# terms

id: GO:0032208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a recombinational process involved in the maintenance of proper telomeric length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via recombination","termid":"GO:0032207"},{"relation_name":"is_a","term_name":"negative regulation of mitotic recombination","termid":"GO:0045950"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination at telomere","termid":"GO:0048239"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200","GO:0006310"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via recombination","synonyms":[{"name":"down regulation of telomere maintenance via recombination","type":"exact"},{"name":"down-regulation of telomere maintenance via recombination","type":"exact"},{"name":"downregulation of telomere maintenance via recombination","type":"exact"},{"name":"inhibition of telomere maintenance via recombination","type":"narrow"}],"termid":"GO:0032208"}


id: PBO:0080252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 15 pseudogene","termid":"PBO:0080252"}


id: GO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin metabolic process","termid":"GO:0042428"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin biosynthetic process","secondary_identifiers":["Wikipedia:Serotonin"],"synonyms":[{"name":"serotonin anabolism","type":"exact"},{"name":"serotonin biosynthesis","type":"exact"},{"name":"serotonin formation","type":"exact"},{"name":"serotonin synthesis","type":"exact"}],"termid":"GO:0042427"}


id: PBO:0027057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_beta-glucan_level","termid":"PBO:0027057"}


id: PBO:0046684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 2","termid":"PBO:0046684"}


id: PBO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rhp54 delta cells","termid":"PBO:0002176"}


id: PBO:0036177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0036177"}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:15999093","PMID:19161428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: PBO:0089496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker, pericentrin/kendrin Pcp1","termid":"PBO:0089496"}


id: GO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating oxidative stress is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxidative stress","termid":"GO:0070994"}


id: PBO:0052212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 intronic transcript 1","termid":"PBO:0052212"}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: RO:0002338
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from some initial location l to some destination.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"RO:0002344"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_start_location","termid":"RO:0002338"}


id: PBO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster biogenesis protein Iba57 (predicted)","termid":"PBO:0016964"}


id: PBO:0113166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; phosphorylated by the AMPK Snf1p, leading to reduced levels of pyrophosphorylated IP7, increased filamentous and invasive growth and increased cell elongation","termid":"PBO:0113166"}


id: FYPO:0001775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to eisosome filament","termid":"FYPO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to eisosome filament","synonyms":[{"name":"abolished protein localisation to eisosome filament","type":"exact"},{"name":"abolished protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abolished protein localization to linear eisosome","type":"exact"},{"name":"protein localization to eisosome filament abolished","type":"exact"}],"termid":"FYPO:0001775"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: GO:0035887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell surrounding the aorta.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}


id: PBO:0085622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in energy metabolism under respiratory conditions; abundance is increased upon intracellular iron depletion or in response to DNA replication stress; suppresses pro-apoptotic effect of expressing human BAX in yeast cells; RGI1 has a paralog, RGI2, that arose from the whole genome duplication","termid":"PBO:0085622"}


id: GO:1900272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic potentiation","termid":"GO:1900271"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of long-term synaptic potentiation","synonyms":[{"name":"down regulation of LTP","type":"related"},{"name":"down regulation of long-term potentiation","type":"broad"},{"name":"down regulation of long-term synaptic potentiation","type":"exact"},{"name":"down-regulation of LTP","type":"related"},{"name":"down-regulation of long-term potentiation","type":"broad"},{"name":"down-regulation of long-term synaptic potentiation","type":"exact"},{"name":"downregulation of LTP","type":"related"},{"name":"downregulation of long-term potentiation","type":"broad"},{"name":"downregulation of long-term synaptic potentiation","type":"exact"},{"name":"inhibition of LTP","type":"related"},{"name":"inhibition of long-term potentiation","type":"broad"},{"name":"inhibition of long-term synaptic potentiation","type":"narrow"},{"name":"negative regulation of LTP","type":"related"},{"name":"negative regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900272"}


id: PBO:0081440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF295 antisense RNA 1","termid":"PBO:0081440"}


id: PBO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MID1","termid":"PBO:0016516"}


id: PBO:0084391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low complexity protein; mediates inhibition of Mep1p and Mep3p activity; hyperphosphorylated upon rapamycin treatment in a Tap42p-dependent manner; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylation and localization regulated by TORC1-effector kinase, Npr1p","termid":"PBO:0084391"}


id: PBO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 3","termid":"PBO:0044573"}


id: GO:0098948
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane (obsolete GO:0098948)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0098948"}


id: PBO:0046372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 7","termid":"PBO:0046372"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: PATO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process to oxygen","synonyms":[{"name":"sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001458"}


id: PBO:0073611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 2","termid":"PBO:0073611"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: GO:0009095
data:
  {"annotated_genes":["SJAG_03124","SJAG_00518","SJAG_04652","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104629,85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[85937,110816,94410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenylalanine and tyrosine from other compounds, including chorismate, via the intermediate prephenate.","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00518":null,"SJAG_03124":null,"SJAG_03312":null,"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aromatic amino acid family biosynthetic process, prephenate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family anabolism, prephenate pathway","type":"exact"},{"name":"aromatic amino acid family biosynthetic process via prephenate","type":"exact"},{"name":"aromatic amino acid family biosynthetic process via prephenate(2-)","type":"exact"},{"name":"aromatic amino acid family formation, prephenate pathway","type":"exact"},{"name":"aromatic amino acid family synthesis, prephenate pathway","type":"exact"}],"termid":"GO:0009095","terms_by_termid":{"GO:0006571":null,"GO:0009094":null}}


id: PBO:0069338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 598, pseudogene","termid":"PBO:0069338"}


id: PBO:0039770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP4 antisense RNA 1","termid":"PBO:0039770"}


id: GO:0050304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 cytochrome c + nitrogen = 2 reduced cytochrome c + nitrous oxide.","definition_xrefs":["MetaCyc:RXN-12130","EC:1.7.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitrous-oxide reductase activity","secondary_identifiers":["KEGG_REACTION:R02804","RHEA:43108"],"synonyms":[{"name":"N2O reductase activity","type":"related"},{"name":"nitrogen:(acceptor) oxidoreductase (N2O-forming)","type":"related"},{"name":"nitrogen:acceptor oxidoreductase (N2O-forming)","type":"related"},{"name":"nitrous oxide reductase activity","type":"related"}],"termid":"GO:0050304"}


id: PBO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5C3A pseudogene 2","termid":"PBO:0061552"}


id: PBO:0049832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 3","termid":"PBO:0049832"}


id: PBO:0012230
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switching","termid":"PBO:0012230"}


id: PBO:0090894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1 Rgf2","termid":"PBO:0090894"}


id: PBO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn6 (predicted)","termid":"PBO:0000642"}


id: GO:1904086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epiboly involved in gastrulation with mouth forming second.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epiboly involved in gastrulation with mouth forming second","termid":"GO:1904086"}


id: PBO:0071827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 22","termid":"PBO:0071827"}


id: MOD:00934
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine hydroxylactam adduct","synonyms":[{"name":"LG-Hlactam-R","type":"related"},{"name":"Levuglandinyl - arginine hydroxylactam adduct","type":"related"}],"termid":"MOD:00934"}


id: PBO:0056556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 4","termid":"PBO:0056556"}


id: GO:0036490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["PMID:16835242","GOC:PARL","PMID:14676213","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"},{"relation_name":"part_of","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036490"}


id: PBO:0081866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 804B","termid":"PBO:0081866"}


id: PBO:0076906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 264, ER-phagy receptor","termid":"PBO:0076906"}


id: PR:O74983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 variant 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme spm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.05c","secondary_identifiers":["UniProtKB:O74983"],"synonyms":[{"name":"Spom972h-UBE2V1","type":"exact"},{"name":"UEV MMS2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme variant MMS2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74983"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: GO:0046972
data:
  {"annotated_genes":["SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95019],"is_not":false,"summary":null,"term":"GO:0046972"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 16) = CoA + histone H4 N6-acetyl-L-lysine (position 16). This reaction represents the addition of an acetyl group to the lysine at position 16 of histone H4.","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0016746","GO:0034212"],"is_obsolete":false,"name":"histone H4K16 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K16 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K16 specific)","type":"exact"},{"name":"histone lysine acetyltransferase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046972","terms_by_termid":{"GO:0046972":null}}


id: GO:0097184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["PMID:16846222","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to azide","termid":"GO:0097184"}


id: PBO:0063757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 2","termid":"PBO:0063757"}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: PBO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-I ortholog Mis6","termid":"PBO:0025431"}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113214],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: GO:0141129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont alters or subverts a host cell surface receptor-mediated signal transduction pathway by binding to and inhibiting the receptor of the pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:10221874","PMID:22714643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host signal transduction pathway via antagonism of host cell surface receptor","synonyms":[{"name":"symbiont-mediated perturbation of host signal transduction pathway via antagonism of host cell surface receptor","type":"broad"}],"termid":"GO:0141129"}


id: PBO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutamate","termid":"PBO:0036015"}


id: SO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 20th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK20_acetylation_site","synonyms":[{"name":"H2BK20 acetylation site","type":"exact"},{"name":"H2BK20ac","type":"exact"}],"termid":"SO:0001942"}


id: GO:0052230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of intracellular transport in other organism involved in symbiotic interaction (obsolete GO:0052230)","synonyms":[{"name":"modulation of intracellular trafficking in other organism","type":"exact"},{"name":"modulation of intracellular transport in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052230"}


id: PBO:0068292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 1","termid":"PBO:0068292"}


id: GO:0019853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-ascorbic acid; L-ascorbic acid ionizes to give L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, which is required as a cofactor in the oxidation of prolyl residues to hydroxyprolyl, and other reactions.","definition_xrefs":["ISBN:0198547684","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-ascorbic acid metabolic process","termid":"GO:0019852"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-ascorbic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-882"],"synonyms":[{"name":"L-ascorbic acid anabolism","type":"exact"},{"name":"L-ascorbic acid biosynthesis","type":"exact"},{"name":"L-ascorbic acid formation","type":"exact"},{"name":"L-ascorbic acid synthesis","type":"exact"},{"name":"ascorbate biosynthesis","type":"exact"},{"name":"ascorbate biosynthetic process","type":"exact"},{"name":"vitamin C biosynthesis","type":"exact"},{"name":"vitamin C biosynthetic process","type":"exact"}],"termid":"GO:0019853"}


id: PBO:0084229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huge dynein-related AAA-type ATPase (midasin); forms extended pre-60S particle with the Rix1 complex; involved with interaction partners Rsa4p and Ytm1p, in the ATP-dependent remodeling of the pre-60S particle at successive maturation steps during ribosomal biogenesis; involved in the removal of biogenesis factors including GTPase Nog2p prior to nuclear export; contains a hexameric AAA-motor head domain and a long flexible tail with a MIDAS (metal ion-dependent adhesion site) domain","termid":"PBO:0084229"}


id: PBO:0065383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 10, pseudogene","termid":"PBO:0065383"}


id: GO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"negative regulation of TLR11 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034172"}


id: PBO:0030009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell","termid":"PBO:0030009"}


id: PR:O94752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enhancer of mRNA-decapping protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13612:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA-decapping protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.11c","secondary_identifiers":["UniProtKB:O94752"],"synonyms":[{"name":"SPBC18E5.11c","type":"related"},{"name":"Spom972h-EDC3","type":"exact"}],"termid":"PR:O94752"}


id: PBO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5 (predicted)","termid":"PBO:0001344"}


id: GO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta2 and gamma1 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-4 complex","synonyms":[{"name":"laminin-221 complex","type":"exact"}],"termid":"GO:0005609"}


id: GO:0046802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an assembled viral particle out of the host cell nucleus by budding and fusion through the nuclear membranes. In this process, enveloped viral particles are formed by budding through the inner nuclear membrane. These perinuclear enveloped particles then fuse with the outer nuclear membrane to deliver a naked capsid into the host cytoplasm.","definition_xrefs":["PMID:21494278","PMID:9765421","VZ:1952","PMID:22858153","PMID:9601512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus by nuclear egress","secondary_identifiers":["GO:0039676"],"synonyms":[{"name":"capsid egress","type":"exact"},{"name":"egress of viral procapsid from host cell nucleus","type":"related"},{"name":"nuclear egress","type":"exact"},{"name":"nuclear egress of viral procapsid","type":"exact"}],"termid":"GO:0046802"}


id: PBO:0057618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-1","termid":"PBO:0057618"}


id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: PBO:0077476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198B (pseudogene)","termid":"PBO:0077476"}


id: PBO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_negative_regulation_of","termid":"PBO:0034103"}


id: PBO:0036539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase Aro2 (predicted)","termid":"PBO:0036539"}


id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: GO:0044041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism carbohydrate catabolic process (obsolete GO:0044041)","synonyms":[{"name":"multi-organism carbohydrate breakdown","type":"exact"},{"name":"multi-organism carbohydrate catabolism","type":"exact"},{"name":"multi-organism carbohydrate degradation","type":"exact"}],"termid":"GO:0044041"}


id: PBO:0027902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript-derived_siRNA_level","termid":"PBO:0027902"}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: GO:0007199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase (GC) activity and a subsequent increase in the concentration of cyclic GMP (cGMP).","definition_xrefs":["GOC:mah","GOC:signaling","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","termid":"GO:0007187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger","synonyms":[{"name":"G protein signaling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cGMP nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via activation of guanylate cyclase activity","type":"exact"},{"name":"GPCR signaling pathway via cGMP second messenger","type":"exact"},{"name":"guanylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0007199"}


id: GO:0043511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with either an inhibin beta-A subunit, to form inhibin A, or an inhibin beta-B subunit, to form inhibin B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"inhibin complex","termid":"GO:0043511"}


id: MOD:01523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01523"}


id: SO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature variant, where the alteration occurs downstream of the transcript termination site.","direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_transcript_variant","synonyms":[{"name":"downstream transcript variant","type":"exact"}],"termid":"SO:0001987"}


id: PBO:0043346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caseinolytic mitochondrial matrix peptidase proteolytic subunit","termid":"PBO:0043346"}


id: PBO:0058459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5188","termid":"PBO:0058459"}


id: PBO:0084470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator of meiosis that is active only during meiotic events; activates transcription of early meiotic genes through interaction with Ume6p; degraded by the 26S proteasome following phosphorylation by Ime2p; transcription is negatively regulated in cis by the IRT1 long noncoding antisense RNA","termid":"PBO:0084470"}


id: FYPO:0008206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished during hypoxic stress.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during hypoxia","termid":"FYPO:0008206"}


id: PBO:0049573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 1","termid":"PBO:0049573"}


id: PBO:0072905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 3","termid":"PBO:0072905"}


id: PBO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family (predicted)","termid":"PBO:0000280"}


