"},{"name":"negative regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071653"}


id: PBO:0070198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 123 pseudogene","termid":"PBO:0070198"}


id: PBO:0071144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 7","termid":"PBO:0071144"}


id: PATO:0002235
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tapered shape quality inhering in a bearer by virtue of the bearer's being flat, slender, and tapering to a point.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blade-like","synonyms":[{"name":" sword-like","type":"exact"},{"name":"blade-shaped","type":"exact"},{"name":"ensiform ","type":"exact"},{"name":"sword-shaped","type":"exact"}],"termid":"PATO:0002235"}


id: GO:0022819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a potassium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"potassium ion uniporter activity","termid":"GO:0022819"}


id: PBO:0048561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-L-fucose synthase","termid":"PBO:0048561"}


id: GO:1905004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of picolinic acid.","definition_xrefs":["GOC:TermGenie","PMID:19843166","GO_REF:0000068","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"picolinic acid metabolic process","termid":"GO:1905003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"picolinic acid biosynthetic process","synonyms":[{"name":"picolinate biosynthesis","type":"exact"},{"name":"picolinate biosynthetic process","type":"exact"},{"name":"picolinic acid anabolism","type":"exact"},{"name":"picolinic acid biosynthesis","type":"exact"},{"name":"picolinic acid formation","type":"exact"},{"name":"picolinic acid synthesis","type":"exact"}],"termid":"GO:1905004"}


id: SO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where a translocation begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation_breakpoint","synonyms":[{"name":"translocation breakpoint","type":"exact"}],"termid":"SO:0001413"}


id: PBO:0048576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyl diphosphate synthase 1","termid":"PBO:0048576"}


id: GO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(R),10(R)-dihydrodiolphenanthrene is the principal intermediate metabolite.","definition_xrefs":["UM-BBD_pathwayID:pha3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene catabolic process","termid":"GO:0042216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene","synonyms":[{"name":"phenanthrene breakdown via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"},{"name":"phenanthrene degradation via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"}],"termid":"GO:0018956"}


id: FYPO:0008139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the endoplasmic reticulum lumen is larger than normal.","definition_xrefs":["PMID:11839792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"dilated endoplasmic reticulum lumen","synonyms":[{"name":"dialted ER lumen","type":"exact"}],"termid":"FYPO:0008139"}


id: GO:0009252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["ISBN:0198506732","PMID:18266853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"},{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan biosynthetic process","secondary_identifiers":["GO:0009285"],"synonyms":[{"name":"murein biosynthesis","type":"exact"},{"name":"murein biosynthetic process","type":"exact"},{"name":"peptidoglycan anabolism","type":"exact"},{"name":"peptidoglycan biosynthesis","type":"exact"},{"name":"peptidoglycan formation","type":"exact"},{"name":"peptidoglycan synthesis","type":"exact"}],"termid":"GO:0009252"}


id: PBO:0050162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 18","termid":"PBO:0050162"}


id: PR:P87054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 15 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.06","synonyms":[{"name":"Spom972h-mug15","type":"exact"}],"termid":"PR:P87054"}


id: GO:0046580
data:
  {"annotated_genes":["SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107439],"is_not":false,"summary":null,"term":"GO:0046580"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Ras protein signal transduction","termid":"GO:0046578"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Ras protein signal transduction","type":"exact"},{"name":"down-regulation of Ras protein signal transduction","type":"exact"},{"name":"downregulation of Ras protein signal transduction","type":"exact"},{"name":"inhibition of Ras protein signal transduction","type":"narrow"}],"termid":"GO:0046580","terms_by_termid":{"GO:0046580":null}}


id: PBO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA10 antisense RNA","termid":"PBO:0050482"}


id: GO:0005150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type I interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-1, type I receptor binding","synonyms":[{"name":"IL-1 type I","type":"narrow"},{"name":"interleukin-1, type I receptor ligand","type":"narrow"}],"termid":"GO:0005150"}


id: GO:1903435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:22899725","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"positively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of constitutive secretory pathway","synonyms":[{"name":"activation of constitutive secretory pathway","type":"narrow"},{"name":"up regulation of constitutive secretory pathway","type":"exact"},{"name":"up-regulation of constitutive secretory pathway","type":"exact"},{"name":"upregulation of constitutive secretory pathway","type":"exact"}],"termid":"GO:1903435"}


id: PR:Q10227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E12.03c gene.","definition_xrefs":["UniProtKB:Q10227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2E12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E12.03c","synonyms":[{"name":"Spom972h-SPAC2E12.03c","type":"exact"}],"termid":"PR:Q10227"}


id: GO:0008814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + citrate = acetate + (3S)-citryl-CoA.","definition_xrefs":["EC:2.8.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"citrate CoA-transferase activity","secondary_identifiers":["MetaCyc:CITTRANS-RXN","RHEA:19405"],"synonyms":[{"name":"acetyl-CoA:citrate CoA-transferase activity","type":"related"}],"termid":"GO:0008814"}


id: GO:0004726
data:
  {"annotated_genes":["SJAG_01667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83858],"is_not":false,"summary":null,"term":"GO:0004726"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: non-membrane spanning protein tyrosine phosphate + H2O = non-membrane spanning protein tyrosine + phosphate.","definition_xrefs":["PMID:34353440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016787","GO:0004721","GO:0016788"],"is_obsolete":false,"name":"non-membrane spanning protein tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-177924","Reactome:R-HSA-177935","Reactome:R-HSA-177923","Reactome:R-HSA-177926","Reactome:R-HSA-9635739"],"termid":"GO:0004726","terms_by_termid":{"GO:0004726":null}}


id: PBO:0091566
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Related Protein","termid":"PBO:0091566"}


id: PATO:0000504
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's lacking rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrhythmic","termid":"PATO:0000504"}


id: GO:0033582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in the cytosol.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in cytosol (obsolete GO:0033582)","synonyms":[{"name":"protein amino acid galactosylation in cytosol","type":"exact"}],"termid":"GO:0033582"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: GO:0019038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The name given to a viral genome after it has been integrated into the host genome; particularly applies to retroviruses and is a required part of the retroviral replication cycle.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete provirus (obsolete GO:0019038)","secondary_identifiers":["Wikipedia:Provirus"],"termid":"GO:0019038"}


id: GO:0019092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a srRNA, small subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial srRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial srRNA","type":"broad"},{"name":"mitochondrial srRNA export","type":"exact"},{"name":"mitochondrial srRNA export from mitochondria","type":"exact"},{"name":"mitochondrial srRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial srRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial srRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019092"}


id: PBO:0109913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 20","termid":"PBO:0109913"}


id: GO:0061984
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102325,71022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A process in which the presence of one nutrient source leads to a decrease in the frequency, rate, or extent of processes involved in the metabolism of other nutrient sources.","definition_xrefs":["GOC:dph","PMID:29197127","PMID:29295552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"negatively_regulates","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catabolite repression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061984","terms_by_termid":{"GO:0000433":null}}


