# terms

id: SO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that derives from another organism, via the use of recombinant DNA technology.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"insertion","termid":"SO:0000667"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_insertion","synonyms":[{"name":"transgenic insertion","type":"exact"}],"termid":"SO:0001218"}


id: GO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-8 production","termid":"GO:0032677"},{"relation_name":"positively_regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-8 production","secondary_identifiers":["GO:0045416","GO:2000484"],"synonyms":[{"name":"activation of interleukin-8 production","type":"narrow"},{"name":"positive regulation of IL-8 production","type":"exact"},{"name":"positive regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-8 secretion","type":"narrow"},{"name":"stimulation of interleukin-8 production","type":"narrow"},{"name":"up regulation of interleukin-8 production","type":"exact"},{"name":"up-regulation of interleukin-8 production","type":"exact"},{"name":"upregulation of interleukin-8 production","type":"exact"}],"termid":"GO:0032757"}


id: GO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone biosynthetic process (obsolete GO:0046212)","synonyms":[{"name":"methyl ethyl ketone anabolism","type":"exact"},{"name":"methyl ethyl ketone biosynthesis","type":"exact"},{"name":"methyl ethyl ketone biosynthetic process","type":"exact"},{"name":"methyl ethyl ketone formation","type":"exact"},{"name":"methyl ethyl ketone synthesis","type":"exact"}],"termid":"GO:0046212"}


id: PBO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 22","termid":"PBO:0050205"}


id: MOD:02031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(4) HexNAc(5)","definition_xrefs":["PubMed:33135055","Unimod:1519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex1Hex4HexNAc5 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(4) HexNAc(5)","type":"related"}],"termid":"MOD:02031"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: PBO:0059151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 3","termid":"PBO:0059151"}


id: PBO:0071998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7","termid":"PBO:0071998"}


id: PBO:0111894
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0111894"}


id: PBO:0002900
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.-.-.-","termid":"PBO:0002900"}


id: PATO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000879 fecundity value (obsolete PATO:0000879)","termid":"PATO:0000879"}


id: GO:0140201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urea from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transport","termid":"GO:0071918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"urea import across plasma membrane","termid":"GO:0140201"}


id: CHEBI:16356
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic GMP","termid":"CHEBI:16356"}


id: PBO:0071402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 8","termid":"PBO:0071402"}


id: PBO:0084401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine methyltransferase; involved in the dimethylation of eEF1A (Tef1p/Tef2p) at lysine 316; sequence similarity to S-adenosylmethionine-dependent methyltransferases of the seven beta-strand family; role in vesicular transport","termid":"PBO:0084401"}


id: PBO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B antisense RNA 1","termid":"PBO:0039519"}


id: PBO:0047544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 3","termid":"PBO:0047544"}


id: PBO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1","termid":"PBO:0051030"}


id: GO:0007170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transmembrane receptor protein tyrosine kinase ligand binding (obsolete GO:0007170)","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase ligand binding","type":"exact"}],"termid":"GO:0007170"}


id: GO:0062031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A MAPK cascade containing at least the Kss1 MAP kinase. It starts with the activation of Ste20, a MAP4K, which activates Ste11, a MAP3K, which in turn activate Ste7, a MAP2K, which activates Kss1. The kinases in each tier phosphorylate and activate the kinases in the downstream tier. The filamentous growth MAPK cascade is activated as a result of partial nutrient deprivation and  results in filamentous growth.","definition_xrefs":["PMID:33335117","PMID:17604854","PMID:38187743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"filamentous growth MAPK cascade","termid":"GO:0062031"}


id: GO:0034306
data:
  {"annotated_genes":["SJAG_04853","SJAG_04140","SJAG_00993","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[98340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[88260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore formation from the products of meiosis. An example of this is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation","termid":"GO:0043937"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle","termid":"GO:0051445"},{"relation_name":"regulates","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of sexual sporulation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"},{"name":"regulation of meiotic spore formation","type":"exact"},{"name":"regulation of meiotic sporulation","type":"exact"},{"name":"regulation of sexual spore formation","type":"exact"}],"termid":"GO:0034306","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0010934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a macrophage cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage cytokine production","termid":"GO:0010934"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: PBO:0087579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex (APC); APC is an E3 ubiquitin ligase that regulates the metaphase-anaphase transition and exit from mitosis; required for activation of the daughter-specific gene expression and spore wall maturation","termid":"PBO:0087579"}


