# terms

id: PBO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ODC1 divergent transcript","termid":"PBO:0061797"}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: PBO:0073479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3GL interacting endocytic adaptor 1","termid":"PBO:0073479"}


id: GO:0005523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tropomyosin binding","termid":"GO:0005523"}


id: PBO:0031673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_secretion","termid":"PBO:0031673"}


id: PBO:0069638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 915, pseudogene","termid":"PBO:0069638"}


id: PBO:0085541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7A has a paralog, RPS7B, that arose from the whole genome duplication","termid":"PBO:0085541"}


id: GO:0035758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 21.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 binding","synonyms":[{"name":"CCL21 binding","type":"exact"}],"termid":"GO:0035758"}


id: PBO:0058704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6832","termid":"PBO:0058704"}


id: PBO:0056803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1 pseudogene 1","termid":"PBO:0056803"}


id: PR:O60083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb6 gene.","definition_xrefs":["UniProtKB:O60083","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1494.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.09c","synonyms":[{"name":"Spom972h-tfb6","type":"exact"}],"termid":"PR:O60083"}


id: PBO:0069329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 588, pseudogene","termid":"PBO:0069329"}


id: FYPO:0007260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is abnormal in the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}


id: PATO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000106 acid sensitivity (obsolete PATO:0000106)","termid":"PATO:0000106"}


id: PBO:0066714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 11","termid":"PBO:0066714"}


id: GO:0102976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol + NADP = versiconal hemiacetal + NADPH + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"versiconal reductase activity","secondary_identifiers":["MetaCyc:RXN-9491","RHEA:35699"],"termid":"GO:0102976"}


id: PBO:0058397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4769","termid":"PBO:0058397"}


id: FYPO:0002967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to spindle pole body","termid":"FYPO:0001836"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to mitotic SPB","type":"exact"},{"name":"normal protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0002967"}


id: FYPO:0006342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"decreased microtubule binding","synonyms":[{"name":"reduced microtubule binding","type":"exact"}],"termid":"FYPO:0006342"}


id: GO:0019522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"ketogluconate metabolic process","secondary_identifiers":["MetaCyc:KETOGLUCONMET-PWY"],"synonyms":[{"name":"ketogluconate metabolism","type":"exact"}],"termid":"GO:0019522"}


id: PBO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II and III subunit Rpb6","termid":"PBO:0005277"}


id: PBO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_caffeine","termid":"PBO:0030844"}


id: PBO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicarbonyl and L-xylulose reductase","termid":"PBO:0044665"}


id: FYPO:0004385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of single-stranded DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA binding","termid":"FYPO:0000658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased single-stranded DNA binding","synonyms":[{"name":"decreased ssDNA binding","type":"exact"},{"name":"reduced single-stranded DNA binding","type":"exact"}],"termid":"FYPO:0004385"}


id: PBO:0043843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPVL antisense RNA 1","termid":"PBO:0043843"}


id: GO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine hydroxymethyltransferase activity, the catalysis of the reaction 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine.","definition_xrefs":["EC:2.1.2.1","PMID:19223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycine hydroxymethyltransferase activity","termid":"GO:0080114"}


id: PATO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant that exists at the cellular level of organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular quality","termid":"PATO:0001396"}


id: PBO:0088599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-Golgi network aminophospholipid translocase (flippase), Dnf1","termid":"PBO:0088599"}


id: PBO:0057190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 362","termid":"PBO:0057190"}


id: _global:member_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"member_of","termid":"_global:member_of"}


id: MOD:00882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-aminoethyl)cysteine.","definition_xrefs":["PubMed:12923550","DeltaMass:171","Unimod:472#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)cysteine (Ser)","synonyms":[{"name":"AEC-MAEC","type":"related"},{"name":"Aminoethyl Cysteinyl (AECys)","type":"exact"},{"name":"aminoethylcysteine","type":"related"}],"termid":"MOD:00882"}


id: FYPO:0006313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which progression from meiotic G2 phase to M phase of meiosis I does not occur.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiotic G2/MI transition","synonyms":[{"name":"abolished G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abolished entry into meiosis","type":"related"}],"termid":"FYPO:0006313"}


id: PBO:0046883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A9, pseudogene","termid":"PBO:0046883"}


id: PBO:0082464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium and manganese transporter with higher affinity for Ca2+; involved in Ca2+ and Mn2+ homeostasis; localizes to the cis- and medial-Golgi apparatus; GFP-fusion localizes to the vacuole; required for the Mn2+-dependent function of glycosylation enzymes; TMEM165, a human ortholog linked to Congenital Disorders of Glycosylation, functionally complements the null allele; expression pattern and physical interactions suggest a possible role in ribosome biogenesis; expression regulated by Gcr1p","termid":"PBO:0082464"}


id: PBO:0067394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 499, pseudogene","termid":"PBO:0067394"}


id: PATO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An affinity inhering in a tissue constituent by virtue of the bearer exhibiting a molecular interaction for eosin dye.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophilic","termid":"PATO:0002419"}


id: GO:0015927
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of trehalose or a trehalose derivative.","definition_xrefs":["PMID:31925485","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"trehalase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015927","terms_by_termid":{"GO:0004555":null}}


id: PBO:0045681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 1","termid":"PBO:0045681"}


id: GO:0060346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula formation","synonyms":[{"name":"bone trabecula biogenesis","type":"related"},{"name":"bone trabeculation","type":"exact"},{"name":"skeletal trabecula biogenesis","type":"related"},{"name":"skeletal trabecula formation","type":"exact"},{"name":"skeletal trabeculation","type":"exact"}],"termid":"GO:0060346"}


id: PBO:0052089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 6","termid":"PBO:0052089"}


id: GO:0038057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor ligand superfamily member 11 (TNFSF11), a member of the tumor necrosis factor (TNF) cytokine family.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor binding","termid":"GO:0043120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"TNFSF11 binding","synonyms":[{"name":"CD254 binding","type":"exact"},{"name":"ODF binding","type":"exact"},{"name":"OPGL binding","type":"exact"},{"name":"RANKL binding","type":"exact"},{"name":"TNF-related activation-induced cytokine binding","type":"exact"},{"name":"TRANCE binding","type":"exact"},{"name":"osteoclast differentiation factor binding","type":"exact"},{"name":"osteoprotegerin ligand binding","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand binding","type":"exact"},{"name":"tumor necrosis factor (ligand) superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor superfamily member 11 binding","type":"exact"}],"termid":"GO:0038057"}


id: PBO:0049360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 19","termid":"PBO:0049360"}


id: FYPO:0007554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tolnaftate. Cells stop growing (and may die) at a concentration of tolnaftate that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tolnaftate","synonyms":[{"name":"hypersensitive to tolnaftate","type":"exact"},{"name":"sensitive to TFT","type":"exact"},{"name":"sensitive to tolnaftate during mitotic cell cycle","type":"related"},{"name":"sensitive to tolnaftate during vegetative growth","type":"exact"}],"termid":"FYPO:0007554"}


id: GO:0002504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex.","definition_xrefs":["GOC:add","PMID:16153240","ISBN:0781735149","PMID:15531770","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"peptide or polysaccharide antigen processing and presentation of via MHC class II","type":"exact"}],"termid":"GO:0002504"}


id: FYPO:0001543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phosphorus-containing substance measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphorus level","synonyms":[{"name":"normal cellular level of phosphorus-containing substance","type":"exact"},{"name":"normal cellular phosphorus accumulation","type":"related"},{"name":"normal cellular phosphorus level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphorus level during vegetative growth","type":"exact"}],"termid":"FYPO:0001543"}


id: PBO:0081708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 628","termid":"PBO:0081708"}


id: PBO:0080894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F3","termid":"PBO:0080894"}


id: PBO:0027911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_ionizing_radiation","termid":"PBO:0027911"}


id: PBO:0074206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 14","termid":"PBO:0074206"}


id: PBO:0083773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear envelope/ER integral membrane protein; interacts and functions with Apq12p and Brr6p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, mRNA nuclear export and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; identified as a dosage suppressor of a temperature sensitive mutation in the major karyopherin, CRM1; homologous to Brr6p","termid":"PBO:0083773"}


id: PBO:0052766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 58","termid":"PBO:0052766"}


id: GO:0103088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-8-methylthiooctanoate + acetyl-CoA + H2O = H+ + 2-(6'-methylthio)hexylmalate + coenzyme A.","definition_xrefs":["EC:2.3.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-(6'-methylthio)hexylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4172"],"termid":"GO:0103088"}


id: SO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Galactosyl_queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosyl_queuosine","secondary_identifiers":["RNAMOD:045"],"synonyms":[{"name":"galQ","type":"exact"},{"name":"galactosyl queuosine","type":"exact"},{"name":"galactosyl-queuosine","type":"exact"}],"termid":"SO:0001319"}


id: GO:0042307
data:
  {"annotated_genes":["SJAG_02592","SJAG_03453","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86935,90442,98436],"is_not":false,"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein import into nucleus","termid":"GO:0042306"},{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to nucleus","termid":"GO:1900182"},{"relation_name":"positively_regulates","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of protein import into nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein import into nucleus","type":"narrow"},{"name":"positive regulation of protein import into cell nucleus","type":"exact"},{"name":"positive regulation of protein transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of protein-nucleus import","type":"exact"},{"name":"stimulation of protein import into nucleus","type":"narrow"},{"name":"up regulation of protein import into nucleus","type":"exact"},{"name":"up-regulation of protein import into nucleus","type":"exact"},{"name":"upregulation of protein import into nucleus","type":"exact"}],"termid":"GO:0042307","terms_by_termid":{"GO:0042307":null}}


id: PBO:0005390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIP41-like type 2a phosphatase regulator Tip41","termid":"PBO:0005390"}


id: PBO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_sporulation","termid":"PBO:0030165"}


id: FYPO:0004829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased during a cellular response to adenine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased phosphatase activity during cellular response to adenine starvation","synonyms":[{"name":"decreased phosphatase activity during adenine starvation","type":"exact"},{"name":"reduced phosphatase activity during cellular response to adenine starvation","type":"exact"}],"termid":"FYPO:0004829"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04743","SJAG_04459","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98776,86123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"},{"annotations":[108819,99839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052851"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null,"GO:0052851":null}}


id: GO:0042100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division. Follows B cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation","secondary_identifiers":["GO:0042114"],"synonyms":[{"name":"B lymphocyte proliferation","type":"exact"},{"name":"B-cell proliferation","type":"exact"},{"name":"B-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042100"}


id: PBO:0087412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 2 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; phosphorylated; transcription is regulated by Hap1p, Hap2p/Hap3p, and heme","termid":"PBO:0087412"}


id: PBO:0067313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 399, pseudogene","termid":"PBO:0067313"}


id: PR:O74944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase kappa that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11076:SF12","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase kappa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.07c","secondary_identifiers":["UniProtKB:O74944"],"synonyms":[{"name":"SPCC553.07c","type":"related"},{"name":"Spom972h-POLK","type":"exact"},{"name":"meiotically up-regulated gene 40 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74944"}


id: GO:0043663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A symbiosome containing any of various structurally modified bacteria, such as those occurring on the root nodules of leguminous plants, of a host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host symbiosome","termid":"GO:0043658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: GO:0100058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates phenotypic switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100058)","termid":"GO:0100058"}


id: GO:1902555
data:
  {"annotated_genes":["SJAG_04582","SJAG_00306","SJAG_04916","SJAG_00955","SJAG_01581","SJAG_00754","SJAG_03796","SJAG_03952","SJAG_04252","SJAG_03234","SJAG_03425","SJAG_03789","SJAG_03328","SJAG_01551","SJAG_06613","SJAG_04062","SJAG_01260","SJAG_02374","SJAG_01369","SJAG_01623","SJAG_01056","SJAG_04907","SJAG_02275","SJAG_02553","SJAG_02547"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100157,87766,91023,114538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[90771,98102,87165,92852,109503,100801,114576,95537,111310,111395,100583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[100585,100803,101682,109506,111312,95539,101681,90774,87166,92562,111397,114577,92853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[90775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030677"},{"annotations":[110585,113185,100160,84894,114543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[97387,96851,101949,113673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endoribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endoribonuclease complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902555","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0030677":null,"GO:0090730":null,"GO:0120330":null}}


id: PBO:0025421
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Salla disease","termid":"PBO:0025421"}


id: GO:0019895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to mitochondria.","definition_xrefs":["PMID:12495622"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated mitochondrial adaptor activity (obsolete GO:0019895)","termid":"GO:0019895"}


id: GO:0106072
data:
  {"annotated_genes":["SJAG_02426","SJAG_02311","SJAG_01245","SJAG_00266","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112398],"is_not":false,"summary":null,"term":"GO:0106072"},{"annotations":[103991,88819,112399,88163,96490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:hjd","PMID:19246489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106070"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106072","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: FYPO:0005313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which maintenance of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Maintenance of mitotic sister chromatid cohesion is the process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the mitotic spindle, and congress to the metaphase plate.","definition_xrefs":["PomBase:mah","GO:0034088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"normal maintenance of mitotic chromosome cohesion","type":"exact"},{"name":"normal maintenance of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal maintenance of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005313"}