id: PBO:0086366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,3-mannosyltransferase; not required for protein O-glycosylation; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086366"}


id: PBO:0056297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 beta","termid":"PBO:0056297"}


id: GO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of histamine with H2 type receptor receptors with subsequent activation of adenylate cyclase and elevation of intracellular cyclic AMP.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"histamine-induced gastric acid secretion","termid":"GO:0001697"}


id: PBO:0082964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; possibly involved in vacuolar protein degradation; not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase); null mutants exhibit normal growth; contains two PH-like domains","termid":"PBO:0082964"}


id: PBO:0027164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027164"}


id: PBO:0063912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha","termid":"PBO:0063912"}


id: PBO:0076811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEN1 subunit of CST complex","termid":"PBO:0076811"}


id: PBO:0090771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex beta subunit Apl2","termid":"PBO:0090771"}


id: GO:0097533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["PMID:10615049","PMID:19170886","Wikipedia:Acid","GOC:go_curators","GOC:BHF","GOC:aa","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress response to acid chemical","termid":"GO:0097532"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"part_of","term_name":"cellular response to acid chemical","termid":"GO:0071229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular stress response to acid chemical","synonyms":[{"name":"cellular response to acid stress","type":"broad"},{"name":"cellular stress response to acid","type":"broad"}],"termid":"GO:0097533"}


id: FYPO:0003306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is lower than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:11683392","PMID:22684255","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic index","synonyms":[{"name":"reduced mitotic index","type":"exact"}],"termid":"FYPO:0003306"}


id: PBO:0056878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial contact site and cristae organizing system subunit 10","termid":"PBO:0056878"}


id: PBO:0004550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Rsv2","termid":"PBO:0004550"}


id: PBO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-28","termid":"PBO:0051201"}


id: PBO:0030045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_iron_starvation","termid":"PBO:0030045"}


id: PBO:0055534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2970","termid":"PBO:0055534"}


id: PBO:0088852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase Lap2","termid":"PBO:0088852"}


id: GO:1902524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K48-linked ubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"},{"relation_name":"is_a","term_name":"positive regulation of protein polyubiquitination","termid":"GO:1902916"},{"relation_name":"positively_regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein K48-linked ubiquitination","synonyms":[{"name":"activation of protein K48-linked polyubiquitination","type":"narrow"},{"name":"activation of protein K48-linked ubiquitination","type":"narrow"},{"name":"positive regulation of protein K48-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K48-linked polyubiquitination","type":"exact"},{"name":"up regulation of protein K48-linked ubiquitination","type":"exact"},{"name":"up-regulation of protein K48-linked polyubiquitination","type":"exact"},{"name":"up-regulation of protein K48-linked ubiquitination","type":"exact"},{"name":"upregulation of protein K48-linked polyubiquitination","type":"exact"},{"name":"upregulation of protein K48-linked ubiquitination","type":"exact"}],"termid":"GO:1902524"}


id: GO:2001269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043280"},{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","termid":"GO:2001267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway","synonyms":[{"name":"positive regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001269"}


id: PBO:0080226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral integration site 1","termid":"PBO:0080226"}


id: GO:1903341
data:
  {"annotated_genes":["SJAG_03720","SJAG_00100","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104435,98475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[112308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic DNA double-strand break formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25103240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic DNA double-strand break formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903341","terms_by_termid":{"GO:0062209":null,"GO:1905263":null}}


id: PBO:0003469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase homolog Chs2","termid":"PBO:0003469"}


id: FYPO:0004097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring contraction","synonyms":[{"name":"normal actomyosin contractile ring constriction","type":"exact"},{"name":"normal actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal contractile ring contraction","type":"exact"},{"name":"normal cytokinetic contractile ring contraction","type":"exact"},{"name":"normal mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004097"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: PBO:0060781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 3","termid":"PBO:0060781"}


id: PBO:0078390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-5","termid":"PBO:0078390"}


id: GO:1903744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25329901","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle transport","termid":"GO:1902805"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"positively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"activation of anterograde synaptic vesicle transport","type":"narrow"},{"name":"up regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"up-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"upregulation of anterograde synaptic vesicle transport","type":"exact"}],"termid":"GO:1903744"}


id: GO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to testosterone","termid":"GO:0033574"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to testosterone stimulus","termid":"GO:0071394"}


id: GO:0002715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045845"],"synonyms":[{"name":"regulation of NK cell mediated immunity","type":"exact"},{"name":"regulation of natural killer cell activity","type":"related"}],"termid":"GO:0002715"}


id: SO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_primary_transcript","synonyms":[{"name":"rRNA primary transcript","type":"exact"},{"name":"ribosomal RNA primary transcript","type":"exact"}],"termid":"SO:0000209"}


id: GO:0003387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron that contributes to the progression of the amphid sensory gland.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}


id: PBO:0017740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog Tma19/Tpt1","termid":"PBO:0017740"}


id: PBO:0030418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_oxidative_stress","termid":"PBO:0030418"}


id: GO:0097598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small amount of cytoplasm surrounded by a cell membrane that is generally retained in spermatozoa after spermiogenesis, when the majority of the cytoplasm is phagocytosed by Sertoli cells to produce what are called residual bodies. Initially, the droplet is located at the neck just behind the head of an elongated spermatid. During epididymal transit, the cytoplasmic droplet migrates caudally to the annulus at the end of the midpiece; the exact position and time varies by species. The cytoplasmic droplet consists of lipids, lipoproteins, RNAs, a variety of hydrolytic enzymes, receptors, ion channels, and Golgi-derived vesicles. The droplet may be involved in regulatory volume loss (RVD) at ejaculation, and in most species, though not in humans, the cytoplasmic droplet is lost at ejaculation. Note that the cytoplasmic droplet is distinct from 'excessive residual cytoplasm' that sometimes remains in epididymal spermatozoa, particularly when spermiogenesis has been disrupted.","definition_xrefs":["PMID:21076437","PMID:23159014","GOC:vesicles","GOC:krc","PMID:12672117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"sperm cytoplasmic droplet","synonyms":[{"name":"sperm residual cytoplasm","type":"exact"}],"termid":"GO:0097598"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["PMID:22995177","GOC:TermGenie","GO_REF:0000059","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: GO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating epinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating adrenaline","type":"exact"}],"termid":"GO:0003111"}


id: PBO:0083742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; required for accurate chromosome segregation; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083742"}


id: PR:P40899
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp3 gene.","definition_xrefs":["UniProtKB:P40899","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process protein isp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.05","synonyms":[{"name":"Spom972h-isp3","type":"exact"},{"name":"meiotic expression up-regulated protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40899"}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_01087","SJAG_04847","SJAG_02510","SJAG_03043","SJAG_05248","SJAG_00315","SJAG_02535","SJAG_03197","SJAG_03297"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85156,93286,93287,108196,108197,108276,108277,108539,110550,110551,111419,111420,111780,112649,112650],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02510":null,"SJAG_02535":null,"SJAG_03043":null,"SJAG_03197":null,"SJAG_03297":null,"SJAG_04847":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: PBO:0084060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family members; involved in ER to Golgi trafficking; exhibits GAP activity toward Ypt1p that is stimulated by Gyl1p, also acts on Sec4p; interacts with Gyl1p, Rvs161p and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; GYP5 has a paralog, GYL1, that arose from the whole genome duplication","termid":"PBO:0084060"}


