# terms

id: PBO:0054551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1951","termid":"PBO:0054551"}


id: GO:0140542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"regulation of piRNA transcription","termid":"GO:0140542"}


id: PBO:0017765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase (predicted)","termid":"PBO:0017765"}


id: PR:O42958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc2 gene.","definition_xrefs":["UniProtKB:O42958","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase 2-associated protein pat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.10c","synonyms":[{"name":"Spom972h-pdc2","type":"exact"},{"name":"decapping activator and translational repressor pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"topoisomerase II-associated protein pat1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42958"}


id: PBO:0041112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binder of sperm protein homolog 1","termid":"PBO:0041112"}


id: SO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant found within only speficic populations.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population_specific_variant","synonyms":[{"name":"population specific variant","type":"exact"}],"termid":"SO:0001780"}


id: GO:0006879
data:
  {"annotated_genes":["SJAG_04031","SJAG_04607","SJAG_04867","SJAG_01694","SJAG_03862","SJAG_04032","SJAG_04743","SJAG_02474","SJAG_04677","SJAG_00532","SJAG_02735","SJAG_00822","SJAG_01004","SJAG_02834","SJAG_00792","SJAG_04675","SJAG_00802","SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73795,85370,88378,89025,90128,92347,96532,100302,103438,109900],"is_not":false,"summary":null,"term":"GO:0006879"},{"annotations":[88524,90173,99836,90181,96531],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[99845],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006880"},{"annotations":[88521,88525,99838,108817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[61327,106806,106805,61610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of iron ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00532":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_01004":null,"SJAG_01694":null,"SJAG_02457":null,"SJAG_02474":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_03862":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04607":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular iron ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cellular iron ion homeostasis","type":"exact"},{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0006879","terms_by_termid":{"GO:0006879":null,"GO:0006880":null,"GO:0010106":null,"GO:0033214":null,"GO:0033215":null}}


id: PBO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx2","termid":"PBO:0002205"}


id: GO:1905767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:BHF","PMID:18812185","GOC:BHF_telomere","GOC:nc","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of double-stranded telomeric DNA binding","termid":"GO:1905767"}


id: PATO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased functionality","secondary_identifiers":["PATO:0001556","PATO:0001568","PATO:0001641","PATO:0001642"],"synonyms":[{"name":"dysfunction","type":"broad"},{"name":"dysfunctional","type":"broad"},{"name":"having decreased function","type":"exact"},{"name":"impaired","type":"related"},{"name":"lacks function of type","type":"exact"},{"name":"low functionality","type":"exact"},{"name":"partial functionality","type":"exact"}],"termid":"PATO:0001624"}


id: FYPO:0003782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization is normal (i.e. indistinguishable from wild type), resulting in a normal spatial arrangement of nuclear pores within the nuclear envelope, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear pore localization","termid":"FYPO:0000771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal nuclear pore localization during mitotic interphase","synonyms":[{"name":"normal NPC localization during mitotic interphase","type":"exact"},{"name":"normal nuclear pore complex localization during mitotic interphase","type":"exact"},{"name":"normal nuclear pore distribution during mitotic interphase","type":"exact"},{"name":"normal nuclear pore localisation during mitotic interphase","type":"exact"},{"name":"normal nuclear pore localization during interphase during mitotic cell cycle","type":"related"},{"name":"normal nuclear pore localization during interphase during vegetative growth","type":"exact"},{"name":"normal nuclear pore localization during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003782"}


id: PBO:0028890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube","termid":"PBO:0028890"}


id: PBO:0051770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracisternal A particle-promoted polypeptide","termid":"PBO:0051770"}


id: PBO:0027778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation","termid":"PBO:0027778"}


id: PBO:0052493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL6 antisense RNA 1","termid":"PBO:0052493"}


id: PBO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 4","termid":"PBO:0060707"}


id: PBO:0042089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 158","termid":"PBO:0042089"}


id: PBO:0053183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 8","termid":"PBO:0053183"}


id: PBO:0090637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomembrane system acetyl-CoA transmembrane transporter","termid":"PBO:0090637"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: PBO:0081528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 438","termid":"PBO:0081528"}


id: GO:0045960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002925"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, classical pathway","synonyms":[{"name":"activation of complement activation, classical pathway","type":"narrow"},{"name":"positive regulation of complement cascade, classical pathway","type":"exact"},{"name":"stimulation of complement activation, classical pathway","type":"narrow"},{"name":"up regulation of complement activation, classical pathway","type":"exact"},{"name":"up-regulation of complement activation, classical pathway","type":"exact"},{"name":"upregulation of complement activation, classical pathway","type":"exact"}],"termid":"GO:0045960"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: PBO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 2","termid":"PBO:0042465"}


id: PBO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensor for misfolded ER glycoproteins Yos9 (predicted)","termid":"PBO:0000419"}


id: GO:0031760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-7 lysophosphatidic acid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Edg-7 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-7 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA3 receptor binding","type":"exact"}],"termid":"GO:0031760"}


id: GO:0018619
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzene + H+ + NADH + O2 = cis-cyclohexa-3,5-diene-1,2-diol + NAD+.","definition_xrefs":["RHEA:13813","EC:1.14.12.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzene 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03543","UM-BBD_reactionID:r0079","MetaCyc:BENZENE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"benzene dioxygenase activity","type":"related"},{"name":"benzene hydroxylase activity","type":"related"},{"name":"benzene,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018619"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PR:P0CT73
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1101 gene.","definition_xrefs":["UniProtKB:P0CT73","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.03","synonyms":[{"name":"Spom972h-rps1101","type":"exact"}],"termid":"PR:P0CT73"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:1905077","GO:0045379"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: MOD:01686
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two alpha amino hydrogen atoms with two methyl group.","definition_xrefs":["Unimod:36#N-term","OMSSA:38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino dimethylated residue","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"N2Me2Res","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"ntermpepdimethyl","type":"exact"}],"termid":"MOD:01686"}


id: PBO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12 (predicted)","termid":"PBO:0004903"}


id: PATO:0000324
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium wavelength of that portion of the visible spectrum lying between orange and green, evoked in the human observer by radiant energy with wavelengths of approximately 570 to 590 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow","termid":"PATO:0000324"}


id: GO:0030068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lytic viral life cycle (obsolete GO:0030068)","synonyms":[{"name":"lytic viral life cycle","type":"exact"}],"termid":"GO:0030068"}


id: GO:1903421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:22745285","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of synaptic vesicle recycling","synonyms":[{"name":"regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903421"}


id: GO:0070523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036","RHEA:53116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","secondary_identifiers":["Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"termid":"GO:0070523"}


id: PBO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 29","termid":"PBO:0039509"}


id: PBO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(2)(q37.3)","termid":"PBO:0047870"}


id: PBO:0077163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 4, transcriptional corepressor","termid":"PBO:0077163"}


id: PBO:0073894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A9 antisense RNA 1","termid":"PBO:0073894"}


id: PBO:0078065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 55 (pseudogene)","termid":"PBO:0078065"}


id: FYPO:0001727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glutamine level","synonyms":[{"name":"decreased cellular L-glutamine level","type":"exact"},{"name":"decreased cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamine level during vegetative growth","type":"exact"},{"name":"decreased level of glutamine in cell","type":"exact"},{"name":"reduced cellular glutamine level","type":"exact"},{"name":"reduced level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001727"}


id: GO:0000963
data:
  {"annotated_genes":["SJAG_00428","SJAG_02526","SJAG_00077","SJAG_04700","SJAG_00358","SJAG_02991","SJAG_00255","SJAG_00997","SJAG_04113","SJAG_03104","SJAG_02288","SJAG_02302","SJAG_04885","SJAG_00865","SJAG_01704","SJAG_04367","SJAG_00797","SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99659],"is_not":false,"summary":null,"term":"GO:0000963"},{"annotations":[106629,86056,92315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090615"},{"annotations":[105918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140040"},{"annotations":[95005,110443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000965"},{"annotations":[109909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[113913,83852,105919,79158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[97427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[110258,114602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[112969,90335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104497,88867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a mitochondrial genome into one or more mature RNA molecules; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"},{"relation_name":"is_a","term_name":"mitochondrial gene expression","termid":"GO:0140053"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00428":null,"SJAG_00797":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_02526":null,"SJAG_02991":null,"SJAG_03104":null,"SJAG_04113":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null,"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial RNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000963","terms_by_termid":{"GO:0000963":null,"GO:0000964":null,"GO:0000965":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:0090615":null,"GO:0140040":null,"GO:1990180":null,"GO:1990799":null}}


id: PBO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 32","termid":"PBO:0060085"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: PBO:0054438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1834","termid":"PBO:0054438"}


id: PBO:0065802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A pseudogene 2","termid":"PBO:0065802"}


id: GO:0034445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein particle oxidation, occurring in the blood plasma.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma lipoprotein oxidation","termid":"GO:0034444"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"plasma lipoprotein particle oxidation","termid":"GO:0034441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma lipoprotein oxidation","synonyms":[{"name":"inhibition of plasma lipoprotein oxidation","type":"narrow"},{"name":"negative regulation of plasma lipoprotein particle oxidation","type":"related"}],"termid":"GO:0034445"}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:PARL","GO_REF:0000058","PMID:20080761","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: GO:0061856
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87277],"is_not":false,"summary":null,"term":"GO:0061856"},{"annotations":[104687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a Golgi membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi calcium ion transport","termid":"GO:0032472"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061856","terms_by_termid":{"GO:0061454":null,"GO:0061856":null}}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: SO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA transcript, derived from the transcription of the telomere. These transcripts contain G rich telomeric RNA repeats and RNA tracts corresponding to adjacent subtelomeric sequences. They are 100-9000 bases long.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric_transcript","termid":"SO:0001927"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERRA","synonyms":[{"name":"telomeric repeat containing RNA","type":"related"}],"termid":"SO:0001923"}


id: PBO:0041380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 1","termid":"PBO:0041380"}


id: GO:0038031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, where the signal is passed on via the JNK cascade.","definition_xrefs":["GPC:rl","PMID:20032469","PMID:19137009","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:0038031)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"}],"termid":"GO:0038031"}


id: PBO:0084441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltase (alpha-D-glucosidase); inducible protein involved in maltose catabolism; encoded in the MAL1 complex locus; hydrolyzes the disaccharides maltose, turanose, maltotriose, and sucrose","termid":"PBO:0084441"}


id: PBO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 24","termid":"PBO:0046231"}


id: PBO:0029182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029182"}


id: GO:0097043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone.","definition_xrefs":["GOC:pr","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 acetylation (obsolete GO:0097043)","termid":"GO:0097043"}


id: PR:000027591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Haspin. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Phos(T3)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/Phos:1","type":"exact"},{"name":"hht2/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht2/Phos(T3)","type":"exact"}],"termid":"PR:000027591"}


id: GO:0050689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that results in the inhibition of antiviral immune response mechanisms, thereby facilitating viral replication. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response to virus","termid":"GO:0050687"},{"relation_name":"is_a","term_name":"regulation of defense response to virus by host","termid":"GO:0050691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to virus by host","synonyms":[{"name":"down regulation of antiviral response by host","type":"exact"},{"name":"down-regulation of antiviral response by host","type":"exact"},{"name":"downregulation of antiviral response by host","type":"exact"},{"name":"inhibition of antiviral response by host","type":"narrow"},{"name":"negative regulation by host of antiviral response","type":"exact"},{"name":"negative regulation of antiviral response by host","type":"exact"}],"termid":"GO:0050689"}


id: FYPO:0004656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"},{"relation_name":"is_a","term_name":"abnormal protein localization to telomere during vegetative growth","termid":"FYPO:0003108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to telomere during vegetative growth","synonyms":[{"name":"increased protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"increased protein localisation to telomere during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"increased protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004656"}


id: GO:0015192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-phenylalanine from one side of a membrane to the other. L-phenylalanine is 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-phenylalanine transmembrane transporter activity","synonyms":[{"name":"L-phenylalanine permease activity","type":"exact"},{"name":"L-phenylalanine transporter activity","type":"broad"}],"termid":"GO:0015192"}


id: GO:0021595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the rhombomere structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere structural organization","synonyms":[{"name":"rhombomere structural organisation","type":"exact"}],"termid":"GO:0021595"}