id: PBO:0029312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_butyrate","termid":"PBO:0029312"}


id: GO:0016559
data:
  {"annotated_genes":["SJAG_04146","SJAG_04732","SJAG_02384","SJAG_02848","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88276,95310,96008,98813,107259],"is_not":false,"summary":null,"term":"GO:0016559"}]},"cv_name":"biological_process","definition":"The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments.","definition_xrefs":["GOC:mah","PMID:11687502","PMID:14754507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"},{"relation_name":"part_of","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02788":null,"SJAG_02848":null,"SJAG_04146":null,"SJAG_04732":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"peroxisome fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome division","type":"exact"},{"name":"peroxisome proliferation","type":"exact"}],"termid":"GO:0016559","terms_by_termid":{"GO:0016559":null}}


id: FYPO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[115496,115467,115482,115493,115488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased resistance to chemical","termid":"FYPO:0002682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"increased resistance to chemical during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_01787"],"single_locus_genotype_uniquenames":["pmk1delta","pck2delta","pck1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased resistance to chemical during mitotic cell cycle","type":"related"},{"name":"resistance to chemicals: increased during vegetative growth","type":"exact"},{"name":"resistant to chemical during vegetative growth","type":"exact"}],"termid":"FYPO:0000126","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute behavioral change resulting from a perceived external threat.","definition_xrefs":["PMID:9920659","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral fear response","synonyms":[{"name":"behavioural fear response","type":"exact"}],"termid":"GO:0001662"}


id: GO:0140743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of lncRNA transcription","termid":"GO:0140743"}


id: PBO:0026705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tryptophan_level","termid":"PBO:0026705"}


id: GO:0031381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A virus-specific protein complex that possesses RNA-dependent RNA polymerase activity and replicates the genome of an RNA virus.","definition_xrefs":["PMID:15574411","GOC:mah","PMID:15613301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-directed RNA polymerase complex","termid":"GO:0031379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"viral RNA-directed RNA polymerase complex","termid":"GO:0031381"}


id: PATO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorganized","termid":"PATO:0000937"}


id: MOD:01799
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to a methylated serine, such as N-methylserine, N,N-dimethylserine, or N,N,N-trimethylserine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated serine","synonyms":[{"name":"MeSer","type":"exact"}],"termid":"MOD:01799"}


id: PBO:0039289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG3 pseudogene 1","termid":"PBO:0039289"}


id: PBO:0040805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase","termid":"PBO:0040805"}


id: PBO:0060232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker like 2","termid":"PBO:0060232"}


id: PBO:0091474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase, implicated in vitamin metabolism, or cellular detoxification","termid":"PBO:0091474"}


id: PBO:0004337
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-consensus GC donor","termid":"PBO:0004337"}


id: PBO:0027443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-UGA_suppression","termid":"PBO:0027443"}


id: PBO:0051877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isochorismatase domain containing 2","termid":"PBO:0051877"}


id: PBO:0070150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 64 pseudogene","termid":"PBO:0070150"}


id: PBO:0077630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 2","termid":"PBO:0077630"}


id: FYPO:0001009
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115356,115579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring.","definition_xrefs":["PMID:19713940","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation","type":"related"},{"name":"abolished contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic ring assembly","type":"related"},{"name":"abolished cytokinetic ring formation","type":"related"},{"name":"abolished mitotic contractile ring assembly","type":"exact"},{"name":"actomyosin contractile ring assembly abolished","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent","type":"related"}],"termid":"FYPO:0001009","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:2000987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"positive regulation of fear response","termid":"GO:1903367"},{"relation_name":"is_a","term_name":"regulation of behavioral fear response","termid":"GO:2000822"},{"relation_name":"positively_regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of behavioral fear response","synonyms":[{"name":"positive regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000987"}


id: PBO:0005675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor SpEAF","termid":"PBO:0005675"}


id: SO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA typically derived from intronic sequence of the sense strand of a cognate host gene, that is not rapidly degraded. It may contain exonic sequences, 5′ caps, and/or polyA tails.","definition_xrefs":["PMID:29397203","PMID:27147469","PMID:30391089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sisRNA","synonyms":[{"name":"Stable intronic sequence RNA","type":"exact"},{"name":"stable_intronic_sequence_RNA","type":"exact"}],"termid":"SO:0002352"}


id: PBO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oleoyl-CoA_ligase_activity","termid":"PBO:0030323"}


id: PBO:0036476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor","termid":"PBO:0036476"}


id: SO:1000011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a cytidine to a thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_T_transition","synonyms":[{"name":"C to T transition","type":"exact"}],"termid":"SO:1000011"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["RESID:AA0374","Unimod:448#C-term","PubMed:15102848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: PBO:0110347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5RAP3 pseudogene 1","termid":"PBO:0110347"}


id: PBO:0017712
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF2","termid":"PBO:0017712"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: PBO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member F, pseudogene","termid":"PBO:0047077"}


id: GO:0000137
data:
  {"annotated_genes":["SJAG_04770","SJAG_03555","SJAG_01025","SJAG_04095","SJAG_01276","SJAG_04112","SJAG_00816"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92116,112974],"is_not":false,"summary":null,"term":"GO:0000137"},{"annotations":[108720],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[114030,93952,100974,83617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_03555":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi cis cisterna","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi apparatus cis cisterna","type":"exact"}],"termid":"GO:0000137","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0140497":null}}


id: PBO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute inhibitor protein 1","termid":"PBO:0014577"}


id: FYPO:0000722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acidic pH. Cells stop growing (and may die) at a pH that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to acidity","synonyms":[{"name":"acid pH resistance: decreased","type":"related"},{"name":"decreased growth during cellular response to acidity","type":"exact"},{"name":"decreased growth on acidic medium","type":"related"},{"name":"decreased vegetative cell population growth during cellular response to acidity","type":"exact"},{"name":"hypersensitive to acidity","type":"exact"},{"name":"sensitive to acidity during mitotic cell cycle","type":"related"},{"name":"sensitive to acidity during vegetative growth","type":"exact"}],"termid":"FYPO:0000722"}


id: PBO:0029144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029144"}


id: PR:Q09925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13693:SF3","OMA:SCHPO01765","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.08","secondary_identifiers":["UniProtKB:Q09925"],"synonyms":[{"name":"SPT 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC2","type":"exact"},{"name":"long chain base biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09925"}


id: GO:0033576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in the cytosol.","definition_xrefs":["GOC:mah","GOC:pr","PMID:12042244"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in cytosol (obsolete GO:0033576)","synonyms":[{"name":"protein amino acid glycosylation in cytosol","type":"exact"}],"termid":"GO:0033576"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["UniProtKB:Q9USH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["RHEA:21296","MetaCyc:GALACTODEHYDROG-RXN"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: PBO:0027819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_pyrimidine_salvage_gene_mRNA_during_vegetative_growth","termid":"PBO:0027819"}


id: PBO:0074220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 4","termid":"PBO:0074220"}


id: GO:1901884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxycoumarin.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"4-hydroxycoumarin biosynthetic process","synonyms":[{"name":"4-hydroxycoumarin anabolism","type":"exact"},{"name":"4-hydroxycoumarin biosynthesis","type":"exact"},{"name":"4-hydroxycoumarin formation","type":"exact"},{"name":"4-hydroxycoumarin synthesis","type":"exact"}],"termid":"GO:1901884"}


id: GO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"},{"relation_name":"is_a","term_name":"nitrate import","termid":"GO:1902025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nitrate transmembrane transport","secondary_identifiers":["GO:0006872","GO:0080055"],"synonyms":[{"name":"low affinity nitrate transport","type":"narrow"},{"name":"low-affinity nitrate transport","type":"narrow"},{"name":"nitrate transport","type":"broad"}],"termid":"GO:0015706"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: PBO:0085629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress by acting along with Nfu1p at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to mitochondrial client proteins like lipoate synthase and succinate dehydrogenase; sequence similarity to human BOLA family member, BOLA3, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS2)","termid":"PBO:0085629"}


id: SO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small nucleolar RNAs (snoRNAs) are short non-coding RNAs enriched in the nucleolus as components of small nucleolar ribonucleoproteins. They guide ribose methylation and pseudouridylation of rRNAs and snRNAs, and a subgroup regulate excision of rRNAs from rRNA precursor transcripts. snoRNAs may also guide rRNA acetylation and tRNA methylation, and regulate mRNA abundance and alternative splicing.","definition_xrefs":["PMID:31828325","GOC:kgc"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:snoRNA","type":"exact"},{"name":"small nucleolar RNA","type":"exact"}],"termid":"SO:0000275"}


id: PBO:0077858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM2 pseudogene 1","termid":"PBO:0077858"}


id: GO:0019707
data:
  {"annotated_genes":["SJAG_04451","SJAG_01112","SJAG_00895","SJAG_01299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91964,99156,106171,104304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a sulfur atom on the cysteine of a protein molecule.","definition_xrefs":["GOC:ai","RHEA:63372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019707","terms_by_termid":{"GO:0019706":null}}


id: GO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardioblast proliferation in the second heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating. The secondary heart field is the region of the heart that will form the majority of the mesodermal component of the right ventricle, the arterial pole (outflow tract) and the venous pole (inflow tract).","definition_xrefs":["GOC:mtg_heart","GOC:rl","PMID:17276708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"regulation of SHF cardioblast proliferation","type":"exact"},{"name":"regulation of second heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003266"}


id: GO:0048471
data:
  {"annotated_genes":["SJAG_01785","SJAG_04059","SJAG_01422","SJAG_01329","SJAG_03609","SJAG_03162","SJAG_04049","SJAG_04400","SJAG_00790","SJAG_03943","SJAG_01722","SJAG_02723","SJAG_02532","SJAG_01664","SJAG_03145","SJAG_00825","SJAG_04583","SJAG_03281","SJAG_02683","SJAG_01227","SJAG_04883","SJAG_00355","SJAG_03750","SJAG_04578","SJAG_01527","SJAG_00784"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89227,92612,96756,102664,105084],"is_not":false,"summary":null,"term":"GO:0048471"},{"annotations":[103417,84874,109944,104224,110417,90310,84588,106480,89734,108081,110200,114856,105933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097038"},{"annotations":[89159],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[94714,96646,102348,111605,90785,93868,83490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"Cytoplasm situated near, or occurring around, the nucleus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01527":null,"SJAG_01664":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_02683":null,"SJAG_02723":null,"SJAG_03145":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04400":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"perinuclear region of cytoplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048471","terms_by_termid":{"GO:0048471":null,"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: GO:0043459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a single or short exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to short exposure to lithium ion (obsolete GO:0043459)","synonyms":[{"name":"response to short exposure to lithium ion","type":"exact"}],"termid":"GO:0043459"}


id: PBO:0025509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Ucp3","termid":"PBO:0025509"}


id: SO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation, where it increases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_induced","termid":"SO:0000125"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_autoregulated","synonyms":[{"name":"positively autoregulated","type":"exact"}],"termid":"SO:0000475"}


id: PBO:0055508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2942","termid":"PBO:0055508"}


id: GO:0050224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-prunasin + H2O = D-glucose + mandelonitrile.","definition_xrefs":["EC:3.2.1.118","RHEA:16489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"prunasin beta-glucosidase activity","secondary_identifiers":["MetaCyc:PRUNASIN-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R02558"],"synonyms":[{"name":"prunasin b-glucosidase activity","type":"exact"},{"name":"prunasin beta-D-glucohydrolase activity","type":"related"},{"name":"prunasin hydrolase activity","type":"related"}],"termid":"GO:0050224"}


id: PBO:0050680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 7","termid":"PBO:0050680"}


id: GO:1905415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf","PMID:18468511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion-dependent exocytosis","termid":"GO:0045956"},{"relation_name":"is_a","term_name":"regulation of dense core granule exocytosis","termid":"GO:1905413"},{"relation_name":"positively_regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of dense core granule exocytosis","synonyms":[{"name":"activation of dense core granule exocytosis","type":"narrow"},{"name":"activation of dense core vesicle exocytosis","type":"narrow"},{"name":"positive regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up regulation of dense core granule exocytosis","type":"exact"},{"name":"up regulation of dense core vesicle exocytosis","type":"exact"},{"name":"up-regulation of dense core granule exocytosis","type":"exact"},{"name":"up-regulation of dense core vesicle exocytosis","type":"exact"},{"name":"upregulation of dense core granule exocytosis","type":"exact"},{"name":"upregulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905415"}


id: PBO:0068514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 105, pseudogene","termid":"PBO:0068514"}


id: PBO:0058254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4632","termid":"PBO:0058254"}


id: PBO:0083285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified genes STE18 and ECM2","termid":"PBO:0083285"}


id: GO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-serine to form peptidyl-O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine sulfation","termid":"GO:0050984"}


id: GO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"}],"termid":"GO:0002588"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-199219","Reactome:R-HSA-429581","Reactome:R-HSA-199206"],"termid":"GO:0008523"}


id: GO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During sexual reproduction, the creation of a single nucleus from two nuclei as a result of fusing the nuclear envelopes that surround each nuclei. This takes place following the mutual exchange of one of the two nuclei produced by the mitosis that follows the second meiotic nuclear division. This occurs in ciliated protozoans such as Tetrahymena.","definition_xrefs":["GOC:pg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"karyogamy involved in conjugation with mutual genetic exchange","synonyms":[{"name":"karyogamy involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000744"}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: SO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000762 PAC_clone (obsolete SO:0000762)","synonyms":[{"name":"P1_clone","type":"related"}],"termid":"SO:0000762"}


id: PBO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 11","termid":"PBO:0060064"}


id: PBO:0060344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IXB","termid":"PBO:0060344"}


id: GO:0018447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chloral hydrate dehydrogenase activity (obsolete GO:0018447)","termid":"GO:0018447"}


id: GO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"negatively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nervous system development","synonyms":[{"name":"down regulation of nervous system development","type":"exact"},{"name":"down-regulation of nervous system development","type":"exact"},{"name":"downregulation of nervous system development","type":"exact"},{"name":"inhibition of nervous system development","type":"narrow"}],"termid":"GO:0051961"}


id: GO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiocyanate, any anion of thiocyanic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiocyanate metabolic process","termid":"GO:0018969"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"thiocyanate catabolic process","synonyms":[{"name":"thiocyanate breakdown","type":"exact"},{"name":"thiocyanate catabolism","type":"exact"},{"name":"thiocyanate degradation","type":"exact"}],"termid":"GO:0046265"}


id: PBO:0085519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21A has a paralog, RPS21B, that arose from the whole genome duplication","termid":"PBO:0085519"}