id: PBO:0090772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer alpha subunit Cop1","termid":"PBO:0090772"}


id: PBO:0059505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded cytochrome c oxidase I","termid":"PBO:0059505"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: GO:0008169
data:
  {"annotated_genes":["SJAG_01043","SJAG_03531","SJAG_03877","SJAG_02417","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008425"},{"annotations":[91688,109637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[100313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003838"},{"annotations":[111439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004851"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the carbon atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01043":null,"SJAG_01192":null,"SJAG_02417":null,"SJAG_03531":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"C-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008169","terms_by_termid":{"GO:0003838":null,"GO:0004851":null,"GO:0008425":null,"GO:0009383":null}}


id: PBO:0111833
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjC domain","termid":"PBO:0111833"}


id: PBO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 3","termid":"PBO:0001774"}


id: GO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of peptidyl-thyronine from peptidyl-tyrosine in thyroglobulin by phenyl transfer coupled with the formation of peptidyl-dehydroalanine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-thyronine biosynthetic process from peptidyl-tyrosine","synonyms":[{"name":"peptidyl-thyronine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0019879"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: GO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the stylet, a hollow protrusible spear-like structure in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from stylet (obsolete GO:0085003)","termid":"GO:0085003"}


id: GO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid membrane (obsolete GO:0031351)","synonyms":[{"name":"integral to plastid membrane","type":"narrow"}],"termid":"GO:0031351"}


id: PBO:0043492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 1","termid":"PBO:0043492"}


id: PBO:0028510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain","termid":"PBO:0028510"}


id: PBO:0078427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 4-1","termid":"PBO:0078427"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: RO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps the sequence of x if and only if x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps_sequence_of","termid":"RO:0002526"}


id: PBO:0055603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3041","termid":"PBO:0055603"}


id: PBO:0027378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_fragmented_nuclear_envelope_during_mitotic_telophase","termid":"PBO:0027378"}


id: PBO:0040296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase plasma membrane Ca2+ transporting 1","termid":"PBO:0040296"}


id: MOD:00108
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-tyrosine amide.","definition_xrefs":["PubMed:3562898","PubMed:6509012","PubMed:1377792","RESID:AA0099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine amide","synonyms":[{"name":"(2S)-2-amino-3-(4-hydoxyphenyl)propanamide","type":"exact"},{"name":"L-tyrosine amide","type":"exact"},{"name":"MOD_RES Tyrosine amide","type":"exact"},{"name":"TyrN","type":"exact"},{"name":"amidated L-tyrosine","type":"exact"},{"name":"tyrosinamide","type":"exact"}],"termid":"MOD:00108"}


id: PBO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 104 member A","termid":"PBO:0047038"}


id: PBO:0053403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 333","termid":"PBO:0053403"}


id: GO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.","definition_xrefs":["GOC:kad","EC:1.14.11.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin 3-beta-dioxygenase activity","secondary_identifiers":["MetaCyc:RXN1F-170","RHEA:10104"],"synonyms":[{"name":"(gibberellin-20),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"(gibberrellin-20),2-oxoglutarate: oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"gibberellin 3-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 3beta-dioxygenase activity","type":"related"},{"name":"gibberellin 3beta-hydroxylase activity","type":"related"}],"termid":"GO:0016707"}


id: PBO:0064823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3E","termid":"PBO:0064823"}


id: GO:0140789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphorylated histone + H2O = a protein + phosphate.","definition_xrefs":["PMID:19351884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016787","GO:0004721","GO:0140096","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"histone phosphatase activity","termid":"GO:0140789"}


id: PBO:0068146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 453","termid":"PBO:0068146"}


id: FYPO:0000239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription from MCB promoter","synonyms":[{"name":"expression of MBF target genes increased","type":"related"},{"name":"increased transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0000239"}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: PR:O74448
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04403","PANTHER:PTHR10657:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase pin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.03","secondary_identifiers":["UniProtKB:O74448"],"synonyms":[{"name":"PPIase pin1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIN1","type":"exact"}],"termid":"PR:O74448"}


id: GO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen samples carried out by M cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","PMID:11896763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by M cells in MALT","type":"exact"}],"termid":"GO:0002406"}


id: PBO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 34","termid":"PBO:0080069"}


id: GO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the R3/R4 photoreceptors commit to their cell fate. R3 and R4 are paired photoreceptors which contribute the outer rhabdomeres.","definition_xrefs":["PMID:3937883","PMID:3076112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor fate commitment","termid":"GO:0001752"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"R3/R4 cell fate commitment","termid":"GO:0007464"}


id: GO:0141114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host.","definition_xrefs":["PMID:25830295","PMID:20194595"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host complement activation (obsolete GO:0141114)","synonyms":[{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0141114"}


id: PBO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt1","termid":"PBO:0005745"}


id: PBO:0001665
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shwachman-Bodian-Diamond syndrome","termid":"PBO:0001665"}


id: GO:0004748
data:
  {"annotated_genes":["SJAG_04665","SJAG_02948","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70949],"is_not":false,"summary":null,"term":"GO:0004748"},{"annotations":[88512,103289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["EC:1.17.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016961","Reactome:R-HSA-111751","Reactome:R-HSA-111804","RHEA:23252","GO:0016960","GO:0016959","MetaCyc:RIBONUCLEOSIDE-DIP-REDUCTI-RXN"],"synonyms":[{"name":"2'-deoxyribonucleoside-diphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-diphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"}],"termid":"GO:0004748","terms_by_termid":{"GO:0004748":null,"GO:0051063":null}}


id: GO:0030354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of melanin-concentrating hormone, a cyclic peptide hormone that, upon receptor binding, induces melanin aggregation in melanocytes, and is also involved in regulating food intake and energy balance in mammals.","definition_xrefs":["PMID:11416225","GOC:mah","PMID:9792536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone activity","termid":"GO:0030354"}


id: PBO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 47","termid":"PBO:0050269"}


id: GO:0042710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["PMID:11932229","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggregation of unicellular organisms","termid":"GO:0098630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm formation","termid":"GO:0042710"}


id: PBO:0082226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0082226"}


id: PBO:0040962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 33","termid":"PBO:0040962"}


id: PBO:0066022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3","termid":"PBO:0066022"}


id: PBO:0043204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 1B","termid":"PBO:0043204"}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["PMID:8861902","PMID:9126742","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: PBO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_eisosome_filament","termid":"PBO:0030431"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: PBO:0041653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 3","termid":"PBO:0041653"}


id: GO:0048318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the axial mesoderm over time, from its formation to the mature structure. The axial mesoderm includes the prechordal mesoderm and the chordamesoderm. It gives rise to the prechordal plate and to the notochord.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm development","termid":"GO:0048318"}


id: PBO:0056296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 alpha","termid":"PBO:0056296"}


id: GO:0048662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation.","definition_xrefs":["CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell proliferation","termid":"GO:0048660"},{"relation_name":"negatively_regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of smooth muscle cell proliferation","synonyms":[{"name":"down regulation of smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048662"}


id: PBO:0066042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family pseudogene","termid":"PBO:0066042"}


id: PBO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confirmed intron","termid":"PBO:0006379"}


id: SO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of an SVA mobile element.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SVA_deletion","synonyms":[{"name":"SVA deletion","type":"exact"}],"termid":"SO:0002068"}


id: PR:Q9P7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx1 gene.","definition_xrefs":["UniProtKB:Q9P7M3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.15","synonyms":[{"name":"Spom972h-slx1","type":"exact"}],"termid":"PR:Q9P7M3"}


id: PBO:0086239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes primarily to the plasma membrane; also found at the nuclear envelope; long-lived protein that is asymmetrically retained in the plasma membrane of mother cells; the authentic, non-tagged protein is detected in mitochondria in a phosphorylated state; null mutation confers sensitivity to acetic acid","termid":"PBO:0086239"}


id: PBO:0058338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4712","termid":"PBO:0058338"}


id: GO:0060582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in commitment of a cell to a fate in a developmental field. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate determination involved in pattern specification","termid":"GO:0060582"}


id: GO:0103056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A53 + O2 + 2-oxoglutarate = gibberellin A44 diacid + carbon dioxide + succinate.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin A53, 2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN1F-167","RHEA:60800"],"termid":"GO:0103056"}


id: FYPO:0000124
data:
  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id: PBO:0064108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting","termid":"PBO:0064108"}


id: GO:0061984
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71005,102275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A process in which the presence of one nutrient source leads to a decrease in the frequency, rate, or extent of processes involved in the metabolism of other nutrient sources.","definition_xrefs":["PMID:29295552","GOC:dph","PMID:29197127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient","termid":"GO:0031670"},{"relation_name":"negatively_regulates","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catabolite repression","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061984","terms_by_termid":{"GO:0000433":null}}


id: PR:Q92354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2401 gene.","definition_xrefs":["UniProtKB:Q92354","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.09c","synonyms":[{"name":"Spom972h-rpl2401","type":"exact"}],"termid":"PR:Q92354"}


id: PBO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unmerged","termid":"PBO:0002035"}


id: PBO:0044084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A3","termid":"PBO:0044084"}


id: PBO:0042895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial development protein 1","termid":"PBO:0042895"}


id: PBO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_trimethylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0035817"}


id: PBO:0068386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF186 antisense RNA 1","termid":"PBO:0068386"}


id: GO:0035193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reorganization of the pre-existing, functional larval central nervous system into one that can serve the novel behavioral needs of the adult. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","PMID:9647692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval central nervous system remodeling","synonyms":[{"name":"CNS metamorphosis","type":"exact"},{"name":"central nervous system metamorphosis","type":"exact"},{"name":"larval central nervous system remodelling","type":"exact"}],"termid":"GO:0035193"}


id: PBO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member B","termid":"PBO:0043273"}


id: PBO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 2, pseudogene","termid":"PBO:0051402"}


id: GO:1904901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myosin II filament organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22761445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myosin II filament organization","termid":"GO:0043519"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of myosin II filament organization","synonyms":[{"name":"activation of myosin II filament assembly or disassembly","type":"related"},{"name":"activation of myosin II filament organisation","type":"narrow"},{"name":"activation of myosin II filament organization","type":"narrow"},{"name":"activation of myosin II polymerization or depolymerization","type":"related"},{"name":"positive regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"positive regulation of myosin II filament organisation","type":"exact"},{"name":"positive regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up regulation of myosin II filament organisation","type":"exact"},{"name":"up regulation of myosin II filament organization","type":"exact"},{"name":"up regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"up-regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"up-regulation of myosin II filament organisation","type":"exact"},{"name":"up-regulation of myosin II filament organization","type":"exact"},{"name":"up-regulation of myosin II polymerization or depolymerization","type":"related"},{"name":"upregulation of myosin II filament assembly or disassembly","type":"related"},{"name":"upregulation of myosin II filament organisation","type":"exact"},{"name":"upregulation of myosin II filament organization","type":"exact"},{"name":"upregulation of myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:1904901"}


id: GO:0080072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"spermidine:sinapoyl CoA N-acyltransferase activity","termid":"GO:0080072"}


id: PBO:0046909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member D1","termid":"PBO:0046909"}


id: PBO:0038691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 2","termid":"PBO:0038691"}


id: GO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule formation","termid":"GO:0072079"}


id: GO:0046653
data:
  {"annotated_genes":["SJAG_01766","SJAG_01616","SJAG_00106","SJAG_01198","SJAG_02225","SJAG_04156","SJAG_03275","SJAG_00815","SJAG_01126","SJAG_02408","SJAG_03712","SJAG_03914","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104367,108435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[86396,109699,100968,102106,110077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[100820,104369,94473,87380,92709,100625,90556,108438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0046653","terms_by_termid":{"GO:0009257":null,"GO:0035999":null,"GO:0046654":null}}


id: GO:0030933
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast ADPG pyrophosphorylase complex","termid":"GO:0030933"}


id: GO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + UDP-D-galactose = 3-[alpha-D-galactosyl-(1->6)-beta-D-galactosyl]-1,2-diacyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.241","RHEA:10520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"digalactosyldiacylglycerol synthase activity","secondary_identifiers":["KEGG_REACTION:R04469","MetaCyc:RXN-1225","Wikipedia:Digalactosyldiacylglycerol_synthase"],"synonyms":[{"name":"DGD1","type":"narrow"},{"name":"DGD2","type":"narrow"},{"name":"DGDG synthase activity","type":"broad"},{"name":"UDP-galactose-dependent DGDG synthase activity","type":"related"},{"name":"UDP-galactose-dependent digalactosyldiacylglycerol synthase activity","type":"related"},{"name":"UDP-galactose:3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol 6-alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:MGDG galactosyltransferase activity","type":"exact"}],"termid":"GO:0046481"}


id: PBO:0088810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, LARP1 family Slr1","termid":"PBO:0088810"}