id: FYPO:0001152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during nitrogen starvation","synonyms":[{"name":"decreased RNA accumulation during nitrogen starvation","type":"related"},{"name":"decreased RNA level during nitrogen depletion","type":"exact"},{"name":"decreased RNA level during nitrogen deprivation","type":"exact"},{"name":"decreased transcript level during nitrogen starvation","type":"exact"},{"name":"reduced RNA level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001152"}


id: GO:0010612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"}


id: PBO:0113142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for yeast Rab family members; members include Ypt7p (most effective), Ypt1p, Ypt31p, and Ypt32p (in vitro); involved in vesicle mediated protein trafficking; regulates Ypt7p activity on late endosomes; contains a PH-like domain","termid":"PBO:0113142"}


id: PBO:0028550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization","termid":"PBO:0028550"}


id: PBO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 1","termid":"PBO:0043318"}


id: GO:0008165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrethroid resistance (obsolete GO:0008165)","synonyms":[{"name":"pyrethroid resistance","type":"exact"}],"termid":"GO:0008165"}


id: FYPO:0006538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid during a cellular response to a pheromone. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"spheroid cell during cellular response to pheromone","synonyms":[{"name":"cell morphology, round cells during cellular response to pheromone","type":"related"},{"name":"cell morphology, rounded cells during cellular response to pheromone","type":"related"},{"name":"rounded cell during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006538"}


id: PBO:0070203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 128 pseudogene","termid":"PBO:0070203"}


id: GO:0071171
data:
  {"annotated_genes":["SJAG_00073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89451],"is_not":false,"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"A DNA replication termination process that takes place at the RTS1 termination site in the mating type locus, in a specific direction required for subsequent imprinting and mating-type switching.","definition_xrefs":["PMID:18723894","GOC:vw","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific DNA replication termination","termid":"GO:0071170"},{"relation_name":"part_of","term_name":"mating-type locus imprinting","termid":"GO:0071515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"site-specific DNA replication termination at RTS1 barrier","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071171","terms_by_termid":{"GO:0071171":null}}


id: GO:0018883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"caprolactam metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cap"],"synonyms":[{"name":"caprolactam metabolism","type":"exact"}],"termid":"GO:0018883"}


id: GO:0032347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"aldosterone biosynthetic process","termid":"GO:0032342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of aldosterone biosynthetic process","termid":"GO:0032347"}


id: GO:1990884
data:
  {"annotated_genes":["SJAG_01877","SJAG_01638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904812"},{"annotations":[88708,103400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051391"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of one or more acetyl groups to specific residues in an RNA molecule.","definition_xrefs":["PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01638":null,"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA acetylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990884","terms_by_termid":{"GO:0051391":null,"GO:1904812":null}}


id: PBO:0064463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 1, catalytic subunit","termid":"PBO:0064463"}


id: PBO:0113011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of formins and polarisome components in mitosis, and survival after spindle assembly checkpoint delay; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0113011"}


id: PBO:0090544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER uridine diphosphate-glucose transmembrane transporter Hut1","termid":"PBO:0090544"}


id: GO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 5 metabotropic glutamate receptor binding","synonyms":[{"name":"type 5 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031802"}


id: PBO:0005791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin regulatory subunit (predicted)","termid":"PBO:0005791"}


id: FYPO:0002638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated more frequently than normal, typically under conditions that do not cause checkpoint activation in wild-type cells. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"activation of mitotic spindle assembly checkpoint increased","type":"exact"},{"name":"increased Bub1 foci","type":"related"},{"name":"increased Mad2 foci","type":"related"},{"name":"increased activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"increased mitotic cell cycle spindle assembly checkpoint activation","type":"exact"}],"termid":"FYPO:0002638"}


id: PBO:0005405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Got1 (predicted)","termid":"PBO:0005405"}


id: GO:0038089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of the orderly movement of a cell from one site to another.","definition_xrefs":["GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell migration by vascular endothelial growth factor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell migration","type":"narrow"},{"name":"VEGF-induced cell migration","type":"exact"},{"name":"positive regulation of cell migration by VEGF signaling pathway","type":"exact"},{"name":"positive regulation of cell migration by vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:0038089"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: PBO:0004258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, unknown biological role","termid":"PBO:0004258"}


id: PBO:0070674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 45","termid":"PBO:0070674"}


id: GO:0051095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of helicase activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of helicase activity","termid":"GO:0051095"}


id: PATO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000544 light_quality sensitivity value (obsolete PATO:0000544)","termid":"PATO:0000544"}


id: PBO:0003105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class II) Clr3","termid":"PBO:0003105"}


id: PBO:0080339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 103 pseudogene","termid":"PBO:0080339"}


id: GO:2000211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamate metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate metabolic process","synonyms":[{"name":"regulation of glutamate metabolism","type":"exact"},{"name":"regulation of glutamic acid metabolic process","type":"exact"},{"name":"regulation of glutamic acid metabolism","type":"exact"}],"termid":"GO:2000211"}


id: GO:0021585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the pons. This process pertains to the physical shaping of a rudimentary structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"pons morphogenesis","termid":"GO:0021583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons structural organization","synonyms":[{"name":"pons structural organisation","type":"exact"}],"termid":"GO:0021585"}


id: GO:0060448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lung bud bifurcates.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of terminal units involved in lung branching","synonyms":[{"name":"bud bifurcation involved in lung branching","type":"exact"}],"termid":"GO:0060448"}


id: GO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"positive regulation of isotype switching","synonyms":[{"name":"activation of isotype switching","type":"narrow"},{"name":"positive regulation of class switch recombination","type":"exact"},{"name":"positive regulation of class switching","type":"exact"},{"name":"positive regulation of isotype switch recombination","type":"exact"},{"name":"stimulation of isotype switching","type":"narrow"},{"name":"up regulation of isotype switching","type":"exact"},{"name":"up-regulation of isotype switching","type":"exact"},{"name":"upregulation of isotype switching","type":"exact"}],"termid":"GO:0045830"}


id: SO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine","secondary_identifiers":["RNAMOD:037"],"synonyms":[{"name":"yW","type":"exact"}],"termid":"SO:0001332"}


id: PBO:0052209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 5","termid":"PBO:0052209"}


id: FYPO:0001713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal malate import","synonyms":[{"name":"abnormal malate import across plasma membrane","type":"exact"},{"name":"abnormal malate import during mitotic cell cycle","type":"related"},{"name":"abnormal malate import during vegetative growth","type":"exact"},{"name":"abnormal malate import into cell","type":"exact"},{"name":"abnormal malate uptake","type":"exact"},{"name":"abnormal malic acid import","type":"related"}],"termid":"FYPO:0001713"}