id: PBO:0047706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMNL1 antisense RNA 1","termid":"PBO:0047706"}


id: PBO:0062564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AD member 1","termid":"PBO:0062564"}


id: GO:2000404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell migration","synonyms":[{"name":"regulation of T lymphocyte migration","type":"exact"},{"name":"regulation of T-cell migration","type":"exact"},{"name":"regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000404"}


id: PBO:0040423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1","termid":"PBO:0040423"}


id: PBO:0077673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 19","termid":"PBO:0077673"}


id: GO:0098810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter molecules from the extrasynaptic space into the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter reuptake","termid":"GO:0098810"}


id: PBO:0072720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor gamma","termid":"PBO:0072720"}


id: PBO:0079043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-5","termid":"PBO:0079043"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: PBO:0027563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiosis","termid":"PBO:0027563"}


id: GO:1990588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB and FtsL.","definition_xrefs":["GOC:bhm","PMID:15165235","PMID:21784946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"divisome complex","termid":"GO:1990586"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"FtsQBL complex","termid":"GO:1990587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005829","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FtsBL complex","synonyms":[{"name":"FtsB-FtsL complex","type":"exact"}],"termid":"GO:1990588"}


id: PBO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 14 (pseudogene)","termid":"PBO:0045603"}


id: GO:0048247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lymphocyte in response to an external stimulus.","definition_xrefs":["GOC:hjd","PMID:12391252","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte chemotaxis","termid":"GO:0048247"}


id: PBO:0074071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 46","termid":"PBO:0074071"}


id: PBO:0046451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-prolyl-tRNA synthetase 1","termid":"PBO:0046451"}


id: GO:0036374
data:
  {"annotated_genes":["SJAG_01612","SJAG_03316"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94434,95255],"is_not":false,"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + H2O = L-cysteinylglycine + L-glutamate.","definition_xrefs":["EC:3.4.19.13","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"},{"relation_name":"is_a","term_name":"threonine-type peptidase activity","termid":"GO:0070003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0016787","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"glutathione hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9026757","MetaCyc:RXN-12618","Reactome:R-HSA-9035966","KEGG_REACTION:R00494","Reactome:R-HSA-5433072","Reactome:R-HSA-8943279","Reactome:R-HSA-9026927","Reactome:R-HSA-9753634","RHEA:28807","Reactome:R-HSA-9026916","Reactome:R-HSA-1222712","Reactome:R-HSA-266046","Reactome:R-HSA-9026907","Reactome:R-HSA-9026912","Reactome:R-HSA-5602984"],"synonyms":[{"name":"gamma-glutamyltranspeptidase activity","type":"related"},{"name":"glutathionase activity","type":"related"}],"termid":"GO:0036374","terms_by_termid":{"GO:0036374":null}}


id: GO:0030884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an exogenous lipid antigen (examples include microbial lipids and glycolipids).","definition_xrefs":["PMID:14500461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid antigen binding","termid":"GO:0030882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"exogenous lipid antigen binding","termid":"GO:0030884"}


id: GO:0042794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"},{"relation_name":"is_a","term_name":"plastid transcription","termid":"GO:0042793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"plastid rRNA transcription","synonyms":[{"name":"rRNA transcription from plastid promoter","type":"exact"}],"termid":"GO:0042794"}


id: PR:O13821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.05c","synonyms":[{"name":"Spom972h-sst4","type":"exact"},{"name":"suppressor of ste12 deletion protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13821"}


id: PBO:0062555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 2","termid":"PBO:0062555"}


id: GO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory vesicle","termid":"GO:0099503"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"secretory granule","synonyms":[{"name":"secretory vesicle","type":"broad"}],"termid":"GO:0030141"}


id: PBO:0073683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 5","termid":"PBO:0073683"}


id: PBO:0041261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q A chain","termid":"PBO:0041261"}


id: GO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-allose(out) = ADP + phosphate + D-allose(in).","definition_xrefs":["RHEA:29799","PMID:9401019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type D-allose transporter activity","secondary_identifiers":["EC:7.5.2.8"],"synonyms":[{"name":"D-allose porter activity","type":"broad"},{"name":"D-allose-importing ATPase activity","type":"related"}],"termid":"GO:0015615"}


id: _global:decreased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a lower extent than in a preceding phase or process, where the experiment does not distinguish between decreased addition and increased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_during","termid":"_global:decreased_during"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_04395","SJAG_04346","SJAG_00271","SJAG_02644","SJAG_00689","SJAG_02427","SJAG_03466","SJAG_04992","SJAG_00882","SJAG_00311","SJAG_03697","SJAG_03413","SJAG_03719","SJAG_04330","SJAG_04491","SJAG_04492","SJAG_02830","SJAG_00722","SJAG_02436","SJAG_02759","SJAG_01811","SJAG_01494","SJAG_01275","SJAG_01839","SJAG_01454","SJAG_03496","SJAG_03012","SJAG_01606"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85725,86906,88170,88875,88965,89269,90903,94036,94042,95231,95509,96453,98567,99558,102024,103971,106829,108307,112175,112242,112666,113290,114174,114877],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[88080,84049,93946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[88081,108457,84050],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03012":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0038628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical chemokine receptor 4","termid":"PBO:0038628"}


id: PR:O74718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sup35 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic peptide chain release factor GTP-binding subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.04","synonyms":[{"name":"ERF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ERF2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ERF3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sup35","type":"exact"},{"name":"polypeptide release factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation release factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74718"}


id: PBO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 37","termid":"PBO:0060136"}


id: PBO:0046278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMI domain containing 1","termid":"PBO:0046278"}


id: PBO:0089092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/DEAH box helicase, human DDL60 and DDL60L ortholog, implicated in mRNA degradation","termid":"PBO:0089092"}


id: PBO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 4","termid":"PBO:0049221"}


id: PBO:0055924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A12, pseudogene","termid":"PBO:0055924"}


id: PBO:0046794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor","termid":"PBO:0046794"}


id: GO:0071892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell activation process that occurs in thrombocytes and consists of a series of progressive, overlapping events including shape change, adhesiveness, and aggregation, which, when carried through to completion, lead to the formation of a stable hemostatic plug. Thrombocytes are nucleated cells found in non-mammalian vertebrates and are involved in hemostasis. They are the functional equivalent of the non-nucleated platelets found in mammals.","definition_xrefs":["GOC:mah","PMID:10606877","PMID:15634265","GOC:lb","PMID:20180901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte activation","synonyms":[{"name":"blood coagulation, thrombocyte activation","type":"exact"}],"termid":"GO:0071892"}


id: PBO:0085806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; down-regulated at low calcium levels; mCherry fusion protein localizes to the vacuole","termid":"PBO:0085806"}


id: GO:0008089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal transport","termid":"GO:0098930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterograde axonal transport","synonyms":[{"name":"anterograde axon cargo transport","type":"exact"}],"termid":"GO:0008089"}


id: GO:0000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in cell wall organization or biogenesis (obsolete GO:0000198)","synonyms":[{"name":"activation of MAP kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKK activity","type":"exact"}],"termid":"GO:0000198"}


id: PBO:0053685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 877","termid":"PBO:0053685"}


id: FYPO:0007670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is normal length, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PMID:9862966","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment and normal cell length","synonyms":[{"name":"inviable mononucleate monoseptate cell with anucleate compartment and normal cell length during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division; normal cell length","type":"related"},{"name":"inviable with septation independent of mitosis, normal cell length","type":"related"},{"name":"inviable with septation without nuclear division; normal cell length","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell with normal cell length","type":"exact"}],"termid":"FYPO:0007670"}


id: GO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heme biosynthetic process","synonyms":[{"name":"activation of heme biosynthetic process","type":"narrow"},{"name":"positive regulation of haem biosynthetic process","type":"exact"},{"name":"positive regulation of heme anabolism","type":"exact"},{"name":"positive regulation of heme biosynthesis","type":"exact"},{"name":"positive regulation of heme formation","type":"exact"},{"name":"positive regulation of heme synthesis","type":"exact"},{"name":"stimulation of heme biosynthetic process","type":"narrow"},{"name":"up regulation of heme biosynthetic process","type":"exact"},{"name":"up-regulation of heme biosynthetic process","type":"exact"},{"name":"upregulation of heme biosynthetic process","type":"exact"}],"termid":"GO:0070455"}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: GO:0086015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a sinoatrial node cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"},{"relation_name":"part_of","term_name":"SA node cell to atrial cardiac muscle cell signaling","termid":"GO:0086018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"SA node cell action potential","synonyms":[{"name":"SA node cardiac muscle cell action potential","type":"exact"},{"name":"SAN cardiac muscle cell action potential","type":"exact"},{"name":"sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086015"}


id: PBO:0062588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 3","termid":"PBO:0062588"}


id: PBO:0047692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 4","termid":"PBO:0047692"}


id: PBO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 22, pseudogene","termid":"PBO:0042666"}


id: GO:0060411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of a cardiac septum is generated and organized. A cardiac septum is a partition that separates parts of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"cardiac septum development","termid":"GO:0003279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum morphogenesis","secondary_identifiers":["GO:0003280"],"synonyms":[{"name":"heart septum morphogenesis","type":"exact"}],"termid":"GO:0060411"}


id: PBO:0027675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_metaphase_with_abnormal_spindle","termid":"PBO:0027675"}


id: PBO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 47","termid":"PBO:0070817"}


id: GO:1900354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanofuran metabolic process","synonyms":[{"name":"regulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900354"}


id: PATO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000439 perseverative (obsolete PATO:0000439)","termid":"PATO:0000439"}


id: PBO:0082132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin-binding protein of the cortical actin cytoskeleton; important for activation of actin nucleation mediated by the Arp2/Arp3 complex; inhibits actin filament elongation at the barbed-end; phosphorylation within its proline-rich region, mediated by Cdc28p and Pho85p, protects Abp1p from PEST sequence-mediated proteolysis; mammalian homolog of HIP-55 (hematopoietic progenitor kinase 1 [HPK1]-interacting protein of 55 kDa)","termid":"PBO:0082132"}


id: GO:0051169
data:
  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directed movement of substances into, out of, or within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular 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id: GO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the metanephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron development","termid":"GO:0072210"}


id: PBO:0108950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOPL pseudogene 2","termid":"PBO:0108950"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: FYPO:0002013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oxidation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein oxidation during vegetative growth","synonyms":[{"name":"normal protein oxidation during mitotic cell cycle","type":"related"},{"name":"normal protein/peptide oxidation during vegetative growth","type":"exact"}],"termid":"FYPO:0002013"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: GO:0016460
data:
  {"annotated_genes":["SJAG_02431","SJAG_00228","SJAG_01665","SJAG_03703","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78672,93713,96749,97311,113868],"is_not":false,"summary":null,"term":"GO:0016460"}]},"cv_name":"cellular_component","definition":"A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_01665":null,"SJAG_02431":null,"SJAG_03703":null,"SJAG_04781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"myosin II complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"conventional myosin","type":"related"}],"termid":"GO:0016460","terms_by_termid":{"GO:0016460":null}}


id: SO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a pyrrolysine anticodon, and a 3' pyrrolysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"pyrrolysine_tRNA_primary_transcript","termid":"SO:0001178"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysyl_tRNA","synonyms":[{"name":"pyrrolysyl tRNA","type":"exact"},{"name":"pyrrolysyl-transfer RNA","type":"exact"},{"name":"pyrrolysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000766"}


id: PBO:0039294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 intronic transcript 1","termid":"PBO:0039294"}


id: GO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"aerobic fructose catabolic process","synonyms":[{"name":"aerobic fructose breakdown","type":"exact"},{"name":"aerobic fructose catabolism","type":"exact"},{"name":"aerobic fructose degradation","type":"exact"}],"termid":"GO:0019576"}


id: PBO:0060932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 2 interacting protein","termid":"PBO:0060932"}


id: PBO:0055341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2769","termid":"PBO:0055341"}


id: PBO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 15","termid":"PBO:0070342"}


id: PBO:0046917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 32 member A","termid":"PBO:0046917"}


id: PBO:0074293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolemma associated protein","termid":"PBO:0074293"}


id: PBO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_non_functional_homology_relationship_with","termid":"PBO:0034076"}