id: PBO:0064895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'alpha","termid":"PBO:0064895"}


id: PBO:0070591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 57","termid":"PBO:0070591"}


id: GO:0002100
data:
  {"annotated_genes":["SJAG_04380","SJAG_00352","SJAG_04189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97163,99996,100282],"is_not":false,"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"The process in which an adenosine in position 34 of a tRNA is post-transcriptionally converted to inosine.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"},{"relation_name":"is_a","term_name":"adenosine to inosine editing","termid":"GO:0006382"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA wobble adenosine to inosine editing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002100","terms_by_termid":{"GO:0002100":null}}


id: GO:0030968
data:
  {"annotated_genes":["SJAG_00226","SJAG_04103","SJAG_02601","SJAG_01768","SJAG_04118","SJAG_04471","SJAG_03841","SJAG_04435","SJAG_04283","SJAG_03482","SJAG_03611","SJAG_00790","SJAG_04262","SJAG_01516","SJAG_00681","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85765,89014,90565,94769,97286,103198,105586,109831,110094,110225,112040,112793,113229,113382],"is_not":false,"summary":null,"term":"GO:0030968"},{"annotations":[85617,89161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036498"}]},"cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation.","definition_xrefs":["GOC:mah","PMID:12042763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"part_of","term_name":"cellular response to unfolded protein","termid":"GO:0034620"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00530":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01516":null,"SJAG_01768":null,"SJAG_02601":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endoplasmic reticulum unfolded protein response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER unfolded protein response","type":"exact"},{"name":"SREBP-mediated signalling pathway","type":"related"},{"name":"erUPR","type":"exact"}],"termid":"GO:0030968","terms_by_termid":{"GO:0030968":null,"GO:0036498":null}}


id: GO:0042954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein transporter activity (obsolete GO:0042954)","termid":"GO:0042954"}


id: PBO:0064171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group V","termid":"PBO:0064171"}


id: GO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a cytosine residue in DNA, forming a uracil residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA deamination","termid":"GO:0045006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA cytosine deamination","termid":"GO:0070383"}


id: PBO:0027569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_arrest_with_septated_mononucleate_cell","termid":"PBO:0027569"}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: PBO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf2","termid":"PBO:0005757"}


id: PBO:0039765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin","termid":"PBO:0039765"}


id: GO:0047946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + L-glutamine = CoA + N-acyl-L-glutamine.","definition_xrefs":["EC:2.3.1.68","MetaCyc:GLUTAMINE-N-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"glutamine N-acyltransferase activity","secondary_identifiers":["RHEA:18469"],"synonyms":[{"name":"acyl-CoA:L-glutamine N-acyltransferase activity","type":"related"}],"termid":"GO:0047946"}


id: GO:0014914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast cell to attain its fully functional state involved in muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast maturation","termid":"GO:0048628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation involved in muscle regeneration","termid":"GO:0014914"}


id: PBO:0083874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein subunit of SCF ubiquitin ligase complex; substrate-specific adaptor subunit that recruits substrates to a core ubiquitination complex","termid":"PBO:0083874"}


id: PBO:0091894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf4","termid":"PBO:0091894"}


id: PBO:0089906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase, KAT5 family Mst1","termid":"PBO:0089906"}


id: PBO:0088851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family","termid":"PBO:0088851"}


id: PBO:0086429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hydrolase acting on ester bonds","termid":"PBO:0086429"}