id: SO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The central, hydrophobic region of the signal peptide (approx 7-15 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"central_hydrophobic_region_of_signal_peptide","synonyms":[{"name":"H-region","type":"related"},{"name":"central hydrophobic region of signal peptide","type":"exact"},{"name":"central_hydrophobic_region","type":"related"}],"termid":"SO:0100016"}


id: PBO:0076065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG2 antisense RNA 1","termid":"PBO:0076065"}


id: MOD:01395
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an isoleucine residue, a threonine residue and the quinaldate compound 2-carboxy-4-(1-hydroxyethyl)--7,8-dihydroquinolin-8-ol.","definition_xrefs":["PubMed:11320328","RESID:AA0472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinaldate modified residue","termid":"MOD:01424"},{"relation_name":"is_a","term_name":"crosslinked L-isoleucine residue","termid":"MOD:02049"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(1-hydroxyethyl)-7-isoleucino-2-(threonin-O3-ylcarbonyl)-7,8-dihydroquinolin-8-ol","synonyms":[{"name":"(7R,8S)-7-[(1S,2S)-1-carboxy-2-methylbutyl]amino-2-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)carbonyl-8-hydroxy-4-[(1S)-1-hydroxyethyl]-7,8-dihydroquinoline","type":"exact"},{"name":"4-(1-hydroxyethyl)-7-isoleucino-2-(threonin-O3-ylcarbonyl)-7,8-dihydroquinolin-8-ol","type":"exact"},{"name":"BINDING 4-(1-hydroxyethyl)-7,8-dihydroquinolin-8-ol (covalent; via 2 links)","type":"exact"}],"termid":"MOD:01395"}


id: SO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of nucleotides or amino acids which, by design, has a \\\"random\\\" order of components, given a predetermined input frequency of these components.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synthetic_sequence","termid":"SO:0000351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random_sequence","synonyms":[{"name":"random sequence","type":"exact"}],"termid":"SO:0000449"}


id: GO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of a non-coding RNA (ncRNA) molecule. In eukaryotes, substrates include nuclear non-coding RNAs such as precursors and a variety of incorrectly processed forms of snRNAs, snoRNAs, rRNAs, and tRNAs, as well as discarded RNA fragments which have been removed from ncRNA primary transcripts. Polyadenylation of precursors is often linked to termination of transcription, but polyadenylation of RNAs targeted for degradation may also occur post-transcriptionally. This polyadenylation is important both for 3'-end processing to produce mature ncRNA species and also for targeting incorrectly processed or discarded RNA molecules for degradation.","definition_xrefs":["GOC:rn","PMID:15935758","PMID:16374505","PMID:16431988","GOC:dgf","PMID:15828860","PMID:18951092","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation (obsolete GO:0043629)","synonyms":[{"name":"non-coding RNA polyadenylation","type":"exact"}],"termid":"GO:0043629"}


id: PBO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab Escort Protein","termid":"PBO:0003971"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["GO:0006892","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: GO:0032966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of collagen metabolic process","termid":"GO:0010713"},{"relation_name":"is_a","term_name":"regulation of collagen biosynthetic process","termid":"GO:0032965"},{"relation_name":"negatively_regulates","term_name":"collagen biosynthetic process","termid":"GO:0032964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen biosynthetic process","synonyms":[{"name":"negative regulation of collagen anabolism","type":"exact"},{"name":"negative regulation of collagen biosynthesis","type":"exact"},{"name":"negative regulation of collagen formation","type":"exact"},{"name":"negative regulation of collagen synthesis","type":"exact"}],"termid":"GO:0032966"}


id: PBO:0070449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 6","termid":"PBO:0070449"}


id: MOD:01970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl glutamic acid, forming an isopeptide bond with a free glutamic acid.","definition_xrefs":["PubMed:10747868","RESID:AA0612","PubMed:23434852","Unimod:450","PubMed:1680872","PubMed:15525938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl glutamic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanedioic acid","type":"exact"},{"name":"(2S)-2-[(4S)-4-amino-4-carboxybutanamido]pentanedioic acid","type":"exact"},{"name":"2-([4-azanyl-4-carboxybutanoyl]azanyl)pentanedioic acid","type":"exact"},{"name":"5-glutamyl glutamic acid","type":"exact"},{"name":"Glu","type":"related"},{"name":"MOD_RES 5-glutamyl glutamate","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"N-(gamma-L-glutamyl)-L-glutamic acid","type":"exact"},{"name":"gamma-glutamylglutamate","type":"exact"},{"name":"isoglutamyl glutamic acid","type":"exact"},{"name":"isoglutamyl monoglutamic acid","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:01970"}


id: PBO:0079596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E1 antisense RNA 1","termid":"PBO:0079596"}


id: GO:0003414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte that will contribute to bone development are generated and organized.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocyte morphogenesis","termid":"GO:0090171"},{"relation_name":"part_of","term_name":"chondrocyte development involved in endochondral bone morphogenesis","termid":"GO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis involved in endochondral bone morphogenesis","termid":"GO:0003414"}


id: PBO:0087636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the endosomal Vps27p-Hse1p complex; complex is required for sorting of ubiquitinated membrane proteins into intralumenal vesicles prior to vacuolar degradation, as well as for recycling of Golgi proteins and formation of lumenal membranes","termid":"PBO:0087636"}


id: PBO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 17 (pseudogene)","termid":"PBO:0044728"}


id: PBO:0087573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; involved in transcription initiation, similar to 34 kDa subunit of human TFIIH; interacts with Ssl1p","termid":"PBO:0087573"}


id: MOD:00848
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a particular compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent derivatized residue","termid":"MOD:00848"}


id: GO:0009366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex usually composed of four proteins, EntB, EntD, EntE and EntF. Plays a role in the enterobactin biosynthesis pathway.","definition_xrefs":["PMID:9485415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"enterobactin synthetase complex","secondary_identifiers":["MetaCyc:ENTMULTI-CPLX"],"synonyms":[{"name":"enterochelin synthetase complex","type":"exact"}],"termid":"GO:0009366"}


id: PBO:0068290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease L","termid":"PBO:0068290"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: GO:2000204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal subunit export from nucleus","termid":"GO:2000201"},{"relation_name":"is_a","term_name":"regulation of ribosomal large subunit export from nucleus","termid":"GO:2000203"},{"relation_name":"negatively_regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"negative regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"negative regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000204"}


id: PBO:0063680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 4","termid":"PBO:0063680"}


id: PBO:0045911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 7","termid":"PBO:0045911"}


id: GO:0032488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Cdc42 subfamily relays a signal.","definition_xrefs":["GOC:mah","PMID:18558478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Cdc42 protein signal transduction","synonyms":[{"name":"Cdc42 signaling","type":"related"},{"name":"Cdc42 signaling pathway","type":"related"},{"name":"cdc42 signalling pathway","type":"related"}],"termid":"GO:0032488"}


id: GO:0051213
data:
  {"annotated_genes":["SJAG_03041","SJAG_03664","SJAG_00221","SJAG_04297","SJAG_00519","SJAG_05265","SJAG_00642","SJAG_00309","SJAG_02401","SJAG_03225","SJAG_03286","SJAG_04580","SJAG_01465","SJAG_03635","SJAG_03997","SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100774],"is_not":false,"summary":null,"term":"GO:0051213"},{"annotations":[90758,97272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016706"},{"annotations":[108453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[108454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[113360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097641"},{"annotations":[85933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"},{"annotations":[83510,108255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83512,92721,109087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[99281,90154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[90875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[107738,107739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[99143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which both atoms of oxygen from one molecule of O2 are incorporated into the (reduced) product(s) of the reaction. The two atoms of oxygen may be distributed between two different products.","definition_xrefs":["DOI:10.1016/S0040-4020(03)00944-X","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00519":null,"SJAG_00642":null,"SJAG_00892":null,"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03225":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null,"SJAG_04297":null,"SJAG_04580":null,"SJAG_05265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-112124","Reactome:R-HSA-112125","Reactome:R-HSA-112121","Reactome:R-HSA-112120"],"termid":"GO:0051213","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016706":null,"GO:0031543":null,"GO:0034647":null,"GO:0051213":null,"GO:0051864":null,"GO:0097641":null,"GO:0102672":null,"GO:0106156":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: GO:0044177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi apparatus","synonyms":[{"name":"host Golgi apparatus","type":"exact"}],"termid":"GO:0044177"}


id: PBO:0042622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal type homeobox 2","termid":"PBO:0042622"}


id: GO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic spindle organization process by which a mitotic spindle becomes asymmetric either in position or structure.","definition_xrefs":["PMID:26659188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle asymmetry","termid":"GO:0061867"}


id: PBO:0050719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 5","termid":"PBO:0050719"}


id: GO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 1 metabotropic glutamate receptor binding","synonyms":[{"name":"type 1 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031798"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: PBO:0061476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRDE-2, necessary for RNA interference, domain containing","termid":"PBO:0061476"}


id: PATO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition to progress, invade surrounding tissues or metastasize.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, malignant","termid":"PATO:0002097"}


id: PBO:0086944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for a factor pheromone; couples to MAP kinase cascade to mediate pheromone response; transcribed in alpha cells and required for mating by alpha cells, ligand bound receptors endocytosed and recycled to the plasma membrane; GPCR","termid":"PBO:0086944"}


id: PR:Q9US07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00696","PANTHER:PTHR11937:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.02c","secondary_identifiers":["UniProtKB:Q9US07"],"synonyms":[{"name":"Spom972h-ACTR8","type":"exact"}],"termid":"PR:Q9US07"}


id: SO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An open reading frame found within the 5' UTR that can be translated and stall the translation of the downstream open reading frame.","definition_xrefs":["PMID:12890013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"five_prime_UTR","termid":"SO:0000204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_open_reading_frame","synonyms":[{"name":"five prime open reading frame","type":"exact"}],"termid":"SO:0000629"}


id: PBO:0078717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 2-1","termid":"PBO:0078717"}


id: PBO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_modification","termid":"PBO:0030440"}


id: PBO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH2 divergent transcript","termid":"PBO:0050872"}


id: PATO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000765 absolute consumption value (obsolete PATO:0000765)","termid":"PATO:0000765"}


id: GO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"negatively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"negative regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034128"}


id: GO:0061615
data:
  {"annotated_genes":["SJAG_02945","SJAG_02369","SJAG_02135","SJAG_04495","SJAG_03903","SJAG_04192","SJAG_06621","SJAG_03828","SJAG_00461","SJAG_00605","SJAG_00027","SJAG_04334","SJAG_02107","SJAG_00839","SJAG_06622","SJAG_03373","SJAG_02796","SJAG_02009","SJAG_01310","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90594,101484,104949,99692,112367,94331,105412,94062,99436,101847,100504,104950,104951,101483,105413,105414,105415,105410,91083,105416,104947,104946,105411,101485,101848,104948,104952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a monosaccharide into pyruvate, occurring through a fructose-6-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["ISBN:0879010479","GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0055086","GO:0005975","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycolytic process through fructose-6-phosphate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5484"],"synonyms":[{"name":"glycolysis through fructose-6-phosphate","type":"exact"}],"termid":"GO:0061615","terms_by_termid":{"GO:0061621":null}}


id: FYPO:0002399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton","synonyms":[{"name":"abnormal microtubule cytoskeleton physical object quality","type":"exact"},{"name":"disorganized microtubule cytoskeleton","type":"related"}],"termid":"FYPO:0002399"}


id: PBO:0054112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1477","termid":"PBO:0054112"}


id: PBO:0090446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exopolyphosphatase, prune Ppx1","termid":"PBO:0090446"}


id: GO:0007077
data:
  {"annotated_genes":["SJAG_04578","SJAG_00840","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106482],"is_not":false,"summary":null,"term":"GO:0007077"},{"annotations":[99715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[99718,89906],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process in which the controlled partial or complete breakdown of the nuclear membranes during occurs during mitosis.","definition_xrefs":["GOC:bf","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane disassembly","termid":"GO:0051081"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NEB","type":"broad"},{"name":"local NEB","type":"broad"},{"name":"mitotic nuclear envelope breakdown","type":"exact"},{"name":"mitotic nuclear envelope catabolism","type":"related"},{"name":"mitotic nuclear envelope degradation","type":"related"},{"name":"mitotic nuclear envelope disassembly","type":"related"},{"name":"nuclear envelope breakdown","type":"broad"}],"termid":"GO:0007077","terms_by_termid":{"GO:0007077":null,"GO:0140516":null,"GO:1905557":null}}


id: PBO:0063978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 12","termid":"PBO:0063978"}


id: PR:Q9UTE0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sey1 gene.","definition_xrefs":["UniProtKB:Q9UTE0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sey1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.14c","synonyms":[{"name":"Spom972h-sey1","type":"exact"}],"termid":"PR:Q9UTE0"}


id: PATO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000269 relative visual threshold (obsolete PATO:0000269)","termid":"PATO:0000269"}


id: PBO:0038349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kleptoparasite_of","termid":"PBO:0038349"}


id: GO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a nuclear pore.","definition_xrefs":["GOC:tb","GOC:rb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nuclear envelope","termid":"GO:0090435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nuclear pore","synonyms":[{"name":"protein localisation to nuclear pore","type":"exact"}],"termid":"GO:0090204"}


id: PBO:0029891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0029891"}


id: PBO:0027602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_secondary_cell_septum_thickness","termid":"PBO:0027602"}


id: GO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Golgi reassembly","synonyms":[{"name":"Golgi apparatus reassembly","type":"exact"}],"termid":"GO:0090168"}


id: GO:1900213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","GOC:mtg_apoptosis","PMID:17314325","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900211"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process","termid":"GO:2001055"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"activation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"},{"name":"positive regulation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"},{"name":"up regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"up-regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"upregulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"}],"termid":"GO:1900213"}


id: PBO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_homologous_chromosome_segregation","termid":"PBO:0031542"}


id: PBO:0083033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 1-pyrroline-5-carboxylate reductase; catalyzes the last step in proline biosynthesis","termid":"PBO:0083033"}


id: GO:1905788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"negatively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"down regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"down-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"down-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"down-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"down-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"downregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"downregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"downregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"downregulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"inhibition of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"inhibition of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"inhibition of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"inhibition of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"inhibition of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"negative regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"negative regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"negative regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"negative regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905788"}


id: GO:0097174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["GOC:yaf","PMID:15901686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid metabolism","type":"exact"}],"termid":"GO:0097174"}


id: PBO:0038604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase 1","termid":"PBO:0038604"}


id: PBO:0065064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 2, pro eosinophil major basic protein","termid":"PBO:0065064"}