id: GO:0070840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a dynein complex, a protein complex that contains two or three dynein heavy chains and several light chains, and has microtubule motor activity.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dynein complex binding","secondary_identifiers":["GO:0045502"],"synonyms":[{"name":"dynein binding","type":"related"}],"termid":"GO:0070840"}


id: PBO:0063589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 5","termid":"PBO:0063589"}


id: FYPO:0002584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is lower than normal. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature tRNA level during vegetative growth","termid":"FYPO:0002583"},{"relation_name":"is_a","term_name":"decreased mitochondrial RNA level","termid":"FYPO:0003423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature mitochondrial tRNA level","synonyms":[{"name":"decreased mature mitochondrial tRNA accumulation","type":"related"},{"name":"decreased mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"decreased mature mitochondrial tRNA transcript level","type":"exact"},{"name":"decreased mature mitochondrial transfer RNA level","type":"exact"},{"name":"decreased mitochondrial tRNA level","type":"broad"},{"name":"reduced mitochondrial tRNA level","type":"exact"}],"termid":"FYPO:0002584"}


id: PBO:0047458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ficolin 2","termid":"PBO:0047458"}


id: GO:0097280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Histamine release triggered by the binding of an antigen to an immunoglobulin bound to the cell surface.","definition_xrefs":["PMID:11490155","GOC:rv","GOC:add","PMID:1719184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"},{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"response to histamine","termid":"GO:0034776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"histamine secretion mediated by immunoglobulin","termid":"GO:0097280"}


id: GO:1904722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GOC:TermGenie","PMID:20625543","GOC:bf","GO_REF:0000058","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904722)","synonyms":[{"name":"activation of HAC1 mRNA cleavage","type":"narrow"},{"name":"activation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"activation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"activation of XBP1 mRNA cleavage","type":"narrow"},{"name":"activation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"narrow"},{"name":"positive regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"positive regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"positive regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"positive regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"up regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"up regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"up regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"up-regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"up-regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"up-regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"upregulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"upregulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"upregulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"upregulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"upregulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"}],"termid":"GO:1904722"}


id: PBO:0077341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 80","termid":"PBO:0077341"}


id: PBO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033747"}


id: PATO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of how long the bearer has existed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"time","termid":"PATO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age","termid":"PATO:0000011"}


id: PBO:0059419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 5","termid":"PBO:0059419"}


id: GO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity, activated by UDP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled pyrimidinergic nucleotide receptor activity","termid":"GO:0071553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled UDP receptor activity","synonyms":[{"name":"UDP-activated nucleotide receptor activity","type":"broad"}],"termid":"GO:0045029"}


id: PBO:0038440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoadipate aminotransferase","termid":"PBO:0038440"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["GOC:vw","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: PBO:0091190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe","termid":"PBO:0091190"}


id: GO:0045642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"positively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basophil differentiation","synonyms":[{"name":"activation of basophil differentiation","type":"narrow"},{"name":"stimulation of basophil differentiation","type":"narrow"},{"name":"up regulation of basophil differentiation","type":"exact"},{"name":"up-regulation of basophil differentiation","type":"exact"},{"name":"upregulation of basophil differentiation","type":"exact"}],"termid":"GO:0045642"}


id: GO:1905702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inhibitory synapse assembly.","definition_xrefs":["PMID:27779093","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"regulates","term_name":"inhibitory synapse assembly","termid":"GO:1904862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of inhibitory synapse assembly","synonyms":[{"name":"regulation of inhibitory synapse formation","type":"exact"}],"termid":"GO:1905702"}


id: PR:Q09818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mot2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription C16C9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.04c","synonyms":[{"name":"Spom972h-mot2","type":"exact"}],"termid":"PR:Q09818"}


id: GO:1901880
data:
  {"annotated_genes":["SJAG_00279","SJAG_01894","SJAG_02700","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88397,84372,94948,110335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein depolymerization.","definition_xrefs":["PMID:12032137","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"negatively_regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein depolymerization","type":"exact"},{"name":"down regulation of protein polymer breakdown","type":"exact"},{"name":"down regulation of protein polymer catabolic process","type":"exact"},{"name":"down regulation of protein polymer catabolism","type":"exact"},{"name":"down regulation of protein polymer degradation","type":"exact"},{"name":"down-regulation of protein depolymerization","type":"exact"},{"name":"down-regulation of protein polymer breakdown","type":"exact"},{"name":"down-regulation of protein polymer catabolic process","type":"exact"},{"name":"down-regulation of protein polymer catabolism","type":"exact"},{"name":"down-regulation of protein polymer degradation","type":"exact"},{"name":"downregulation of protein depolymerization","type":"exact"},{"name":"downregulation of protein polymer breakdown","type":"exact"},{"name":"downregulation of protein polymer catabolic process","type":"exact"},{"name":"downregulation of protein polymer catabolism","type":"exact"},{"name":"downregulation of protein polymer degradation","type":"exact"},{"name":"inhibition of protein depolymerization","type":"narrow"},{"name":"inhibition of protein polymer breakdown","type":"exact"},{"name":"inhibition of protein polymer catabolic process","type":"exact"},{"name":"inhibition of protein polymer catabolism","type":"exact"},{"name":"inhibition of protein polymer degradation","type":"exact"},{"name":"negative regulation of protein polymer breakdown","type":"exact"},{"name":"negative regulation of protein polymer catabolic process","type":"exact"},{"name":"negative regulation of protein polymer catabolism","type":"exact"},{"name":"negative regulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901880","terms_by_termid":{"GO:0051016":null}}


id: PBO:0029707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division","termid":"PBO:0029707"}


id: PBO:0083750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential conserved protein with a role in cell wall integrity; contains six TPR (tetratricopeptide repeat) domains clustered in the C-terminal region; conditional mutant is suppressed by overexpression of GFA1; protein abundance increases in response to DNA replication stress","termid":"PBO:0083750"}


id: PBO:0027699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_rDNA_separation","termid":"PBO:0027699"}


id: PR:Q10273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G7.09c gene.","definition_xrefs":["UniProtKB:Q10273","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.09c","synonyms":[{"name":"Spom972h-SPAC13G7.09c","type":"exact"}],"termid":"PR:Q10273"}


id: PR:O13851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.12","synonyms":[{"name":"Spom972h-dlp1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13851"}


id: GO:0016717
data:
  {"annotated_genes":["SJAG_03943","SJAG_01057","SJAG_03249","SJAG_05311","SJAG_03509","SJAG_00717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[85760,103558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[103559,85761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"},{"annotations":[108562,105737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042284"},{"annotations":[110420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water.","definition_xrefs":["EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01057":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03943":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016717","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0004768":null,"GO:0042284":null,"GO:0050046":null}}


id: GO:0070515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to talin.","definition_xrefs":["PMID:8663236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-talin complex","synonyms":[{"name":"ITGA2b-ITGB3-TLN1 complex","type":"narrow"}],"termid":"GO:0070515"}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: PBO:0045401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 3","termid":"PBO:0045401"}


id: PATO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the consistency of water.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"watery","termid":"PATO:0002408"}


id: PBO:0038924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G6","termid":"PBO:0038924"}


id: GO:0140052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidized lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","GOC:BHF","PMID:20037584","PMID:27607416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidised low-density lipoprotein particle stimulus","synonyms":[{"name":"cellular response to ox-LDL particle stimulus","type":"exact"},{"name":"cellular response to oxLDL particle stimulus","type":"exact"},{"name":"cellular response to oxidised LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized low-density lipoprotein particle stimulus","type":"exact"}],"termid":"GO:0140052"}


id: PR:O43000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- liz1 gene.","definition_xrefs":["UniProtKB:O43000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transporter liz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.01c","synonyms":[{"name":"Spom972h-liz1","type":"exact"}],"termid":"PR:O43000"}


id: PBO:0027908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_telomere_during_meiosis","termid":"PBO:0027908"}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: PBO:0053031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal protein transmembrane 4 beta pseudogene 2","termid":"PBO:0053031"}


id: PBO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-A family homolog Rhp14","termid":"PBO:0003236"}


id: PBO:0058336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4710","termid":"PBO:0058336"}


id: PATO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000780 relative locomotor activity value (obsolete PATO:0000780)","termid":"PATO:0000780"}


id: PBO:0040253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 9B","termid":"PBO:0040253"}


id: PATO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the front and the middle of an organism.","definition_xrefs":["PATOC:JI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteromedially rotated","termid":"PATO:0002399"}


id: PBO:0074005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 6","termid":"PBO:0074005"}


id: PBO:0051128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-5","termid":"PBO:0051128"}


id: PBO:0070930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 38","termid":"PBO:0070930"}


id: GO:0031656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of heat dissipation.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heat dissipation","termid":"GO:0031654"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"heat dissipation","termid":"GO:0031653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heat dissipation","synonyms":[{"name":"activation of heat dissipation","type":"narrow"},{"name":"stimulation of heat dissipation","type":"narrow"},{"name":"up regulation of heat dissipation","type":"exact"},{"name":"up-regulation of heat dissipation","type":"exact"},{"name":"upregulation of heat dissipation","type":"exact"}],"termid":"GO:0031656"}


id: GO:1903896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:22013210","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"positively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"activation of IRE1 branch of UPR","type":"narrow"},{"name":"activation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"activation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"activation of IRE1p unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"activation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"positive regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"positive regulation of IRE1 branch of UPR","type":"exact"},{"name":"positive regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"positive regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"positive regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"positive regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up regulation of IRE1 branch of UPR","type":"exact"},{"name":"up regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up-regulation of IRE1 branch of UPR","type":"exact"},{"name":"up-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"upregulation of IRE1 branch of UPR","type":"exact"},{"name":"upregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"upregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"upregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"upregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"upregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903896"}


id: GO:0002097
data:
  {"annotated_genes":["SJAG_03677","SJAG_02099","SJAG_01418","SJAG_00579","SJAG_04175","SJAG_04756","SJAG_00235","SJAG_00352","SJAG_03932","SJAG_04367","SJAG_00186","SJAG_03896","SJAG_03616","SJAG_00358","SJAG_02302","SJAG_05249","SJAG_01024","SJAG_05023","SJAG_01302","SJAG_04189","SJAG_04113","SJAG_04704","SJAG_04380","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90335,112969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104497,88867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[97163,100282,99996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"},{"annotations":[91532,105511,106176,96622,109998,114759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[89997,84379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[104432,113200,102902,92057,101882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"},{"annotations":[83910,92123,101585,114630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002098"}]},"cv_name":"biological_process","definition":"The process in which the nucleotide at position 34 in the anticodon of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00235":null,"SJAG_00352":null,"SJAG_00358":null,"SJAG_00579":null,"SJAG_01024":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null,"SJAG_04175":null,"SJAG_04189":null,"SJAG_04367":null,"SJAG_04380":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null,"SJAG_05023":null,"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA wobble base modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002097","terms_by_termid":{"GO:0002098":null,"GO:0002100":null,"GO:0002127":null,"GO:0002143":null,"GO:0002926":null,"GO:0070899":null,"GO:1990799":null}}


id: GO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of abscisic acid levels in host (obsolete GO:0075343)","termid":"GO:0075343"}


id: PBO:0038887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADCYAP receptor type I","termid":"PBO:0038887"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: GO:0036089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the cleavage furrow, a shallow groove in the cell surface near the old metaphase plate that marks the site of cytokinesis. This process includes the recruitment and localized activation of signals such as RhoA at the site of the future furrow to ensure that furrowing initiates at the correct site in the cell.","definition_xrefs":["GOC:ans","PMID:2192590","PMID:20687468","PMID:15811947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"cleavage furrow formation","synonyms":[{"name":"cleavage furrow positioning","type":"narrow"}],"termid":"GO:0036089"}


id: SO:1000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the insertion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000066 sequence_variant_causing_plus_1_frameshift_mutation (obsolete SO:1000066)","synonyms":[{"name":"plus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing plus 1 frameshift mutation","type":"exact"}],"termid":"SO:1000066"}


id: GO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete TTP reduction (obsolete GO:0006247)","synonyms":[{"name":"TTP reduction","type":"exact"}],"termid":"GO:0006247"}


id: GO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chitooligosaccharide with N-acetylglucosamine at nonreducing terminal + H2O = chitooligosaccharide with glucosamine at nonreducing terminal + acetate. This reaction is the deacetylation of a chitooligosaccharide at the nonreducing N-acetylglucosamine residue; chitooligosaccharide are composed of (1->4)-linked D-glucosamine (GlcN) and N-acetyl-D-glucosamine (GlcNAc) in varying proportions.","definition_xrefs":["PMID:8421697","GOC:mengo_curators","PMID:8986807"],"gene_count":0,"genotype_count":0,"name":"obsolete chitooligosaccharide deacetylase activity (obsolete GO:0052790)","termid":"GO:0052790"}


id: PR:O94335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02425","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.02","secondary_identifiers":["UniProtKB:O94335"],"synonyms":[{"name":"Spom972h-STT3B","type":"exact"},{"name":"oligosaccharyl transferase subunit stt3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94335"}