id: GO:0030134
data:
  {"annotated_genes":["SJAG_04402","SJAG_00357","SJAG_00785","SJAG_05345","SJAG_01939","SJAG_03907","SJAG_04592","SJAG_04740","SJAG_03153","SJAG_01633","SJAG_04196","SJAG_02539","SJAG_00557","SJAG_02349","SJAG_00284","SJAG_02120","SJAG_02264","SJAG_05344","SJAG_01642","SJAG_01991","SJAG_04002","SJAG_05013","SJAG_04112","SJAG_04598","SJAG_02839","SJAG_04023","SJAG_04513","SJAG_03270","SJAG_03933","SJAG_00767","SJAG_00072","SJAG_00906","SJAG_03558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86364,87601,89205,90326,90455,91680,92153,99317,100317,103325,104437,106765,110343,111607,112353,112530,112972,114781],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[106224,89421,70315,104746,107995,112608,108734,91578,102583,74117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[97128,105817,110208,91617,104046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:17499046","PMID:8004676","Wikipedia:COPII","PMID:22160157","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0140045","GO:0030138"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: GO:0060482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lobar bronchus from an initial condition to its mature state. This process begins with the formation of the lobar bronchus and ends with the mature structure. The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchus development","termid":"GO:0060433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lobar bronchus development","termid":"GO:0060482"}


id: GO:0035939
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92130],"is_not":false,"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to a microsatellite, a repeat_region in DNA containing repeat units (2 to 4 base pairs) that is repeated multiple times in tandem.","definition_xrefs":["SO:0000289","PMID:21290414","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"satellite DNA binding","termid":"GO:0003696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"microsatellite binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"VNTR binding","type":"exact"},{"name":"microsatellite DNA binding","type":"exact"},{"name":"variable number tandem repeat binding","type":"exact"}],"termid":"GO:0035939","terms_by_termid":{"GO:0035939":null}}


id: PBO:0029642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_calcium_during_cellular_hypotonic_response","termid":"PBO:0029642"}


id: PBO:0061102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLGN4Y antisense RNA 1","termid":"PBO:0061102"}


id: PBO:0090884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex tRNA uridine(34) acetyltransferase subunit Elp3","termid":"PBO:0090884"}


id: PBO:0083397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORFs YPR169W-A and YPR170W-B","termid":"PBO:0083397"}


id: GO:0008730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate = H2O + oxaloacetate.","definition_xrefs":["EC:4.2.1.32","RHEA:15413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L(+)-tartrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00339","MetaCyc:LTARTDEHYDRA-RXN"],"synonyms":[{"name":"(R,R)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(R,R)-tartrate hydro-lyase activity","type":"related"},{"name":"L-(+)-tartaric acid dehydratase activity","type":"related"},{"name":"L-tartrate dehydratase activity","type":"related"},{"name":"tartaric acid dehydrase activity","type":"related"},{"name":"tartrate dehydratase activity","type":"related"}],"termid":"GO:0008730"}


id: GO:0042182
data:
  {"annotated_genes":["SJAG_04404","SJAG_02988","SJAG_04674","SJAG_04726","SJAG_02106","SJAG_01596","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98842,96374,88516,108833,84089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[101071,60527,58851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ketone breakdown","type":"exact"},{"name":"ketone catabolism","type":"exact"},{"name":"ketone degradation","type":"exact"}],"termid":"GO:0042182","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: GO:0031159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mah","GOC:pg","PMID:5002049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"activation of aggregate size","type":"narrow"},{"name":"stimulation of aggregate size","type":"narrow"},{"name":"up regulation of aggregate size","type":"exact"},{"name":"up-regulation of aggregate size","type":"exact"},{"name":"upregulation of aggregate size","type":"exact"}],"termid":"GO:0031159"}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: GO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R1 (TNF-related apoptosis inducing ligand receptor 1), which engages a caspase-dependent apoptotic pathway.","definition_xrefs":["PMID:9311998","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 1 biosynthetic process (obsolete GO:0045558)","synonyms":[{"name":"TRAIL receptor 1 anabolism","type":"exact"},{"name":"TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"TRAIL receptor 1 formation","type":"exact"},{"name":"TRAIL receptor 1 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10A biosynthetic process","type":"exact"}],"termid":"GO:0045558"}


id: GO:0034021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a silicon dioxide stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to silicon dioxide","synonyms":[{"name":"response to silica","type":"exact"},{"name":"response to silox","type":"exact"}],"termid":"GO:0034021"}