id: PBO:0112603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN signalling inhibitor, two-component GAP Byr4","termid":"PBO:0112603"}


id: GO:0071309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phylloquinone (vitamin K1) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phylloquinone","termid":"GO:0032573"},{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phylloquinone","synonyms":[{"name":"cellular response to vitamin K1","type":"exact"}],"termid":"GO:0071309"}


id: GO:0006886
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id: PBO:0051422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-33 (non-functional)","termid":"PBO:0051422"}


id: GO:1902097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in defense response to Gram-negative bacterium.","definition_xrefs":["GOC:TermGenie","PMID:17183709","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium (obsolete GO:1902097)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1902097"}


id: GO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid kinase activity","termid":"GO:0043550"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.131-RXN","RHEA:12761"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: PBO:0066027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 10","termid":"PBO:0066027"}


id: GO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Conversion of vitamin D3 from its largely inactive form (calciol, also called cholecalciferol) into a hormonally active form (calcitriol). Conversion requires 25-hydroxylation of calciol in the liver to form calcidiol, and subsequent 1,alpha-hydroxylation of calcidiol in the kidney to form calcitriol.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:17426122","PMID:20511049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D biosynthetic process","termid":"GO:0042368"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"calcitriol biosynthetic process from calciol","synonyms":[{"name":"1alpha,25(OH)2D3 biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxycholecalciferol biosynthesis","type":"broad"},{"name":"1alpha,25-dihydroxyvitamin D3 biosynthesis","type":"broad"},{"name":"calcitriol biosynthesis from calciol","type":"exact"},{"name":"vitamin D3 activation","type":"exact"}],"termid":"GO:0036378"}


id: PBO:0085967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; may have a role in telomere maintenance; target of UME6 regulation","termid":"PBO:0085967"}


id: PBO:0079424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 7","termid":"PBO:0079424"}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: PBO:0050858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylcysteine carboxyl methyltransferase","termid":"PBO:0050858"}


id: GO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral B cell anergy","termid":"GO:0002917"}


id: GO:0052820
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97627],"is_not":false,"summary":null,"term":"GO:0052820"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA with 1-N6-ethenoadenine + H2O = DNA with abasic site + 1-N6-ethenoadenine. This reaction is the removal of 1,N6-ethenoadenine by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar.","definition_xrefs":["PMID:21960007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA-1,N6-ethenoadenine N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,N(6)-ethenoadenine N-glycosylase activity","type":"exact"},{"name":"1,N6-ethenoadenine glycosylase activity","type":"exact"}],"termid":"GO:0052820","terms_by_termid":{"GO:0052820":null}}


id: PBO:0109617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2 (pseudogene)","termid":"PBO:0109617"}


id: PBO:0031030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolus_organization","termid":"PBO:0031030"}


id: PBO:0072918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class F member 1","termid":"PBO:0072918"}


id: PBO:0066064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association (RalGDS/AF-6) and pleckstrin homology domains 1","termid":"PBO:0066064"}


id: PBO:0029402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_cell_division_site","termid":"PBO:0029402"}


id: GO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A heterodimeric enzyme composed of an alpha and beta subunit. Catalyzes the formation of L-2-aminoadipate from L-2-aminoadipate 6-semialdehyde.","definition_xrefs":["EC:1.2.1.31"],"gene_count":0,"genotype_count":0,"name":"obsolete aminoadipate-semialdehyde dehydrogenase complex (obsolete GO:0005949)","synonyms":[{"name":"aminoadipate-semialdehyde dehydrogenase complex","type":"exact"}],"termid":"GO:0005949"}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: GO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by the innate immune system and directed against a previously encountered immunologic stimulus, being quicker and quantitatively better compared with the initial response to that stimulus.","definition_xrefs":["PMID:26086132","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate immunity memory response","termid":"GO:0090714"}


id: GO:0061512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cilium","termid":"GO:0061512"}


id: PBO:0088042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p","termid":"PBO:0088042"}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: GO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul2-RING ubiquitin ligase complex","synonyms":[{"name":"CBC complex","type":"broad"},{"name":"CDL2 complex","type":"exact"},{"name":"CRL2 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"ECS complex","type":"broad"},{"name":"SCF2 complex","type":"related"},{"name":"VBC complex","type":"narrow"},{"name":"cullin-RING ligase 2","type":"exact"}],"termid":"GO:0031462"}


id: PBO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_uracil","termid":"PBO:0030725"}


id: GO:0002191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where the cap structure, composed of a 7- methylguanosine (m7G) group and associated cap-binding proteins, located at the 5' end of an mRNA molecule, which serves as a molecular tag that marks the spot where the 40S ribosomal subunit, is recruited and will then scan in a 5' to 3' direction until an AUG codon is encountered in an appropriate sequence context to initiate mRNA translation.","definition_xrefs":["PMID:19604130","PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"cap-dependent translational initiation","termid":"GO:0002191"}


id: PBO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 30","termid":"PBO:0072501"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: PBO:0053493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 471","termid":"PBO:0053493"}


id: PBO:0049939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 3","termid":"PBO:0049939"}


id: PBO:0039618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANXA2R antisense RNA 1","termid":"PBO:0039618"}


id: PBO:0087654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric Gim/prefoldin protein complex; involved in the folding of alpha-tubulin, beta-tubulin, and actin; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087654"}


id: PBO:0068673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 54, pseudogene","termid":"PBO:0068673"}


id: PBO:0090064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine/histone N1-acetyltransferase","termid":"PBO:0090064"}


id: GO:0080119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:18780803","PMID:19147648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ER body organization","synonyms":[{"name":"ER body organisation","type":"exact"},{"name":"ER body organization and biogenesis","type":"related"},{"name":"endoplasmic reticulum body organization","type":"exact"},{"name":"endoplasmic reticulum body organization and biogenesis","type":"related"}],"termid":"GO:0080119"}


id: internal:feature
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature","termid":"internal:feature"}


id: GO:0022409
data:
  {"annotated_genes":["SJAG_00910","SJAG_04191","SJAG_02380","SJAG_03802","SJAG_01253","SJAG_03484"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107395,110102,104778,112157,101920,104654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of cell adhesion to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell-cell adhesion","type":"narrow"},{"name":"stimulation of cell-cell adhesion","type":"narrow"},{"name":"up regulation of cell-cell adhesion","type":"exact"},{"name":"up-regulation of cell-cell adhesion","type":"exact"},{"name":"upregulation of cell-cell adhesion","type":"exact"}],"termid":"GO:0022409","terms_by_termid":{"GO:1900735":null}}


id: PBO:0029003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3_binding","termid":"PBO:0029003"}


id: PBO:0030982
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030982"}


id: GO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}


id: PBO:0027159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_interphase_microtubule_nucleation","termid":"PBO:0027159"}


id: FYPO:0003951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003951)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003951"}


id: GO:2001190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"positively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"positive regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001190"}


id: GO:0044209
data:
  {"annotated_genes":["SJAG_01859","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89602,112853],"is_not":false,"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of adenosine monophosphate (AMP) from derivatives of it (either adenine, ADP or adenosine 3',5'-bisphosphate) without de novo synthesis.","definition_xrefs":["PMID:8917457","PMID:9864350","GOC:ecd","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AMP biosynthetic process","termid":"GO:0006167"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"AMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP biosynthetic process via salvage pathway","type":"exact"},{"name":"adenosine monophosphate salvage","type":"exact"}],"termid":"GO:0044209","terms_by_termid":{"GO:0044209":null}}


id: PBO:0027222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved,_elongated,_swollen_vegetative_cell","termid":"PBO:0027222"}


id: PBO:0044329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 10","termid":"PBO:0044329"}


id: GO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological response of the kidneys to a decrease in blood flow.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by circulatory renin-angiotensin","termid":"GO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","synonyms":[{"name":"renal response to blood flow during renin-angiotensin control of blood pressure","type":"related"}],"termid":"GO:0001999"}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: SO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced","termid":"SO:0000893"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_gene","synonyms":[{"name":"silenced gene","type":"exact"}],"termid":"SO:0000127"}


id: PR:Q9P7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03873","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.16c","secondary_identifiers":["UniProtKB:Q9P7K8"],"synonyms":[{"name":"Spom972h-SUPT4H1","type":"exact"},{"name":"chromatin elongation factor spt4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7K8"}


id: PBO:0067435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 556, pseudogene","termid":"PBO:0067435"}


id: PBO:0069906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1197, pseudogene","termid":"PBO:0069906"}


id: PBO:0113484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Third subunit of DNA polymerase delta; involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; parental H3-H4 histone chaperone that mediates transfer of parental histones to the lagging strand via Pol1p during DNA replication; forms a complex with Rev3p, Rev7p and Pol31p; interacts with Hys2p, PCNA (Pol30p), and Pol1p","termid":"PBO:0113484"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt","GOC:kv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0098772","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-163625","GO:0071884","Reactome:R-HSA-381612"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: GO:0050890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cognition","secondary_identifiers":["Wikipedia:Cognition"],"termid":"GO:0050890"}


id: PBO:0078912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-1","termid":"PBO:0078912"}


id: GO:0045210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fas ligand (FasL or CD95L), an antigen originally found to be expressed on the cell surface of activated human T-lymphocytes and B-lymphocytes and a variety of malignant human lymphoid cell lines.","definition_xrefs":["PMID:10637433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"FasL biosynthetic process","synonyms":[{"name":"APT1LG1 biosynthetic process","type":"exact"},{"name":"CD178 biosynthetic process","type":"exact"},{"name":"CD95L biosynthesis","type":"exact"},{"name":"CD95L biosynthetic process","type":"exact"},{"name":"FASLG biosynthetic process","type":"exact"},{"name":"Fas-L biosynthetic process","type":"exact"},{"name":"FasL anabolism","type":"exact"},{"name":"FasL biosynthesis","type":"exact"},{"name":"FasL formation","type":"exact"},{"name":"FasL synthesis","type":"exact"},{"name":"fas ligand biosynthetic process","type":"exact"}],"termid":"GO:0045210"}


id: FYPO:0005966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal potassium import","synonyms":[{"name":"abnormal cellular potassium import","type":"exact"},{"name":"abnormal potassium import across plasma membrane","type":"exact"},{"name":"abnormal potassium import during mitotic cell cycle","type":"related"},{"name":"abnormal potassium import during vegetative growth","type":"exact"},{"name":"abnormal potassium import into cell","type":"exact"},{"name":"abnormal potassium ion import","type":"exact"}],"termid":"FYPO:0005966"}


id: GO:0033564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:kmv","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axon guidance","synonyms":[{"name":"anterior-posterior axon guidance","type":"exact"},{"name":"anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:0033564"}


id: GO:0042314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bacteriochlorophyll, a form of chlorophyll found in photosynthetic bacteria, such as the purple and green bacteria. There are several types, designated a to g. Bacteriochlorophyll a and bacteriochlorophyll b are structurally similar to the chlorophyll a and chlorophyll b found in plants.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll binding","termid":"GO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bacteriochlorophyll binding","termid":"GO:0042314"}


id: PBO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7","termid":"PBO:0090243"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: PBO:0084667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial alcohol dehydrogenase isozyme III; involved in the shuttling of mitochondrial NADH to the cytosol under anaerobic conditions and ethanol production","termid":"PBO:0084667"}


id: FYPO:0003081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased genetic imprinting at mating-type locus","synonyms":[{"name":"decreased genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased genetic imprinting at mating-type locus during vegetative growth","type":"exact"},{"name":"reduced genetic imprinting at mating-type locus","type":"exact"}],"termid":"FYPO:0003081"}


id: GO:0002488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class Ib molecule in the ER. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib","termid":"GO:0002476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"}],"termid":"GO:0002488"}


id: GO:0061036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cartilage development, the process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of cartilage development","termid":"GO:0061035"},{"relation_name":"positively_regulates","term_name":"cartilage development","termid":"GO:0051216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cartilage development","termid":"GO:0061036"}


id: GO:0102489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + 2 H2O = GMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP phosphohydrolase activity (obsolete GO:0102489)","termid":"GO:0102489"}


id: PBO:0062702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 1","termid":"PBO:0062702"}


id: PBO:0054101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1460","termid":"PBO:0054101"}