id: PBO:0087402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stretch-activated Ca2+-permeable cation channel; required for Ca2+ influx stimulated by mating pheromones and some abiotic stresses; sensor of compressive mechanical stress; N-glycosylated membrane protein of the ER and plasma membrane; interacts with Cch1p; oligomerizes; is an alpha2/delta-like protein and participates in the generation of stretch-activated Ca2+-permeable cation channel activity when expressed in mammalian cells","termid":"PBO:0087402"}


id: PBO:0061195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide transhydrogenase","termid":"PBO:0061195"}


id: GO:0008591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC).","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical Wnt signaling pathway","termid":"GO:2000050"},{"relation_name":"regulates","term_name":"Wnt signaling pathway, calcium modulating pathway","termid":"GO:0007223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway, calcium modulating pathway","synonyms":[{"name":"regulation of Wnt receptor signaling pathway, calcium modulating pathway","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway, calcium modulating pathway","type":"exact"},{"name":"regulation of frizzled-2 signaling pathway","type":"exact"},{"name":"regulation of frizzled-2 signalling pathway","type":"exact"}],"termid":"GO:0008591"}


id: PBO:0057854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3165","termid":"PBO:0057854"}


id: PR:Q9UT76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00681","PANTHER:PTHR10233:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.14c","secondary_identifiers":["UniProtKB:Q9UT76"],"synonyms":[{"name":"Spom972h-EIF2B2","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT76"}


id: PATO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000996 absolute viscosity value (obsolete PATO:0000996)","termid":"PATO:0000996"}


id: PBO:0054718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2127","termid":"PBO:0054718"}


id: PBO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle checkpoint protein Mad2","termid":"PBO:0004446"}


id: GO:0070664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of leukocyte proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"negatively_regulates","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte proliferation","synonyms":[{"name":"down regulation of leukocyte proliferation","type":"exact"},{"name":"down-regulation of leukocyte proliferation","type":"exact"},{"name":"downregulation of leukocyte proliferation","type":"exact"},{"name":"inhibition of leukocyte proliferation","type":"narrow"}],"termid":"GO:0070664"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: GO:0009418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The long, slender, mid section of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus shaft","synonyms":[{"name":"fimbrial shaft","type":"exact"}],"termid":"GO:0009418"}


id: MOD:00438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a myristoyl group.","definition_xrefs":["Unimod:45","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"myristoylated residue","synonyms":[{"name":"C14:0 aliphatic acylated residue","type":"exact"},{"name":"MyrRes","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"exact"}],"termid":"MOD:00438"}


id: PBO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 21","termid":"PBO:0072302"}


id: FYPO:0003104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is greater than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased mRNA-derived small RNA level","synonyms":[{"name":"increased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"increased mRNA-derived small RNA accumulation","type":"related"},{"name":"increased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"increased mRNA-derived small transcript level","type":"exact"},{"name":"increased protein-coding gene-derived small RNA level","type":"related"}],"termid":"FYPO:0003104"}


id: PBO:0091027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex Rab GEF subunit Vam6","termid":"PBO:0091027"}


id: PBO:0068622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 2","termid":"PBO:0068622"}


id: PBO:0002526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B box","termid":"PBO:0002526"}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: FYPO:0002497
data:
  {"alleles_by_uniquename":{"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification does not occur. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein modification","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abolished protein/peptide modification","type":"exact"},{"name":"absent protein/peptide modification","type":"exact"},{"name":"protein modification abolished","type":"exact"},{"name":"protein/peptide modification: absent","type":"related"}],"termid":"FYPO:0002497","terms_by_termid":{"FYPO:0002033":null}}


id: GO:0140292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + ADP-ribose.","definition_xrefs":["PMID:29234005","PMID:28650317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ADP-ribosylserine hydrolase activity","termid":"GO:0140292"}


id: FYPO:0003810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which  mitochondria are smaller and more numerous than normal. Total mitochondrial volume is usually similar to normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"has_part","term_name":"mitochondria present in increased numbers","termid":"FYPO:0007194"},{"relation_name":"has_part","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"},{"relation_name":"is_a","term_name":"small fragmented mitochondria","termid":"FYPO:0007193"},{"relation_name":"is_a","term_name":"normal mitochondrial volume","termid":"FYPO:0007210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"small fragmented mitochondria present in increased numbers","synonyms":[{"name":"fragmented mitochondria","type":"related"},{"name":"small mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"small mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003810"}


id: GO:0016734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8 reduced ferredoxin + 8 H+ + N2 + 16 ATP = 8 oxidized ferredoxin + 2 NH3 + 16 ADP + 16 phosphate.","definition_xrefs":["EC:1.18.6.1"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum-iron nitrogenase activity (obsolete GO:0016734)","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"exact"}],"termid":"GO:0016734"}


id: PBO:0048317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 28","termid":"PBO:0048317"}


id: PBO:0068327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 32","termid":"PBO:0068327"}


id: PBO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_triage_status","termid":"PBO:0034029"}


id: GO:0021573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 7 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:curators","GOC:cls","GOC:jid","GOC:dph","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 development","termid":"GO:0021573"}


id: PBO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 10","termid":"PBO:0061627"}


id: GO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA1-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071091"}


id: GO:0021797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of specific areas of progenitor domains along the anterior-posterior axis of the developing forebrain.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain anterior/posterior pattern specification","synonyms":[{"name":"forebrain anterior-posterior pattern specification","type":"exact"}],"termid":"GO:0021797"}


id: FYPO:0002034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA topoisomerase type I activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal DNA topoisomerase type I activity","termid":"FYPO:0002034"}


id: GO:1903067
data:
  {"annotated_genes":["SJAG_02392","SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87046,91917],"is_not":false,"summary":null,"term":"GO:1903067"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell tip.","definition_xrefs":["GO_REF:0000058","PMID:24554432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01373":null,"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to cell tip","type":"exact"},{"name":"down regulation of protein localization to cell tip","type":"exact"},{"name":"down-regulation of protein localisation to cell tip","type":"exact"},{"name":"down-regulation of protein localization to cell tip","type":"exact"},{"name":"downregulation of protein localisation to cell tip","type":"exact"},{"name":"downregulation of protein localization to cell tip","type":"exact"},{"name":"inhibition of protein localisation to cell tip","type":"narrow"},{"name":"inhibition of protein localization to cell tip","type":"narrow"},{"name":"negative regulation of protein localisation to cell tip","type":"exact"}],"termid":"GO:1903067","terms_by_termid":{"GO:1903067":null}}


id: FYECO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NADP+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NADP+","termid":"FYECO:0000075"}


id: PBO:0075767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrate, RNA effector molecule","termid":"PBO:0075767"}


id: GO:0043216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + daunorubicin(in) = ADP + phosphate + daunorubicin(out).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled daunorubicin transmembrane transporter activity (obsolete GO:0043216)","secondary_identifiers":["RHEA:33147"],"synonyms":[{"name":"ATP-dependent daunorubicin transmembrane transporter activity","type":"exact"},{"name":"daunorubicin ABC transporter","type":"narrow"},{"name":"daunorubicin-transporting ATPase activity","type":"exact"}],"termid":"GO:0043216"}


id: GO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + ATP = D-ribose 1,5-diphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:21216","EC:2.7.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"phosphoribokinase activity","secondary_identifiers":["KEGG_REACTION:R01050","MetaCyc:PHOSPHORIBOKINASE-RXN"],"synonyms":[{"name":"ATP:D-ribose-5-phosphate 1-phosphotransferase activity","type":"related"},{"name":"phosphoribokinase (phosphorylating)","type":"related"}],"termid":"GO:0050195"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94588],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["EC:2.1.1.10","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN","RHEA:21820"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: PBO:0068256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 3","termid":"PBO:0068256"}


id: GO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of salicylic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salicylic acid metabolic process","termid":"GO:0010337"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"salicylic acid biosynthetic process","termid":"GO:0009697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of salicylic acid biosynthetic process","termid":"GO:0080142"}


id: GO:0035169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized larval lymph gland-derived hemocyte precursor cell acquires the specialized features of the phagocytic blood-cell type, the plasmatocyte.","definition_xrefs":["PMID:8174791","GOC:bf","PMID:11921077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval lymph gland hemocyte differentiation","termid":"GO:0035168"},{"relation_name":"is_a","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph gland plasmatocyte differentiation","synonyms":[{"name":"lymph gland plasmatocyte cell differentiation","type":"exact"}],"termid":"GO:0035169"}


id: GO:0045988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle contraction","termid":"GO:0006942"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"negatively_regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle contraction","synonyms":[{"name":"down regulation of striated muscle contraction","type":"exact"},{"name":"down-regulation of striated muscle contraction","type":"exact"},{"name":"downregulation of striated muscle contraction","type":"exact"},{"name":"inhibition of striated muscle contraction","type":"narrow"}],"termid":"GO:0045988"}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: PBO:0089511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyltransferase","termid":"PBO:0089511"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: PBO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 3","termid":"PBO:0046092"}


id: PBO:0035843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aggregated_filamentous_actin_in_cytoplasm","termid":"PBO:0035843"}


id: PBO:0038417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_anatomical_participant","termid":"PBO:0038417"}


id: PBO:0076653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 10","termid":"PBO:0076653"}


id: PBO:0058057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4278","termid":"PBO:0058057"}


id: PBO:0090334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane guanine and adenine transmembrane transporter","termid":"PBO:0090334"}


id: PATO:0001487
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A time quality inhering in a bearer by virtue of the bearer's growing old; aging.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescent","termid":"PATO:0001487"}


id: PBO:0031099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_M_phase","termid":"PBO:0031099"}


id: PBO:0057338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 524","termid":"PBO:0057338"}


id: GO:0033705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-mannose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-mannose + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose reductase activity","secondary_identifiers":["MetaCyc:GDP-4-DEHYDRO-D-RHAMNOSE-REDUCTASE-RXN"],"synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose reductase activity","type":"broad"},{"name":"GDP-6-deoxy-D-lyxo-4-hexulose reductase activity","type":"related"},{"name":"GDP-6-deoxy-D-mannose:NAD(P)+ 4-oxidoreductase (D-rhamnose-forming) activity","type":"related"},{"name":"Rmd","type":"related"}],"termid":"GO:0033705"}


id: PBO:0017643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketoreductase involved in fatty acid elongation (predicted)","termid":"PBO:0017643"}


id: PBO:0047766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL1 pseudogene 1","termid":"PBO:0047766"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: FYPO:0001264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the establishment or maintenance of cell polarity is abnormal during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell polarity","termid":"FYPO:0000026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0005568","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell polarity during cellular hyperosmotic response","synonyms":[{"name":"abnormal cell polarity during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"abnormal cell polarity during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"abnormal establishment or maintenance of cell polarity during cellular hyperosmotic response","type":"exact"},{"name":"cell polarity defects during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001264"}


id: PBO:0041598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 9","termid":"PBO:0041598"}


id: GO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between or within protein chains.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide cross-linking","termid":"GO:0018149"}


id: GO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.","definition_xrefs":["PMID:22155109","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of endothelial barrier","termid":"GO:0061028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of endothelial intestinal barrier","termid":"GO:0090557"}


id: GO:0005177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of ligands for neurexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroligin (obsolete GO:0005177)","synonyms":[{"name":"neuroligin","type":"exact"}],"termid":"GO:0005177"}


id: PBO:0065971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD52 homolog, DNA repair protein","termid":"PBO:0065971"}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: GO:0051274
data:
  {"annotated_genes":["SJAG_02590","SJAG_02446","SJAG_04483","SJAG_01835","SJAG_04668","SJAG_01288","SJAG_00771","SJAG_04073","SJAG_00876","SJAG_00218","SJAG_02222","SJAG_03587","SJAG_04462","SJAG_01787","SJAG_04771","SJAG_05285","SJAG_01290","SJAG_03123","SJAG_04509","SJAG_00610","SJAG_03705","SJAG_01453","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87668],"is_not":false,"summary":null,"term":"GO:0051274"},{"annotations":[86684,112564,90285,98505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[90533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87669,105323,109187,87659,103804,84184,102126,111828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98687,104633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[88488],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83632,88492],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[84011],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[88477,101371,86859,88494,113897,98893],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-glucans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00771":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan anabolism","type":"exact"},{"name":"beta-glucan biosynthesis","type":"exact"},{"name":"beta-glucan formation","type":"exact"},{"name":"beta-glucan synthesis","type":"exact"}],"termid":"GO:0051274","terms_by_termid":{"GO:0006078":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0051274":null,"GO:0060635":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0027889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027889"}


id: PR:O94289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin homeostasis protein lub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.04c","synonyms":[{"name":"Spom972h-lub1","type":"exact"}],"termid":"PR:O94289"}


id: GO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-L-2,6-diaminoheptanedioate + 2-oxoglutarate = N-acetyl-2-L-amino-6-oxoheptanedioate + L-glutamate.","definition_xrefs":["PMID:1906065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"acetyldiaminopimelate aminotransferase activity","synonyms":[{"name":"N-acetyl-L,L-diaminopimelate aminotransferase activity","type":"exact"},{"name":"N-acetyl-diaminopimelate aminotransferase activity","type":"exact"}],"termid":"GO:0043760"}