id: GO:0015662
data:
  {"annotated_genes":["SJAG_04258","SJAG_03866","SJAG_01129","SJAG_01435","SJAG_04167","SJAG_01400","SJAG_02399","SJAG_01669","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97071,111100],"is_not":false,"summary":null,"term":"GO:0015662"},{"annotations":[104692,97682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[103883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[103884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[108372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[108373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[109797,83819,83820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[108374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate.","definition_xrefs":["PMID:10600683","PMID:10322420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type transmembrane transporter activity","termid":"GO:0140358"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01129":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01669":null,"SJAG_02399":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04167":null,"SJAG_04258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type ion transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism","type":"exact"},{"name":"P-type ATPase activity","type":"exact"},{"name":"ion transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"narrow"}],"termid":"GO:0015662","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008900":null,"GO:0015662":null,"GO:0043682":null,"GO:0140581":null}}


id: GO:0051874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate catabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate catabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate catabolism","type":"exact"}],"termid":"GO:0051874"}


id: GO:1901494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of cysteine metabolic process","synonyms":[{"name":"regulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901494"}


id: GO:1990005
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic membrane-bounded vesicle of varying size, but usually larger than 45 nm, with an electron dense granular core, found in noradrenergic and peptidergic cells.","definition_xrefs":["NIF_Subcellular:sao478230652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"granular vesicle","termid":"GO:1990005"}


id: PBO:0063927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3R5 divergent transcript","termid":"PBO:0063927"}


id: GO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JNKK + ATP = JNKK phosphate + ADP. This reaction is the phosphorylation and activation of JUN kinase kinases (JNKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase activity","termid":"GO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0003824","GO:0016301","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"JUN kinase kinase kinase activity","synonyms":[{"name":"JNK kinase kinase activity","type":"related"},{"name":"JNKKK","type":"exact"}],"termid":"GO:0004706"}


id: PBO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR5A antisense RNA 1","termid":"PBO:0050796"}


id: PBO:0058214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4506","termid":"PBO:0058214"}


id: PBO:0091886
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/KM 2.3x10^4 min-1 M-1","termid":"PBO:0091886"}


id: PBO:0083400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF VMS1/YDR049W","termid":"PBO:0083400"}


id: PBO:0086588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis; YLR156W has a paralog, YLR159W, that arose from a segmental duplication","termid":"PBO:0086588"}


id: PBO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105B","termid":"PBO:0044807"}


id: GO:1901162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound biosynthetic process","synonyms":[{"name":"primary amino compound anabolism","type":"exact"},{"name":"primary amino compound biosynthesis","type":"exact"},{"name":"primary amino compound formation","type":"exact"},{"name":"primary amino compound synthesis","type":"exact"}],"termid":"GO:1901162"}


id: FYPO:0007014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5.8S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mature 5.8S rRNA level","synonyms":[{"name":"normal 5.8S rRNA level","type":"broad"},{"name":"normal mature 5.8S rRNA accumulation","type":"related"},{"name":"normal mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5.8S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007014"}


id: PBO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 24","termid":"PBO:0050322"}


id: PBO:0054886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2300","termid":"PBO:0054886"}


id: GO:0047969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + O2 = H2O2 + H+ + oxalate.","definition_xrefs":["RHEA:14837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyoxylate oxidase activity","secondary_identifiers":["EC:1.2.3.5","MetaCyc:GLYOXYLATE-OXIDASE-RXN","Reactome:R-HSA-389862","KEGG_REACTION:R00466"],"synonyms":[{"name":"glyoxylate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0047969"}


id: PBO:0111444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd1","termid":"PBO:0111444"}


id: GO:0000149
data:
  {"annotated_genes":["SJAG_04909","SJAG_00072","SJAG_00826","SJAG_01925","SJAG_05345","SJAG_02811","SJAG_03403","SJAG_01748","SJAG_05344","SJAG_04023","SJAG_04978","SJAG_03963","SJAG_01697","SJAG_03499","SJAG_03536","SJAG_02241","SJAG_02349","SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70313,70933,72576,73713,74115,74545,75108,75164,75243,76579,77274],"is_not":false,"summary":null,"term":"GO:0000149"},{"annotations":[68796,74321,75429,68891,76894,78454,75214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019905"}]},"cv_name":"molecular_function","definition":"Binding to a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein.","definition_xrefs":["PMID:12642621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00826":null,"SJAG_01309":null,"SJAG_01697":null,"SJAG_01748":null,"SJAG_01925":null,"SJAG_02241":null,"SJAG_02349":null,"SJAG_02811":null,"SJAG_03403":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04909":null,"SJAG_04978":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SNARE binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-210430","Reactome:R-HSA-380574","Reactome:R-HSA-380901","Reactome:R-HSA-9023173","Reactome:R-HSA-210426","Reactome:R-HSA-265166","Reactome:R-HSA-380905","Reactome:R-HSA-888589","Reactome:R-HSA-372505","Reactome:R-HSA-376369","Reactome:R-HSA-380869","Reactome:R-HSA-376357","Reactome:R-HSA-917744","Reactome:R-HSA-374899","Reactome:R-HSA-372529","Reactome:R-HSA-374922","Reactome:R-HSA-376364"],"synonyms":[{"name":"SNAP receptor binding","type":"exact"}],"termid":"GO:0000149","terms_by_termid":{"GO:0000149":null,"GO:0019905":null}}