id: GO:0031139
data:
  {"annotated_genes":["SJAG_04682","SJAG_03067","SJAG_04206","SJAG_03346","SJAG_00975","SJAG_00600","SJAG_01345","SJAG_02233","SJAG_02730","SJAG_00993","SJAG_00256","SJAG_02380","SJAG_03453","SJAG_00117","SJAG_05000","SJAG_03802","SJAG_00664","SJAG_03501","SJAG_00210","SJAG_04009","SJAG_02444","SJAG_06638","SJAG_02785","SJAG_05153","SJAG_02592","SJAG_01718","SJAG_00526","SJAG_01113","SJAG_01509","SJAG_01254","SJAG_02723","SJAG_01084","SJAG_00781","SJAG_00990","SJAG_03309","SJAG_02379","SJAG_03623","SJAG_03081","SJAG_03340","SJAG_03735","SJAG_00472","SJAG_01311","SJAG_02066","SJAG_03486","SJAG_01978","SJAG_01699","SJAG_02923","SJAG_04813","SJAG_00514","SJAG_04026","SJAG_02266","SJAG_02472","SJAG_04312","SJAG_01794","SJAG_02773","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84257,86932,94617,95496,96173,97806,100939,103161,107394,112291],"is_not":false,"summary":null,"term":"GO:0031139"},{"annotations":[94484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[111588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[103073,111589,112498,115060,115061,112156,114208,85311,95549,84143,102298,104824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[84319,90298,97895,90439,112084,88992,105035,96587,101928,101835,111535,102514,87487,102670,110482,102866,100536],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[89385],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[92442,93112,89386,85331,88259,102299],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[103160,84256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[99416,97434,104825,112292,115065,96544,100482,95550,83970,103075,104595,115064],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1900237"},{"annotations":[89543,85968,84010,107386,86933],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[86938,111591,107387,102401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that increases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04509":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of conjugation with cellular fusion","type":"narrow"},{"name":"stimulation of conjugation with cellular fusion","type":"narrow"},{"name":"up regulation of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of conjugation with cellular fusion","type":"exact"}],"termid":"GO:0031139","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0071507":null,"GO:0090029":null,"GO:1900237":null,"GO:1902917":null}}


id: PBO:0038469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 8","termid":"PBO:0038469"}


id: GO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + H+(in) = monoatomic cation(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoatomic cation:proton antiporter activity (obsolete GO:0005451)","synonyms":[{"name":"monovalent cation:hydrogen antiporter activity","type":"exact"},{"name":"monovalent cation:proton antiporter activity","type":"related"}],"termid":"GO:0005451"}


id: PR:Q9UT20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-oxo-5-alpha-steroid 4-dehydrogenase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00594","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.08c","secondary_identifiers":["UniProtKB:Q9UT20"],"synonyms":[{"name":"Spom972h-SRD5A1","type":"exact"}],"termid":"PR:Q9UT20"}


id: GO:0061346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph","PMID:16860783","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway involved in heart development","termid":"GO:0061341"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"}


id: PBO:0055845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat, Ig-like and transmembrane domains 1","termid":"PBO:0055845"}


id: PBO:0068117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 424","termid":"PBO:0068117"}


id: PBO:0042985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline dehydrogenase","termid":"PBO:0042985"}


id: PBO:0086418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; member of the Obg family; peripheral protein of the mitochondrial inner membrane that associates with the large ribosomal subunit; required for mitochondrial translation, possibly via a role in ribosome assembly","termid":"PBO:0086418"}


id: GO:0071167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex from the cytoplasm to the nucleus.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonucleoprotein complex import into nucleus (obsolete GO:0071167)","synonyms":[{"name":"RNP import into nucleus","type":"exact"},{"name":"ribonucleoprotein complex import into cell nucleus","type":"exact"},{"name":"ribonucleoprotein complex nucleus import","type":"exact"},{"name":"ribonucleoprotein complex targeting to nucleus","type":"exact"},{"name":"ribonucleoprotein complex transport from cytoplasm to nucleus","type":"exact"},{"name":"ribonucleoprotein import into nucleus","type":"exact"}],"termid":"GO:0071167"}


id: PBO:0066572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group CcEe antigens","termid":"PBO:0066572"}


id: FYPO:0005088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that contains two nuclei and one or more septa, and undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15829570","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, binucleate septated cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, binucleate septated cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, binucleate septated cell","type":"exact"}],"termid":"FYPO:0005088"}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: PBO:0090066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP binding protein Sgt1","termid":"PBO:0090066"}


id: SO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tyrosine anticodon, and a 3' tyrosine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tyrosine_tRNA_primary_transcript","termid":"SO:0000229"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl_tRNA","synonyms":[{"name":"tyrosyl tRNA","type":"exact"},{"name":"tyrosyl-transfer RNA","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000272"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: GO:0003225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac left ventricular trabecular myocardium are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular cardiac muscle tissue morphogenesis","termid":"GO:0003220"},{"relation_name":"is_a","term_name":"ventricular trabecula myocardium morphogenesis","termid":"GO:0003222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left ventricular trabecular myocardium morphogenesis","termid":"GO:0003225"}


id: PBO:0091184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf281","termid":"PBO:0091184"}


id: PBO:0026637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromeric_chromatin_during_vegetative_growth","termid":"PBO:0026637"}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: GO:0051694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a protein or protein complex to the pointed (or minus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits.","definition_xrefs":["ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament capping","termid":"GO:0051693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0065003","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"pointed-end actin filament capping","synonyms":[{"name":"minus-end F-actin capping activity","type":"exact"},{"name":"minus-end actin filament capping activity","type":"exact"},{"name":"pointed-end F-actin capping activity","type":"exact"},{"name":"pointed-end actin capping activity","type":"exact"}],"termid":"GO:0051694"}


id: GO:0002060
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to a purine nucleobase, an organic nitrogenous base with a purine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine nucleobase binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine base binding","type":"exact"},{"name":"purine binding","type":"related"}],"termid":"GO:0002060","terms_by_termid":{"GO:0002055":null}}


id: PBO:0065722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP1 homolog, endonuclein","termid":"PBO:0065722"}


id: PBO:0089960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex telomere binding subunit Rap1","termid":"PBO:0089960"}


id: PBO:0066531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 6","termid":"PBO:0066531"}


id: SO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A lncRNA transcript containing a retained intron.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_primary_transcript","termid":"SO:0002035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_with_retained_intron","synonyms":[{"name":"lncRNA with retained intron","type":"exact"},{"name":"lncRNA_retained_intron","type":"exact"}],"termid":"SO:0002113"}


id: PBO:0040076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARRDC3 antisense RNA 1","termid":"PBO:0040076"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: GO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the myocardium bends along a linear axis and contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myocardial epithelial involution involved in heart jogging","termid":"GO:0003304"}


id: PBO:0089466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","termid":"PBO:0089466"}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: MOD:00133
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamine residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoglutamyl)-L-lysine and the release of ammonia.","definition_xrefs":["ChEBI:21863","PubMed:8598899","DeltaMass:0","PubMed:5637041","PubMed:2461365","PubMed:5656070","RESID:AA0124#GLN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N6-(L-isoglutamyl)-L-lysine","termid":"MOD:01630"},{"relation_name":"is_a","term_name":"crosslinked L-glutamine residue","termid":"MOD:02046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine (Gln)","synonyms":[{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoglutamyl lysine isopeptide (Lys-Gln)","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-5Glu(Gln)","type":"exact"}],"termid":"MOD:00133"}


id: PR:Q9P381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13A2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.03","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-DG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC13A2.03","type":"exact"}],"termid":"PR:Q9P381"}


id: PBO:0091361
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human NRAS","termid":"PBO:0091361"}


id: PBO:0065253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20F, pseudogene","termid":"PBO:0065253"}


id: PBO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 3","termid":"PBO:0061010"}


id: GO:0106212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres dissociate from the spindle pole body, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["GOC:mah","PMID:27611693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromere detachment from spindle pole body involved in meiotic chromosome organization","synonyms":[{"name":"centromere detachment from SPB involved in meiotic chromosome organization","type":"exact"},{"name":"centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106212"}


id: GO:2000406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte migration","termid":"GO:2000403"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"positively_regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell migration","synonyms":[{"name":"positive regulation of T lymphocyte migration","type":"exact"},{"name":"positive regulation of T-cell migration","type":"exact"},{"name":"positive regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000406"}


id: PBO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0030238"}


id: GO:0002941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of type B synoviocytes by cell division, resulting in the expansion of their population. A type B synoviocyte is a fibroblast-like cell found in synovial tissues.","definition_xrefs":["PMID:10770586","PMID:9546370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synoviocyte proliferation","termid":"GO:0002941"}


id: GO:1903028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of opsonization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22333221","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of opsonization","termid":"GO:1903027"},{"relation_name":"positively_regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of opsonization","synonyms":[{"name":"activation of opsonization","type":"narrow"},{"name":"up regulation of opsonization","type":"exact"},{"name":"up-regulation of opsonization","type":"exact"},{"name":"upregulation of opsonization","type":"exact"}],"termid":"GO:1903028"}


id: PBO:0087704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; affects transcription by acting as target of activators and repressors; forms part of the tail domain of mediator","termid":"PBO:0087704"}


id: PR:Q8TFF9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fah1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase PB8B6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB8B6.03","synonyms":[{"name":"Spom972h-fah1","type":"exact"}],"termid":"PR:Q8TFF9"}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_00881","SJAG_03152","SJAG_02290","SJAG_03102","SJAG_04305","SJAG_00395","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97939,107111],"is_not":false,"summary":null,"term":"GO:0009092"},{"annotations":[107989,102015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[96719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_00881":null,"SJAG_02290":null,"SJAG_03102":null,"SJAG_03152":null,"SJAG_03671":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0009092":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null}}


id: GO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K14 acetylation (obsolete GO:0071441)","synonyms":[{"name":"down regulation of histone H3-K14 acetylation","type":"exact"},{"name":"down-regulation of histone H3-K14 acetylation","type":"exact"},{"name":"downregulation of histone H3-K14 acetylation","type":"exact"},{"name":"inhibition of histone H3-K14 acetylation","type":"narrow"},{"name":"negative regulation of histone H3 acetylation at K14","type":"exact"},{"name":"negative regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071441"}


id: GO:1905140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18359901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical ectodermal ridge formation","synonyms":[{"name":"regulation of AER formation","type":"related"},{"name":"regulation of apical epidermal ridge formation","type":"exact"},{"name":"regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905140"}


id: PBO:0066171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 4","termid":"PBO:0066171"}


id: PBO:0049445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GVQW motif containing 3","termid":"PBO:0049445"}


id: PBO:0055105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2523","termid":"PBO:0055105"}


id: PBO:0081095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 20 pseudogene 4","termid":"PBO:0081095"}


id: GO:0061710
data:
  {"annotated_genes":["SJAG_04700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114606],"is_not":false,"summary":null,"term":"GO:0061710"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threonine + ATP + bicarbonate = L-threonylcarbamoyladenylate + diphosphate + H2O.","definition_xrefs":["EC:2.7.7.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-threonylcarbamoyladenylate synthase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14569","RHEA:36407"],"termid":"GO:0061710","terms_by_termid":{"GO:0061710":null}}


id: GO:0110022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle myoblast proliferation.","definition_xrefs":["GOC:rph","PMID:26512644","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"regulates","term_name":"cardiac muscle myoblast proliferation","termid":"GO:0110021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle myoblast proliferation","termid":"GO:0110022"}


id: FYPO:0006871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased protein phosphorylation during cellular response to IR","type":"exact"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006871"}


id: GO:0102289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + 2 O2 + 2 NADPH + 2 H+ = 11-oxo-beta-amyrin + 3 H2O + 2 NADP.","definition_xrefs":["RHEA:31711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"beta-amyrin 11-oxidase activity","secondary_identifiers":["MetaCyc:RXN-12680","MetaCyc:RXN-12682","EC:1.14.14.152"],"termid":"GO:0102289"}


id: GO:0009471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class III cytochrome c (obsolete GO:0009471)","synonyms":[{"name":"class III cytochrome c","type":"exact"}],"termid":"GO:0009471"}


id: PBO:0071750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 6","termid":"PBO:0071750"}


id: FYPO:0002385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002385"}


id: GO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid catabolic process","synonyms":[{"name":"aldaric acid breakdown","type":"exact"},{"name":"aldaric acid catabolism","type":"exact"},{"name":"aldaric acid degradation","type":"exact"}],"termid":"GO:0019579"}


id: FYPO:0005510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"meiosis II metaphase/anaphase transition delay","synonyms":[{"name":"delayed cell cycle passage through meiosis II metaphase/anaphase transition","type":"exact"},{"name":"delayed metaphase/anaphase transition of meiosis II","type":"exact"},{"name":"delayed onset of meiotic anaphase II","type":"exact"},{"name":"increased duration of meiosis II metaphase","type":"related"},{"name":"increased duration of metaphase during meiosis II","type":"related"},{"name":"meiotic cell cycle delay at second metaphase/anaphase transition","type":"exact"},{"name":"metaphase/anaphase transition delay during meiosis II","type":"exact"},{"name":"metaphase/anaphase transition delay during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005510"}


id: PBO:0108620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 3","termid":"PBO:0108620"}


id: GO:0033566
data:
  {"annotated_genes":["SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990735"}]},"cv_name":"biological_process","definition":"Any process in which a gamma-tubulin complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-tubulin complex localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of gamma-tubulin complex localization","type":"exact"},{"name":"gamma-tubulin complex localisation","type":"exact"}],"termid":"GO:0033566","terms_by_termid":{"GO:1990735":null}}


id: PBO:0042456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 small effector 2","termid":"PBO:0042456"}


id: GO:0030057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction in which: on the cytoplasmic surface of each interacting plasma membrane is a dense plaque composed of a mixture of intracellular anchor proteins; a bundle of keratin intermediate filaments is attached to the surface of each plaque; transmembrane adhesion proteins of the cadherin family bind to the plaques and interact through their extracellular domains to hold the adjacent membranes together by a Ca2+-dependent mechanism.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815332181","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"desmosome","secondary_identifiers":["Wikipedia:Desmosome"],"synonyms":[{"name":"macula adherens","type":"exact"},{"name":"spot desmosome","type":"exact"}],"termid":"GO:0030057"}


id: PBO:0008152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csm1/Pcs1","termid":"PBO:0008152"}


id: GO:1900578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gerfelin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"gerfelin metabolic process","termid":"GO:1900576"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gerfelin biosynthetic process","synonyms":[{"name":"gerfelin anabolism","type":"exact"},{"name":"gerfelin biosynthesis","type":"exact"},{"name":"gerfelin formation","type":"exact"},{"name":"gerfelin synthesis","type":"exact"}],"termid":"GO:1900578"}