id: PBO:0064934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPT2-EGFL8 readthrough (NMD candidate)","termid":"PBO:0064934"}


id: PBO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of the Ras1-Byr2 signalling pathway, acting downstream of Ras1 and upstream of Byr2","termid":"PBO:0002122"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: GO:0039635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["GOC:bm","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression by virus of host cell wall biogenesis","termid":"GO:0039636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host peptidoglycan biosynthetic process","synonyms":[{"name":"viral inhibition of host peptidoglycan biosynthesis","type":"related"}],"termid":"GO:0039635"}


id: PBO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 9","termid":"PBO:0060275"}


id: PBO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seh1-associated complex subunity Seh1","termid":"PBO:0014249"}


id: PBO:0089936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z Pht1","termid":"PBO:0089936"}


id: FYPO:0007750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle","termid":"FYPO:0007866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"normal protein localisation to spindle during meiosis I","type":"exact"},{"name":"normal protein localization to meiosis I spindle","type":"exact"},{"name":"normal protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007750"}


id: PBO:0109395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 23","termid":"PBO:0109395"}


id: MOD:00545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant with MOD:00927. Remap to MOD:00927.","definition_xrefs":["PubMed:14670044"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00545 deuterated dimethyl labeling (D) (obsolete MOD:00545)","termid":"MOD:00545"}


id: GO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-glutamyl cysteine + hercynine + O2 = gamma-glutamyl-hercynyl cysteine sulfoxide + H2O.","definition_xrefs":["RHEA:42672","GOC:jl","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gamma-glutamyl hercynylcysteine sulfoxide synthase activity","secondary_identifiers":["EC:1.14.99.50"],"synonyms":[{"name":"gamma-glutamyl hercynylcysteine S-oxide synthase","type":"exact"},{"name":"gamma-glutamyl hercynylcysteine sulfoxide synthase","type":"exact"}],"termid":"GO:0044875"}


id: PBO:0088475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery anamorsin Dre2","termid":"PBO:0088475"}


id: FYPO:0002548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4'-phosphopantothenate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 4'-phosphopantothenate level","synonyms":[{"name":"increased 4'-phosphopantothenate accumulation","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 4'-phosphopantothenate level during vegetative growth","type":"exact"}],"termid":"FYPO:0002548"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["WB_REF:cgc467","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0060803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6 pseudogene 1","termid":"PBO:0060803"}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: PBO:0057668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260a","termid":"PBO:0057668"}


id: PATO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000540 flooding sensitivity value (obsolete PATO:0000540)","termid":"PATO:0000540"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","RESID:AA0481","PubMed:8557573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: PBO:0085227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of a Vps34p phosphatidylinositol 3-kinase complex; functions in carboxypeptidase Y (CPY) sorting; binds Vps30p and Vps34p to promote production of phosphatidylinositol 3-phosphate (PtdIns3P) which stimulates kinase activity; required for overflow degradation of misfolded proteins when ERAD is saturated","termid":"PBO:0085227"}


id: PBO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_S-phase_DNA_damage_checkpoint","termid":"PBO:0031419"}


id: GO:1903656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25049409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of type IV pilus biogenesis","synonyms":[{"name":"regulation of TFP biogenesis","type":"exact"},{"name":"regulation of type 4 pilus biogenesis","type":"exact"},{"name":"regulation of type IV fimbria assembly","type":"exact"},{"name":"regulation of type IV fimbria biogenesis","type":"exact"},{"name":"regulation of type IV fimbriae assembly","type":"exact"},{"name":"regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"regulation of type IV fimbrial assembly","type":"exact"},{"name":"regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"regulation of type IV fimbrium assembly","type":"exact"},{"name":"regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903656"}


id: GO:1905186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metaphase/anaphase transition of meiosis I.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of meiosis I","termid":"GO:1990949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"regulation of first meiotic metaphase/anaphase transition","type":"related"},{"name":"regulation of meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905186"}


id: PBO:0054924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2338","termid":"PBO:0054924"}


id: PR:O94628
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.09 gene.","definition_xrefs":["UniProtKB:O94628","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1347.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.09","synonyms":[{"name":"Spom972h-SPBC1347.09","type":"exact"}],"termid":"PR:O94628"}


id: GO:0010629
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id: GO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male gamete generation","termid":"GO:0048232"}


id: SO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized by reverse transcriptase using RNA as a template.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cDNA","secondary_identifiers":["http://en.wikipedia.org/wiki/CDNA"],"synonyms":[{"name":"complementary DNA","type":"exact"}],"termid":"SO:0000756"}


id: GO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G1 phase","secondary_identifiers":["Wikipedia:G1_phase"],"termid":"GO:0051318"}


id: FYPO:0001593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal valine import","termid":"FYPO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased valine import","synonyms":[{"name":"decreased L-valine import","type":"exact"},{"name":"decreased L-valine import across plasma membrane","type":"exact"},{"name":"decreased valine import during mitotic cell cycle","type":"related"},{"name":"decreased valine import during vegetative growth","type":"exact"},{"name":"decreased valine import into cell","type":"exact"},{"name":"decreased valine uptake","type":"exact"},{"name":"reduced valine import","type":"exact"}],"termid":"FYPO:0001593"}


id: PBO:0059719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 27","termid":"PBO:0059719"}


id: GO:0008875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gluconate dehydrogenase activity","termid":"GO:0008875"}


id: GO:1900729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17157995","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opioid receptor signaling pathway","termid":"GO:2000474"},{"relation_name":"regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor","type":"related"},{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor signaling pathway","type":"related"},{"name":"regulation of inhibition of adenylate cyclase activity by opioid receptor signalling pathway","type":"related"},{"name":"regulation of opioid receptor-mediated adenylate cyclase inhibition","type":"related"}],"termid":"GO:1900729"}


id: GO:0019696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form toluene-cis-1,2-dihydrodiol.","definition_xrefs":["MetaCyc:TOLUENE-DEG-DIOL-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via toluene-cis-1,2-dihydrodiol","termid":"GO:0019696"}


id: PBO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 4","termid":"PBO:0071866"}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: GO:0140822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-35 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:32822587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"NAD+-histone H2BE35 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E35 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E35 specific)","type":"exact"}],"termid":"GO:0140822"}


id: GO:0099152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of neurotransmitter receptor from the postsynaptic endosome to the postsynaptic membrane in transport vesicles.","definition_xrefs":["PMID:20098723","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"is_a","term_name":"regulation of protein localization to synapse","termid":"GO:1902473"},{"relation_name":"is_a","term_name":"regulation of receptor localization to synapse","termid":"GO:1902683"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"regulates","term_name":"neurotransmitter receptor transport, endosome to postsynaptic membrane","termid":"GO:0098887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane","termid":"GO:0099152"}


id: PBO:0078111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-1","termid":"PBO:0078111"}


id: PBO:0067919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 221","termid":"PBO:0067919"}


id: PBO:0045633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 45 (pseudogene)","termid":"PBO:0045633"}


id: PBO:0078228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-3","termid":"PBO:0078228"}


id: RO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  regulates the kinase activity (P2) of protein B then P1 directly regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","termid":"RO:0002578"}


id: GO:1905613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["PMID:11606552","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental vegetative growth","termid":"GO:1905613"}


id: PBO:0034314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_bound_by_sequence_of","termid":"PBO:0034314"}


id: GO:1904896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT complex into its constituent components.","definition_xrefs":["PMID:21118109","GOC:PARL","GOC:TermGenie","GO_REF:0000079","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT complex disassembly","synonyms":[{"name":"endosomal sorting complex required for transport disassembly","type":"exact"}],"termid":"GO:1904896"}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: PBO:0038475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 13","termid":"PBO:0038475"}


id: PBO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 2","termid":"PBO:0047969"}


id: PR:Q10187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp6 gene.","definition_xrefs":["UniProtKB:Q10187","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.13","synonyms":[{"name":"Spom972h-ucp6","type":"exact"}],"termid":"PR:Q10187"}


id: PBO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst2","termid":"PBO:0001381"}


id: PBO:0080229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K epoxide reductase complex subunit 1 like 1","termid":"PBO:0080229"}


id: GO:2001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-tagatose 6-phosphate metabolic process","termid":"GO:2001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate catabolic process","secondary_identifiers":["UniPathway:UPA00704"],"synonyms":[{"name":"D-tagatose 6-phosphate catabolism","type":"exact"}],"termid":"GO:2001059"}


id: GO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NADP+ + H2O = 2-oxoglutarate + NADPH + H+.","definition_xrefs":["EC:1.2.1.26","MetaCyc:25-DIOXOVALERATE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11296"],"synonyms":[{"name":"2,5-dioxopentanoate:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-ketoglutaric semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047533"}


id: PBO:0086051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function required for growth on ethanol; contains a zinc finger region and has homology to human BRAP2, which is a cytoplasmic protein that binds nuclear localization sequences","termid":"PBO:0086051"}


id: GO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene biosynthetic process","secondary_identifiers":["Wikipedia:Leukotriene#Leukotriene_synthesis"],"synonyms":[{"name":"leukotriene anabolism","type":"exact"},{"name":"leukotriene biosynthesis","type":"exact"},{"name":"leukotriene formation","type":"exact"},{"name":"leukotriene synthesis","type":"exact"}],"termid":"GO:0019370"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: GO:1900397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"regulates","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of pyrimidine nucleotide biosynthetic process","synonyms":[{"name":"regulation of pyrimidine nucleotide anabolism","type":"exact"},{"name":"regulation of pyrimidine nucleotide biosynthesis","type":"exact"},{"name":"regulation of pyrimidine nucleotide formation","type":"exact"},{"name":"regulation of pyrimidine nucleotide synthesis","type":"exact"}],"termid":"GO:1900397"}


id: SO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base pairing, most commonly between G and U, which is important for the secondary structure of RNAs. It has similar thermodynamic stability to the Watson-Crick pairing. Wobble base pairs only have two hydrogen bonds. Other wobble base pair possibilities are I-A, I-U and I-C.","definition_xrefs":["PMID:11256617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wobble_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Wobble_base_pair"],"synonyms":[{"name":"wobble base pair","type":"exact"},{"name":"wobble pair","type":"exact"}],"termid":"SO:0001015"}


id: PBO:0086946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway; delivers cargo proteins aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p) to the phagophore assembly site for packaging into Cvt vesicles; interaction with Atg19p during the Cvt pathway requires phosphorylation by Hrr25p","termid":"PBO:0086946"}


id: PBO:0049349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 7","termid":"PBO:0049349"}


id: FYPO:0003379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiosis II","synonyms":[{"name":"abolished second meiotic nuclear division","type":"exact"},{"name":"absent meiosis II","type":"exact"},{"name":"meiosis II abolished","type":"exact"},{"name":"meiosis II: absent","type":"exact"}],"termid":"FYPO:0003379"}


id: FYPO:0006747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal, distal to the side of the nucleus near the old cell end.","definition_xrefs":["PomBase:mah","PMID:8876193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric mitochondrial aggregation","termid":"FYPO:0003811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"asymmetric mitochondrial aggregation at old end","synonyms":[{"name":"asymmetric mitochondrial aggregation at old cell end","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old cell tip","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old end during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial aggregation at old end during vegetative growth","type":"exact"},{"name":"mitochondria localized to one cell end","type":"related"},{"name":"monopolar intracellular mitochondrion distribution","type":"related"},{"name":"monopolar intracellular mitochondrion localisation","type":"related"},{"name":"monopolar intracellular mitochondrion localization","type":"related"},{"name":"monopolar mitochondrial aggregation","type":"related"},{"name":"monopolar mitochondrion distribution","type":"related"}],"termid":"FYPO:0006747"}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: PBO:0061752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2","termid":"PBO:0061752"}


id: PBO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein (predicted)","termid":"PBO:0004346"}


id: PBO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3M pseudogene 1","termid":"PBO:0046074"}


id: GO:2000408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell extravasation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular extravasation","termid":"GO:0002692"},{"relation_name":"is_a","term_name":"negative regulation of T cell migration","termid":"GO:2000405"},{"relation_name":"is_a","term_name":"regulation of T cell extravasation","termid":"GO:2000407"},{"relation_name":"negatively_regulates","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell extravasation","synonyms":[{"name":"negative regulation of T lymphocyte extravasation","type":"exact"},{"name":"negative regulation of T-cell extravasation","type":"exact"},{"name":"negative regulation of T-lymphocyte extravasation","type":"exact"}],"termid":"GO:2000408"}


id: PBO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1","termid":"PBO:0034805"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: GO:1903419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cortical endoplasmic reticulum.","definition_xrefs":["PMID:25103238","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum tubular network","termid":"GO:1903420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to cortical endoplasmic reticulum","synonyms":[{"name":"protein localisation in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localisation to cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization to cortical ER","type":"exact"}],"termid":"GO:1903419"}