id: GO:0016878
data:
  {"annotated_genes":["SJAG_02741","SJAG_00947","SJAG_01524","SJAG_03813","SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[111769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[101628,109442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[101629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[111770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[101630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[86016,110985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of an acid and a thiol via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:mah","EC:6.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-sulfur bonds","termid":"GO:0016877"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_01524":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"acid-thiol ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016878","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0031956":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:0016938
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99931,104266],"is_not":false,"summary":null,"term":"GO:0016938"}]},"cv_name":"cellular_component","definition":"A complex of two kinesin heavy chains and two kinesin light chains.","definition_xrefs":["PMID:20930137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"kinesin I complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016938","terms_by_termid":{"GO:0016938":null}}


id: PATO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the repetitiveness of bearer's rhythm.","definition_xrefs":["reference.com:reference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistence","termid":"PATO:0000082"}


id: MOD:00383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue to form 2-imino-glutamic acid 5-imidazolinone glycine.","definition_xrefs":["PubMed:11682051","RESID:AA0378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-glutamic acid 5-imidazolinone glycine","synonyms":[{"name":"2,N-didehydroglutamyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(3-carboxy-1-iminopropyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-glutamyl-5-imidazolinone glycine","type":"exact"},{"name":"4-[1-(carboxymethyl)-5-oxo-4,5-dihydro-1H-imidazol-2-yl]-4-iminobutanoic acid","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Glu-Gly)","type":"exact"},{"name":"[2-(3-carboxy-1-iminopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00383"}


id: GO:0061463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction O-acetyl-ADP-ribose + H2O = ADP-ribose + acetate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O-acetyl-ADP-ribose deacetylase activity","termid":"GO:0061463"}


id: PBO:0057777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2392","termid":"PBO:0057777"}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: GO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an adenylyl group (adenosine 5'-monophosphate; AMP) from a protein amino acid.","definition_xrefs":["GOC:sp","PMID:21734656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein denucleotidylation","termid":"GO:0044601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deadenylylation","synonyms":[{"name":"protein deAMPylation","type":"exact"}],"termid":"GO:0044602"}


id: PR:O74306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.09c","synonyms":[{"name":"Spom972h-rpl502","type":"exact"}],"termid":"PR:O74306"}


id: GO:1904297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of osmolarity-sensing cation channel activity","termid":"GO:1904295"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of osmolarity-sensing cation channel activity","synonyms":[{"name":"activation of osmolarity-sensing cation channel activity","type":"narrow"},{"name":"up regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"up-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"upregulation of osmolarity-sensing cation channel activity","type":"exact"}],"termid":"GO:1904297"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: PBO:0055718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leishmanolysin like peptidase","termid":"PBO:0055718"}


id: PBO:0077822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3","termid":"PBO:0077822"}


id: GO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the chambers of the heart expand in size, contributing to their shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber ballooning","termid":"GO:0003242"}


id: FYPO:0007932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of hydroxyurea and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of hydroxyurea and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to hydroxyurea and methyl methanesulfonate","synonyms":[{"name":"sensitive to hydroxyurea and MMS","type":"exact"}],"termid":"FYPO:0007932"}


id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: PBO:0056025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 3","termid":"PBO:0056025"}


id: FYPO:0000282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a high temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at high temperature (obsolete FYPO:0000282)","synonyms":[{"name":"cell viable at high temperature","type":"exact"},{"name":"viable cell at high temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at high temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0000282"}