id: GO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycine oxidase activity","secondary_identifiers":["MetaCyc:RXN-8673","MetaCyc:RXN-8672","MetaCyc:1.4.3.19-RXN","MetaCyc:RXN-8674"],"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799"}


id: PBO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, implicated in DNA repair","termid":"PBO:0090447"}


id: FYPO:0006018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer nuclear pore complexes than normal.","definition_xrefs":["PomBase:mah","PMID:28242692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased nuclear pore density","synonyms":[{"name":"decreased NPC density","type":"exact"},{"name":"decreased nuclear pore complex density","type":"exact"},{"name":"decreased nuclear pore density during mitotic cell cycle","type":"exact"},{"name":"decreased nuclear pore density during vegetative growth","type":"exact"},{"name":"nuclear pore complexes present in decreased number","type":"exact"},{"name":"nuclear pores present in decreased number","type":"exact"},{"name":"reduced nuclear pore density","type":"exact"}],"termid":"FYPO:0006018"}


id: GO:0072316
data:
  {"annotated_genes":["SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107389],"is_not":false,"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan catabolic process","termid":"GO:0030980"},{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","termid":"GO:0072000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"alpha-glucan breakdown involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan catabolism involved in ascospore release from ascus","type":"exact"},{"name":"alpha-glucan degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072316","terms_by_termid":{"GO:0072316":null}}


id: PBO:0078287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 20-1","termid":"PBO:0078287"}


id: PR:Q7LKZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.13c gene.","definition_xrefs":["UniProtKB:Q7LKZ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C1020.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.13c","synonyms":[{"name":"Spom972h-SPCC1020.13c","type":"exact"}],"termid":"PR:Q7LKZ6"}


id: FYPO:0006571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah","PMID:9614176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity during cellular response to pheromone","termid":"FYPO:0006571"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: PBO:0061875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OOEP pseudogene 2","termid":"PBO:0061875"}


id: PBO:0072531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 61","termid":"PBO:0072531"}


id: GO:1904732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of electron transfer activity.","definition_xrefs":["PMID:25416781","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of electron transfer activity","synonyms":[{"name":"regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"regulation of amicyanin","type":"narrow"},{"name":"regulation of azurin","type":"narrow"},{"name":"regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"regulation of copper electron carrier","type":"narrow"},{"name":"regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of electron acceptor activity","type":"narrow"},{"name":"regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"regulation of electron donor activity","type":"narrow"},{"name":"regulation of electron transfer flavoprotein","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"regulation of electron transporter activity","type":"exact"},{"name":"regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"regulation of polyferredoxin","type":"narrow"},{"name":"regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"regulation of rubredoxin","type":"narrow"},{"name":"regulation of small blue copper electron carrier","type":"narrow"},{"name":"regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904732"}


id: GO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-translocating F-type ATPase activity (obsolete GO:0016468)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"sodium-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016468"}


id: GO:0009152
data:
  {"annotated_genes":["SJAG_04122","SJAG_02741","SJAG_01298","SJAG_02850","SJAG_02598","SJAG_05277","SJAG_03114","SJAG_00438","SJAG_01081","SJAG_02564","SJAG_01402","SJAG_07003","SJAG_04681","SJAG_03355","SJAG_04849","SJAG_MIT09","SJAG_03731","SJAG_00982","SJAG_03064","SJAG_00542","SJAG_04422","SJAG_00044","SJAG_01859","SJAG_01139","SJAG_00836","SJAG_02887","SJAG_02038","SJAG_03925","SJAG_03140","SJAG_04634","SJAG_00866","SJAG_04123","SJAG_00915","SJAG_05204","SJAG_04007","SJAG_03313","SJAG_00427","SJAG_01814","SJAG_04288","SJAG_00964","SJAG_01471","SJAG_02364","SJAG_MIT37","SJAG_MIT15","SJAG_01070","SJAG_00133","SJAG_04627","SJAG_03290","SJAG_02006","SJAG_06634","SJAG_00985","SJAG_01661","SJAG_02158","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106438],"is_not":false,"summary":null,"term":"GO:0009152"},{"annotations":[85012,99520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106325,99521,95665,106436,93909,115018,113411,110572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[94481,89351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[83568,95127,104669,91110,114502,110308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[94232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[112910,89638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[113115,110905,85502,88322,106680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[104350,59024,97287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[98334,104351,96168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[115019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89860,97907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[103553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[66515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[88949,99753,111911,115101,99127,103981,115095,101081,115105,103892,99782,90947,85257,104865,89375,89973,97910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114046],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00133":null,"SJAG_00427":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00982":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01139":null,"SJAG_01298":null,"SJAG_01402":null,"SJAG_01471":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02006":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02741":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03355":null,"SJAG_03731":null,"SJAG_03925":null,"SJAG_04007":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04288":null,"SJAG_04422":null,"SJAG_04627":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05277":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleotide anabolism","type":"exact"},{"name":"purine ribonucleotide biosynthesis","type":"exact"},{"name":"purine ribonucleotide formation","type":"exact"},{"name":"purine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009152","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006188":null,"GO:0006189":null,"GO:0009152":null,"GO:0015937":null,"GO:0015986":null,"GO:0019427":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0035338":null,"GO:0042776":null,"GO:0044208":null,"GO:0044209":null,"GO:1905706":null,"GO:1990181":null,"GO:2001295":null}}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: PBO:0079159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 18","termid":"PBO:0079159"}


id: PBO:0084106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haploid-specific gene repressed by a1-alpha2; turned off in sir3 null strains, absence enhances the sensitivity of rad52-327 cells to campothecin almost 100-fold","termid":"PBO:0084106"}


id: GO:0036184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asperthecin metabolic process","termid":"GO:0036182"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"asperthecin biosynthetic process","synonyms":[{"name":"asperthecin biosynthesis","type":"exact"},{"name":"asperthecin formation","type":"exact"},{"name":"asperthecin synthesis","type":"exact"}],"termid":"GO:0036184"}


id: GO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in fruit ripening","synonyms":[{"name":"cell wall modification during ripening","type":"related"}],"termid":"GO:0009829"}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: PBO:0057214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-1","termid":"PBO:0057214"}


id: GO:0030150
data:
  {"annotated_genes":["SJAG_04218","SJAG_02077","SJAG_01597","SJAG_03502","SJAG_04996","SJAG_03415","SJAG_01442","SJAG_01120","SJAG_03358","SJAG_01615","SJAG_04014","SJAG_00373","SJAG_01684","SJAG_01879","SJAG_04432","SJAG_04336","SJAG_02917","SJAG_00564","SJAG_03560","SJAG_05259","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84474,85664,87009,90623,92987,95339,95524,95634,96413,98787,99380,101262,102249,103590,103650,103673,105955,107875,111296,112853,113306],"is_not":false,"summary":null,"term":"GO:0030150"}]},"cv_name":"biological_process","definition":"The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00564":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein import into mitochondrial matrix","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial matrix protein import","type":"exact"},{"name":"mitochondrial translocation","type":"broad"},{"name":"protein transport into mitochondrial matrix","type":"exact"}],"termid":"GO:0030150","terms_by_termid":{"GO:0030150":null}}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: PBO:0060017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 5","termid":"PBO:0060017"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","PubMed:12766232","Unimod:188#I"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: PBO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 9, pseudogene","termid":"PBO:0047718"}