id: _global:sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_of","termid":"_global:sequence_of"}


id: GO:1902912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of pyruvate kinase activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088","PMID:24606918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pyruvate kinase complex","termid":"GO:1902912"}


id: PBO:0075385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp1 transcription factor","termid":"PBO:0075385"}


id: GO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"M-CSF receptor binding","type":"exact"},{"name":"macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005157"}


id: GO:0009167
data:
  {"annotated_genes":["SJAG_01859","SJAG_00044","SJAG_06634","SJAG_02850","SJAG_01081","SJAG_01814","SJAG_04634","SJAG_02038","SJAG_00964","SJAG_01070","SJAG_02364","SJAG_01661","SJAG_03140","SJAG_04849","SJAG_01298","SJAG_04123","SJAG_03355","SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99472,84986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[95620,93871,106379,113354,110517,99473,106268,114960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[97860,94195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[89602,112853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59023,97241,104294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[63701,98287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[89822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[114961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[84989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[89824,97861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[89826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate metabolic process","termid":"GO:0009161"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009167","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null}}


id: GO:0061977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of hip joint articular cartilage over time, from its formation to the mature structure.","definition_xrefs":["PMID:20097540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"articular cartilage development","termid":"GO:0061975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hip joint articular cartilage development","termid":"GO:0061977"}


id: PBO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6C","termid":"PBO:0052629"}


id: PBO:0089712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase Msf1","termid":"PBO:0089712"}


id: PBO:0038458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adeno-associated virus integration site 1","termid":"PBO:0038458"}


id: RO:HOM0000004
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves different underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_convergence_relationship_with","synonyms":[{"name":"analogy","type":"related"}],"termid":"RO:HOM0000004"}


id: GO:0060270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The ovarian follicle cell migration process in which follicle cells migrate posteriorly to form a columnar epithelium over the oocyte.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicle cell of egg chamber migration","termid":"GO:0007297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"main body follicle cell migration","termid":"GO:0060270"}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: GO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"regulation of FGF receptor signaling pathway","type":"exact"},{"name":"regulation of FGF receptor signalling pathway","type":"exact"},{"name":"regulation of FGFR signaling pathway","type":"exact"}],"termid":"GO:0040036"}


id: PBO:0077878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid peroxidase","termid":"PBO:0077878"}


id: PBO:0060697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 5","termid":"PBO:0060697"}


id: GO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisophthalic acid = salicylate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisophthalate decarboxylase activity (obsolete GO:0034524)","termid":"GO:0034524"}


id: GO:0019219
data:
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id: PBO:0059301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49","termid":"PBO:0059301"}


id: GO:0055016
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta.","definition_xrefs":["GOC:lb","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypochord development","synonyms":[{"name":"subnotochordal rod development","type":"exact"}],"termid":"GO:0055016"}


id: PBO:0031879
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycine transporter Hem25 (predicted)","termid":"PBO:0031879"}


id: GO:0072029
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend into the inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long nephron development","synonyms":[{"name":"juxtamedullary nephron development","type":"related"}],"termid":"GO:0072029"}


id: PBO:0043485
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabinoid receptor interacting protein 1","termid":"PBO:0043485"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: GO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 850 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:kd","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"B800-850 antenna complex","synonyms":[{"name":"LH2 complex","type":"exact"},{"name":"light harvesting complex II","type":"exact"}],"termid":"GO:0030082"}


id: PBO:0047065
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member B","termid":"PBO:0047065"}


id: PBO:0002720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn1","termid":"PBO:0002720"}


id: GO:1905589
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  {"annotated_genes":["SJAG_00991","SJAG_02605","SJAG_03591","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87815,89392,94929,106561],"is_not":false,"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"positively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902828","GO:1901042"],"synonyms":[{"name":"activation of L-arginine import","type":"narrow"},{"name":"activation of L-arginine import across plasma membrane","type":"narrow"},{"name":"activation of L-arginine import into cell","type":"narrow"},{"name":"activation of L-arginine uptake","type":"exact"},{"name":"positive regulation of L-arginine import","type":"broad"},{"name":"positive regulation of L-arginine import into cell","type":"exact"},{"name":"positive regulation of L-arginine uptake","type":"exact"},{"name":"up regulation of L-arginine import","type":"exact"},{"name":"up regulation of L-arginine uptake","type":"exact"},{"name":"up-regulation of L-arginine import","type":"exact"},{"name":"up-regulation of L-arginine import into cell","type":"exact"},{"name":"up-regulation of L-arginine uptake","type":"exact"},{"name":"upregulation of L-arginine import","type":"exact"},{"name":"upregulation of L-arginine import into cell","type":"exact"},{"name":"upregulation of L-arginine uptake","type":"exact"}],"termid":"GO:1905589","terms_by_termid":{"GO:1905589":null}}


id: GO:0047643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-mannuronate + alginate(n) = GDP + alginate(n+1).","definition_xrefs":["MetaCyc:ALGINATE-SYNTHASE-RXN","EC:2.4.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alginate synthase activity","secondary_identifiers":["RHEA:46876"],"synonyms":[{"name":"GDP-D-mannuronate:alginate D-mannuronyltransferase activity","type":"related"},{"name":"mannuronosyl transferase activity","type":"related"}],"termid":"GO:0047643"}


id: PBO:0041559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 53","termid":"PBO:0041559"}


id: PBO:0049686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine ammonia-lyase","termid":"PBO:0049686"}


id: PBO:0062874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase with linear linkage specificity","termid":"PBO:0062874"}


id: GO:1905383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynapse.","definition_xrefs":["PMID:24449494","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynapse","synonyms":[{"name":"protein localisation in presynapse","type":"exact"},{"name":"protein localisation to presynapse","type":"exact"},{"name":"protein localization in presynapse","type":"exact"},{"name":"recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905383"}


id: GO:0035655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-18 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-18","termid":"GO:0071351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-18-mediated signaling pathway","synonyms":[{"name":"interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:0035655"}


id: GO:0044456
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete synapse part (obsolete GO:0044456)","secondary_identifiers":["NIF_Subcellular:sao1784069613"],"synonyms":[{"name":"synaptic component","type":"related"}],"termid":"GO:0044456"}


id: GO:0102520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H2O = L-threonine + hydrogenphosphate.","definition_xrefs":["EC:3.1.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"L-threonine O-3-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14505"],"termid":"GO:0102520"}


id: PBO:0088102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ureidoglycolate lyase; converts ureidoglycolate to glyoxylate and urea in the third step of allantoin degradation; expression is sensitive to nitrogen catabolite repression; this enzyme is sometimes referred to 'ureidoglycolate hydrolase' but should not be confused with the Arabidopsis thaliana ureidoglycolate hydrolase enzyme which converts ureidoglycolate to glyoxylate, ammonia and carbon dioxide","termid":"PBO:0088102"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: GO:0007063
data:
  {"annotated_genes":["SJAG_01716","SJAG_05978","SJAG_00823","SJAG_03591","SJAG_01825","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87814,102282,111342,102377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[103430,102598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[103432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007063","terms_by_termid":{"GO:0045875":null,"GO:1905406":null,"GO:1905412":null}}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: FYPO:0001502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is higher than normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose level during vegetative growth","termid":"FYPO:0001444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level during cellular response to osmotic stress","synonyms":[{"name":"increased cellular trehalose level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose level during vegetative growth and during cellular response to osmotic stress","type":"exact"},{"name":"increased cellular trehalose level in response to osmotic stress","type":"exact"},{"name":"increased trehalose accumulation during cellular response to osmotic stress","type":"related"}],"termid":"FYPO:0001502"}


id: PBO:0034256
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_killed_by","termid":"PBO:0034256"}


id: PBO:0030349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030349"}


id: GO:0021766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hippocampus over time from its initial formation until its mature state.","definition_xrefs":["UBERON:0002421","GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hippocampus development","synonyms":[{"name":"hippocampal formation development","type":"exact"}],"termid":"GO:0021766"}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: PBO:0082900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein that interacts with Pho85p; has sequence similarity to G1 cyclins PCL1 and PCL2","termid":"PBO:0082900"}


id: GO:0047465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["EC:5.1.3.9","MetaCyc:5.1.3.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"N-acylglucosamine-6-phosphate 2-epimerase activity","secondary_identifiers":["RHEA:23932"],"synonyms":[{"name":"N-acetylglucosmamine 6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acetylmannosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylmannosamine phosphate 2-epimerase activity","type":"related"}],"termid":"GO:0047465"}


id: PBO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 1","termid":"PBO:0050412"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: PBO:0031215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation_during_vegetative_growth","termid":"PBO:0031215"}


id: PBO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1586","termid":"PBO:0052327"}


id: PBO:0053236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 2","termid":"PBO:0053236"}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: PBO:0110160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA chaperone, La protein, Sla1","termid":"PBO:0110160"}


id: GO:0046479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glycosphingolipid catabolic process","synonyms":[{"name":"glycosphingolipid breakdown","type":"exact"},{"name":"glycosphingolipid catabolism","type":"exact"},{"name":"glycosphingolipid degradation","type":"exact"}],"termid":"GO:0046479"}


id: GO:0051188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor biosynthetic process (obsolete GO:0051188)","synonyms":[{"name":"cofactor anabolism","type":"exact"},{"name":"cofactor biosynthesis","type":"exact"},{"name":"cofactor formation","type":"exact"},{"name":"cofactor synthesis","type":"exact"}],"termid":"GO:0051188"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["PMID:14570049","GOC:mah","GOC:isa_complete","PMID:9126736","PMID:7878057"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: PBO:0056118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 4","termid":"PBO:0056118"}


id: GO:1902288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["PMID:16040633","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to oomycetes","termid":"GO:1902288"}


id: GO:0086100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by endothelin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:10977869","GOC:bf","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"endothelin receptor signaling pathway","synonyms":[{"name":"endothelin signaling pathway","type":"related"}],"termid":"GO:0086100"}


id: FYPO:0003313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and in which the nucleus does not divide. The cell does not divide, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, mononucleate cell with elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, mononucleate cell with elongated germ tube","type":"exact"},{"name":"inviable mononucleate germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, mononucleate cell with elongated germ tube","type":"exact"},{"name":"mononucleate after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0003313"}


id: PBO:0041739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin regulated spectrin associated protein 1","termid":"PBO:0041739"}


id: PBO:0001465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine-mismatch binding protein 1","termid":"PBO:0001465"}


id: FYPO:0008267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of phosphate (Pi) in the cell is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphate (Pi) level","termid":"FYPO:0008266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal total cellular phosphate (Pi) level","secondary_identifiers":["PMID:37949217"],"termid":"FYPO:0008267"}


id: PBO:0036544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrin methyltransferase Met1","termid":"PBO:0036544"}


id: PBO:0001254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1640 family protein","termid":"PBO:0001254"}


id: GO:0120170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intraciliary transport particle B (IFT B) complex.","definition_xrefs":["PMID:20889716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intraciliary transport particle B binding","synonyms":[{"name":"IFT B complex binding","type":"related"},{"name":"intraciliary transport complex B binding","type":"exact"},{"name":"intraflagellar transport complex B binding","type":"exact"},{"name":"intraflagellar transport particle B binding","type":"exact"}],"termid":"GO:0120170"}


id: PBO:0041167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG anti-proliferation factor 3","termid":"PBO:0041167"}


id: PBO:0077526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 240","termid":"PBO:0077526"}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["GO:0006514"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: PBO:0004795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1 (predicted)","termid":"PBO:0004795"}


id: PBO:0088408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway ATPase Sec18","termid":"PBO:0088408"}


id: PR:000027845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dma1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1","synonyms":[{"name":"dma1","type":"exact"}],"termid":"PR:000027845"}


id: GO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric proximal tubule morphogenesis","termid":"GO:0072292"}


id: GO:0033334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a fin are generated and organized.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"part_of","term_name":"fin development","termid":"GO:0033333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin morphogenesis","termid":"GO:0033334"}


id: PBO:0028709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028709"}


id: PATO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow green","termid":"PATO:0001941"}


id: PBO:0074094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 9","termid":"PBO:0074094"}


id: PBO:0046574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 16","termid":"PBO:0046574"}


id: GO:0140621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by their D-mannose-sensitive agglutinatination of erythrocytes. In E. coli, type I pili consist of a short tip fibrillum made up of the adhesin protein (FimH) and two minor subunits (FimG and FimF) that is joined to the pilus rod, a homopolymer of ~1000 FimA subunits.","definition_xrefs":["PMID:29345620","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I pilus","synonyms":[{"name":"type 1 pilus","type":"exact"},{"name":"type I fimbriae","type":"exact"},{"name":"type I pili","type":"exact"}],"termid":"GO:0140621"}


id: PBO:0112989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein; regulates actin filament capping by recruiting capping protein to endocytic sites and to the cytokinetic actin ring; interacts with the capping protein complex; adapter that links synaptojanins, Inp52p and Inp53p, to the cortical actin cytoskeleton; contains two WH2-like actin binding domains and a C-terminal capping protein interaction (CPI) motif","termid":"PBO:0112989"}