id: PBO:0077758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20L divergent transcript","termid":"PBO:0077758"}


id: GO:0043911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine + 2-oxoglutarate = L-glutamate + 6-amino-2-oxohexanoate.","definition_xrefs":["GOC:jl","PMID:17259313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"D-lysine transaminase activity","synonyms":[{"name":"D-lysine aminotransferase activity","type":"exact"}],"termid":"GO:0043911"}


id: PBO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 2, transcriptional regulator","termid":"PBO:0061698"}


id: PBO:0029017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere","termid":"PBO:0029017"}


id: GO:1990878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.","definition_xrefs":["PMID:10348814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to gastrin","termid":"GO:1990867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gastrin","termid":"GO:1990878"}


id: PBO:0073031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scratch family transcriptional repressor 1","termid":"PBO:0073031"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: FYPO:0005016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of acetyl groups to residues in an 18S rRNA molecule is abolished.","definition_xrefs":["PomBase:mah","PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rRNA modification","termid":"FYPO:0005015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"abolished 18S rRNA acetylation","synonyms":[{"name":"18S rRNA acetylation abolished","type":"exact"},{"name":"abolished 18S rRNA acetylation at C1297 and C1815","type":"narrow"},{"name":"abolished 18S rRNA acetylation during mitotic cell cycle","type":"related"},{"name":"abolished 18S rRNA acetylation during vegetative growth","type":"exact"},{"name":"abolished 18S rRNA acetylation on C1297 and C1815","type":"exact"},{"name":"abolished 18s rRNA cytidine (1297 and 1815) acetylation","type":"narrow"}],"termid":"FYPO:0005016"}


id: PBO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2 (predicted)","termid":"PBO:0002516"}


id: PBO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REreplication","termid":"PBO:0000353"}


id: GO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate pathway that contributes to terpenoid biosynthesis. This pathway converts acetate, in the form of acetyl-CoA, to isopentenyl diphosphate (IPP) through a series of mevalonate intermediates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"},{"relation_name":"part_of","term_name":"terpenoid biosynthetic process, mevalonate-dependent","termid":"GO:0051485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway involved in terpenoid biosynthetic process","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate pathway, during terpenoid anabolism","type":"related"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway, during terpenoid biosynthetic process","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid biosynthesis","type":"related"},{"name":"isopentenyl diphosphate formation, mevalonate pathway, during terpenoid formation","type":"related"},{"name":"isopentenyl diphosphate synthesis, mevalonate pathway, during terpenoid synthesis","type":"related"}],"termid":"GO:0051486"}


id: GO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"natural killer cell cytokine production","termid":"GO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of natural killer cell cytokine production","synonyms":[{"name":"regulation of NK cell cytokine production","type":"exact"}],"termid":"GO:0002727"}


id: GO:0016784
data:
  {"annotated_genes":["SJAG_04113"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112970],"is_not":false,"summary":null,"term":"GO:0016784"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate.","definition_xrefs":["EC:2.8.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"3-mercaptopyruvate sulfurtransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21740","MetaCyc:MERCAPYSTRANS-RXN","Reactome:R-HSA-9013533","Reactome:R-HSA-9012721","Reactome:R-HSA-9013471","Reactome:R-HSA-9034756"],"synonyms":[{"name":"3-mercaptopyruvate sulphurtransferase activity","type":"exact"},{"name":"3-mercaptopyruvate:cyanide sulfurtransferase activity","type":"related"},{"name":"beta-mercaptopyruvate sulfurtransferase activity","type":"related"},{"name":"mercaptopyruvate sulfurtransferase activity","type":"exact"}],"termid":"GO:0016784","terms_by_termid":{"GO:0016784":null}}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0053878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1154","termid":"PBO:0053878"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:18256290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: GO:0001139
data:
  {"annotated_genes":["SJAG_01707","SJAG_02691"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75424,77249],"is_not":false,"summary":null,"term":"GO:0001139"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase II (Pol II) complex, typically composed of twelve subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way in order to facilitate the aggregation, arrangement and bonding together of proteins on an RNA polymerase II promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription by RNA polymerase.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II complex binding","termid":"GO:0000993"},{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01707":null,"SJAG_02691":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0030674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase II complex recruiting activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"core RNA polymerase II recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, core RNA polymerase II recruiting","type":"related"}],"termid":"GO:0001139","terms_by_termid":{"GO:0001139":null}}


id: GO:0010929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"positively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010929"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["PMID:23150719","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: GO:0009094
data:
  {"annotated_genes":["SJAG_00518","SJAG_03124"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85936,104629],"is_not":false,"summary":null,"term":"GO:0009094"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-phenylalanine, the L-enantiomer of 2-amino-3-phenylpropanoic acid, i.e. (2S)-2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine metabolic process","termid":"GO:0006558"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process, prephenate pathway","termid":"GO:0009095"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","termid":"GO:1902223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00518":null,"SJAG_03124":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-phenylalanine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019274","GO:0019275"],"synonyms":[{"name":"L-phenylalanine anabolism","type":"exact"},{"name":"L-phenylalanine biosynthesis","type":"exact"},{"name":"L-phenylalanine formation","type":"exact"},{"name":"L-phenylalanine synthesis","type":"exact"},{"name":"phenylalanine biosynthesis","type":"broad"},{"name":"phenylalanine biosynthetic process","type":"broad"},{"name":"phenylalanine biosynthetic process, prephenate pathway","type":"related"},{"name":"phenylalanine biosynthetic process, shikimate pathway","type":"related"}],"termid":"GO:0009094","terms_by_termid":{"GO:0009094":null}}


id: PBO:0055015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2430","termid":"PBO:0055015"}


id: PBO:0056787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3 like","termid":"PBO:0056787"}


id: PBO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit (predicted)","termid":"PBO:0004490"}


id: PBO:0039311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 5, RNA demethylase","termid":"PBO:0039311"}


id: GO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity that contributes to the shape of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity","termid":"GO:0061172"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061160"}


id: GO:0071284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lead ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lead ion","termid":"GO:0010288"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lead ion","termid":"GO:0071284"}


id: PATO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's changed direction of position towards another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation","termid":"PATO:0002175"}


id: SO:0001345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:053"],"synonyms":[{"name":"2'-O-methyluridine","type":"exact"},{"name":"Um","type":"exact"},{"name":"two prime O methyluridine","type":"exact"}],"termid":"SO:0001345"}


id: GO:0032309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of icosanoids, any of a group of C20 polyunsaturated fatty acids from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"icosanoid secretion","synonyms":[{"name":"eicosanoid secretion","type":"exact"}],"termid":"GO:0032309"}


id: GO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"}


id: MOD:01591
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 304.205359 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.000001 Da","termid":"MOD:01515"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199-304.206 Da","termid":"MOD:01592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}


id: FYPO:0000352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology during vegetative growth","synonyms":[{"name":"abnormal cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"cytoskeleton morphology: abnormal","type":"related"}],"termid":"FYPO:0000352"}


id: PBO:0040287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 2","termid":"PBO:0040287"}


id: PBO:0003875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLTH domain","termid":"PBO:0003875"}


id: GO:0009212
data:
  {"annotated_genes":["SJAG_04665","SJAG_00885","SJAG_04627","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103287],"is_not":false,"summary":null,"term":"GO:0009212"},{"annotations":[85478,114009,88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate biosynthetic process","termid":"GO:0009148"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009212","terms_by_termid":{"GO:0006235":null,"GO:0009212":null}}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:31278118","PomBase:mah","PMID:29899117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0007477","FYPO:0001985"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: PBO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maturin, neural progenitor differentiation regulator homolog","termid":"PBO:0060170"}


id: GO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid (obsolete GO:0005561)","synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"GO:0005561"}


id: PBO:0042892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cripto, FRL-1, cryptic family 1","termid":"PBO:0042892"}


id: PBO:0028740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-L-ergothioneine_absent_from_cell","termid":"PBO:0028740"}


id: PBO:0088994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm5","termid":"PBO:0088994"}


id: PBO:0028685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_spindle_pole_body_separation","termid":"PBO:0028685"}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_04813","SJAG_00792","SJAG_04584","SJAG_02730","SJAG_00987","SJAG_03473","SJAG_04009","SJAG_00124","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89363,90793,102278,90132,100487,104828,79242,112089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[92456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003700","GO:0003674","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001220","GO:0001218","GO:0001141","GO:0001219"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: GO:1990978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416"],"gene_count":0,"genotype_count":0,"name":"obsolete response to viscosity (obsolete GO:1990978)","termid":"GO:1990978"}


id: PBO:0052547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor B1","termid":"PBO:0052547"}


id: GO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle development","synonyms":[{"name":"chitin-based cuticle anabolism","type":"exact"},{"name":"chitin-based cuticle biosynthetic process","type":"exact"},{"name":"chitin-based cuticle formation","type":"exact"},{"name":"chitin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040003"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_05009","SJAG_04497","SJAG_03983","SJAG_04911"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87642,94088,106669,109303],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_01437","SJAG_01116","SJAG_01168","SJAG_04417","SJAG_03247","SJAG_00053","SJAG_04221","SJAG_01564","SJAG_03170","SJAG_02626","SJAG_04413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97836,107684,114927,100416,114140,87560,93520,86500,114662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[100418,86501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[111214,103050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: PBO:0054165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1535","termid":"PBO:0054165"}


id: GO:0031468
data:
  {"annotated_genes":["SJAG_03783","SJAG_01242","SJAG_05207","SJAG_01467","SJAG_01745","SJAG_03892","SJAG_04489","SJAG_00900","SJAG_01050","SJAG_00416","SJAG_03891"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92705],"is_not":false,"summary":null,"term":"GO:0031468"},{"annotations":[102580,87422,92031,115597,115598,115599,99189,94026,115600,99778,84072,96943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"The reformation of the nuclear membranes following their breakdown in the context of a normal process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane reassembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope reassembly","type":"related"}],"termid":"GO:0031468","terms_by_termid":{"GO:0007084":null,"GO:0031468":null}}


id: PBO:0028182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercury","termid":"PBO:0028182"}


id: PBO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion","termid":"PBO:0086076"}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: PBO:0084625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionyl-tRNA synthetase; forms a complex with Gus1p, a glutamyl-tRNA synthetase, and Arc1p, which increases the catalytic efficiency of both synthetases; involved in the nuclear export of tRNAs; mutations in human ortholog MARS is associated with pediatric pulmonary alveolar proteinosis, interstitial lung and liver disease, and Charcot-Marie-Tooth disease; human MARS gene can complement the yeast null mutant","termid":"PBO:0084625"}


id: PBO:0113407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of vacuolar transporter chaperone (VTC) complex; involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion; important regulator of substrate invagination from the vacuolar membrane; targeted to vacuole via AP-3 pathway; VTC3 has a paralog, VTC2, that arose from the whole genome duplication","termid":"PBO:0113407"}


id: PBO:0081473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF346 intronic transcript 1","termid":"PBO:0081473"}


id: PATO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking affinity for water; tending to repel and not absorb water; tending not to dissolve in or mix with or be wetted by water.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrophobicity","termid":"PATO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophobic","termid":"PATO:0001885"}


id: PBO:0079684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination factor E4A","termid":"PBO:0079684"}


id: MOD:00363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-selenocysteine residues to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#SEC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"},{"relation_name":"is_a","term_name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Sec)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00363"}


id: PBO:0059961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 6","termid":"PBO:0059961"}


id: PBO:0039707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor like protein 2","termid":"PBO:0039707"}


id: PBO:0062427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 87 pseudogene","termid":"PBO:0062427"}


id: GO:0102246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aminodeoxyfutalosinate + H2O = dehypoxanthine futalosine + adenine.","definition_xrefs":["EC:3.2.2.30","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-amino-6-deoxyfutalosine hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12346","RHEA:33079"],"termid":"GO:0102246"}


id: PBO:0038886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase activating polypeptide 1","termid":"PBO:0038886"}


id: PBO:0075155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 11","termid":"PBO:0075155"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: PBO:0027406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sulfite_reductase_activity","termid":"PBO:0027406"}


id: GO:1902295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA replication, synthesis of RNA primer that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in cell cycle DNA replication (obsolete GO:1902295)","synonyms":[{"name":"DNA replication, synthesis of RNA primer involved in cell cycle DNA replication","type":"exact"},{"name":"replication priming involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902295"}