id: MOD:00636
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-ethylcysteine.","definition_xrefs":["Unimod:327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-ethylcysteine (Ser)","synonyms":[{"name":"Delta:H(4)C(2)O(-1)S(1)","type":"related"},{"name":"S-Ethylcystine from Serine","type":"related"}],"termid":"MOD:00636"}


id: PATO:0000688
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's not occurring or existing at the same time or having the same period or phase.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous","termid":"PATO:0000688"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: PBO:0113153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase, component of both Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the Hmt1p methyltransferase; delays late firing of single copy origins by opposing the Fkh1/2 origin activation pathway","termid":"PBO:0113153"}


id: PBO:0003318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein (predicted)","termid":"PBO:0003318"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: PBO:0041971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 1","termid":"PBO:0041971"}


id: PBO:0005186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase (predicted)","termid":"PBO:0005186"}


id: GO:0016748
data:
  {"annotated_genes":["SJAG_03961","SJAG_00097","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77369,91881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[108146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004149"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a succinyl (3-carboxypropanoyl) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_03163":null,"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"succinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016748","terms_by_termid":{"GO:0003870":null,"GO:0004149":null}}


id: PBO:0025528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-H ortholog Fta3","termid":"PBO:0025528"}


id: PBO:0113545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into vacuole; overexpression confers resistance to cobalt and rhodium; targeted to vacuole via AP-3 pathway; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0113545"}


id: GO:0005471
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106974],"is_not":false,"summary":null,"term":"GO:0005471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).","definition_xrefs":["TC:2.A.29.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATP:ADP antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005349","RHEA:34999"],"synonyms":[{"name":"ADP/ATP carrier protein","type":"exact"},{"name":"ADP/ATP translocase","type":"exact"},{"name":"ATP/ADP exchange","type":"exact"},{"name":"ATP/ADP exchanger","type":"exact"},{"name":"adenine nucleotide translocase","type":"exact"}],"termid":"GO:0005471","terms_by_termid":{"GO:0005471":null}}


id: GO:0017125
data:
  {"annotated_genes":["SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98996],"is_not":false,"summary":null,"term":"GO:0017125"}]},"cv_name":"molecular_function","definition":"Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA.","definition_xrefs":["PMID:10535901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"deoxycytidyl transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110308","GO:0019986"],"synonyms":[{"name":"deoxycytidyl transferase activity, template-dependent","type":"narrow"}],"termid":"GO:0017125","terms_by_termid":{"GO:0017125":null}}


id: GO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant vasodilation of blood vessels, usually causing a reduction in blood pressure, in the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:21050868","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of blood pressure in another organism","termid":"GO:0044500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in vasodilation in another organism","synonyms":[{"name":"envenomation resulting in modulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in regulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in vasodilation in other organism","type":"exact"}],"termid":"GO:0044551"}


id: PR:Q9P7X9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 39 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier P23A10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.06","secondary_identifiers":["UniProtKB:Q9P7X9"],"synonyms":[{"name":"Spom972h-SLC25A39","type":"exact"}],"termid":"PR:Q9P7X9"}


id: SO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyldihydrouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyldihydrouridine","secondary_identifiers":["RNAMOD:093"],"synonyms":[{"name":"5-methyldihydrouridine","type":"exact"},{"name":"five methyldihydrouridine","type":"exact"},{"name":"m5D","type":"exact"}],"termid":"SO:0001376"}


id: PBO:0084468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKK involved in the protein kinase C signaling pathway; involved in control of cell integrity; upon activation by Bck1p phosphorylates downstream target, Slt2p; functionally redundant with Mkk2p; MKK1 has a paralog, MKK2, that arose from the whole genome duplication","termid":"PBO:0084468"}


id: PBO:0086731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant displays elevated sensitivity to expression of a mutant huntingtin fragment or of alpha-synuclein; YGL262W is not an essential gene","termid":"PBO:0086731"}


id: GO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sorbitol 6-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sorbitol-6-phosphate 2-dehydrogenase activity","secondary_identifiers":["RHEA:19837","MetaCyc:SORB6PDEHYDROG-RXN"],"synonyms":[{"name":"D-glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol 6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"ketosephosphate reductase activity","type":"related"},{"name":"sorbitol-6-P-dehydrogenase activity","type":"related"}],"termid":"GO:0009010"}


id: GO:0035050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube development","termid":"GO:0035050"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: GO:0004326
data:
  {"annotated_genes":["SJAG_00529","SJAG_03224"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89037,100835],"is_not":false,"summary":null,"term":"GO:0004326"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1).","definition_xrefs":["EC:6.3.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-200682","MetaCyc:FOLYLPOLYGLUTAMATESYNTH-RXN","Reactome:R-HSA-197958","RHEA:10580","Reactome:R-HSA-200681"],"synonyms":[{"name":"FPGS activity","type":"related"},{"name":"N(10)-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"N10-formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"folate polyglutamate synthetase activity","type":"related"},{"name":"folylpoly(gamma-glutamate) synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthase activity","type":"related"},{"name":"folylpoly-gamma-glutamate synthetase-dihydrofolate synthetase activity","type":"related"},{"name":"folylpolyglutamate synthase activity","type":"exact"},{"name":"folylpolyglutamate synthetase activity","type":"related"},{"name":"folylpolyglutamyl synthetase activity","type":"related"},{"name":"formyltetrahydropteroyldiglutamate synthetase activity","type":"related"},{"name":"tetrahydrofolate synthase activity","type":"related"},{"name":"tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming) activity","type":"related"},{"name":"tetrahydrofolyl-[gamma-Glu]n:L-glutamate gamma-ligase (ADP-forming)","type":"related"},{"name":"tetrahydropteroyl-[gamma-polyglutamate]:L-glutamate gamma-ligase (ADP-forming)","type":"related"}],"termid":"GO:0004326","terms_by_termid":{"GO:0004326":null}}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: GO:0000377
data:
  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id: PBO:0054405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1801","termid":"PBO:0054405"}


id: GO:0071679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a commissural neuron is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"commissural neuron axon guidance","synonyms":[{"name":"commissural neuron axon pathfinding","type":"exact"}],"termid":"GO:0071679"}


id: GO:0039526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["UniProtKB-KW:KW-1119","GOC:bf","GOC:sp","GOC:mtg_apoptosis","PMID:15225638","PMID:12867651","PMID:16037790"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host apoptosis (obsolete GO:0039526)","synonyms":[{"name":"modulation by virus of host apoptosis","type":"exact"},{"name":"modulation by virus of host apoptotic process","type":"exact"},{"name":"modulation of host cell apoptosis by virus","type":"exact"},{"name":"perturbation by virus of host apoptotic process","type":"exact"},{"name":"regulation by virus of host apoptosis","type":"exact"}],"termid":"GO:0039526"}