id: PBO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myristoyl-CoA_ligase_activity","termid":"PBO:0030315"}


id: FYPO:0003766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial DNA molecules are interlinked by unresolved recombination junctions.","definition_xrefs":["PomBase:mah","PMID:10954073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000661","FYPO:0005447","FYPO:0000641","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"aggregated mtDNA","synonyms":[{"name":"aggregated mitochondrial DNA","type":"exact"},{"name":"aggregated mitochondrial chromosomes","type":"exact"},{"name":"aggregated mtDNA during mitotic cell cycle","type":"related"},{"name":"aggregated mtDNA during vegetative growth","type":"exact"},{"name":"fused mitochondrial chromosomes","type":"related"},{"name":"fused mtDNA","type":"related"},{"name":"interlinked mtDNA","type":"exact"}],"termid":"FYPO:0003766"}


id: GO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.250","RHEA:17389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.250-RXN","KEGG_REACTION:R07134"],"synonyms":[{"name":"D-arabinitol 2-dehydrogenase (ribulose-forming) activity","type":"related"},{"name":"D-arabinitol:NAD+ 2-oxidoreductase (D-ribulose-forming)","type":"related"}],"termid":"GO:0047038"}


id: PBO:0091993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leucine transmembrane transporter Agp3","termid":"PBO:0091993"}


id: PBO:0059394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S27","termid":"PBO:0059394"}


id: GO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-ascorbic acid binding","synonyms":[{"name":"L-ascorbate binding","type":"exact"},{"name":"vitamin C binding","type":"exact"}],"termid":"GO:0031418"}


id: PBO:0080712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 16","termid":"PBO:0080712"}


id: GO:0010609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression after the production of a mRNA transcript by its transport into, or maintenance in, a specific location within the cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization","termid":"GO:0008298"},{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051179"],"is_obsolete":false,"name":"mRNA localization resulting in post-transcriptional regulation of gene expression","synonyms":[{"name":"mRNA localisation resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"mRNA localization resulting in posttranscriptional regulation of gene expression","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localisation","type":"exact"},{"name":"posttranscriptional regulation of gene expression by mRNA localization","type":"exact"}],"termid":"GO:0010609"}


id: GO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA metabolic process (obsolete GO:0034660)","synonyms":[{"name":"ncRNA metabolism","type":"exact"}],"termid":"GO:0034660"}


id: GO:0060319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive erythrocyte differentiation","synonyms":[{"name":"primitive RBC differentiation","type":"exact"},{"name":"primitive erythropoiesis","type":"exact"},{"name":"primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060319"}


id: GO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A respiratory chain located in the plasma membrane of a cell; made up of the protein complexes that form the electron transport system (the respiratory chain), associated with the plasma membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["GOC:mah","ISBN:0198547684","GOC:curators","GOC:imk"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respirasome (obsolete GO:0070470)","synonyms":[{"name":"plasma membrane electron transport chain","type":"exact"},{"name":"plasma membrane respiratory chain","type":"exact"}],"termid":"GO:0070470"}


id: GO:1990377
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix consisting of a densely packed organomineral assembly in which the mineral phase represents the majority of the material by weight.","definition_xrefs":["GOC:jh2","PMID:15994301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organomineral extracellular matrix","termid":"GO:1990377"}


id: PBO:0071010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 12","termid":"PBO:0071010"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: _global:immediately_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"immediately_precedes","termid":"_global:immediately_precedes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_upstream_of","secondary_identifiers":["RO:0002412"],"termid":"_global:immediately_causally_upstream_of"}


id: PBO:0066774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 72","termid":"PBO:0066774"}


id: GO:0048678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an axon injury stimulus.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to wounding","termid":"GO:0009611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to axon injury","termid":"GO:0048678"}


id: GO:0042766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of nucleosomes along a DNA fragment.","definition_xrefs":["PMID:12006495"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome mobilization (obsolete GO:0042766)","synonyms":[{"name":"nucleosome sliding","type":"exact"}],"termid":"GO:0042766"}


id: PBO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 4","termid":"PBO:0046023"}


id: PBO:0064617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 7","termid":"PBO:0064617"}


id: PBO:0046395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L1 antisense RNA 1","termid":"PBO:0046395"}