id: PR:P21534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22888:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.11","secondary_identifiers":["UniProtKB:P21534"],"synonyms":[{"name":"SPMIT.11","type":"related"},{"name":"Spom972h-MT-CO2","type":"exact"},{"name":"cytochrome c oxidase polypeptide II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21534"}


id: PBO:0044498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor B","termid":"PBO:0044498"}


id: FYPO:0003384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to chromium ions. Cells stop growing (and may die) at a concentration of chromium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to chromium","synonyms":[{"name":"hypersensitive to chromium","type":"exact"},{"name":"sensitive to chromium during mitotic cell cycle","type":"related"},{"name":"sensitive to chromium during vegetative growth","type":"exact"},{"name":"sensitive to chromium ions","type":"exact"}],"termid":"FYPO:0003384"}


id: PBO:0088248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase Rki1","termid":"PBO:0088248"}


id: PBO:0065230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR11 antisense RNA 1","termid":"PBO:0065230"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: GO:0010423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of brassinosteroids.","definition_xrefs":["PMID:16857903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of brassinosteroid biosynthetic process","termid":"GO:0010422"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"brassinosteroid biosynthetic process","termid":"GO:0016132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of brassinosteroid biosynthetic process","termid":"GO:0010423"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: GO:0071489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red or far red light","termid":"GO:0071489"}


id: PATO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001042 absolute amplitude (obsolete PATO:0001042)","termid":"PATO:0001042"}


id: PBO:0087015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR) small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; relocalizes from nucleus to cytoplasm upon DNA replication stress; RNR4 has a paralog, RNR2, that arose from the whole genome duplication","termid":"PBO:0087015"}


id: PBO:0068982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 226, pseudogene","termid":"PBO:0068982"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:jid","PMID:15157725","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: PBO:0012291
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YOR341W","termid":"PBO:0012291"}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity (obsolete GO:0102456)","termid":"GO:0102456"}


id: PATO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color saturation which is of high purity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color saturation","termid":"PATO:0000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high saturation","synonyms":[{"name":"bright ","type":"exact"},{"name":"vivid","type":"related"}],"termid":"PATO:0001229"}


id: GO:0048288
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84640],"is_not":false,"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus during the creation of a single nucleus from multiple nuclei.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane fusion","termid":"GO:0000740"},{"relation_name":"part_of","term_name":"karyogamy","termid":"GO:0000741"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane fusion involved in karyogamy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane fusion during karyogamy","type":"related"}],"termid":"GO:0048288","terms_by_termid":{"GO:0048288":null}}


id: PBO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1, 3 pseudogene","termid":"PBO:0071799"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0056062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper protein 2","termid":"PBO:0056062"}


id: GO:0102798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heptanal + O2 + H2O = H+ + heptanoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete heptaldehyde:oxygen oxidoreductase activity (obsolete GO:0102798)","termid":"GO:0102798"}


id: PBO:0044388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily AC member 1, pseudogene","termid":"PBO:0044388"}


id: PBO:0078389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-4","termid":"PBO:0078389"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: GO:0015989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of protons against an electrochemical gradient, using energy from light.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete light-driven proton transport (obsolete GO:0015989)","termid":"GO:0015989"}


id: PBO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_meiotic_cell_cycle","termid":"PBO:0034570"}


id: GO:0052614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NADH + O2 + uracil = (Z)-3-ureidoacrylate + FMN + H+ + H2O + NAD+. Can also use thymine as a substrate.","definition_xrefs":["PMID:20369853","PMID:20400551","RHEA:31587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"uracil oxygenase activity","secondary_identifiers":["EC:1.14.99.46","MetaCyc:RXN0-6444"],"synonyms":[{"name":"pyrimidine oxygenase activity","type":"broad"}],"termid":"GO:0052614"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: GO:0043872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lysine(out) + cadaverine(in) = lysine(in) + cadaverine(out).","definition_xrefs":["GOC:jl","PMID:10986235","TC:2.A.3.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"lysine:cadaverine antiporter activity","secondary_identifiers":["GO:0015490","GO:0015497"],"synonyms":[{"name":"cadaverine transmembrane transporter activity","type":"narrow"},{"name":"cadaverine:lysine antiporter activity","type":"exact"},{"name":"lysine-cadaverine antiporter activity","type":"exact"},{"name":"lysine/cadaverine antiporter activity","type":"exact"}],"termid":"GO:0043872"}


id: PBO:0076803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4","termid":"PBO:0076803"}


id: PBO:0065355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 5","termid":"PBO:0065355"}


id: PBO:0084478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type locus; note that the systematic sequence in SGD contains MATalpha sequences","termid":"PBO:0084478"}


id: PATO:0000103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000103 micronutrient sensitivity (obsolete PATO:0000103)","termid":"PATO:0000103"}


id: GO:0033436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"AUG codon-amino acid adaptor activity","synonyms":[{"name":"ATG codon-amino acid adaptor activity","type":"exact"},{"name":"initiator methionine tRNA","type":"related"},{"name":"methionine tRNA","type":"related"}],"termid":"GO:0033436"}


id: GO:0010316
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric complex that catalyzes the pyrophosphate-dependent phosphorylation of D-fructose 6-phosphate into D-fructose 1,6-bisphosphate.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex","synonyms":[{"name":"PFK complex","type":"related"}],"termid":"GO:0010316"}


id: PBO:0081572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF497 antisense RNA 1","termid":"PBO:0081572"}


id: GO:0033402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"UUC codon-amino acid adaptor activity","synonyms":[{"name":"TTC codon-amino acid adaptor activity","type":"exact"},{"name":"phenylalanine tRNA","type":"related"}],"termid":"GO:0033402"}


id: PBO:0073706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI8 subunit of superkiller complex","termid":"PBO:0073706"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["RHEA:62316","MetaCyc:RXN-11659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: PBO:0040691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA2 and CDKN1A interacting protein","termid":"PBO:0040691"}


id: GO:1900963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanophenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of methanophenazine biosynthetic process","termid":"GO:1900962"},{"relation_name":"is_a","term_name":"negative regulation of methanophenazine metabolic process","termid":"GO:1900966"},{"relation_name":"negatively_regulates","term_name":"methanophenazine biosynthetic process","termid":"GO:1900630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanophenazine biosynthetic process","synonyms":[{"name":"down regulation of methanophenazine anabolism","type":"exact"},{"name":"down regulation of methanophenazine biosynthesis","type":"exact"},{"name":"down regulation of methanophenazine biosynthetic process","type":"exact"},{"name":"down regulation of methanophenazine formation","type":"exact"},{"name":"down regulation of methanophenazine synthesis","type":"exact"},{"name":"down-regulation of methanophenazine anabolism","type":"exact"},{"name":"down-regulation of methanophenazine biosynthesis","type":"exact"},{"name":"down-regulation of methanophenazine biosynthetic process","type":"exact"},{"name":"down-regulation of methanophenazine formation","type":"exact"},{"name":"down-regulation of methanophenazine synthesis","type":"exact"},{"name":"downregulation of methanophenazine anabolism","type":"exact"},{"name":"downregulation of methanophenazine biosynthesis","type":"exact"},{"name":"downregulation of methanophenazine biosynthetic process","type":"exact"},{"name":"downregulation of methanophenazine formation","type":"exact"},{"name":"downregulation of methanophenazine synthesis","type":"exact"},{"name":"inhibition of methanophenazine anabolism","type":"exact"},{"name":"inhibition of methanophenazine biosynthesis","type":"exact"},{"name":"inhibition of methanophenazine biosynthetic process","type":"narrow"},{"name":"inhibition of methanophenazine formation","type":"exact"},{"name":"inhibition of methanophenazine synthesis","type":"exact"},{"name":"negative regulation of methanophenazine anabolism","type":"exact"},{"name":"negative regulation of methanophenazine biosynthesis","type":"exact"},{"name":"negative regulation of methanophenazine formation","type":"exact"},{"name":"negative regulation of methanophenazine synthesis","type":"exact"}],"termid":"GO:1900963"}


id: PBO:0056216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEB17 antisense RNA 1","termid":"PBO:0056216"}


id: PBO:0059243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14","termid":"PBO:0059243"}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: GO:0014729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates velocity of shortening of a skeletal muscle contraction. The shortening leads to reduction of the length of muscle fibers and sarcomeres.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by chemo-mechanical energy conversion","termid":"GO:0014862"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the velocity of shortening of skeletal muscle modulating contraction","synonyms":[{"name":"regulation of the velocity of shortening of skeletal muscle during contraction","type":"related"}],"termid":"GO:0014729"}


id: PBO:0087816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa1p, for ribosomal protein gene transcription in vivo; homologous to smallest subunit of human and Drosophila TFIIA; protein abundance increases in response to DNA replication stress","termid":"PBO:0087816"}


id: GO:1904062
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87295,109381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["PMID:15304482","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cation transmembrane transport","type":"broad"}],"termid":"GO:1904062","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:1900858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brevianamide F biosynthetic process (obsolete GO:1900858)","synonyms":[{"name":"regulation of brevianamide F anabolism","type":"exact"},{"name":"regulation of brevianamide F biosynthesis","type":"exact"},{"name":"regulation of brevianamide F formation","type":"exact"},{"name":"regulation of brevianamide F synthesis","type":"exact"}],"termid":"GO:1900858"}


id: PBO:0077027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated family member 2","termid":"PBO:0077027"}


id: MOD:01032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a benzyloxymethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzyloxymethyl modified residue","synonyms":[{"name":"Bom","type":"exact"}],"termid":"MOD:01032"}


id: GO:0038071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in conjugation with cellular fusion (obsolete GO:0038071)","synonyms":[{"name":"MAPK activity involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0038071"}


id: PBO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A/B","termid":"PBO:0050393"}


id: PBO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polysaccharide_level","termid":"PBO:0030720"}


id: PBO:0054661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2067","termid":"PBO:0054661"}


id: PBO:0067543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 689, pseudogene","termid":"PBO:0067543"}


id: PBO:0073716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 3","termid":"PBO:0073716"}


id: PBO:0084823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, regulator of COB mRNA stability and translation; interacts with the 5'-untranslated region of the COB mRNA; found in a complex at the inner membrane along with Pet309p; localizes to mitochondrial foci upon DNA replication stress","termid":"PBO:0084823"}


id: PBO:0077162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 3, transcriptional corepressor","termid":"PBO:0077162"}


id: PBO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mRNA processing body, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0016070"}


id: PATO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape resembling an anchor.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor-shaped","termid":"PATO:0002446"}


id: PATO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation emitting quality which obtains by the intensity of the bearer emitted radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation emitting intensity quality","termid":"PATO:0001717"}


id: PBO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB3 pseudogene 1","termid":"PBO:0045906"}


id: PBO:0077601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11C, pseudogene","termid":"PBO:0077601"}


id: PBO:0064054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 88","termid":"PBO:0064054"}


id: PBO:0087507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of HDA1 histone deacetylase complex; tetrameric trichostatin A-sensitive class II histone deacetylase complex contains Hda1p homodimer and an Hda2p-Hda3p heterodimer; required for activity of complex; relocalizes to cytosol in response to hypoxia; similar to Hda2p; the HDA1 histone deacetylase complex regulates aging through trehalose metabolism","termid":"PBO:0087507"}


id: PBO:0047062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120B","termid":"PBO:0047062"}


id: PBO:0057591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 920","termid":"PBO:0057591"}


id: PBO:0087569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH and nucleotide excision repair factor 3 complexes; involved in transcription initiation, required for nucleotide excision repair; ring finger protein similar to mammalian CAK and TFIIH subunit","termid":"PBO:0087569"}


id: GO:0007267
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111587],"is_not":false,"summary":null,"term":"GO:0007267"}]},"cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell-cell signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell-cell signalling","type":"exact"}],"termid":"GO:0007267","terms_by_termid":{"GO:0007267":null}}