id: GO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.","definition_xrefs":["ISBN:0198506732","PMID:8970154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"chitosome","termid":"GO:0045009"}


id: GO:0035138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pectoral fin development","termid":"GO:0033339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin morphogenesis","termid":"GO:0035138"}


id: GO:0008878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate.","definition_xrefs":["RHEA:12120","EC:2.7.7.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"glucose-1-phosphate adenylyltransferase activity","secondary_identifiers":["MetaCyc:GLUC1PADENYLTRANS-RXN","KEGG_REACTION:R00948"],"synonyms":[{"name":"ADGase activity","type":"exact"},{"name":"ADP glucose pyrophosphorylase activity","type":"related"},{"name":"ADP-glucose diphosphorylase activity","type":"related"},{"name":"ADP-glucose pyrophosphorylase activity","type":"related"},{"name":"ADP-glucose synthase activity","type":"related"},{"name":"ADP-glucose synthetase activity","type":"related"},{"name":"ADP:alpha-D-glucose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ADPG pyrophosphorylase activity","type":"exact"},{"name":"ATP:alpha-D-glucose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ATP:alpha-glucose-1-phosphate adenylyl transferase activity","type":"exact"},{"name":"adenosine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"adenosine diphosphoglucose pyrophosphorylase activity","type":"related"},{"name":"glucose 1-phosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0008878"}


id: GO:1904797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of core promoter binding.","definition_xrefs":["PMID:22723415","GO_REF:0000059","GOC:nc","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of core promoter binding","synonyms":[{"name":"down regulation of core promoter binding","type":"exact"},{"name":"down-regulation of core promoter binding","type":"exact"},{"name":"downregulation of core promoter binding","type":"exact"},{"name":"inhibition of core promoter binding","type":"narrow"}],"termid":"GO:1904797"}


id: PBO:0071704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 2","termid":"PBO:0071704"}


id: PBO:0088238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific protein","termid":"PBO:0088238"}


id: PBO:0074857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 45A","termid":"PBO:0074857"}


id: PBO:0054994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2409","termid":"PBO:0054994"}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: PBO:0086133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa1p and possibly Iba57p; localizes to the mitochondrial intermembrane space, overexpression of ISA2 suppresses grx5 mutations","termid":"PBO:0086133"}


id: PBO:0057902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3529","termid":"PBO:0057902"}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: GO:0098591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The leaflet the apical region of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of plasma membrane","termid":"GO:0009897"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0009986"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0009986","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"external side of apical plasma membrane","termid":"GO:0098591"}


id: FYPO:0007408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal at sites encoding polyadenylation signals.","definition_xrefs":["PomBase:mah","PMID:32499400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at polyadenylation site","synonyms":[{"name":"abnormal protein localisation to chromatin at polyadenylation site","type":"exact"},{"name":"abnormal protein localization to chromatin at poly(A) site","type":"exact"},{"name":"abnormal protein localization to chromatin at polyadenylation site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at polyadenylation site during vegetative growth","type":"exact"}],"termid":"FYPO:0007408"}


id: PBO:0055732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 antisense RNA 1","termid":"PBO:0055732"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0005170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase (predicted)","termid":"PBO:0005170"}


id: GO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exonucleolytic digestion of a pre-rRNA molecule in the process to generate a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic trimming involved in rRNA processing (obsolete GO:0000459)","synonyms":[{"name":"exonucleolytic trimming during rRNA processing","type":"related"}],"termid":"GO:0000459"}


id: PBO:0065952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD18 E3 ubiquitin protein ligase","termid":"PBO:0065952"}


id: PBO:0075085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 135","termid":"PBO:0075085"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: PR:Q09732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sister chromatid cohesion protein DCC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein dcc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.15c","secondary_identifiers":["UniProtKB:Q09732"],"synonyms":[{"name":"Spom972h-DSCC1","type":"exact"},{"name":"defective in sister chromatid cohesion protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09732"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: GO:0052365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont xylan (obsolete GO:0052365)","termid":"GO:0052365"}


id: PBO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_input_(obsolete_RO:0002401)","termid":"PBO:0034250"}


id: GO:2000028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoperiodism, flowering.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoperiodism, flowering","synonyms":[{"name":"regulation of photoperiodic control of flowering time","type":"exact"},{"name":"regulation of photoperiodic control of inflorescence development","type":"exact"},{"name":"regulation of response to day length, flowering","type":"exact"},{"name":"regulation of response to night length, flowering","type":"exact"},{"name":"regulation of response to photoperiod, flowering","type":"exact"}],"termid":"GO:2000028"}


id: GO:0042558
data:
  {"annotated_genes":["SJAG_04156","SJAG_03224","SJAG_01616","SJAG_00815","SJAG_03098","SJAG_03914","SJAG_01766","SJAG_02408","SJAG_03712","SJAG_00106","SJAG_01466","SJAG_00529","SJAG_03275","SJAG_01126","SJAG_02225","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104367,108435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[67735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[110074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[102105,86394,104368,100967,100819,108436,109698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[110075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[100624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[104544,86395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"},{"annotations":[110077,102106,86396,100968,109699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[87380,104369,108438,90556,100820,94473,92709,100625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"},{"annotations":[89005,100784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00529":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03098":null,"SJAG_03224":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0019721"],"synonyms":[{"name":"pteridine and derivative metabolic process","type":"exact"},{"name":"pteridine and derivative metabolism","type":"exact"},{"name":"pteridine-containing compound metabolism","type":"exact"},{"name":"pterin metabolic process","type":"narrow"},{"name":"pterin metabolism","type":"narrow"}],"termid":"GO:0042558","terms_by_termid":{"GO:0006729":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0035999":null,"GO:0046452":null,"GO:0046654":null,"GO:0046655":null,"GO:0046656":null,"GO:0046901":null}}


id: PBO:0084137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity copper transporter of the plasma membrane; acts as a trimer; gene is disrupted by a Ty2 transposon insertion in many laboratory strains of S. cerevisiae","termid":"PBO:0084137"}


id: FYPO:0001398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only one end of a cell following cell division; patches may localize to either the old or the new end. A population of cells with this phenotype has a 1:1 mix of cells with actin patches at the old end and cells with patches at the new end.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to either end","synonyms":[{"name":"monopolar F-actin patch localization to either end","type":"exact"},{"name":"monopolar actin cortical patch localisation to either end","type":"exact"},{"name":"monopolar actin cortical patch localization to either end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to either end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at either end","type":"related"},{"name":"monopolar actin patch localization to either end","type":"exact"}],"termid":"FYPO:0001398"}


id: MOD:01614
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to glycyl phospho-5'-adenosine.","definition_xrefs":["PubMed:16388576","RESID:AA0511","PubMed:9632726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycyl phospho-5'-adenosine","synonyms":[{"name":"(2-aminoacetyl)oxy-([(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy)phosphinic acid","type":"exact"},{"name":"([(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl)-2-aminoethanoate","type":"exact"},{"name":"5'-adenylic-glyinate","type":"exact"},{"name":"MOD_RES Glycyl adenylate","type":"exact"},{"name":"aminoacetyl [5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl hydrogen phosphate","type":"exact"},{"name":"glycine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"glycyl 5'-adenylate","type":"exact"},{"name":"glycyl adenosine-5'-phosphate","type":"exact"},{"name":"glycyl phospho-5'-adenosine","type":"exact"},{"name":"glycyladenylate","type":"exact"}],"termid":"MOD:01614"}


id: PBO:0052754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 46","termid":"PBO:0052754"}


id: PBO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5B","termid":"PBO:0048817"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: PBO:0109295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX1 antisense RNA 1","termid":"PBO:0109295"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: PBO:0029214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-galactose_absent_from_cell_wall","termid":"PBO:0029214"}


id: GO:0002717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated immunity","secondary_identifiers":["GO:0045846"],"synonyms":[{"name":"activation of natural killer cell mediated immunity","type":"narrow"},{"name":"positive regulation of NK cell activity","type":"related"},{"name":"positive regulation of NK cell mediated immunity","type":"exact"},{"name":"positive regulation of natural killer cell activity","type":"related"},{"name":"stimulation of natural killer cell mediated immunity","type":"narrow"},{"name":"up regulation of natural killer cell mediated immunity","type":"exact"},{"name":"up-regulation of natural killer cell mediated immunity","type":"exact"},{"name":"upregulation of natural killer cell mediated immunity","type":"exact"}],"termid":"GO:0002717"}


id: PBO:0075544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1 divergent transcript","termid":"PBO:0075544"}


id: PBO:0084217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of mammalian ELMO (Engulfment and celL MOtility); upstream component for regulation through the small GTPase Rho5p; may form a complex with Dck1p that acts as a GEF for Rho5p; cytoplasmic protein that relocates to mitochondria under oxidative stress; implicated in mitophagy; not an essential protein","termid":"PBO:0084217"}


id: PBO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog Lon1 (predicted)","termid":"PBO:0000538"}


id: PBO:0057424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548X host gene","termid":"PBO:0057424"}


id: PR:Q9URX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto1 gene.","definition_xrefs":["UniProtKB:Q9URX4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C1039.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.11c","synonyms":[{"name":"Spom972h-gto1","type":"exact"}],"termid":"PR:Q9URX4"}


id: PBO:0060831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECTIN4 antisense RNA 1","termid":"PBO:0060831"}


id: PBO:0089090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit Rqc1","termid":"PBO:0089090"}


id: GO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein contributing to antigen processing and presentation.","definition_xrefs":["GOC:add","PMID:15771591","PMID:15224092","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}


id: GO:0061585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell in which orexin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion, neurotransmission","termid":"GO:0061544"},{"relation_name":"is_a","term_name":"orexin secretion","termid":"GO:0061584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"orexin secretion, neurotransmission","synonyms":[{"name":"hypocretin secretion, neurotransmission","type":"exact"}],"termid":"GO:0061585"}


id: PBO:0048645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 5","termid":"PBO:0048645"}


id: PBO:0000881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37 (predicted)","termid":"PBO:0000881"}


id: GO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + diphosphate = glycerol 1-phosphate + H+ + phosphate.","definition_xrefs":["RHEA:13689","EC:2.7.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"diphosphate-glycerol phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.79-RXN","KEGG_REACTION:R01044"],"synonyms":[{"name":"PPi-glycerol phosphotransferase activity","type":"related"},{"name":"diphosphate:glycerol 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--glycerol phosphotransferase activity","type":"related"}],"termid":"GO:0047331"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: GO:1905874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density organization.","definition_xrefs":["PMID:21887379","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"postsynaptic density organization","termid":"GO:0097106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic density organization","synonyms":[{"name":"regulation of PSD organization","type":"exact"},{"name":"regulation of post synaptic density organization","type":"exact"},{"name":"regulation of post-synaptic density organization","type":"exact"},{"name":"regulation of postsynaptic density organisation","type":"exact"}],"termid":"GO:1905874"}


id: FYPO:0002184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and tapered cells (obsolete FYPO:0002184)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and bottle/skittle cells","type":"exact"},{"name":"inviable mixed population including spores, germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002184"}


id: GO:1901193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0065003","GO:0008150","GO:0044085","GO:0002181"],"is_obsolete":false,"name":"regulation of formation of translation preinitiation complex","synonyms":[{"name":"regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"regulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901193"}


id: PBO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archael histone family protein","termid":"PBO:0001505"}


id: GO:1901515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of poly-beta-1,6-N-acetyl-D-glucosamine from one side of a membrane to the other.","definition_xrefs":["PMID:15090514","PMID:18359807","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"poly-beta-1,6-N-acetyl-D-glucosamine transmembrane transporter activity","termid":"GO:1901515"}


id: GO:0033018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"}


id: PBO:0071883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 21","termid":"PBO:0071883"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: PBO:0086228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that inhibits barbed-end actin filament elongation; interacts with Rvs167p; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086228"}


id: PBO:0050347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 50","termid":"PBO:0050347"}


id: PBO:0069595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 871, pseudogene","termid":"PBO:0069595"}


id: PBO:0076371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 8","termid":"PBO:0076371"}


id: GO:0072531
data:
  {"annotated_genes":["SJAG_04717","SJAG_04673","SJAG_03652","SJAG_00154","SJAG_03970","SJAG_02962","SJAG_04714","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[84205],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[84549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[95350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[96727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86238,86239,96728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"},{"annotations":[84560,91606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine-containing compound is transported across a membrane. A pyrimidine-containing compound is any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03970":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pyrimidine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072531","terms_by_termid":{"GO:0071934":null,"GO:0098721":null,"GO:0140125":null,"GO:1904082":null,"GO:1905530":null,"GO:1990519":null,"GO:1990545":null}}


id: PBO:0040129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 15","termid":"PBO:0040129"}


id: PBO:0077442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 176B","termid":"PBO:0077442"}


id: GO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class I","type":"exact"},{"name":"antigen presentation, exogenous antigen via major histocompatibility complex class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross priming","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"cross-priming","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0042590"}


id: FYPO:0006007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26941334","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of protein localization to cell division site","synonyms":[{"name":"normal duration of protein localisation to cell division site","type":"exact"},{"name":"normal duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal duration of protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0006007"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: PBO:0075923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 15","termid":"PBO:0075923"}


id: PBO:0090518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase complex I TFIIS subunit Rpa12","termid":"PBO:0090518"}


id: PBO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-conjugation_without_glucose_starvation","termid":"PBO:0030033"}


id: PBO:0049181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREM1 antisense RNA 1","termid":"PBO:0049181"}


id: PBO:0087767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p; required for the modification of the adenine at position 58 in tRNAs, especially tRNAi-Met; first identified as a negative regulator of GCN4 expression","termid":"PBO:0087767"}


id: PBO:0091683
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA-Like Protein","termid":"PBO:0091683"}


id: PBO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 35","termid":"PBO:0060088"}


id: GO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a sugar or dicarbonyl from a glycated L-arginine, L-lysine or L-cysteine residue within proteins that have been attacked and modified by glyoxal or 2-oxopropanal.","definition_xrefs":["GOC:PARL","PMID:25416785","PMID:26873906","PMID:14568004","EC:3.5.1.124","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein deglycase activity","synonyms":[{"name":"glyoxylase III","type":"exact"},{"name":"protein deglycating enzyme","type":"related"}],"termid":"GO:0036524"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: SO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon with the DNA sequence TAG.","direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon","termid":"SO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amber_stop_codon","synonyms":[{"name":"Amber stop codon","type":"exact"}],"termid":"SO:0002333"}


id: GO:0009478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c554 (obsolete GO:0009478)","synonyms":[{"name":"cytochrome c554","type":"exact"}],"termid":"GO:0009478"}


id: PBO:0050473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A1","termid":"PBO:0050473"}