id: FYPO:0001376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular calcium level during cellular response to salt stress","synonyms":[{"name":"normal cellular calcium accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"normal cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001376"}


id: PBO:0048820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 4","termid":"PBO:0048820"}


id: MOD:01220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:286#E","PubMed:9254591","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site E","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01220"}


id: GO:0098560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of late endosome membrane","synonyms":[{"name":"external leaflet of late endosome membrane","type":"exact"},{"name":"external side of late endosome membrane","type":"exact"}],"termid":"GO:0098560"}


id: GO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of the N-terminal pyroglutamyl group from a peptide or protein.","definition_xrefs":["GOC:mah","PMID:9920379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"omega peptidase activity","termid":"GO:0008242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"pyroglutamyl-peptidase activity","termid":"GO:0016920"}


id: PBO:0038309
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_degradation","termid":"PBO:0038309"}


id: GO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules).","definition_xrefs":["PMID:11535622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"junctional membrane complex","synonyms":[{"name":"triad junction","type":"broad"}],"termid":"GO:0030314"}


id: PBO:0035854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_nucleosome-depleted_regions_during_vegetative_growth","termid":"PBO:0035854"}


id: PBO:0067115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 159, pseudogene","termid":"PBO:0067115"}


id: PBO:0044287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51A","termid":"PBO:0044287"}


id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: FYECO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3'5'-cyclic AMP was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["CHEBI:17489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,5-cyclic AMP","termid":"FYECO:0000056"}


id: PR:P78817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C637.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.06","synonyms":[{"name":"Spom972h-gmh5","type":"exact"}],"termid":"PR:P78817"}


id: PBO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3","termid":"PBO:0042193"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: PBO:0080266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 29 pseudogene","termid":"PBO:0080266"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: PBO:0108608
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_detail","termid":"PBO:0108608"}


id: PBO:0036291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane-associated ribosome receptor Mba1 (predicted)","termid":"PBO:0036291"}


id: PBO:0077273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14B","termid":"PBO:0077273"}


id: PBO:0111536
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive amino acid Gene","termid":"PBO:0111536"}


id: PBO:0065180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRORY Y-linked lncRNA","termid":"PBO:0065180"}


id: PBO:0052895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-6","termid":"PBO:0052895"}


id: PBO:0034619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_biological_process","termid":"PBO:0034619"}


id: PBO:0061637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 1","termid":"PBO:0061637"}


id: PBO:0067469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 598, pseudogene","termid":"PBO:0067469"}


id: PBO:0072558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding C","termid":"PBO:0072558"}


id: GO:0042096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-beta T cell receptor activity (obsolete GO:0042096)","synonyms":[{"name":"alpha-beta T cell receptor activity","type":"exact"}],"termid":"GO:0042096"}


id: PATO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001182 relative response (obsolete PATO:0001182)","termid":"PATO:0001182"}


id: PBO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav2","termid":"PBO:0003799"}


id: PBO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb1 (predicted)","termid":"PBO:0036512"}


id: GO:1900544
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide metabolic process","termid":"GO:0045981"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"positively_regulates","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of purine metabolic process","type":"narrow"},{"name":"activation of purine metabolism","type":"narrow"},{"name":"activation of purine nucleotide metabolic process","type":"narrow"},{"name":"activation of purine nucleotide metabolism","type":"narrow"},{"name":"positive regulation of purine metabolic process","type":"narrow"},{"name":"positive regulation of purine metabolism","type":"narrow"},{"name":"positive regulation of purine nucleotide metabolism","type":"exact"},{"name":"up regulation of purine metabolic process","type":"narrow"},{"name":"up regulation of purine metabolism","type":"narrow"},{"name":"up regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up regulation of purine nucleotide metabolism","type":"exact"},{"name":"up-regulation of purine metabolic process","type":"narrow"},{"name":"up-regulation of purine metabolism","type":"narrow"},{"name":"up-regulation of purine nucleotide metabolic process","type":"exact"},{"name":"up-regulation of purine nucleotide metabolism","type":"exact"},{"name":"upregulation of purine metabolic process","type":"narrow"},{"name":"upregulation of purine metabolism","type":"narrow"},{"name":"upregulation of purine nucleotide metabolic process","type":"exact"},{"name":"upregulation of purine nucleotide metabolism","type":"exact"}],"termid":"GO:1900544","terms_by_termid":{"GO:1905857":null}}