id: GO:0008556
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108426],"is_not":false,"summary":null,"term":"GO:0008556"},{"annotations":[108427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + K+(out) = ADP + phosphate + K+(in).","definition_xrefs":["RHEA:16777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type potassium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.2.2.6","GO:0015618","MetaCyc:TRANS-RXN-2"],"synonyms":[{"name":"ATP phosphohydrolase (K+-importing)","type":"related"},{"name":"ATP-dependent potassium transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled potassium transmembrane transporter activity","type":"related"},{"name":"K(+)-importing ATPase activity","type":"narrow"},{"name":"K(+)-transporting ATPase activity","type":"related"},{"name":"K+-importing ATPase activity","type":"related"},{"name":"K+-transporting ATPase activity","type":"exact"},{"name":"potassium ABC transporter","type":"narrow"},{"name":"potassium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"potassium transporting ATPase activity","type":"exact"},{"name":"potassium-importing ATPase activity","type":"narrow"},{"name":"potassium-transporting ATPase activity","type":"exact"},{"name":"potassium-uptake-ATPase activity","type":"exact"}],"termid":"GO:0008556","terms_by_termid":{"GO:0008556":null,"GO:0008900":null}}


id: PBO:0058850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8079","termid":"PBO:0058850"}


id: PBO:0004359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere binding protein Rap1","termid":"PBO:0004359"}


id: GO:0042659
data:
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id: PBO:0080026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 12","termid":"PBO:0080026"}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: PBO:0064931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG related coactivator 1","termid":"PBO:0064931"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: GO:0009100
data:
  {"annotated_genes":["SJAG_01021","SJAG_03311","SJAG_01858","SJAG_04053","SJAG_03188","SJAG_03333","SJAG_00747","SJAG_04401","SJAG_02648","SJAG_02996","SJAG_03149","SJAG_01950","SJAG_01069","SJAG_04127","SJAG_04095","SJAG_04363","SJAG_03656","SJAG_00437","SJAG_02163","SJAG_03535","SJAG_03280","SJAG_04906","SJAG_01972","SJAG_00183","SJAG_01595","SJAG_02903","SJAG_04728","SJAG_03082","SJAG_00831","SJAG_01264","SJAG_03871","SJAG_01006","SJAG_02102","SJAG_02783","SJAG_02519","SJAG_03764","SJAG_04821","SJAG_00816","SJAG_03330","SJAG_00394","SJAG_00334","SJAG_00554","SJAG_01389","SJAG_01491","SJAG_03056","SJAG_04952","SJAG_03676","SJAG_03790","SJAG_04231","SJAG_01276","SJAG_04571","SJAG_05219","SJAG_03150","SJAG_04090","SJAG_03032","SJAG_05348","SJAG_02056","SJAG_03774","SJAG_00598","SJAG_04316","SJAG_00924","SJAG_04770","SJAG_03555","SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100594,100178,93991,101024,102032,114418,96860,105097,89127,83643,101139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[87231,96086,105366,108631,99670,99870,86494,94498,112812,96103,107161,90002,94445,102795,94779,92526,98395,101077],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[89647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[83644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009101"},{"annotations":[94870,89244,89246,83519,89245,94868,94869,94871,98807,114088,114561,89247,109838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006491"},{"annotations":[113874,112154,91815,104094,96123,110036,109839,93884,104466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[94872,106792,98808,83645,108775,89251,96861,94854,98881,101025,101140,113373,106786,89249,89248,95018,94874,114089,94853,94875,95880,105098,114419,102033,106983,94873,85331,95740,96426,94852,100595,94861,93992,96087,97438,105368,94851,89250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[97447,107162,109840,112916,91430,105369,98662],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[106787,94862,89128,101838,97634,106793,114090,98809,100179,100596,96862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[102034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"},{"annotations":[91816,89648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01858":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein metabolism","type":"exact"}],"termid":"GO:0009100","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006491":null,"GO:0006493":null,"GO:0009101":null,"GO:0018279":null,"GO:0035269":null,"GO:0097466":null,"GO:1904380":null}}


id: PBO:0039077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGPAT4 intronic transcript 1","termid":"PBO:0039077"}


id: GO:0033184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone ubiquitination (obsolete GO:0033184)","termid":"GO:0033184"}


id: SO:0001158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -60 and +1 relative to the TSS. Consensus sequence is AWCAGCTGWT. Tends to co-occur with DMv2 (SO:0001161). Tends to not occur with DPE motif (SO:0000015).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E_box_motif","synonyms":[{"name":"AWCAGCTGWT","type":"narrow"},{"name":"E box motif","type":"exact"},{"name":"NDM5","type":"related"},{"name":"generic E box motif","type":"exact"}],"termid":"SO:0001158"}


id: PBO:0068491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 75, pseudogene","termid":"PBO:0068491"}


id: PBO:0057414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o-2","termid":"PBO:0057414"}


id: GO:2000583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-alpha signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-alpha signaling pathway","termid":"GO:0035790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"regulation of PDGFR-alpha signaling pathway","type":"related"},{"name":"regulation of alphaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:2000583"}


id: GO:0097170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ADP-L-glycero-beta-D-manno-heptose metabolic process","synonyms":[{"name":"ADP-L-glycero-beta-D-manno-heptose metabolism","type":"exact"}],"termid":"GO:0097170"}


id: FYPO:0003643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased urease activity","synonyms":[{"name":"reduced urease activity","type":"exact"}],"termid":"FYPO:0003643"}


id: PBO:0077182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 6","termid":"PBO:0077182"}


id: GO:0042555
data:
  {"annotated_genes":["SJAG_01354","SJAG_00857","SJAG_00884","SJAG_04210","SJAG_01762","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88057,102488,103319,106292,111168,111336],"is_not":false,"summary":null,"term":"GO:0042555"}]},"cv_name":"cellular_component","definition":"A hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["PMID:11282021","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mini-chromosome maintenance complex","type":"exact"}],"termid":"GO:0042555","terms_by_termid":{"GO:0042555":null}}


id: GO:1904221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:16120614","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"down regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down regulation of SPT","type":"related"},{"name":"down regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"down-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"down-regulation of SPT","type":"related"},{"name":"down-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"down-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"down-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"downregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"downregulation of SPT","type":"related"},{"name":"downregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"downregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"downregulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"inhibition of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"inhibition of SPT","type":"related"},{"name":"inhibition of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"inhibition of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"inhibition of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"negative regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"negative regulation of SPT","type":"related"},{"name":"negative regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"negative regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"}],"termid":"GO:1904221"}


id: PBO:0085355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphomannomutase; involved in synthesis of GDP-mannose and dolichol-phosphate-mannose; required for folding and glycosylation of secretory proteins in the ER lumen; human homolog PMM2 complements yeast mutants","termid":"PBO:0085355"}