id: PBO:0005743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Npp106","termid":"PBO:0005743"}


id: PATO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"photosensitive","termid":"PATO:0000547"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased photosensitivity","synonyms":[{"name":"high photosensitivity","type":"exact"}],"termid":"PATO:0001698"}


id: PBO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf12","termid":"PBO:0004207"}


id: PBO:0073589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 1","termid":"PBO:0073589"}


id: PBO:0059532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asp (GAU/C)","termid":"PBO:0059532"}


id: PBO:0027372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_disulfide_oxidoreductase_activity","termid":"PBO:0027372"}


id: PBO:0090995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 with SPX domain Pqr1/Spx1","termid":"PBO:0090995"}


id: PBO:0078274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-2","termid":"PBO:0078274"}


id: PBO:0109283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN1 divergent transcript","termid":"PBO:0109283"}


id: PBO:0065817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B, member RAS oncogene family","termid":"PBO:0065817"}


id: PBO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1","termid":"PBO:0090511"}


id: PBO:0029301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_substance_in_cell_during_G0","termid":"PBO:0029301"}


id: GO:0030447
data:
  {"annotated_genes":["SJAG_04312","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115074,115075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mcc","PMID:11729141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth","references_by_uniquename":{"PMID:34427722":null},"termid":"GO:0030447","terms_by_termid":{"GO:0030448":null}}


id: GO:0034567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chromate = chromium (III).","definition_xrefs":["PMID:14766567","UM-BBD_reactionID:r0884","PMID:22558308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chromate reductase activity","termid":"GO:0034567"}


id: GO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-1 adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-1 adrenergic receptor binding","synonyms":[{"name":"beta-1 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031697"}


id: PBO:0062707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 1","termid":"PBO:0062707"}


id: RO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure its axon forms (chemical) synapses in.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_presynaptic_terminal_in","termid":"RO:0002113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axon_synapses_in","termid":"RO:0002102"}


id: GO:0008581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the Gly76-Lys48 isopeptide bond of polyubiquitin.","definition_xrefs":["MEROPS:c19p001","ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-specific protease 5 activity (obsolete GO:0008581)","synonyms":[{"name":"ubiquitin isopeptidase T activity","type":"exact"},{"name":"ubiquitin-specific protease 5 activity","type":"exact"}],"termid":"GO:0008581"}


id: GO:0140543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the synthesis of piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of piRNA transcription","termid":"GO:0140542"},{"relation_name":"positively_regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of piRNA transcription","termid":"GO:0140543"}


id: GO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA + NADPH + H+ = 4 CoA + isoliquiritigenin + 3 CO2 + NADP+ + H2O.","definition_xrefs":["EC:2.3.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"6'-deoxychalcone synthase activity","secondary_identifiers":["MetaCyc:RXN-3142","RHEA:10584"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing, reducing) activity","type":"related"}],"termid":"GO:0033808"}


id: PBO:0041918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR1 antisense RNA 1","termid":"PBO:0041918"}


id: PBO:0077261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 10 pseudogene 1","termid":"PBO:0077261"}


id: PBO:0041991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 34 pseudogene 1","termid":"PBO:0041991"}


id: GO:0055119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the extent of cardiac muscle contraction is reduced.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of cardiac muscle","termid":"GO:0055119"}


id: PBO:0004980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.8S ribosomal RNA","termid":"PBO:0004980"}


id: PBO:0077375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 116","termid":"PBO:0077375"}


id: PBO:0057420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548v","termid":"PBO:0057420"}


id: FYPO:0000546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein modification begins later than normal. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"delayed onset of protein modification during vegetative growth","synonyms":[{"name":"delayed onset of protein modification during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein/peptide modification during vegetative growth","type":"exact"},{"name":"delayed protein modification during vegetative growth","type":"exact"},{"name":"protein/peptide modification: delayed","type":"related"}],"termid":"FYPO:0000546"}


id: PBO:0058862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9500","termid":"PBO:0058862"}


id: PBO:0087267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates Pan1p, Sla1p and Ent1p to negatively regulate endocytosis in response to membrane stress; regulates actin cytoskeleton organization and clathrin-dependent endocytosis; phosphorylated and inhibited by upstream kinase, Fpk1p; member, along with Ark1p and Prk1p, of the Ark kinase family","termid":"PBO:0087267"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: SO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core RNA polymerase II promoter element with consensus (G/A)T(T/G/A)(T/A)(G/T)(T/G)(T/G).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREd_motif","synonyms":[{"name":"BREd","type":"exact"},{"name":"BREd motif","type":"related"}],"termid":"SO:0001663"}


id: PBO:0069749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1031, pseudogene","termid":"PBO:0069749"}


id: MOD:01441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, standard, encoded residue.","definition_xrefs":["PubMed:18688235","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue","termid":"MOD:01441"}


id: GO:2000782
data:
  {"annotated_genes":["SJAG_04522","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103640,112602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000782","terms_by_termid":{"GO:2000784":null}}


id: PBO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid24 family protein (predicted)","termid":"PBO:0002931"}


id: PBO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 8","termid":"PBO:0071710"}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["PMID:16529801","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: PBO:0081704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 625","termid":"PBO:0081704"}


id: PBO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Cdt2","termid":"PBO:0001301"}


id: GO:0090356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"negatively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auxin metabolic process","synonyms":[{"name":"negative regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090356"}


id: GO:0035299
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113017],"is_not":false,"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ATP = 1D-myo-inositol hexakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate kinase activity","termid":"GO:0120517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855176","MetaCyc:RXN-7163","KEGG_REACTION:R05202","EC:2.7.1.158","Reactome:R-HSA-1855179"],"synonyms":[{"name":"IP5 2-kinase activity","type":"related"},{"name":"Ins(1,3,4,5,6)P5 2-kinase activity","type":"related"},{"name":"inositol hexakisphosphate synthase","type":"related"},{"name":"inositol pentakisphosphate 2-kinase activity","type":"exact"},{"name":"inositol polyphosphate kinase activity","type":"related"},{"name":"inositol-pentakisphosphate 2-kinase activity","type":"related"}],"termid":"GO:0035299","terms_by_termid":{"GO:0035299":null}}


id: PBO:0057236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 423","termid":"PBO:0057236"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: GO:1901842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of high voltage-gated calcium channel activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:12754254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of voltage-gated calcium channel activity","termid":"GO:1901386"},{"relation_name":"is_a","term_name":"regulation of high voltage-gated calcium channel activity","termid":"GO:1901841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of high voltage-gated calcium channel activity","synonyms":[{"name":"down regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"down-regulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage gated calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-dependent calcium channel activity","type":"exact"},{"name":"downregulation of high voltage-gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage gated calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-dependent calcium channel activity","type":"exact"},{"name":"inhibition of high voltage-gated calcium channel activity","type":"narrow"},{"name":"negative regulation of high voltage gated calcium channel activity","type":"exact"},{"name":"negative regulation of high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:1901842"}


id: PBO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 39","termid":"PBO:0070931"}


id: GO:0035442
data:
  {"annotated_genes":["SJAG_05182","SJAG_02139","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114327,114328],"is_not":false,"summary":null,"term":"GO:0035442"},{"annotations":[99054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide across a membrane by means of some agent such as a transporter or pore. A dipeptide is a combination of two amino acids linked together by a peptide (-CO-NH-) bond.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01983":null,"SJAG_02139":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"dipeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dipeptide membrane transport","type":"exact"}],"termid":"GO:0035442","terms_by_termid":{"GO:0035442":null,"GO:0140206":null}}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94419],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["UniPathway:UPA00655","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: PBO:0018049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Sir2","termid":"PBO:0018049"}


id: PBO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C13","termid":"PBO:0050513"}


id: GO:0014005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a microglial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglia development","synonyms":[{"name":"microglial cell development","type":"exact"}],"termid":"GO:0014005"}


id: GO:0003208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cardiac ventricle is generated and organized. A cardiac ventricle receives blood from a cardiac atrium and pumps it out of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac ventricle morphogenesis","termid":"GO:0003208"}


id: GO:0032460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"negatively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein oligomerization","synonyms":[{"name":"down regulation of protein oligomerization","type":"exact"},{"name":"down-regulation of protein oligomerization","type":"exact"},{"name":"downregulation of protein oligomerization","type":"exact"},{"name":"inhibition of protein oligomerization","type":"narrow"}],"termid":"GO:0032460"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: GO:0103047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methyl beta-D-glucoside 6-phosphate + H2O = beta-D-glucose 6-phosphate + methanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl beta-D-glucoside 6-phosphate glucohydrolase activity (obsolete GO:0103047)","termid":"GO:0103047"}


id: GO:0070883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a precursor microRNA (pre-miRNA) transcript, a stem-loop-containing precursor of microRNA.","definition_xrefs":["PMID:18951094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pre-miRNA binding","synonyms":[{"name":"pre-microRNA binding","type":"exact"},{"name":"precursor microRNA binding","type":"exact"}],"termid":"GO:0070883"}


id: MOD:00586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to pyridyl thiol","synonyms":[{"name":"PET","type":"related"},{"name":"phosphorylation to pyridyl thiol","type":"related"}],"termid":"MOD:00586"}


id: PBO:0081356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 181","termid":"PBO:0081356"}


id: GO:0032614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-11 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-11 production","secondary_identifiers":["GO:0072609","GO:0042230"],"synonyms":[{"name":"IL-11 production","type":"exact"},{"name":"interleukin-11 biosynthetic process","type":"narrow"},{"name":"interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032614"}


id: FYPO:0007182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, occurs to a lesser extent than normal at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PMID:31276301","GO:0070462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"decreased cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule catastrophe at cell tip","type":"related"},{"name":"decreased microtubule plus end shrinkage at cell tip","type":"related"},{"name":"decreased plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"reduced cytoplasmic microtubule depolymerization at plus end at cell tip","type":"exact"}],"termid":"FYPO:0007182"}


id: PBO:0067883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 185","termid":"PBO:0067883"}


id: GO:0048859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of anatomical boundary","termid":"GO:0048859"}


id: GO:0120518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[protein] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[protein].","definition_xrefs":["RHEA:75239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0034212","GO:0016740"],"is_obsolete":false,"name":"peptide-methionine-alpha-N-acetyltransferase activity","termid":"GO:0120518"}


id: FYPO:0008221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K56 acetylation during vegetative growth","termid":"FYPO:0008160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K56 acetylation during mitotic G2/M phase","termid":"FYPO:0008221"}


id: PBO:0066390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reeler domain containing 1","termid":"PBO:0066390"}


id: GO:2000191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of fatty acid transport","termid":"GO:2000191"}


id: PBO:0085696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in resistance to nitrosoguanidine and 6-azauracil; expression is regulated by transcription factors involved in multidrug resistance; SNG1 has a paralog, YJR015W, that arose from the whole genome duplication","termid":"PBO:0085696"}


id: PBO:0036166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein-protein_interaction","termid":"PBO:0036166"}


id: GO:0043575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell is received and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of osmotic stimulus","termid":"GO:0043575"}


id: PBO:0083698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsilon subunit of the oligosaccharyltransferase complex; located in the ER lumen; catalyzes asparagine-linked glycosylation of newly synthesized proteins","termid":"PBO:0083698"}


id: PBO:0049898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD family member 2","termid":"PBO:0049898"}


id: PBO:0065997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene B","termid":"PBO:0065997"}


id: PBO:0091700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase","termid":"PBO:0091700"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: FYPO:0003604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","gene_count":0,"genotype_count":0,"name":"obsolete sister chromatid separation during meiosis I (obsolete FYPO:0003604)","termid":"FYPO:0003604"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: PBO:0075798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18L1 subunit of BAF chromatin remodeling complex","termid":"PBO:0075798"}


id: PBO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Aps3 (predicted)","termid":"PBO:0000780"}


id: PBO:0082534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; expressed under anaerobic conditions and required for anaerobic growth; transcription is also induced by cold shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins","termid":"PBO:0082534"}


id: PBO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal DNA (rDNA) transcription factor Rrn3","termid":"PBO:0001432"}


id: PBO:0038657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 7, tartrate resistant (putative)","termid":"PBO:0038657"}


id: SO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The telomeric repeat is a repeat region, part of the chromosome, which in yeast, is a G-rich terminal sequence of the form (TG(1-3))n or more precisely ((TG)(1-6)TG(2-3))n.","definition_xrefs":["PMID:8720065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:telomeric_repeat","type":"exact"},{"name":"telomeric repeat","type":"exact"}],"termid":"SO:0001496"}


id: GO:0099083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Modulation of synaptic transmission by cell-cell signaling across the synaptic cleft from postsynapse to presynapse, mediated by a neuropeptide.","definition_xrefs":["PMID:19448629","GOC:dos","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide, modulating synaptic transmission","termid":"GO:0099083"}


id: PBO:0054812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2225","termid":"PBO:0054812"}


id: PBO:0076548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2","termid":"PBO:0076548"}


id: PBO:0064783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1D","termid":"PBO:0064783"}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: PBO:0079125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 1","termid":"PBO:0079125"}


id: PBO:0066466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 3 pseudogene 1","termid":"PBO:0066466"}


id: GO:0072662
data:
  {"annotated_genes":["SJAG_03324","SJAG_02997","SJAG_03440","SJAG_02619","SJAG_00891","SJAG_01854","SJAG_02034","SJAG_01165","SJAG_02693","SJAG_00702","SJAG_04763","SJAG_02797","SJAG_00326","SJAG_05315","SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86319,86522,101267,107412,62848,106066,92536,94294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[107873,99137,93022],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[97355,113309],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[86514,91494,107413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[93023,91495,86523,99138,86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to peroxisome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to peroxisome","type":"exact"}],"termid":"GO:0072662","terms_by_termid":{"GO:0006625":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0089869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing","termid":"PBO:0089869"}


id: PBO:0029258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029258"}


id: SO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A remnant of an integrated prophage in the host genome or an \\\"island\\\" in the host genome that includes phage like-genes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_prophage","secondary_identifiers":["http://ecoliwiki.net/colipedia/index.php/Category\\:Cryptic_Prophage.w"],"synonyms":[{"name":"cryptic prophage","type":"exact"}],"termid":"SO:0001007"}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: PR:000044700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044700"}


id: PBO:0069759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1042, pseudogene","termid":"PBO:0069759"}


id: PBO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotranferase/ diacylglycerol ethanolaminesphotranferase (predicted)","termid":"PBO:0000815"}