id: GO:1904609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosodium L-glutamate stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21389115"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to monosodium L-glutamate (obsolete GO:1904609)","termid":"GO:1904609"}


id: PR:Q9Y7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-hydroxyacyl-CoA lyase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02766","PRO:DNx","PANTHER:PTHR18968:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacyl-CoA lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.04","secondary_identifiers":["UniProtKB:Q9Y7M1"],"synonyms":[{"name":"Spom972h-HACL1","type":"exact"}],"termid":"PR:Q9Y7M1"}


id: GO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonuclease activity","termid":"GO:0060700"}


id: PBO:0038882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 8","termid":"PBO:0038882"}


id: PBO:0053842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1108","termid":"PBO:0053842"}


id: FYPO:0002096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"increased protein phosphorylation during cellular response to HU","type":"exact"},{"name":"increased protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002096"}


id: PBO:0052755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 47","termid":"PBO:0052755"}


id: PBO:0086575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p","termid":"PBO:0086575"}


id: GO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnofuranose + NAD+ = L-rhamnono-1,4-lactone + H+ + NADH.","definition_xrefs":["RHEA:12649","EC:1.1.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-rhamnose 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03942","MetaCyc:L-RHAMNOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-rhamnofuranose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050034"}


id: GO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the olfactory nerve is generated and organized. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["ISBN:0838580343","GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve morphogenesis","synonyms":[{"name":"CN I morphogenesis","type":"related"}],"termid":"GO:0021627"}


id: PR:Q9P7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC5E4.10c gene.","definition_xrefs":["UniProtKB:Q9P7Z6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5E4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.10c","synonyms":[{"name":"Spom972h-SPCC5E4.10c","type":"exact"}],"termid":"PR:Q9P7Z6"}


id: GO:0051456
data:
  {"annotated_genes":["SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83985,89898],"is_not":false,"summary":null,"term":"GO:0051456"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis II. During meiosis II sister kinetochores are situated facing opposite spindle poles and bipolar attachment of the sister chromosomes to the spindle occurs.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase II chromosome alignment","termid":"GO:0043061"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00678":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to meiosis II kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of meiotic spindle microtubules to kinetochore in meiosis II","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiosis II","type":"related"},{"name":"meiotic bipolar attachment","type":"related"}],"termid":"GO:0051456","terms_by_termid":{"GO:0051456":null}}


id: GO:0018480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate semialdehyde + H2O + NAD+ = 5-carboxymethyl-2-hydroxymuconate + NADH + H+.","definition_xrefs":["EC:1.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:CHMS-DEHYDROGENASE-RXN","RHEA:15681","UM-BBD_reactionID:r0365"],"synonyms":[{"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"carboxymethylhydroxymuconic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018480"}


id: GO:0060194
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["GOC:tb","PMID:18075583","GOC:jp","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060194","terms_by_termid":{"GO:0060195":null}}


id: GO:0061283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"part_of","term_name":"mesonephric distal tubule morphogenesis","termid":"GO:0061273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric distal tubule identity","termid":"GO:0061283"}


id: PBO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine transmembrane transporter (predicted)","termid":"PBO:0017850"}


id: PR:000050489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 15 (Schizosaccharomyces pombe) that has not been phosphorylated by pom1, at the positions equivalent to Ser-405, Thr-419, Thr-492, Ser-511, Ser-527, Ser-605, Ser-636, Ser-702, Ser-710, Ser-721, Ser-732, Ser-743, Ser-752, Ser-774, Ser-785, Ser-786, Ser-813, Ser-821, Ser-831, Ser-836, and Ser-840 of the amino acid sequence represented by UniProtKB:Q09822. Example: UniProtKB:Q09822, Ser-405/Thr-419/Thr-492/Ser-511/Ser-527/Ser-605/Ser-636/Ser-702/Ser-710/Ser-721/Ser-732/Ser-743/Ser-752/Ser-774/Ser-785/Ser-786/Ser-813/Ser-821/Ser-831/Ser-836/Ser-840, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:32101481","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 15 (Schizosaccharomyces pombe)","termid":"PR:000050488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc15/UnPhos","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 15 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc15/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q09822, Ser-405/Thr-419/Thr-492/Ser-511/Ser-527/Ser-605/Ser-636/Ser-702/Ser-710/Ser-721/Ser-732/Ser-743/Ser-752/Ser-774/Ser-785/Ser-786/Ser-813/Ser-821/Ser-831/Ser-836/Ser-840, PR:000026291","type":"narrow"},{"name":"cdc15/UnPhos","type":"exact"},{"name":"cdc15/UnPhos:(S405,T419,T492,S511,S527,S605,S636,S702,S710,S721,S732,S743,S752,S774,S785,S786,S813,S821,S831,S836,S840)","type":"exact"}],"termid":"PR:000050489"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_02022","SJAG_03637","SJAG_00596","SJAG_00845","SJAG_04461","SJAG_03581","SJAG_00661","SJAG_00236","SJAG_01799","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87217,90653,91731,96228,100571,101387,109077,114769],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[101384,99750,96225,89808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:2000100":null,"GO:2000247":null}}


id: FYPO:0003187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found associated with astral microtubules during mitosis is observed there during mitosis. The protein may or may not normally associate with astral microtubules during other cell cycle phases.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to astral microtubule during mitosis","synonyms":[{"name":"ectopic protein localization to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalised to astral microtubule during mitosis","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitosis during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to astral microtubule during mitosis during vegetative growth","type":"exact"},{"name":"protein mislocalized to astral microtubule during mitotic M phase","type":"related"},{"name":"protein mislocalized to astral microtubule during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0003187"}


id: GO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the heart with respect to the left and right halves of the organism.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of heart left/right asymmetry","synonyms":[{"name":"determination of cardiac left/right asymmetry","type":"exact"}],"termid":"GO:0061371"}


id: PBO:0062321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 3","termid":"PBO:0062321"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: GO:1902191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-methylbutanoyl-CoA(4-).","definition_xrefs":["PMID:15574432","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"},{"relation_name":"is_a","term_name":"2-methylbutanoyl-CoA(4-) metabolic process","termid":"GO:1902189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-methylbutanoyl-CoA(4-) biosynthetic process","synonyms":[{"name":"2-methylbutanoyl-CoA(4-) anabolism","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) biosynthesis","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) formation","type":"exact"},{"name":"2-methylbutanoyl-CoA(4-) synthesis","type":"exact"}],"termid":"GO:1902191"}


id: PBO:0030278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_population_growth_rate","termid":"PBO:0030278"}


id: GO:0031758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-5 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Edg-5 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-5 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031758"}


id: PBO:0003255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf2","termid":"PBO:0003255"}


id: PBO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell","termid":"PBO:0030206"}


id: GO:0008530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete exogenous peptide receptor activity (obsolete GO:0008530)","synonyms":[{"name":"exogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008530"}


id: PBO:0054545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1945","termid":"PBO:0054545"}


id: PBO:0091891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3, human ERCC4 ortholog Rhp16/Rad16","termid":"PBO:0091891"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: GO:2001290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a hydroperoxide.","definition_xrefs":["PMID:18084891","PMID:15917183","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydroperoxide metabolic process","synonyms":[{"name":"hydroperoxide metabolism","type":"exact"}],"termid":"GO:2001290"}


id: PBO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sporulation_frequency","termid":"PBO:0031627"}


id: PBO:0081676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 597","termid":"PBO:0081676"}


id: PBO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Sid1","termid":"PBO:0001270"}


id: GO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear inner membrane (obsolete GO:0005639)","synonyms":[{"name":"integral to nuclear inner membrane","type":"narrow"}],"termid":"GO:0005639"}


id: GO:0060444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland duct is generated and organized. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland branching morphogenesis","type":"exact"}],"termid":"GO:0060444"}


id: PR:O94656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg16 gene.","definition_xrefs":["UniProtKB:O94656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.05","synonyms":[{"name":"Spom972h-atg16","type":"exact"}],"termid":"PR:O94656"}


id: PBO:0063183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX3 divergent transcript","termid":"PBO:0063183"}


id: GO:0010905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"regulation of UDP-glucose catabolic process","termid":"GO:0010904"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"UDP-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of UDP-glucose catabolic process","synonyms":[{"name":"negative regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010905"}


id: GO:1905003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving picolinic acid.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:19843166","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"picolinic acid metabolic process","synonyms":[{"name":"picolinate metabolism","type":"exact"},{"name":"picolinic acid metabolism","type":"exact"}],"termid":"GO:1905003"}


id: GO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-serine to form peptidyl-serine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine dephosphorylation","termid":"GO:0070262"}


id: GO:0090611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide, via the multivesicular body (MVB) sorting pathway; proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation. This process is independent of ubiquitination.","definition_xrefs":["PMID:22547407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway","termid":"GO:0090611"}


id: PBO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate filament family orphan 2","termid":"PBO:0050897"}


id: _global:enables
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c enables p iff c is capable of p and c acts to execute p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"_global:capable_of"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","secondary_identifiers":["RO:0002327"],"termid":"_global:enables"}


id: PBO:0079135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin associated factor X","termid":"PBO:0079135"}


id: PBO:0061572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 4","termid":"PBO:0061572"}


id: FYPO:0007815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to protein aggregate centers is normal (i.e. indistinguishable from wild type). Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:33386485","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to protein aggregate center","synonyms":[{"name":"normal protein localisation to protein aggregate centre","type":"exact"},{"name":"normal protein localization to PAC","type":"exact"},{"name":"normal protein localization to PACs","type":"exact"},{"name":"normal protein localization to protein aggregate center during mitotic cell cycle","type":"related"},{"name":"normal protein localization to protein aggregate center during vegetative growth","type":"exact"}],"termid":"FYPO:0007815"}


id: PBO:0074115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 1","termid":"PBO:0074115"}


id: PBO:0050835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"islet amyloid polypeptide","termid":"PBO:0050835"}


id: PBO:0059995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 15","termid":"PBO:0059995"}


id: PBO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein NIFK (predicted)","termid":"PBO:0005847"}


id: FYPO:0007595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitophagy during nitrogen starvation","synonyms":[{"name":"increased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007595"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["EC:3.5.1.76","MetaCyc:3.5.1.76-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: GO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that provides not only essential physical scaffolding for the cellular constituents but can also initiate crucial biochemical and biomechanical cues required for tissue morphogenesis, differentiation and homeostasis. The components are secreted by cells in the vicinity and form a sheet underlying or overlying cells such as endothelial and epithelial cells.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:21123617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen-containing extracellular matrix","termid":"GO:0062023"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["GOC:vw","PMID:1708436"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0011454
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k_cat(x10-5sec-1) for base excision activity of 1,N(6)-ethenoadenine = 5.3","termid":"PBO:0011454"}


id: GO:0140714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that assists early maturation of nascent 60S ribosomal subunits. The complex interacts with the large ribosomal subunit rRNA via one of the components (Urb2 in S. cerevisiae) and requires a RNA helicase (Dbp6 in S. cerevisiae).","definition_xrefs":["PMID:9528757","PMID:17145778","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"large ribosomal subunit pre-assembly complex","termid":"GO:0140714"}


id: PBO:0034817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit Bet4 (predicted)","termid":"PBO:0034817"}


id: PBO:0082802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress","termid":"PBO:0082802"}


id: GO:0018745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the ether in chloro-, bromo- or hydroxyepoxypropane to produce a chloro- or bromopropane diol or glycerol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide hydrolase A activity (obsolete GO:0018745)","termid":"GO:0018745"}


id: PATO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000268 absolute visual threshold (obsolete PATO:0000268)","termid":"PATO:0000268"}


id: PBO:0042530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 pseudogene 1","termid":"PBO:0042530"}


id: PBO:0074408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 2","termid":"PBO:0074408"}


id: PBO:0091744
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously assigned incorrectly as can1","termid":"PBO:0091744"}


id: PBO:0054432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1828","termid":"PBO:0054432"}


id: GO:0099564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission via modification of the structure of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure, modulating synaptic transmission","termid":"GO:0099564"}


id: PBO:0079820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UL16 binding protein 2","termid":"PBO:0079820"}


id: PR:O74483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15588:SF5","OMA:SCHPO05010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.10","secondary_identifiers":["UniProtKB:O74483"],"synonyms":[{"name":"Spom972h-LSM8","type":"exact"}],"termid":"PR:O74483"}


id: GO:0070543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a linoleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to linoleic acid","synonyms":[{"name":"response to linoleate","type":"exact"}],"termid":"GO:0070543"}


id: GO:0160128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an inorganic ion by a channel that opens in response to a change in proton concentration (pH).","definition_xrefs":["PMID:29513651","PMID:17167423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pH-gated monoatomic ion channel activity","secondary_identifiers":["Reactome:R-HSA-2671885","Wikipedia:Acid-sensing_ion_channel"],"synonyms":[{"name":"acid-sensing ion channel activity","type":"related"},{"name":"proton-gated ion channel activity","type":"exact"}],"termid":"GO:0160128"}