id: PBO:0069982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1277, pseudogene","termid":"PBO:0069982"}


id: PBO:0058019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3945","termid":"PBO:0058019"}


id: PBO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family","termid":"PBO:0014254"}


id: PR:Q9P6I7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dea2 gene.","definition_xrefs":["UniProtKB:Q9P6I7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.02","synonyms":[{"name":"AAH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ADE (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dea2","type":"exact"},{"name":"adenine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I7"}


id: PBO:0083877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase; involved in sulfonate catabolism for use as a sulfur source; contains sequence that resembles a J domain (typified by the E. coli DnaJ protein); induced by sulphur starvation","termid":"PBO:0083877"}


id: FYPO:0000317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a population contains cells with more than one phenotype, usually different morphologies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mixed population (obsolete FYPO:0000317)","termid":"FYPO:0000317"}


id: GO:1905614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"negatively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental vegetative growth","synonyms":[{"name":"down regulation of developmental vegetative growth","type":"exact"},{"name":"down-regulation of developmental vegetative growth","type":"exact"},{"name":"downregulation of developmental vegetative growth","type":"exact"},{"name":"inhibition of developmental vegetative growth","type":"narrow"}],"termid":"GO:1905614"}


id: GO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->6)-beta-D-glucan metabolic process","termid":"GO:0006077"},{"relation_name":"is_a","term_name":"beta-glucan catabolic process","termid":"GO:0051275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan catabolic process","synonyms":[{"name":"1,6-beta-D-glucan breakdown","type":"exact"},{"name":"1,6-beta-D-glucan catabolic process","type":"exact"},{"name":"1,6-beta-D-glucan catabolism","type":"exact"},{"name":"1,6-beta-D-glucan degradation","type":"exact"},{"name":"beta-1,6 glucan breakdown","type":"exact"},{"name":"beta-1,6 glucan catabolic process","type":"exact"},{"name":"beta-1,6 glucan catabolism","type":"exact"},{"name":"beta-1,6 glucan degradation","type":"exact"}],"termid":"GO:0006079"}


id: PBO:0064759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIC antisense RNA 1","termid":"PBO:0064759"}


id: PBO:0032742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA deacylase Dtd1 (predicted)","termid":"PBO:0032742"}


id: GO:0019940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete SUMO-dependent protein catabolic process (obsolete GO:0019940)","synonyms":[{"name":"SUMO-dependent protein breakdown","type":"exact"},{"name":"SUMO-dependent protein catabolic process","type":"exact"},{"name":"SUMO-dependent protein catabolism","type":"exact"},{"name":"SUMO-dependent protein degradation","type":"exact"}],"termid":"GO:0019940"}


id: GO:0120115
data:
  {"annotated_genes":["SJAG_02469","SJAG_01819","SJAG_03070","SJAG_01327","SJAG_05240","SJAG_03460","SJAG_03954"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91920,102409,104606,108952,110995,111929,112472],"is_not":false,"summary":null,"term":"GO:0120115"}]},"cv_name":"cellular_component","definition":"A heteroheptameric, nuclear protein complex composed of Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Lsm8, or orthologs thereof, that selectively binds to snRNAs, in particular U6 or U6atac snRNAs, and also to unspliced transcripts localized within the nucleus.","definition_xrefs":["GOC:krc","PMID:19121818","PMID:27627834","PMID:23221597","PMID:28768202","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Lsm2-8 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120115","terms_by_termid":{"GO:0120115":null}}


id: GO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete viral transmission by vector (obsolete GO:0044009)","termid":"GO:0044009"}


id: GO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulette, a 107 kDa protein associated with the I-Z-I complex of cardiac myofibrils. It shows a high degree of homology with skeletal muscle nebulin.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulette binding (obsolete GO:0051420)","synonyms":[{"name":"nebulette binding","type":"exact"}],"termid":"GO:0051420"}


id: PBO:0085223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pantothenate synthase; also known as pantoate-beta-alanine ligase, required for pantothenic acid biosynthesis, deletion causes pantothenic acid auxotrophy, homologous to E. coli panC","termid":"PBO:0085223"}


id: GO:0002822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:mtg_sensu","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"}


id: PBO:0029703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_nitrogen_starvation","termid":"PBO:0029703"}


id: PBO:0089280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, transmembrane ring glycoprotein subunit Pom152","termid":"PBO:0089280"}


id: PBO:0065164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich basic protein 1","termid":"PBO:0065164"}


id: PBO:0067471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 601, pseudogene","termid":"PBO:0067471"}


id: GO:0043113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor metabolic process that results in grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response.","definition_xrefs":["GOC:pr","GOC:bf","PMID:19747931","PMID:21453460","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor clustering","termid":"GO:0043113"}


id: GO:0048758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a companion cell. The companion cell is the specialized parenchyma cell associated with a sieve-tube member in angiosperm phloem and arising from the same mother cell as the sieve-tube member.","definition_xrefs":["CL:0000284","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant parenchymal cell differentiation","termid":"GO:0048760"},{"relation_name":"part_of","term_name":"phloem development","termid":"GO:0010088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"companion cell differentiation","termid":"GO:0048758"}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: GO:0031230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of cell outer membrane (obsolete GO:0031230)","synonyms":[{"name":"intrinsic to cell outer membrane","type":"narrow"}],"termid":"GO:0031230"}


id: FYPO:0006737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of alpha-hibitakanine. Normally, wild-type cell populations survive longer in the presence of alpha-hibitakanine than in its absence.","definition_xrefs":["PomBase:mah","PMID:29900664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by alpha-hibitakanine","synonyms":[{"name":"chronological lifespan unaffected by alpha-hibitakanine","type":"related"},{"name":"loss of chronological lifespan extension by alpha-hibitakanine","type":"related"},{"name":"loss of stationary phase viability extension in presence of alpha-hibitakanine","type":"exact"}],"termid":"FYPO:0006737"}


id: GO:0140540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:15749104","PMID:18457993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of melanization defense response","termid":"GO:0035009"},{"relation_name":"is_a","term_name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"},{"relation_name":"negatively_regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation melanotic encapsulation of foreign target","termid":"GO:0140540"}


id: GO:1904148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonylphenol stimulus.","definition_xrefs":["PMID:19260726","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nonylphenol","termid":"GO:1904147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonylphenol","termid":"GO:1904148"}


id: PBO:0087387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol transport protein and functional homolog of human NPC2/He1; acts with Ncr1p in sterol trafficking; human NPC2 is a cholesterol-binding protein whose deficiency causes Niemann-Pick type C2 disease involving retention of cholesterol in lysosomes; yeast NPC2 can complement mutations in human NPC2","termid":"PBO:0087387"}


id: FYPO:0006967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of AICAR measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular AICAR level","synonyms":[{"name":"decreased cellular AICAR level during mitotic cell cycle","type":"related"},{"name":"decreased cellular AICAR level during vegetative growth","type":"exact"},{"name":"reduced cellular AICAR level","type":"exact"}],"termid":"FYPO:0006967"}