id: GO:0051307
data:
  {"annotated_genes":["SJAG_04259","SJAG_00145","SJAG_03327","SJAG_01837","SJAG_02542","SJAG_04126","SJAG_01330","SJAG_02104","SJAG_01515","SJAG_01082","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113569],"is_not":false,"summary":null,"term":"GO:0051307"},{"annotations":[110509,102339],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[89949,106204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051755"},{"annotations":[97844,112685,102340],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[94752],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[109808],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[91227],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[97383],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"The process in which chromosomes are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome separation","termid":"GO:0051304"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02104":null,"SJAG_02542":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chromosome separation during meiosis","type":"exact"},{"name":"meiotic chromosome resolution","type":"exact"}],"termid":"GO:0051307","terms_by_termid":{"GO:0033316":null,"GO:0051307":null,"GO:0051755":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0067094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 131, pseudogene","termid":"PBO:0067094"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 1","termid":"PBO:0052021"}


id: PBO:0110324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Yt blood group)","termid":"PBO:0110324"}


id: MOD:00306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 113.084064 Da.","definition_xrefs":["PubMed:10523135","RESID:AA0301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.084064 Da","synonyms":[{"name":"L-isoleucine or L-leucine","type":"exact"},{"name":"Xle","type":"exact"}],"termid":"MOD:00306"}


id: GO:0170043
data:
  {"annotated_genes":["SJAG_00695","SJAG_00635","SJAG_02972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[106527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[107930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_00695":null,"SJAG_02972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"non-proteinogenic amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid anabolism","type":"exact"},{"name":"non-proteinogenic amino acid formation","type":"exact"},{"name":"non-proteinogenic amino acid synthesis","type":"exact"},{"name":"non-proteinogenic biosynthesis","type":"exact"}],"termid":"GO:0170043","terms_by_termid":{"GO:0006592":null,"GO:0019240":null,"GO:0071269":null}}


id: PR:O42973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20F10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.03","synonyms":[{"name":"Spom972h-SPBC20F10.03","type":"exact"}],"termid":"PR:O42973"}


id: PBO:0077990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transformer 2 beta homolog","termid":"PBO:0077990"}


id: PBO:0078711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-6","termid":"PBO:0078711"}


id: PBO:0065643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 21","termid":"PBO:0065643"}


id: FYPO:0003847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h- mating type.","definition_xrefs":["PomBase:mah","PMID:24727291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"h- specific sterility","synonyms":[{"name":"h--specific sterility","type":"exact"},{"name":"h-minus-specific mating defect","type":"related"},{"name":"h-minus-specific sterility","type":"exact"}],"termid":"FYPO:0003847"}


id: SO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a nucleotide polymer that has no terminal nucleotide residues.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topology_attribute","termid":"SO:0000986"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular","synonyms":[{"name":"zero-ended","type":"related"}],"termid":"SO:0000988"}


id: PBO:0043773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 2","termid":"PBO:0043773"}


id: PBO:0080721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT signaling pathway activating non-coding RNA","termid":"PBO:0080721"}


id: PBO:0053344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 222","termid":"PBO:0053344"}


id: GO:1902796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GO_REF:0000058","PMID:24210919","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of snoRNA metabolic process","termid":"GO:1903323"},{"relation_name":"regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016074"],"is_obsolete":false,"name":"regulation of snoRNA processing","termid":"GO:1902796"}


id: GO:0071478
data:
  {"annotated_genes":["SJAG_02818","SJAG_03898","SJAG_00814","SJAG_00863","SJAG_05197","SJAG_04150","SJAG_01648","SJAG_04190","SJAG_02334","SJAG_02200","SJAG_02199","SJAG_00272","SJAG_01010","SJAG_02182","SJAG_00729","SJAG_05242","SJAG_02860","SJAG_04877","SJAG_01262","SJAG_00208","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[115237,115236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[91303,105131,100958,98874],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[84127,89726,93192,101965,85676,91128,92085,108852,106844,108299,103006,107443,100276,91337,90034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to radiation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"cellular response to electromagnetic radiation stimulus","type":"exact"},{"name":"cellular response to radiation stimulus","type":"exact"}],"termid":"GO:0071478","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: MOD:01595
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-114 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01595"}


id: PBO:0004815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp20 (predicted)","termid":"PBO:0004815"}


id: PBO:0082881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyanamide hydratase that detoxifies cyanamide; member of the HD domain metalloprotein superfamily; expression is induced over 100-fold by cyanamide and by SN2-type DNA alkylating agents such as MMS and DMA; induction decreased in rad6 and rad18 mutants; gene and protein are identical to DDI2 and Ddi2p","termid":"PBO:0082881"}


id: PR:O42906
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21231:SF1","OMA:SCHPO02574","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.15","secondary_identifiers":["UniProtKB:O42906"],"synonyms":[{"name":"Spom972h-GPN1","type":"exact"}],"termid":"PR:O42906"}


id: PBO:0040689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain amino acid transaminase 1","termid":"PBO:0040689"}


id: PBO:0052770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 62","termid":"PBO:0052770"}


id: PATO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000162 absolute rate (obsolete PATO:0000162)","termid":"PATO:0000162"}


id: GO:0009389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethyl sulfoxide + H+ = dimethyl sulfide + H2O.","definition_xrefs":["PMID:8658134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase activity","synonyms":[{"name":"dimethyl sulphoxide reductase activity","type":"exact"}],"termid":"GO:0009389"}


id: GO:2000742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior head development","termid":"GO:2000742"}


id: GO:0019140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + myo-inositol = ADP + 1D-myo-inositol 3-phosphate.","definition_xrefs":["EC:2.7.1.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"inositol 3-kinase activity","secondary_identifiers":["RHEA:21804","MetaCyc:MYO-INOSITOL-1-KINASE-RXN"],"synonyms":[{"name":"ATP:myo-inositol 1-phosphotransferase activity","type":"related"},{"name":"inositol 1-kinase activity","type":"related"},{"name":"inositol-1-kinase (phosphorylating)","type":"related"},{"name":"myo-inositol 1-kinase activity","type":"related"},{"name":"myo-inositol 3-kinase activity","type":"exact"},{"name":"myoinositol kinase activity","type":"broad"}],"termid":"GO:0019140"}


id: PR:000028947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reduced form in Schizosaccharomyces pombe. The reduced Cys are Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Red+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: thioredoxin-1 reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TXN/Red+","type":"exact"},{"name":"trx1/Red+","type":"exact"}],"termid":"PR:000028947"}


id: PR:P41889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00544","PANTHER:PTHR12558:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit cut9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.15c","secondary_identifiers":["UniProtKB:P41889"],"synonyms":[{"name":"20S cyclosome/APC complex protein cut9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC16","type":"exact"},{"name":"cell untimely torn protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41889"}


id: GO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an arterial endothelial cell fate and its capacity to differentiate into an arterial endothelial cell.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"arterial endothelial cell differentiation","termid":"GO:0060842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell fate commitment","termid":"GO:0060844"}


id: PBO:0072356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 42","termid":"PBO:0072356"}


id: PBO:0068664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 45, pseudogene","termid":"PBO:0068664"}


id: PBO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transporter family protein (predicted)","termid":"PBO:0005817"}


id: PBO:0055836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRFN5 divergent transcript","termid":"PBO:0055836"}


id: GO:0005277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of acetylcholine from one side of a membrane to the other. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"acetate ester transmembrane transporter activity","termid":"GO:1901375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"acetylcholine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-264615"],"termid":"GO:0005277"}


id: FYPO:0000984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to pheromone","termid":"FYPO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transcriptional response to pheromone","synonyms":[{"name":"abnormal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0000984"}


id: FYPO:0003474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which nucleus is broken into multiple small fragments that are smaller than a normal nucleus, hen the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"fragmented nucleus during cellular response to salt stress","synonyms":[{"name":"fragmented nuclear DNA during cellular response to salt stress","type":"related"},{"name":"fragmented nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"loss of nuclear integrity during cellular response to salt stress","type":"related"}],"termid":"FYPO:0003474"}


id: GO:0005773
data:
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closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. 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id: PBO:0090347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA mimic/ribosome assembly chaperone for Rps14","termid":"PBO:0090347"}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: GO:0006306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.","definition_xrefs":["GOC:ems","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation (obsolete GO:0006306)","secondary_identifiers":["Wikipedia:DNA_methylation"],"termid":"GO:0006306"}


id: PR:Q09769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Lon protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00272","PANTHER:PTHR10046:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.06c","secondary_identifiers":["UniProtKB:Q09769"],"synonyms":[{"name":"Spom972h-LONP1","type":"exact"}],"termid":"PR:Q09769"}


id: GO:0140024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endosome towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an endosome to a microtubule, and ends when the endosome reaches its final destination.","definition_xrefs":["PMID:24803650","PMID:25706234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plus-end-directed vesicle transport along microtubule","termid":"GO:0072383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"plus-end-directed endosome transport along mitotic spindle midzone microtubule","termid":"GO:0140024"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: GO:0033037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a polysaccharide is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"polysaccharide localization","synonyms":[{"name":"polysaccharide localisation","type":"exact"}],"termid":"GO:0033037"}


id: PBO:0053259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIF interleukin 6 family cytokine","termid":"PBO:0053259"}


id: GO:0018342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:di","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"prenylation","termid":"GO:0097354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein prenylation","secondary_identifiers":["GO:0018346"],"synonyms":[{"name":"C-terminal protein prenylation","type":"narrow"},{"name":"protein amino acid prenylation","type":"exact"}],"termid":"GO:0018342"}


id: PBO:0085426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase essential for mitotic cell cycle; controls targeting, activation of Rho1p at cell division site via Rho1p guanine nucleotide exchange factors; regulates shape of nucleus, expansion of nuclear envelope during mitosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; human homologs PLK1, PLK3 can each complement cdc5 thermosensitive mutants","termid":"PBO:0085426"}


id: FYPO:0007776
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115080,115473,115485,115489,115494,115497,115528,115531,115537],"is_not":false,"summary":null,"term":"FYPO:0007776"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are shorter than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal 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hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04697","SJAG_02013","SJAG_04551","SJAG_00124","SJAG_02527"],"single_locus_genotype_uniquenames":["SJAG_00124delta","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta","pmk1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","gms1delta","pyp1delta"],"synonyms":[{"name":"short hyphae","type":"exact"}],"termid":"FYPO:0007776","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007776":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:1905933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate determination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25793578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate determination","termid":"GO:1905933"}


id: GO:0036492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a phosphate group on to the translation initiation factor eIF2alpha, as a result of endoplasmic reticulum stress.","definition_xrefs":["PMID:14676213","PMID:16835242","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","synonyms":[{"name":"eiF2alpha phosphorylation in response to ER stress","type":"exact"},{"name":"regulation of translation initiation by eiF2alpha phosphorylation in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0036492"}


id: GO:0102975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol acetate + NADP = versiconal hemiacetal acetate + NADPH.","definition_xrefs":["EC:1.1.1.353","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"versiconal hemiacetal acetate reductase activity","secondary_identifiers":["RHEA:35695","MetaCyc:RXN-9490"],"termid":"GO:0102975"}


id: PBO:0061094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 3","termid":"PBO:0061094"}


id: GO:1901276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tartrate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"tartrate metabolic process","termid":"GO:1901275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tartrate catabolic process","synonyms":[{"name":"tartrate breakdown","type":"exact"},{"name":"tartrate catabolism","type":"exact"},{"name":"tartrate degradation","type":"exact"}],"termid":"GO:1901276"}


id: GO:0048282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of determinate inflorescences are generated and organized. A determinate inflorescence is one that can only produce a predetermined number of floral meristems.","definition_xrefs":["GOC:jid","PMID:9553044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflorescence morphogenesis","termid":"GO:0048281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determinate inflorescence morphogenesis","termid":"GO:0048282"}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: PBO:0039484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A7, pseudogene","termid":"PBO:0039484"}


id: GO:1905102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:26265044","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of apoptosome assembly","termid":"GO:1905100"},{"relation_name":"positively_regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptosome assembly","synonyms":[{"name":"activation of apoptosome assembly","type":"narrow"},{"name":"activation of apoptosome formation","type":"narrow"},{"name":"positive regulation of apoptosome formation","type":"exact"},{"name":"up regulation of apoptosome assembly","type":"exact"},{"name":"up regulation of apoptosome formation","type":"exact"},{"name":"up-regulation of apoptosome assembly","type":"exact"},{"name":"up-regulation of apoptosome formation","type":"exact"},{"name":"upregulation of apoptosome assembly","type":"exact"},{"name":"upregulation of apoptosome formation","type":"exact"}],"termid":"GO:1905102"}