id: PBO:0053248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX2 antisense RNA 1","termid":"PBO:0053248"}


id: FYPO:0004735
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node","termid":"FYPO:0003919"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0007027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0004735"}


id: FYPO:0003845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to prospore membrane","synonyms":[{"name":"normal protein localisation to prospore membrane","type":"exact"},{"name":"normal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0003845"}


id: PBO:0054306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1698","termid":"PBO:0054306"}


id: GO:0009486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ubiquinol + O2 + 4 H+ = 2 ubiquinone + 2 H2O + 4 H+ [periplasmic space].","definition_xrefs":["RHEA:30251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cytochrome bo3 ubiquinol oxidase activity","secondary_identifiers":["MetaCyc:RXN0-5268","EC:7.1.1.3","TC:3.D.4.5.1","GO:0008827"],"synonyms":[{"name":"cytochrome bo oxidase","type":"exact"},{"name":"cytochrome bo(3) oxidase","type":"exact"},{"name":"cytochrome o ubiquinol oxidase activity","type":"related"}],"termid":"GO:0009486"}


id: PBO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 20","termid":"PBO:0071603"}


id: PBO:0085575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 20S proteasome assembly; forms a heterodimer with Add66p that binds to proteasome precursors; interaction with Pba1p-Add66p may affect function of the mature proteasome and its role in maintaining respiratory metabolism; similar to human PAC1 constituent of the PAC1-PAC2 complex involved in proteasome assembly","termid":"PBO:0085575"}


id: GO:1901999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogentisate.","definition_xrefs":["PMID:22980205","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homogentisate metabolic process","synonyms":[{"name":"homogentisate metabolism","type":"exact"}],"termid":"GO:1901999"}


id: PBO:0084902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tRNA:pseudouridine synthase; catalyzes the formation of pseudouridine at position 32 in mitochondrial tRNAs; contains an N-terminal mitochondrial targeting sequence; PUS9 has a paralog, RIB2, that arose from the whole genome duplication","termid":"PBO:0084902"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: PBO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 20","termid":"PBO:0044742"}


id: PBO:0076347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 14","termid":"PBO:0076347"}


id: PBO:0041135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 18","termid":"PBO:0041135"}


id: GO:0045614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of plasmatocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"is_a","term_name":"regulation of plasmatocyte differentiation","termid":"GO:0045613"},{"relation_name":"negatively_regulates","term_name":"plasmatocyte differentiation","termid":"GO:0042387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasmatocyte differentiation","synonyms":[{"name":"down regulation of plasmatocyte differentiation","type":"exact"},{"name":"down-regulation of plasmatocyte differentiation","type":"exact"},{"name":"downregulation of plasmatocyte differentiation","type":"exact"},{"name":"inhibition of plasmatocyte differentiation","type":"narrow"}],"termid":"GO:0045614"}


id: GO:0170013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.","definition_xrefs":["PMID:10839820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"channel complex","termid":"GO:0170013"}


id: PR:Q10110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase I-specific transcription initiation factor RRN3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00921","PANTHER:PTHR12790:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.11c","secondary_identifiers":["UniProtKB:Q10110"],"synonyms":[{"name":"Spom972h-RRN3","type":"exact"}],"termid":"PR:Q10110"}


id: GO:0009312
data:
  {"annotated_genes":["SJAG_00129","SJAG_01646","SJAG_01862","SJAG_00182","SJAG_01209","SJAG_01427","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73431,92588,104922,97109,87923,93209,89408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oligosaccharide anabolism","type":"exact"},{"name":"oligosaccharide biosynthesis","type":"exact"},{"name":"oligosaccharide formation","type":"exact"},{"name":"oligosaccharide synthesis","type":"exact"}],"termid":"GO:0009312","terms_by_termid":{"GO:0005992":null}}


id: PATO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001129 relative work value (obsolete PATO:0001129)","termid":"PATO:0001129"}


id: GO:0010527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of RNA-mediated transposition. RNA-mediated transposition is a type of transpositional recombination which occurs via an RNA intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, RNA-mediated (obsolete GO:0010527)","termid":"GO:0010527"}


id: PBO:0077158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 1, transcriptional corepressor","termid":"PBO:0077158"}


id: GO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a bacterial-type specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type RNA polymerase activity (obsolete GO:0001061)","termid":"GO:0001061"}


id: GO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer membrane around a bacterial endospore, located between the endospore cortex and endospore coat.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"outer endospore membrane","termid":"GO:0043594"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: GO:0047326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855228","EC:2.7.1.140","EC:2.7.1.151","KEGG_REACTION:R03478","MetaCyc:2.7.1.140-RXN"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase activity","type":"related"},{"name":"inositol 1,3,4,6-tetrakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 5-kinase activity","type":"broad"}],"termid":"GO:0047326"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: FYECO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for up to 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth <24 hrs","synonyms":[{"name":"growth <24 hours","type":"exact"},{"name":"overnight culture","type":"related"}],"termid":"FYECO:0000216"}


id: PBO:0049736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit alpha 2","termid":"PBO:0049736"}


id: PBO:0065134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1","termid":"PBO:0065134"}


id: FYPO:0009104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the recoil time of the cytokynetic ring after ring ablation is increased with respect to wild type. Experimentally, a localised cut or ablation is typically achieved using a laser. The recoil time is the time it takes the recoil to stop after laser ablation. This timing, in combination with the recoil distance are used to compute effective stiffness and drag of the ring components. See PMID:36980258.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased actomyosin contractile ring recoil time after ring ablation","secondary_identifiers":["PMID:36980258"],"synonyms":[{"name":"increased cytokinetic ring recoil distance after laser ablation","type":"broad"}],"termid":"FYPO:0009104"}


id: PBO:0040056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 3 pseudogene 4","termid":"PBO:0040056"}


id: PBO:0003650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S28 (predicted)","termid":"PBO:0003650"}


id: PATO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of size which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of size","termid":"PATO:0001956"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of size","synonyms":[{"name":"high variability of size","type":"exact"}],"termid":"PATO:0001958"}


id: PBO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 45","termid":"PBO:0042841"}


id: FYPO:0007067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular stress response to zinc ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered protein level during stress response to zinc ion","termid":"FYPO:0007051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during stress response to zinc ion","synonyms":[{"name":"decreased protein accumulation during stress response to zinc ion","type":"related"},{"name":"decreased protein level during cellular response to excess zinc","type":"exact"},{"name":"decreased protein level during cellular response to high zinc level","type":"exact"},{"name":"decreased protein level during cellular response to replete zinc","type":"related"},{"name":"decreased protein level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased protein level during response to zinc ion stress","type":"exact"},{"name":"decreased protein level during response to zinc toxicity","type":"related"},{"name":"decreased protein level during stress response to zinc","type":"exact"},{"name":"decreased protein level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"reduced protein level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007067"}


id: FYPO:0005633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which sister kinetochores separate during the first meiotic nuclear division, homologous chromosomes undergo normal reductional division, but sister chromatids divide unequally in meiosis II. Normally sister kinetochores remain together until meiosis II.  Normally sister kinetochores remain together until meiosis II.","definition_xrefs":["PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid nondisjunction at meiosis II","termid":"FYPO:0003182"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I","termid":"FYPO:0005648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, reductional chromosome separation, and unequal sister chromatid division","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, reductional chromosome separation, and unequal sister chromatid division","type":"exact"},{"name":"precocious centromeric dissociation during meiosis I and normal chromosome division in meiosis I, and unequal sister chromatid segregation in meiosis II","type":"exact"},{"name":"premature sister kinetochore separation and normal chromosome disjunction in meiosis I, and unequal sister chromatid disjunction in meiosis II","type":"exact"}],"termid":"FYPO:0005633"}


id: PBO:0081764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 695","termid":"PBO:0081764"}


id: GO:0033858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate.","definition_xrefs":["EC:2.7.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acetylgalactosamine kinase activity","secondary_identifiers":["MetaCyc:2.7.1.157-RXN","RHEA:12617"],"synonyms":[{"name":"ATP:N-acetyl-D-galactosamine 1-phosphotransferase activity","type":"related"},{"name":"GALK2","type":"related"},{"name":"GK2","type":"related"},{"name":"GalNAc kinase activity","type":"related"},{"name":"N-acetylgalactosamine (GalNAc)-1-phosphate kinase activity","type":"related"}],"termid":"GO:0033858"}


id: PATO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's exhibiting a upward bending of its leaves or other plant parts.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyponastic","termid":"PATO:0002329"}


id: GO:0007032
data:
  {"annotated_genes":["SJAG_01772","SJAG_02100","SJAG_01448","SJAG_03005","SJAG_01571","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85817,92762,96300,98707,114414],"is_not":false,"summary":null,"term":"GO:0007032"},{"annotations":[89988],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes.","definition_xrefs":["GOC:jl","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_01571":null,"SJAG_01772":null,"SJAG_02100":null,"SJAG_03005":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endosome organisation","type":"exact"},{"name":"endosome organization and biogenesis","type":"related"}],"termid":"GO:0007032","terms_by_termid":{"GO:0007032":null,"GO:0034496":null}}


id: PBO:0077344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86A","termid":"PBO:0077344"}


id: GO:0120316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and organization of the sperm flagellum, the microtubule-based axoneme and associated structures that are part of a sperm flagellum (or cilium).","definition_xrefs":["GOC:krc","PMID:32791035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"motile cilium assembly","termid":"GO:0044458"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"},{"relation_name":"part_of","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"sperm flagellum assembly","termid":"GO:0120316"}


id: GO:0000750
data:
  {"annotated_genes":["SJAG_02233","SJAG_01345","SJAG_01718","SJAG_00990","SJAG_03340","SJAG_00993","SJAG_01978","SJAG_02923"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84256,103160],"is_not":false,"summary":null,"term":"GO:0000750"},{"annotations":[89385],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[85331,88259,89386,92442,93112,102299],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"}]},"cv_name":"biological_process","definition":"A signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"},{"relation_name":"part_of","term_name":"response to pheromone triggering conjugation with cellular fusion","termid":"GO:0000749"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02923":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007330","GO:0030454"],"synonyms":[{"name":"transduction of mating signal","type":"broad"}],"termid":"GO:0000750","terms_by_termid":{"GO:0000750":null,"GO:0071507":null,"GO:0090029":null}}


id: FYPO:0005916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy at tRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in tRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at tRNA genes","type":"exact"}],"termid":"FYPO:0005916"}


id: PBO:0109192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin, meiosis specific","termid":"PBO:0109192"}


id: GO:0006893
data:
  {"annotated_genes":["SJAG_00430","SJAG_02231","SJAG_04609","SJAG_04044","SJAG_00858","SJAG_03838","SJAG_03938","SJAG_02753","SJAG_04358","SJAG_01335","SJAG_00916","SJAG_01516","SJAG_00144","SJAG_01114","SJAG_03970","SJAG_03357","SJAG_02320","SJAG_03754","SJAG_00330","SJAG_02240","SJAG_03864","SJAG_00826","SJAG_02166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84736,86837,88345,95598,95812,95959,96899,102315,103411,109888,111650,113718,114816],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[103171,87245,104816,102432,94771,105603,109032,103066,91216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84203],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00430":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01335":null,"SJAG_01516":null,"SJAG_02166":null,"SJAG_02231":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03754":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi to plasma membrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to plasma membrane vesicle-mediated transport","type":"exact"}],"termid":"GO:0006893","terms_by_termid":{"GO:0006893":null,"GO:0042997":null,"GO:0043001":null}}


id: PBO:0087214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase; catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; comparative analysis suggests that a mitochondrially targeted form may result from translation starting at a non-canonical codon upstream of the annotated start codon","termid":"PBO:0087214"}


id: PBO:0057054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 139","termid":"PBO:0057054"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: PBO:0039972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 3","termid":"PBO:0039972"}


id: PBO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U3","termid":"PBO:0000707"}


id: GO:0061144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a secondary alveolar septum over time, from its formation to the mature structure. A secondary alveolar septum is a specialized epithelium that subdivides the initial saccule.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelium development","termid":"GO:0060428"},{"relation_name":"part_of","term_name":"lung saccule development","termid":"GO:0060430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alveolar secondary septum development","termid":"GO:0061144"}


id: GO:0036518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dopaminergic neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["PMID:21106844","GOC:PARL","GOC:bf","PMID:23517308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemorepulsion of axon","termid":"GO:0061643"},{"relation_name":"part_of","term_name":"dopaminergic neuron axon guidance","termid":"GO:0036514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of dopaminergic neuron axon","synonyms":[{"name":"chemorepulsion of DA axon","type":"exact"},{"name":"chemorepulsion of dopaminergic axon","type":"related"}],"termid":"GO:0036518"}


id: PBO:0074648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 38","termid":"PBO:0074648"}


id: PBO:0089893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent)","termid":"PBO:0089893"}


id: _global:acts_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of or within p if c is enables f, and f is causally upstream of or within p. c is a material entity and p is an process.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of_or_within","secondary_identifiers":["RO:0002264"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:acts_upstream_of_or_within"}