id: FYPO:0003869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the amount of protein encoded by genes normally induced by exposure to hydrogen peroxide measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PMID:20133687","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of hydrogen peroxide-induced proteins during G0","synonyms":[{"name":"increased level of H2O2-induced proteins during G0","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during cell quiescence","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during quiescence","type":"exact"},{"name":"increased level of proteins expressed during cellular response to hydrogen peroxide during G0","type":"exact"},{"name":"increased level of proteins induced by hydrogen peroxide during G0","type":"exact"},{"name":"increased protein level of genes (normally) induced during H2O2 stress during G0","type":"exact"}],"termid":"FYPO:0003869"}


id: GO:0044181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a multicellular organism grows in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a multicellular organism","termid":"GO:0044181"}


id: MOD:01910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one fluorine atom.","definition_xrefs":["Unimod:127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated residue","synonyms":[{"name":"F1Res","type":"exact"}],"termid":"MOD:01910"}


id: GO:0044081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus interferes with, inhibits or disrupts a nitric oxide mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29089430","MITRE:tk","PMID:23167250"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host nitric oxide-mediated signaling (obsolete GO:0044081)","synonyms":[{"name":"disruption of host nitric oxide-mediated signaling","type":"exact"},{"name":"modulation by symbiont of host nitric oxide mediated signal transduction","type":"exact"},{"name":"modulation of host nitric oxide-mediated signal transduction by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signaling by symbiont","type":"exact"},{"name":"modulation of host nitric oxide-mediated signalling by symbiont","type":"exact"},{"name":"regulation by symbiont of host nitric oxide-mediated signal transduction","type":"broad"},{"name":"suppression of host nitric oxide-mediated signaling","type":"exact"}],"termid":"GO:0044081"}


id: PBO:0003904
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by copper limitation","termid":"PBO:0003904"}


id: PR:O74486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1906.03","synonyms":[{"name":"Spom972h-wtf19","type":"exact"}],"termid":"PR:O74486"}


id: FYPO:0001665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is lower than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"decreased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"decreased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"decreased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"},{"name":"reduced cellular cAMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001665"}


id: GO:0110142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of enzymes and accessory factors of the ubiquinone (CoQ) biosynthesis pathway. In E. coli, the complex is composed of seven proteins: UbiE, F, G, H, I, J and K. In eukaryotes, the complex is located on the matrix face of the inner mitochondrial membrane and includes COQ3, COQ4, COQ5, COQ6, COQ7, COQ9.","definition_xrefs":["GOC:imk","PMID:30686758","PMID:28927698","PMID:27060254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ubiquinone biosynthesis complex","synonyms":[{"name":"CoQ Biosynthetic Complex","type":"exact"},{"name":"CoQ metabolon","type":"exact"},{"name":"CoQ-synthome","type":"exact"},{"name":"Ubi complex","type":"exact"},{"name":"complex Q","type":"exact"}],"termid":"GO:0110142"}


id: MOD:01593
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01593"}


id: PBO:0046032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit beta","termid":"PBO:0046032"}


id: PBO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor family member 2B","termid":"PBO:0051727"}


id: PBO:0031771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_fermentation","termid":"PBO:0031771"}


id: PBO:0028712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_global_homologous_chromosome_pairing","termid":"PBO:0028712"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","secondary_identifiers":["KEGG_REACTION:R05613"],"synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: GO:0120507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the base-exchange of a guanine residue with queuine at the wobble position of the anticodon of tRNAs. The eukaryotic tRNA-guanine transglycosylase exists as a heterodimer of a catalytic subunit (QTRT1 in humans) and an accessory subunit (QTRT2 in humans), whereas the bacterial enzyme is homodimeric.","definition_xrefs":["GOC:sjm","PMID:38181786","PMID:20354154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA-guanine transglycosylase complex","synonyms":[{"name":"TGT","type":"exact"},{"name":"queuine tRNA-ribosyltransferase complex","type":"exact"}],"termid":"GO:0120507"}


id: PBO:0075400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP140 nuclear body protein like","termid":"PBO:0075400"}


id: GO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion transport","termid":"GO:0003096"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"renal sodium ion absorption","synonyms":[{"name":"nephron sodium ion absorption","type":"exact"},{"name":"renal sodium ion reabsorption","type":"exact"}],"termid":"GO:0070294"}


id: GO:0102655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-trans-16:1-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-trans-16:1-phosphatidylglycerol desaturase activity (obsolete GO:0102655)","termid":"GO:0102655"}


id: PBO:0067798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 100","termid":"PBO:0067798"}


id: PBO:0043133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 1","termid":"PBO:0043133"}


id: GO:1901656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a glycoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycoside transport","termid":"GO:1901656"}


id: PATO:0001049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001049 absolute susceptibility (obsolete PATO:0001049)","termid":"PATO:0001049"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: GO:0060121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of vestibular hair cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"},{"relation_name":"part_of","term_name":"vestibular receptor cell morphogenesis","termid":"GO:0060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell stereocilium organization","synonyms":[{"name":"vestibular hair cell stereocilium organization","type":"exact"},{"name":"vestibular receptor cell stereocilium organisation","type":"exact"},{"name":"vestibular receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060121"}


id: GO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to F420, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"coenzyme F420 binding","termid":"GO:0070967"}


id: PBO:0082518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; complex acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0082518"}


id: FYPO:0003601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any rRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased rRNA precursor level","synonyms":[{"name":"decreased rRNA precursor transcript level","type":"exact"},{"name":"decreased rRNA precursor accumulation","type":"related"},{"name":"decreased rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"decreased rRNA precursor level during vegetative growth","type":"exact"},{"name":"reduced rRNA precursor level","type":"exact"}],"termid":"FYPO:0003601"}


id: PBO:0012264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal of transmembrane channel, truncated","termid":"PBO:0012264"}


id: PBO:0080295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 59 pseudogene","termid":"PBO:0080295"}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: GO:0030819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cAMP biosynthetic process (obsolete GO:0030819)","synonyms":[{"name":"activation of cAMP biosynthetic process","type":"narrow"},{"name":"positive regulation of 3',5' cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5' cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthesis","type":"exact"},{"name":"positive regulation of 3',5'-cAMP biosynthetic process","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthesis","type":"exact"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate biosynthetic process","type":"exact"},{"name":"positive regulation of cAMP anabolism","type":"exact"},{"name":"positive regulation of cAMP biosynthesis","type":"exact"},{"name":"positive regulation of cAMP formation","type":"exact"},{"name":"positive regulation of cAMP synthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthesis","type":"exact"},{"name":"positive regulation of cyclic AMP biosynthetic process","type":"exact"},{"name":"stimulation of cAMP biosynthetic process","type":"narrow"},{"name":"up regulation of cAMP biosynthetic process","type":"exact"},{"name":"up-regulation of cAMP biosynthetic process","type":"exact"},{"name":"upregulation of cAMP biosynthetic process","type":"exact"}],"termid":"GO:0030819"}