id: PBO:0087243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protein phosphatase involved in formation of FAR complex; inhibits mitophagy by dephosphorylating Atg32p; required for glycogen accumulation; interacts with Tap42p, which binds to and regulates other protein phosphatases","termid":"PBO:0087243"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: GO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIIIB-beta complex that contains the TATA-binding protein (TBP), B'' and BRF, and is involved in the regulation of transcription from type 2 RNA polymerase III promoters.","definition_xrefs":["PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIIB complex","termid":"GO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIB-beta complex","termid":"GO:0034733"}


id: GO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of a metal into a metallo-molybdopterin complex.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-molybdopterin complex","termid":"GO:0042040"}


id: GO:0071854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process involved in cell wall disassembly","termid":"GO:0070910"},{"relation_name":"part_of","term_name":"fungal-type cell wall disassembly","termid":"GO:0071853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in fungal-type cell wall disassembly","termid":"GO:0071854"}


id: PBO:0059224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 6","termid":"PBO:0059224"}


id: PBO:0040587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 2","termid":"PBO:0040587"}


id: FYPO:0005449
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_02252:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02252","name":"ace2delta","uniquename":"SJAG_02252:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 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id: GO:0046649
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id: GO:0033433
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id: PBO:0077042
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id: PBO:0013750
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id: PBO:0049399
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id: PBO:0078865
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id: PBO:0038487
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id: GO:0000377
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id: GO:0015990
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id: GO:0060546
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id: SO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombination product between the 2 LTR of the same element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solo_LTR","synonyms":[{"name":"solo LTR","type":"exact"}],"termid":"SO:0001003"}


id: GO:0044526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-cystine residue in a protein by the transfer of a sulfur atom from a free cysteine (in the process converting the free cysteine to alanine) to the peptidyl-cysteine to form peptidyl-cysteine persulfide.","definition_xrefs":["GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cystine sulfhydration","termid":"GO:0044525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of peptidyl-cystine persulfide by sulphur transfer from free cysteine","termid":"GO:0044526"}


id: FYPO:0005803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the lateral part of the cell occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell side","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell side during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell side during vegetative growth","type":"exact"},{"name":"decreased rate of protein movement within plasma membrane at lateral part of cell","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell side","type":"exact"},{"name":"slow protein movement within plasma membrane at cell side","type":"exact"}],"termid":"FYPO:0005803"}


id: PBO:0069091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 338, pseudogene","termid":"PBO:0069091"}


id: GO:0051054
data:
  {"annotated_genes":["SJAG_03160","SJAG_00995","SJAG_03048","SJAG_00364","SJAG_03695","SJAG_03720","SJAG_00823","SJAG_03438","SJAG_00100","SJAG_03624","SJAG_02074","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[108058,113277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[99373,108059,113278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[103431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[102638,98426,112250,85164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98429,104378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[98430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[88246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"},{"annotations":[85165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[93258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving DNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"positively_regulates","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00823":null,"SJAG_00995":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03624":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA metabolic process","type":"narrow"},{"name":"positive regulation of DNA metabolism","type":"exact"},{"name":"stimulation of DNA metabolic process","type":"narrow"},{"name":"up regulation of DNA metabolic process","type":"exact"},{"name":"up-regulation of DNA metabolic process","type":"exact"},{"name":"upregulation of DNA metabolic process","type":"exact"}],"termid":"GO:0051054","terms_by_termid":{"GO:0010845":null,"GO:0010846":null,"GO:0032215":null,"GO:0045739":null,"GO:0045951":null,"GO:1903465":null,"GO:1903468":null,"GO:1904514":null,"GO:1905263":null,"GO:2001034":null}}


id: GO:0031218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans.","definition_xrefs":["GOC:mlg","EC:3.2.1.89"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"arabinogalactan endo-1,4-beta-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.89-RXN"],"synonyms":[{"name":"arabinogalactan 4-beta-D-galactanohydrolase activity","type":"related"},{"name":"arabinogalactanase activity","type":"exact"},{"name":"endo-1,4-beta-galactanase activity","type":"exact"},{"name":"galactanase activity","type":"exact"}],"termid":"GO:0031218"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","PMID:22269326","GOC:BHF","GOC:rph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: SO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"rRNA is an RNA component of a ribosome that can provide both structural scaffolding and catalytic activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_primary_transcript","termid":"SO:0000209"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/RRNA"],"synonyms":[{"name":"INSDC_feature:rRNA","type":"exact"},{"name":"INSDC_qualifier:unknown","type":"broad"},{"name":"ribosomal RNA","type":"exact"},{"name":"ribosomal ribonucleic acid","type":"exact"}],"termid":"SO:0000252"}


id: PBO:0066349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras converting CAAX endopeptidase 1","termid":"PBO:0066349"}


id: GO:0031806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) histamine receptor.","definition_xrefs":["GOC:mah","GOC:nln","PMID:12679144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"G protein-coupled histamine receptor binding","synonyms":[{"name":"G-protein coupled histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor binding","type":"exact"},{"name":"metabotropic histamine receptor ligand","type":"narrow"}],"termid":"GO:0031806"}


id: PBO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.3.-","termid":"PBO:0001805"}


id: GO:0033363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule organization","synonyms":[{"name":"secretory granule organisation","type":"exact"},{"name":"secretory granule organization and biogenesis","type":"related"}],"termid":"GO:0033363"}


id: GO:0006692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostanoid metabolic process","synonyms":[{"name":"prostanoid metabolism","type":"exact"}],"termid":"GO:0006692"}


id: PBO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VB pseudogene 3","termid":"PBO:0060338"}


id: PBO:0073577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 8","termid":"PBO:0073577"}


id: GO:0072000
data:
  {"annotated_genes":["SJAG_02718","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90090,107337],"is_not":false,"summary":null,"term":"GO:0072000"},{"annotations":[107335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072316"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of polysaccharides in the ascus wall that contributes to the release of ascospores from the ascus.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide catabolic process","termid":"GO:0071999"},{"relation_name":"part_of","term_name":"ascospore release from ascus","termid":"GO:0071998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01017":null,"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"extracellular polysaccharide catabolic process involved in ascospore release from ascus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascus catabolic process","type":"related"},{"name":"ascus endolysis","type":"related"},{"name":"extracellular polysaccharide breakdown involved in ascospore release from ascus","type":"exact"},{"name":"extracellular polysaccharide catabolism involved in ascospore release from ascus","type":"exact"},{"name":"extracellular polysaccharide degradation involved in ascospore release from ascus","type":"exact"}],"termid":"GO:0072000","terms_by_termid":{"GO:0072000":null,"GO:0072316":null}}


id: RO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a specifically dependent continuant and a generically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. Multiple specifically dependent continuants can concretize the same generically dependent continuant.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concretizes","termid":"RO:0000059"}


id: PBO:0064995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 2","termid":"PBO:0064995"}


id: PBO:0058509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5699","termid":"PBO:0058509"}


id: PBO:0073050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 8","termid":"PBO:0073050"}


id: PBO:0031757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromere","termid":"PBO:0031757"}


id: GO:0033615
data:
  {"annotated_genes":["SJAG_01503","SJAG_04899","SJAG_01838","SJAG_06135","SJAG_07008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85148,92912,96734,105746,112671],"is_not":false,"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase in the mitochondrial inner membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex assembly","termid":"GO:0043461"},{"relation_name":"part_of","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0007005"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033615","terms_by_termid":{"GO:0033615":null}}


id: PBO:0080616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 53","termid":"PBO:0080616"}


id: PBO:0085244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the ER; catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER; CPR5 has a paralog, CPR2, that arose from the whole genome duplication","termid":"PBO:0085244"}


id: PBO:0059771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 45","termid":"PBO:0059771"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: PBO:0113502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase; catalyzes the final step in tRNA splicing, transferring the 2'-PO(4) from the splice junction to NAD(+), forming ADP-ribose 1''-2''cyclic phosphate and nicotinamide; ADP-ribosyltransferase that ADP-ribosylates 5'-phosphorylated ssDNA and ssRNAs; human and mouse orthologs complement the inviability of the yeast null mutant","termid":"PBO:0113502"}


id: PBO:0013813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phophatidylinositol 3-kinase complex subunit Vps38","termid":"PBO:0013813"}


id: GO:0052541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose metabolic process","termid":"GO:0030243"},{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall cellulose metabolic process","synonyms":[{"name":"cell wall cellulose metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall cellulose metabolic process","type":"exact"}],"termid":"GO:0052541"}


id: PBO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein","termid":"PBO:0000081"}


id: PBO:0092037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid (uuc), mitochondrial","termid":"PBO:0092037"}


id: GO:0098949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic endosome membrane (obsolete GO:0098949)","synonyms":[{"name":"intrinsic to postsynaptic endosome membrane","type":"narrow"}],"termid":"GO:0098949"}


id: PR:Q9P6I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc16 gene.","definition_xrefs":["UniProtKB:Q9P6I1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.09","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc16","type":"exact"},{"name":"ubiquitin carrier protein 16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6I1"}


id: PBO:0047296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 3","termid":"PBO:0047296"}


id: PBO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(10)(q11.2)","termid":"PBO:0047922"}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: PBO:0089364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1","termid":"PBO:0089364"}


id: PBO:0073461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein B","termid":"PBO:0073461"}


id: PBO:0036038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_dimethylation_at_protein_coding_gene_during_vegetative_growth","termid":"PBO:0036038"}


id: PBO:0064377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component","termid":"PBO:0064377"}


id: FYPO:0001662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular cAMP level","termid":"FYPO:0001660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cAMP level during glucose starvation","synonyms":[{"name":"decreased cellular cAMP accumulation during glucose starvation","type":"related"},{"name":"decreased cellular cAMP level during glucose depletion","type":"exact"},{"name":"decreased cellular cAMP level during glucose deprivation","type":"exact"},{"name":"decreased cellular cAMP level during glucose limitation","type":"related"},{"name":"decreased cellular cyclic AMP level during cellular response to glucose starvation","type":"exact"},{"name":"reduced cellular cAMP level during glucose starvation","type":"exact"}],"termid":"FYPO:0001662"}


id: PBO:0042277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8 pseudogene 1","termid":"PBO:0042277"}


id: PBO:0030524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_S_phase_of_meiotic_cell_cycle","termid":"PBO:0030524"}


id: PBO:0062764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily R member 1","termid":"PBO:0062764"}


id: PBO:0040961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 32","termid":"PBO:0040961"}


id: PBO:0112468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, for APC Ubc11/UbcP4","termid":"PBO:0112468"}


id: PBO:0090315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease","termid":"PBO:0090315"}


id: GO:0019793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of ISG15 (interferon-stimulated gene-15) from one side of the membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ISG15 carrier activity (obsolete GO:0019793)","synonyms":[{"name":"ISG15 carrier activity","type":"exact"},{"name":"interferon-stimulated gene-15 carrier activity","type":"narrow"}],"termid":"GO:0019793"}


id: GO:0010220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or induces the rate of the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vernalization response","termid":"GO:0010219"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"vernalization response","termid":"GO:0010048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vernalization response","synonyms":[{"name":"activation of vernalization response","type":"narrow"},{"name":"stimulation of vernalization response","type":"narrow"},{"name":"up regulation of vernalization response","type":"exact"},{"name":"up-regulation of vernalization response","type":"exact"},{"name":"upregulation of vernalization response","type":"exact"}],"termid":"GO:0010220"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: GO:0021918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of spinal cord motor neurons to specific motor neuron types along the anterior-posterior axis.","definition_xrefs":["PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment (obsolete GO:0021918)","termid":"GO:0021918"}


id: FYPO:0005809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form astral microtubules that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"short astral microtubules","synonyms":[{"name":"short astral microtubules during mitotic cell cycle","type":"related"},{"name":"short astral microtubules during vegetative growth","type":"exact"},{"name":"short cytoplasmic astral microtubules","type":"exact"}],"termid":"FYPO:0005809"}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: GO:0010057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of a trichoblast.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell fate specification","termid":"GO:0090628"},{"relation_name":"part_of","term_name":"trichoblast differentiation","termid":"GO:0010054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast fate specification","termid":"GO:0010057"}