id: GO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-amino acid ester + H2O = an alpha-amino acid + an alcohol.","definition_xrefs":["EC:3.1.1.43","MetaCyc:ALPHA-AMINO-ACID-ESTERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha-amino-acid esterase activity","secondary_identifiers":["RHEA:17241","Reactome:R-HSA-6784959"],"synonyms":[{"name":"a-amino-acid esterase activity","type":"exact"},{"name":"alpha-amino acid ester hydrolase activity","type":"related"},{"name":"alpha-amino-acid ester hydrolase activity","type":"related"},{"name":"alpha-amino-acid-ester aminoacylhydrolase activity","type":"related"}],"termid":"GO:0047658"}


id: PBO:0075640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 5","termid":"PBO:0075640"}


id: PBO:0074615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 16B","termid":"PBO:0074615"}


id: MOD:01358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["PubMed:15602776","Unimod:687#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site N-term","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01358"}


id: PBO:0072480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 9","termid":"PBO:0072480"}


id: GO:0016813
data:
  {"annotated_genes":["SJAG_00035","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004037"},{"annotations":[93419,109230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.3.-"],"termid":"GO:0016813","terms_by_termid":{"GO:0004037":null,"GO:0004053":null}}


id: PBO:0084023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase involved in protein glycosylation; transfers GDP-mannose to methyl-alpha-mannoside in vitro; member of the KRE2/MNT1 mannosyltransferase family of type II membrane proteins with a short cytoplasmic N-terminus, a membrane-spanning region and a highly conserved catalytic lumenal domain","termid":"PBO:0084023"}


id: PBO:0079093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 6-1","termid":"PBO:0079093"}


id: PBO:0083214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YRF1-2/YER190W; identified by gene-trapping, expression analysis, and homology","termid":"PBO:0083214"}


id: PR:O14086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01631","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.03c","secondary_identifiers":["UniProtKB:O14086"],"synonyms":[{"name":"DNA-directed RNA polymerase I 49 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A49 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1E","type":"exact"}],"termid":"PR:O14086"}


id: GO:0090706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which information that determines the correct position at which plant organ primordia are formed is generated and perceived resulting in correct positioning of the new plant organ.","definition_xrefs":["PMID:9611175","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of plant organ position","termid":"GO:0090706"}


id: PBO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q6, monooxygenase","termid":"PBO:0043661"}


id: PBO:0073639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 26, pseudogene","termid":"PBO:0073639"}


id: FYPO:0004206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature snRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered snRNA or precursor level","termid":"FYPO:0005997"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased mature snRNA level","synonyms":[{"name":"increased mature small nuclear RNA level","type":"exact"},{"name":"increased mature snRNA accumulation","type":"related"},{"name":"increased mature snRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature snRNA level during vegetative growth","type":"exact"},{"name":"increased mature snRNA transcript level","type":"broad"},{"name":"increased snRNA level","type":"broad"}],"termid":"FYPO:0004206"}


id: PBO:0091413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB","termid":"PBO:0091413"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: PBO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transmembrane transporter Ggc1 (predicted)","termid":"PBO:0018123"}


id: PBO:0034792
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncertain translation start point","termid":"PBO:0034792"}


id: PBO:0039037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 14, pseudogene","termid":"PBO:0039037"}


id: PBO:0073838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 14","termid":"PBO:0073838"}


id: PBO:0111792
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0111792"}


id: GO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxypalmitoyl-[acyl-carrier protein] = 2-hexadecenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:8088535"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity (obsolete GO:0004317)","synonyms":[{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase (hexadec-2-enoyl-acyl-carrier protein-forming)","type":"exact"},{"name":"(3R)-3-hydroxypalmitoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"(3R)-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxypalmitoyl-acyl-carrier-protein dehydratase activity","type":"exact"}],"termid":"GO:0004317"}


id: GO:1903927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyanide stimulus.","definition_xrefs":["PMID:21854848","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyanide","termid":"GO:1903927"}


id: PBO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expresses","termid":"PBO:0034129"}


id: PATO:0001534
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's having 3 or more hues or degrees of saturations.","definition_xrefs":["merriam-webster.:merriam-webster."],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motley","termid":"PATO:0001534"}


id: PBO:0048414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 3","termid":"PBO:0048414"}


id: SO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A translocation where the regions involved are from different chromosomes.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_translocation","termid":"SO:0002060"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: MOD:00894
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 128.058578 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 128.058578 Da","termid":"MOD:00894"}


id: GO:0022625
data:
  {"annotated_genes":["SJAG_01194","SJAG_02531","SJAG_03326","SJAG_01568","SJAG_02535","SJAG_04897","SJAG_01128","SJAG_01565","SJAG_03159","SJAG_01551","SJAG_04176","SJAG_03971","SJAG_03383","SJAG_04066","SJAG_04414","SJAG_04304","SJAG_02081","SJAG_00220","SJAG_00465","SJAG_00921","SJAG_04847","SJAG_05216","SJAG_00155","SJAG_01322","SJAG_04534","SJAG_04160","SJAG_02283","SJAG_02121","SJAG_05248","SJAG_03666","SJAG_07014","SJAG_00765","SJAG_02840","SJAG_03364","SJAG_04020","SJAG_02802","SJAG_01588","SJAG_03133","SJAG_02546","SJAG_01411","SJAG_03197","SJAG_00166","SJAG_02280","SJAG_01364","SJAG_02890","SJAG_06612","SJAG_02510","SJAG_01719","SJAG_02891","SJAG_00726","SJAG_02597","SJAG_03922","SJAG_07013","SJAG_02312","SJAG_04626","SJAG_04478","SJAG_00748","SJAG_02611","SJAG_03423","SJAG_03043","SJAG_00384","SJAG_01676","SJAG_01580","SJAG_02871","SJAG_00537","SJAG_02207","SJAG_03122","SJAG_00034","SJAG_01853","SJAG_00749","SJAG_00629","SJAG_01202","SJAG_03425","SJAG_00940","SJAG_01721","SJAG_01087","SJAG_02243","SJAG_03335","SJAG_03127","SJAG_01365","SJAG_02755","SJAG_03919","SJAG_01608"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83790,83791,84192,84209,84210,84211,84293,85471,85702,86193,86194,86328,86329,87100,87101,87102,87126,87127,88548,88549,89639,89640,89677,89678,90947,90948,90973,90974,92259,92260,92891,92892,93143,93232,93240,93241,93506,93507,93525,93526,93541,93542,94268,94269,95133,95134,95219,95220,95920,95921,96476,96477,96836,96837,96958,97255,97366,97367,97410,97411,97719,97720,97945,97946,98513,98514,98530,98531,100146,100147,100827,101451,101452,101578,101746,101747,103110,103111,103897,104010,104202,104213,104214,104234,104235,104343,104344,104638,104639,105554,105555,105851,105852,106303,106304,106755,106756,107057,107058,107124,107125,107646,107647,107962,108038,108039,108138,108139,108218,108219,108344,108345,108406,108407,109513,109528,109529,109934,109935,110038,110039,110489,110490,110534,110535,111182,111183,111354,111355,111720,112586,112587,112784,112785,112894,112895,113425,113426,113589,113590,113638,113647,113648,113761,113944,114251,114252,114773,114774,114883,114884,114940,114941],"is_not":false,"summary":null,"term":"GO:0022625"}]},"cv_name":"cellular_component","definition":"The large subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit","termid":"GO:0015934"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":83,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00384":null,"SJAG_00465":null,"SJAG_00537":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01411":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01608":null,"SJAG_01676":null,"SJAG_01719":null,"SJAG_01721":null,"SJAG_01853":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02207":null,"SJAG_02243":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02510":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02755":null,"SJAG_02802":null,"SJAG_02840":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_03043":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03197":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03423":null,"SJAG_03425":null,"SJAG_03666":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04020":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04176":null,"SJAG_04304":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04847":null,"SJAG_04897":null,"SJAG_05216":null,"SJAG_05248":null,"SJAG_06612":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0022626"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005829","GO:0005737","GO:0022626"],"is_obsolete":false,"name":"cytosolic large ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0030872","GO:0030498","GO:0005842","GO:0009282"],"synonyms":[{"name":"50S ribosomal subunit","type":"narrow"},{"name":"60S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal LSU","type":"narrow"},{"name":"prokaryotic large ribosomal subunit","type":"narrow"}],"termid":"GO:0022625","terms_by_termid":{"GO:0022625":null}}


id: PBO:0017674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionyl-tRNA formyltransferase Fmt1 (predicted)","termid":"PBO:0017674"}


id: GO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"}


id: CHEBI:75044
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phleomycin","termid":"CHEBI:75044"}


id: FYPO:0000432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased fermentation","synonyms":[{"name":"decreased fermentation during mitotic cell cycle","type":"related"},{"name":"decreased fermentation during vegetative growth","type":"exact"},{"name":"decreased fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: decreased","type":"related"},{"name":"reduced fermentation","type":"exact"}],"termid":"FYPO:0000432"}


id: PBO:0064224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCE1 antisense RNA 1","termid":"PBO:0064224"}


id: GO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type IV secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052058)","termid":"GO:0052058"}


id: GO:1990838
data:
  {"annotated_genes":["SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89795],"is_not":false,"summary":null,"term":"GO:1990838"}]},"cv_name":"molecular_function","definition":"Catalysis of 3' exonucleolytic cleavage of poly(U), to form poly(U)-N containing a 3' uridine cyclic phosphate (U>P).","definition_xrefs":["PMID:23022480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-RNA exonuclease activity","termid":"GO:0000175"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140098","GO:0016788","GO:0004527","GO:0003674"],"is_obsolete":false,"name":"poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990838","terms_by_termid":{"GO:1990838":null}}


id: FYPO:0000989
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115566,115564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115565,115567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[115076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"},{"annotations":[115283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115262,115263,115261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"},{"annotations":[115551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"altered level of substance in cell","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_03689","SJAG_04697","SJAG_00426","SJAG_01956"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal level of substance in cell","type":"exact"}],"termid":"FYPO:0000989","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004695":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: PBO:0082739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; essential for mitotic growth; RSC6 has a paralog, SNF12, that arose from the whole genome duplication","termid":"PBO:0082739"}


id: PBO:0058589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6722","termid":"PBO:0058589"}


id: GO:0034902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan sulfate + H2O = endosulfan diol + sulfite.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan sulfate hydrolase activity (obsolete GO:0034902)","termid":"GO:0034902"}


id: GO:0032324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:Molybdenum-Cofactor-Biosynthesis"],"synonyms":[{"name":"molybdopterin cofactor anabolism","type":"exact"},{"name":"molybdopterin cofactor biosynthesis","type":"related"},{"name":"molybdopterin cofactor formation","type":"related"},{"name":"molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0032324"}


id: FYPO:0000652
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[115205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a molecular function such as binding or catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotype","termid":"FYPO:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"name":"molecular function phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01458","SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","acb1delta"],"synonyms":[{"name":"fission yeast molecular function phenotype","type":"exact"}],"termid":"FYPO:0000652","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: FYPO:0005152
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115475],"is_not":false,"summary":null,"term":"FYPO:0005152"}]},"cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caspofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to caspofungin","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"resistance to caspofungin during mitotic cell cycle","type":"related"},{"name":"resistance to caspofungin during vegetative growth","type":"exact"},{"name":"resistant to caspofungin","type":"exact"}],"termid":"FYPO:0005152","terms_by_termid":{"FYPO:0005152":null,"FYPO_EXT:0000002":null}}


id: PBO:0054850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2264","termid":"PBO:0054850"}


id: PBO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRC1-R/borderline right","termid":"PBO:0013793"}


id: GO:0051305
data:
  {"annotated_genes":["SJAG_03683","SJAG_01805","SJAG_01613","SJAG_02336","SJAG_01297","SJAG_03540","SJAG_02761","SJAG_02624","SJAG_02814","SJAG_00794","SJAG_04076"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114127],"is_not":false,"summary":null,"term":"GO:0051305"},{"annotations":[111934,91378,95273,98488,114647,96433,89865,114129,105164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[99943,96435,104280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"}]},"cv_name":"biological_process","definition":"The directed movement of chromosomes in the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based movement","termid":"GO:0007018"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome migration to spindle pole","type":"exact"},{"name":"chromosome movement","type":"broad"},{"name":"chromosome movement to spindle pole","type":"exact"}],"termid":"GO:0051305","terms_by_termid":{"GO:0007079":null,"GO:0051305":null,"GO:1990571":null}}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: PBO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper transporter Ctr6","termid":"PBO:0003903"}


id: GO:0045582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte differentiation","termid":"GO:0045621"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell differentiation","synonyms":[{"name":"activation of T cell differentiation","type":"narrow"},{"name":"positive regulation of T cell development","type":"related"},{"name":"positive regulation of T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of T-cell differentiation","type":"exact"},{"name":"positive regulation of T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of T cell differentiation","type":"narrow"},{"name":"up regulation of T cell differentiation","type":"exact"},{"name":"up-regulation of T cell differentiation","type":"exact"},{"name":"upregulation of T cell differentiation","type":"exact"}],"termid":"GO:0045582"}


id: GO:0019091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lrRNA, large subunit ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial rRNA export from mitochondrion","termid":"GO:0019090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial lrRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial lrRNA","type":"broad"},{"name":"mitochondrial lrRNA export","type":"exact"},{"name":"mitochondrial lrRNA export from mitochondria","type":"exact"},{"name":"mitochondrial lrRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial lrRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019091"}


id: FYPO:0000705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another does not occur. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished protein-protein interaction","synonyms":[{"name":"abolished protein binding","type":"exact"},{"name":"protein binding abolished","type":"exact"}],"termid":"FYPO:0000705"}


id: FYPO:0005078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of canavanine and rapamycin. Cells stop growing (and may die) at concentrations of canavanine and rapamycin that allows wild type cells to grow.","definition_xrefs":["PMID:17179073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to canavanine and rapamycin","synonyms":[{"name":"hypersensitive to canavanine and rapamycin","type":"exact"},{"name":"sensitive to canavanine and rapamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine and rapamycin during vegetative growth","type":"exact"},{"name":"sensitive to canavanine and rapamycin in combination","type":"exact"}],"termid":"FYPO:0005078"}


id: PBO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/snRNA/rRNA pseudouridine synthase Pus7","termid":"PBO:0090221"}


id: PBO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 like","termid":"PBO:0061279"}


id: PR:Q9HGM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIT family protein scs3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.08","synonyms":[{"name":"Spom972h-SPBC543.08","type":"exact"}],"termid":"PR:Q9HGM4"}


id: PBO:0054790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2203","termid":"PBO:0054790"}


id: PBO:0053326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 115","termid":"PBO:0053326"}


id: PBO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Familial Kufor-Rakeb Syndrome","termid":"PBO:0017816"}


id: PBO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology_during_vegetative_growth","termid":"PBO:0030224"}


id: PBO:0053502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 485","termid":"PBO:0053502"}


id: PBO:0062441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 105 pseudogene","termid":"PBO:0062441"}


id: GO:0036414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline on a histone protein.","definition_xrefs":["GOC:als","PMID:23175390","PMID:22853951"],"gene_count":0,"genotype_count":0,"name":"obsolete histone citrullination (obsolete GO:0036414)","synonyms":[{"name":"histone deimination","type":"exact"}],"termid":"GO:0036414"}


id: PR:O94445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpm2 gene.","definition_xrefs":["UniProtKB:O94445","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase suv3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.11","synonyms":[{"name":"Spom972h-rpm2","type":"exact"}],"termid":"PR:O94445"}


id: FYPO:0005099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(A) polymerase activity","termid":"FYPO:0005098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased poly(A) polymerase activity","synonyms":[{"name":"decreased PAP activity","type":"exact"},{"name":"decreased polynucleotide adenylyltransferase activity","type":"exact"},{"name":"reduced poly(A) polymerase activity","type":"exact"}],"termid":"FYPO:0005099"}


id: PBO:0048227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GADD45G interacting protein 1","termid":"PBO:0048227"}


id: PBO:0079335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 21","termid":"PBO:0079335"}


id: PBO:0108696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp51","termid":"PBO:0108696"}


id: PATO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000023 relative compatability (obsolete PATO:0000023)","termid":"PATO:0000023"}


id: GO:0080110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sporopollenin, a primary constituent of the pollen exine layer.","definition_xrefs":["PMID:19218397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"part_of","term_name":"pollen exine formation","termid":"GO:0010584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"sporopollenin biosynthetic process","synonyms":[{"name":"sporopollenin biosynthesis","type":"exact"}],"termid":"GO:0080110"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23073:SF7","OMA:SCHPO01437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: PBO:0080291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 55 pseudogene","termid":"PBO:0080291"}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:tb","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: PBO:0054554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1955","termid":"PBO:0054554"}


id: GO:0010672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["PMID:12161753","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010672)","synonyms":[{"name":"regulation of meiosis by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"}],"termid":"GO:0010672"}


id: PBO:0047937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q13.2)","termid":"PBO:0047937"}


id: GO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any B cell selection process that occurs in the periphery.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell selection","synonyms":[{"name":"peripheral B lymphocyte selection","type":"exact"},{"name":"peripheral B-cell selection","type":"exact"},{"name":"peripheral B-lymphocyte selection","type":"exact"}],"termid":"GO:0002343"}


id: PBO:0031406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_with_long_tip","termid":"PBO:0031406"}


id: PBO:0071969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase B2","termid":"PBO:0071969"}


id: GO:2000314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:2000313"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"negative regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000314"}


id: PATO:0005002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the shape of a pear; tapering near the top and bulging toward the base or bottom. From thefreedictionary.com","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pear shaped","termid":"PATO:0005002"}


id: PBO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 5","termid":"PBO:0043523"}


id: GO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"}


id: PBO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 89, pseudogene","termid":"PBO:0052823"}


id: PR:O74942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidylprolyl isomerase domain and WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04259","PRO:DNx","PANTHER:PTHR11071:SF40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.04","secondary_identifiers":["UniProtKB:O74942"],"synonyms":[{"name":"PPIase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPWD1","type":"exact"},{"name":"cyclophilin 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74942"}


id: PBO:0049508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 15","termid":"PBO:0049508"}


id: GO:0038145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine macrophage colony-stimulating factor (M-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:uh","Wikipedia:Macrophage_colony-stimulating_factor","PMID:12138890","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"M-CSF signaling pathway","type":"exact"},{"name":"macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:0038145"}


id: GO:0050567
data:
  {"annotated_genes":["SJAG_01577","SJAG_02721","SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92729,107312,114385],"is_not":false,"summary":null,"term":"GO:0050567"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + glutamyl-tRNA(Gln) + ATP = L-glutamate + glutaminyl-tRNA(Gln) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.7-RXN","EC:6.3.5.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140101","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0017068","GO:0008264","RHEA:17521","Wikipedia:Glutaminyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Glu-AdT activity","type":"related"},{"name":"Glu-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"glutaminyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"glutamyl-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050567","terms_by_termid":{"GO:0050567":null}}


id: PBO:0063065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 4 (inactive)","termid":"PBO:0063065"}


id: GO:0072535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of tumor necrosis factor superfamily member 11 (TNFSF11; RANKL) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"RANKL production","type":"exact"},{"name":"TNFSF11 production","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 production","type":"exact"}],"termid":"GO:0072535"}


id: GO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of oomycetes origin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of oomycetes origin","termid":"GO:0002240"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"part_of","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of oomycetes origin","synonyms":[{"name":"cellular response to oomycetes associated molecule","type":"exact"}],"termid":"GO:0071227"}


id: PBO:0077948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 8-1","termid":"PBO:0077948"}


id: PBO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) Hos2","termid":"PBO:0001914"}


id: GO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149","GOC:mtg_sensu","PMID:16177805","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of innate immune response","secondary_identifiers":["GO:0002219"],"termid":"GO:0002218"}


id: PR:Q9URV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C106.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.12c","synonyms":[{"name":"Spom972h-tho4","type":"exact"}],"termid":"PR:Q9URV0"}


id: PBO:0024875
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae MOG1","termid":"PBO:0024875"}


id: PBO:0086062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with translating ribosomes; interacts with GTPase Rbg1p","termid":"PBO:0086062"}


id: PBO:0088402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit Shf1","termid":"PBO:0088402"}


id: SO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_component","synonyms":[{"name":"repeat component","type":"exact"}],"termid":"SO:0000840"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: PBO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 2","termid":"PBO:0046376"}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: PBO:0064439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNRC1 divergent transcript","termid":"PBO:0064439"}


id: PBO:0057770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2116","termid":"PBO:0057770"}


id: GO:1990300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellulosome, an extracellular multi-enzyme complex containing several enzymes aligned on a non-catalytic scaffolding that functions to hydrolyze plant cell wall polysaccharides.","definition_xrefs":["PMID:15197390","GOC:mengo_curators","PMID:11893054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellulosome binding","secondary_identifiers":["GO:1990301"],"synonyms":[{"name":"scaffoldin complex binding","type":"narrow"}],"termid":"GO:1990300"}


id: GO:0003905
data:
  {"annotated_genes":["SJAG_01971","SJAG_05257"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97625],"is_not":false,"summary":null,"term":"GO:0003905"},{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[73564,97628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[73570,97629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA with alkylated base + H2O = DNA with abasic site + alkylated base. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar to remove an alkylated base, leaving an apyrimidinic or apurinic site.","definition_xrefs":["GOC:elh","PMID:10872450","PMID:9224623","EC:3.2.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01971":null,"SJAG_05257":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"alkylbase DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004036","MetaCyc:3.2.2.21-RXN"],"synonyms":[{"name":"3-methyladenine DNA glycosylase II","type":"related"},{"name":"AlkA","type":"related"},{"name":"DNA glycosidase II activity","type":"related"},{"name":"DNA-3-methyladenine glycosidase II activity","type":"exact"},{"name":"DNA-3-methyladenine glycosylase II","type":"related"},{"name":"alkylated-DNA glycohydrolase (releasing methyladenine and methylguanine)","type":"broad"},{"name":"alkylbase DNA glycosidase activity","type":"exact"},{"name":"deoxyribonucleate 3-methyladenine glycosidase II","type":"related"}],"termid":"GO:0003905","terms_by_termid":{"GO:0003905":null,"GO:0008725":null,"GO:0043916":null,"GO:0052820":null}}


id: GO:1901403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole metabolic process","synonyms":[{"name":"activation of tetrapyrrole metabolic process","type":"narrow"},{"name":"activation of tetrapyrrole metabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole metabolism","type":"exact"},{"name":"up regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"up regulation of tetrapyrrole metabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole metabolic process","type":"exact"},{"name":"up-regulation of tetrapyrrole metabolism","type":"exact"},{"name":"upregulation of tetrapyrrole metabolic process","type":"exact"},{"name":"upregulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901403"}


id: SO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which the function of a gene product is altered with respect to a reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"functional_effect_variant","termid":"SO:0001536"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_abnormal","synonyms":[{"name":"function modified variant","type":"exact"},{"name":"function_modified_variant","type":"related"},{"name":"functionally abnormal","type":"related"}],"termid":"SO:0002218"}


id: PBO:0011991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris Related Protein 1","termid":"PBO:0011991"}


id: PBO:0084291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral subunit of the pre-mRNA CPF complex; the cleavage and polyadenylation factor (CPF) complex plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex","termid":"PBO:0084291"}


id: FYPO:0001704
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115100,115297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is abnormal. A cell cycle checkpoint normally controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events. In a mutant, the checkpoint may fail to activate under appropriate conditions, or may occur to a greater or lesser extent than wild type under any specified set of conditions.","definition_xrefs":["GO:0007093","GO:0000075","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001704","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0080393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26A pseudogene 1","termid":"PBO:0080393"}


id: GO:0075340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of growth or development of symbiont during interaction with host (obsolete GO:0075340)","synonyms":[{"name":"negative regulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075340"}


id: GO:0016477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues.","definition_xrefs":["GOC:ems","Wikipedia:Cell_migration","GOC:dph","GOC:cjm","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration","termid":"GO:0016477"}


id: PBO:0043699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 5","termid":"PBO:0043699"}


id: GO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cysteine-type aminopeptidase activity","termid":"GO:0070005"}


id: GO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to estrogen","termid":"GO:0043627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estrogen stimulus","synonyms":[{"name":"cellular response to 17alpha-ethynylestradiol","type":"related"},{"name":"cellular response to oestrogen stimulus","type":"exact"}],"termid":"GO:0071391"}


id: GO:0120145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a basal ectoplasmic specialization.","definition_xrefs":["PMID:22872576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to basal ectoplasmic specialization","synonyms":[{"name":"protein localisation in basal ectoplasmic specialization","type":"exact"},{"name":"protein localisation to basal ectoplasmic specialization","type":"exact"},{"name":"protein localization in basal ectoplasmic specialization","type":"exact"}],"termid":"GO:0120145"}


id: FYPO:0006345
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal the cell is subject to nitrogen starvation. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during nitrogen starvation","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"prolonged protein phosphorylation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006345"}


id: GO:1903840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite(3-) stimulus.","definition_xrefs":["GO_REF:0000071","PMID:12106899","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite(3-)","termid":"GO:1903840"}


id: PBO:0004455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA primase large subunit Spp2","termid":"PBO:0004455"}


id: GO:1900184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"negatively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"down regulation of xanthone biosynthesis","type":"narrow"},{"name":"down regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down regulation of xanthone-containing compound formation","type":"exact"},{"name":"down regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"down-regulation of xanthone biosynthesis","type":"narrow"},{"name":"down-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down-regulation of xanthone-containing compound formation","type":"exact"},{"name":"down-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"downregulation of xanthone biosynthesis","type":"narrow"},{"name":"downregulation of xanthone biosynthetic process","type":"narrow"},{"name":"downregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"downregulation of xanthone-containing compound formation","type":"exact"},{"name":"downregulation of xanthone-containing compound synthesis","type":"exact"},{"name":"inhibition of xanthone biosynthesis","type":"narrow"},{"name":"inhibition of xanthone biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound anabolism","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthesis","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound formation","type":"exact"},{"name":"inhibition of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthone biosynthesis","type":"narrow"},{"name":"negative regulation of xanthone biosynthetic process","type":"narrow"},{"name":"negative regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"negative regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"negative regulation of xanthone-containing compound formation","type":"exact"},{"name":"negative regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthones anabolism","type":"exact"}],"termid":"GO:1900184"}


id: FYPO:0004051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutathione transferase activity","termid":"FYPO:0003981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased glutathione transferase activity during stationary phase","synonyms":[{"name":"increased glutathione transferase activity in stationary phase","type":"exact"}],"termid":"FYPO:0004051"}


id: GO:1990417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of snoRNA from pre-rRNA.","definition_xrefs":["GOC:rb","PMID:16908538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"snoRNA release from pre-rRNA","termid":"GO:1990417"}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["PMID:11809816","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006913","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: GO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of a macrophage.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage differentiation","synonyms":[{"name":"macrophage cell differentiation","type":"exact"}],"termid":"GO:0030225"}


id: PBO:0074341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","termid":"PBO:0074341"}


id: PBO:0043609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 2","termid":"PBO:0043609"}


id: FYPO:0000130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"short spindle","synonyms":[{"name":"decreased spindle length","type":"exact"},{"name":"short spindles","type":"exact"},{"name":"spindle defects, short spindles","type":"exact"}],"termid":"FYPO:0000130"}


id: PBO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 4","termid":"PBO:0045684"}


id: PBO:0091484
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 1","termid":"PBO:0091484"}


id: GO:0021863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["PMID:16226447","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast differentiation","termid":"GO:0014016"},{"relation_name":"part_of","term_name":"forebrain generation of neurons","termid":"GO:0021872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain neuroblast differentiation","synonyms":[{"name":"abventricular progenitor cell differentiation","type":"exact"},{"name":"intermediate progenitor cell differentiation","type":"exact"},{"name":"non-surface dividing progenitor cell differentiation","type":"exact"}],"termid":"GO:0021863"}


id: PBO:0084559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Dpi29p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with nascent polypeptide chains; interacts with Mdm38p and may recruit mRNA-specific translational activators to the mitoribosome; null mutant displays decreased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084559"}


id: GO:0061305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of established bipolar anisotropic intracellular organization or cell growth patterns that results in the shaping of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061305"}


id: PBO:0060790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S1","termid":"PBO:0060790"}


id: GO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"positively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"narrow"},{"name":"stimulation of eye pigmentation","type":"narrow"},{"name":"up regulation of eye pigmentation","type":"exact"},{"name":"up-regulation of eye pigmentation","type":"exact"},{"name":"upregulation of eye pigmentation","type":"exact"}],"termid":"GO:0048075"}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: GO:0021527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of association neurons. Association neurons are cells located in the dorsal portion of the spinal cord that integrate sensory input. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","PMID:11262869","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"dorsal spinal cord development","termid":"GO:0021516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord association neuron differentiation","synonyms":[{"name":"spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:0021527"}


id: PR:000028989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol regulatory element-binding protein that is a translation product of the Schizosaccharomyces pombe 972h- sre1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1-type sterol regulatory element-binding protein 1","synonyms":[{"name":"SRE-1","type":"related"},{"name":"SRE1","type":"related"},{"name":"SREBP1","type":"related"},{"name":"sre1","type":"exact"}],"termid":"PR:000028989"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["PMID:14747994","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: SO:0000139
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id: GO:0042995
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