id: GO:0047478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + ATP + NH4 = L-asparagine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:14197","EC:6.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"aspartate-ammonia ligase (ADP-forming) activity","secondary_identifiers":["KEGG_REACTION:R00482","MetaCyc:6.3.1.4-RXN"],"synonyms":[{"name":"L-aspartate:ammonia ligase (ADP-forming)","type":"related"},{"name":"asparagine synthetase (ADP-forming) activity","type":"related"},{"name":"asparagine synthetase (adenosine diphosphate-forming)","type":"related"}],"termid":"GO:0047478"}


id: PBO:0080903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 3","termid":"PBO:0080903"}


id: PR:Q9UQW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-CoA acetyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR18919:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.09c","secondary_identifiers":["UniProtKB:Q9UQW6"],"synonyms":[{"name":"SPBC215.09c","type":"related"},{"name":"Spom972h-ACAT1","type":"exact"},{"name":"acetoacetyl-CoA thiolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UQW6"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: PBO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein","termid":"PBO:0051635"}


id: PBO:0003436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk27 (predicted)","termid":"PBO:0003436"}


id: PBO:0035978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035978"}


id: GO:0017141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic susceptibility/resistance (obsolete GO:0017141)","synonyms":[{"name":"antibiotic susceptibility/resistance","type":"exact"}],"termid":"GO:0017141"}


id: PBO:0083425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YAL027W and the verified gene DRS2","termid":"PBO:0083425"}


id: PBO:0068980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 224, pseudogene","termid":"PBO:0068980"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: PBO:0056532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 1","termid":"PBO:0056532"}


id: PBO:0080718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and SOCS box containing 2","termid":"PBO:0080718"}


id: PBO:0043348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase like 1","termid":"PBO:0043348"}


id: PBO:0030203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030203"}


id: PBO:0011109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome remodeling protein Spt6","termid":"PBO:0011109"}


id: GO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor that recognizes and binds a histone protein containing a ubiquitination modification and that brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:24526689","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-modified protein reader activity","termid":"GO:0140036"},{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0140566","GO:0003674","GO:0005488","GO:0060090","GO:0005515","GO:0030674"],"is_obsolete":false,"name":"ubiquitin-modified histone reader activity","synonyms":[{"name":"ubiquitin modification-dependent histone binding","type":"exact"},{"name":"ubiquitinated histone binding","type":"related"}],"termid":"GO:0061649"}


id: GO:0140721
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[84944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a nuclease.","definition_xrefs":["PMID:28785032","PMID:29554913","PMID:30046034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140678","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"nuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140721","terms_by_termid":{"GO:0008428":null,"GO:0060698":null}}


id: GO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->6)-alpha-D-mannosyloligosaccharide + beta-D-mannosylphosphodecaprenol = (1->6)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-oligosaccharide + decaprenol phosphate.","definition_xrefs":["MetaCyc:2.4.1.199-RXN","EC:2.4.1.199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-mannosylphosphodecaprenol-mannooligosaccharide 6-mannosyltransferase activity","synonyms":[{"name":"beta-D-mannosylphosphodecaprenol:1,6-alpha-D-mannosyloligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"mannosylphospholipid-methylmannoside alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0047252"}


id: PBO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology and distribution","termid":"PBO:0002611"}


id: GO:0005385
data:
  {"annotated_genes":["SJAG_01078","SJAG_03528","SJAG_01990","SJAG_01803","SJAG_00328","SJAG_04185","SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86541,89843,89844,97278,100360,110357],"is_not":false,"summary":null,"term":"GO:0005385"},{"annotations":[100222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000006"}]},"cv_name":"molecular_function","definition":"Enables the transfer of zinc (Zn) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"zinc ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-442393","Reactome:R-HSA-5654125","Reactome:R-HSA-442422","Reactome:R-HSA-435375","Reactome:R-HSA-442387","RHEA:29351","Reactome:R-HSA-437085","Reactome:R-HSA-9820566","Reactome:R-HSA-442405","Reactome:R-HSA-442345","Reactome:R-HSA-435366","Reactome:R-HSA-442317","Reactome:R-HSA-437084","Reactome:R-HSA-437136","Reactome:R-HSA-437139","MetaCyc:RXN0-12"],"synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"related"},{"name":"zinc, cadmium uptake permease activity","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"},{"name":"zinc, iron permease activity","type":"narrow"}],"termid":"GO:0005385","terms_by_termid":{"GO:0000006":null,"GO:0005385":null}}


id: PBO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cycloisomerase 2 family","termid":"PBO:0003892"}


id: PBO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 4","termid":"PBO:0071748"}


id: PBO:0066687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 2","termid":"PBO:0066687"}


id: PBO:0089058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMP70 family endosomal transport protein/Nonaspanin-like","termid":"PBO:0089058"}


id: GO:0035552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["GOC:rl","PMID:18775698","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded DNA demethylation (obsolete GO:0035552)","synonyms":[{"name":"oxidative ssDNA demethylation","type":"exact"}],"termid":"GO:0035552"}


id: PBO:0017744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein, unknown role","termid":"PBO:0017744"}


id: GO:0120045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a stereocilium in a stable functional or structural state.","definition_xrefs":["GOC:krc","PMID:27693694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stereocilium maintenance","termid":"GO:0120045"}


id: PR:O74135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cki3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.05","synonyms":[{"name":"Spom972h-cki3","type":"exact"}],"termid":"PR:O74135"}


id: PBO:0083448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BUD31","termid":"PBO:0083448"}


id: PR:O74824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"Spom972h-gtr1","type":"exact"}],"termid":"PR:O74824"}


id: PBO:0067956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 258","termid":"PBO:0067956"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: GO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic death of B cells which is part of B cell tolerance induction.","definition_xrefs":["GOC:add","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell deletion","synonyms":[{"name":"B lymphocyte deletion","type":"exact"},{"name":"B-cell deletion","type":"exact"},{"name":"B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002516"}


id: GO:0043647
data:
  {"annotated_genes":["SJAG_04870","SJAG_00244","SJAG_01154","SJAG_02321","SJAG_03409","SJAG_00321","SJAG_01702","SJAG_04067","SJAG_01148","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67257,102928,102929,111056],"is_not":false,"summary":null,"term":"GO:0043647"},{"annotations":[84826,101220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[94848,111054,113014,89445,114801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[111055,84827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02321":null,"SJAG_03409":null,"SJAG_04067":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate metabolism","type":"exact"},{"name":"myo-inositol phosphate metabolic process","type":"narrow"},{"name":"myo-inositol phosphate metabolism","type":"narrow"}],"termid":"GO:0043647","terms_by_termid":{"GO:0032958":null,"GO:0043647":null,"GO:0071543":null,"GO:0071545":null}}


id: PBO:0082001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 2","termid":"PBO:0082001"}


id: PBO:0080353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 7 pseudogene","termid":"PBO:0080353"}


id: GO:0070759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-35-mediated signaling pathway","termid":"GO:0070758"},{"relation_name":"negatively_regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070759"}


id: GO:0000471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 3'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, endonucleolytic cleavage within the 3'-ETS of the pre-RNA, which may occur cotranscriptionally, is the first step in rRNA processing, and initiates a cascade of subsequent processing and modification events.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage in 3'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000471"}


id: SO:0002024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The leftmost segment of homology in the HML and MAT mating loci, but not present in HMR.","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"W_region","secondary_identifiers":["SO:0002000"],"synonyms":[{"name":"W-region","type":"exact"}],"termid":"SO:0002024"}


id: PATO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased rate","synonyms":[{"name":"fast rate","type":"exact"},{"name":"high rate","type":"exact"}],"termid":"PATO:0000912"}


id: PBO:0047041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member B","termid":"PBO:0047041"}


id: MOD:01494
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["OMSSA:171","Unimod:533#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115K","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01494"}


id: GO:0033895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of poly(U) to fragments terminated by 3'-hydroxy and 5'-phosphate groups.","definition_xrefs":["EC:3.1.26.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ribonuclease [poly-(U)-specific] activity","synonyms":[{"name":"ribonuclease (uracil-specific) activity","type":"related"},{"name":"uracil-specific RNase activity","type":"related"},{"name":"uracil-specific endoribonuclease activity","type":"related"}],"termid":"GO:0033895"}


id: PBO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_fasciculating_neuron_projection","termid":"PBO:0034172"}


id: FYECO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing non-fermentable carbon sources. Please note that more specific terms exist, such as glycerol and ethanol rich medium that can be used if this is known.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fermentable carbon sources medium","termid":"FYECO:0000213"}


id: PBO:0091688
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Itsy-Bitsy Phosphatase","termid":"PBO:0091688"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: GO:0002904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"positively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell apoptotic process","synonyms":[{"name":"activation of B cell apoptosis","type":"narrow"},{"name":"positive regulation of B cell apoptosis","type":"narrow"},{"name":"stimulation of B cell apoptosis","type":"narrow"},{"name":"up regulation of B cell apoptosis","type":"exact"},{"name":"up-regulation of B cell apoptosis","type":"exact"},{"name":"upregulation of B cell apoptosis","type":"exact"}],"termid":"GO:0002904"}


id: PBO:0018100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase Pan5 (predicted)","termid":"PBO:0018100"}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: GO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.","definition_xrefs":["PMID:18050467","WB_REF:WBPaper00002109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"turning behavior involved in mating","synonyms":[{"name":"turning behavior during mating","type":"exact"}],"termid":"GO:0034607"}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: PBO:0050225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 3","termid":"PBO:0050225"}


id: PBO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 12","termid":"PBO:0062042"}


id: PBO:0040732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor like 1","termid":"PBO:0040732"}


id: PBO:0083979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl hydrolase required for beta-1,6-glucan biosynthesis; type II integral membrane protein that localizes to ER, plasma membrane, sites of polarized growth and secretory vesicles; functionally redundant with Skn1p; KRE6 has a paralog, SKN1, that arose from the whole genome duplication","termid":"PBO:0083979"}


id: FYPO:0002268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate-ammonia ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished glutamate-ammonia ligase activity","synonyms":[{"name":"abolished GS activity","type":"exact"},{"name":"abolished glutamine synthetase activity","type":"exact"},{"name":"abolished glutamylhydroxamic synthetase activity","type":"exact"},{"name":"glutamate-ammonia ligase activity abolished","type":"exact"}],"termid":"FYPO:0002268"}


id: PBO:0036314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nrd1 complex ATP-dependent 5' to 3' DNA/RNA helicase Sen1","termid":"PBO:0036314"}


id: PBO:0067003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 7, pseudogene","termid":"PBO:0067003"}


id: PBO:0081832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 766","termid":"PBO:0081832"}


id: GO:0071934
data:
  {"annotated_genes":["SJAG_04673","SJAG_00835","SJAG_02962","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86238,86239,96728],"is_not":false,"summary":null,"term":"GO:0071934"},{"annotations":[99689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"}]},"cv_name":"biological_process","definition":"The process in which thiamine is transported across a membrane. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine transport","termid":"GO:0015888"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound transmembrane transport","termid":"GO:0072531"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"thiamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transmembrane transport","type":"exact"},{"name":"thiamine membrane transport","type":"exact"},{"name":"vitamin B1 transmembrane transport","type":"exact"}],"termid":"GO:0071934","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: GO:0048640
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of developmental growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of developmental growth","type":"exact"},{"name":"down-regulation of developmental growth","type":"exact"},{"name":"downregulation of developmental growth","type":"exact"},{"name":"inhibition of developmental growth","type":"narrow"}],"termid":"GO:0048640","terms_by_termid":{"GO:0051517":null}}


id: PBO:0040452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP11A antisense RNA 1","termid":"PBO:0040452"}


id: GO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methyloctanoyl-CoA = 4-methyloct-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0924"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-methyloctanoyl-CoA dehydrogenase activity (obsolete GO:0034580)","termid":"GO:0034580"}


id: PBO:0050059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, Z (pseudogene)","termid":"PBO:0050059"}


id: FYPO:0007278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to euchromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17289569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to euchromatin","synonyms":[{"name":"normal protein localisation to euchromatin","type":"exact"},{"name":"normal protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007278"}