id: PR:O74351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine desulfurase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11601:SF13","PRO:DNx","OMA:SCHPO03272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine desulfurase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.11c","secondary_identifiers":["UniProtKB:O74351"],"synonyms":[{"name":"Spom972h-NFS1","type":"exact"}],"termid":"PR:O74351"}


id: PBO:0085952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is resistant to 2-deoxy-D-glucose and displays abnormally elongated buds; DGR2 has a paralog, YMR102C, that arose from the whole genome duplication","termid":"PBO:0085952"}


id: GO:0016512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of endothelin 1 by cleavage of the Trp21-Val22 bond in the precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme 1 activity (obsolete GO:0016512)","synonyms":[{"name":"ECE-1 activity","type":"related"},{"name":"endothelin-converting enzyme 1 activity","type":"exact"}],"termid":"GO:0016512"}


id: SO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature fusion where the deletion brings together regulatory regions.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_fusion","termid":"SO:0001882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_fusion","synonyms":[{"name":"regulatory region fusion","type":"exact"}],"termid":"SO:0001887"}


id: PBO:0087042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L1B; N-terminally acetylated; homologous to mammalian ribosomal protein L10A and bacterial L1; RPL1B has a paralog, RPL1A, that arose from the whole genome duplication; rpl1a rpl1b double null mutation is lethal; ribosomes containing Rpl1b are more efficient in translation of respiration-related proteins","termid":"PBO:0087042"}


id: PBO:0084134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity, broad selectivity, nucleoside/nucleobase transporter; vacuolar membrane localized transporter which may regulate the balance of nicotinamide riboside (NmR) levels between the cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis; equilibrative nucleoside transporter (ENT) family member","termid":"PBO:0084134"}


id: GO:1901137
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id: GO:0045261
data:
  {"annotated_genes":["SJAG_00438","SJAG_03114","SJAG_00915","SJAG_02564","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88919,99078,101031,104807],"is_not":false,"summary":null,"term":"GO:0045261"},{"annotations":[85230],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045267"}]},"cv_name":"cellular_component","definition":"The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex","termid":"GO:0045259"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex, catalytic core F(1)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"exact"}],"termid":"GO:0045261","terms_by_termid":{"GO:0045261":null,"GO:0045267":null}}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: GO:0061102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroendocrine cell of the stomach epithelium.","definition_xrefs":["PMID:18173746","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"stomach development","termid":"GO:0062094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach neuroendocrine cell differentiation","synonyms":[{"name":"gastric neuroendocrine cell differentiation","type":"related"}],"termid":"GO:0061102"}


id: PBO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 23","termid":"PBO:0071725"}


id: PBO:0065242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 15","termid":"PBO:0065242"}


id: GO:0099141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to protozoan","termid":"GO:0099141"}


id: GO:0060656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching of the mammary gland cord as a result of a signal being created by a mammary fat precursor cell and its subsequent reception and interpretation by a mammary cord epithelial cell.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"regulation of branching involved in mammary gland duct morphogenesis","termid":"GO:0060762"},{"relation_name":"regulates","term_name":"branching involved in mammary gland cord morphogenesis","termid":"GO:0060655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of branching involved in mammary cord morphogenesis by fat precursor cell-epithelial cell signaling","synonyms":[{"name":"regulation of branching involved in mammary cord morphogenesis by fat precursor cell-epithelial cell signalling","type":"exact"}],"termid":"GO:0060656"}


id: GO:1905262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["GOC:TermGenie","PMID:26653857","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of meiotic DNA double-strand break formation","termid":"GO:1903342"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0140013","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"negative regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","synonyms":[{"name":"down regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"down-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"downregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"inhibition of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"}],"termid":"GO:1905262"}


id: PBO:0046931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member E","termid":"PBO:0046931"}


id: GO:1904765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a maltose stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:24224056"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to maltose (obsolete GO:1904765)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in cellular response to maltose stimulus","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"}],"termid":"GO:1904765"}


id: PBO:0046991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member B","termid":"PBO:0046991"}


id: PATO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of temperature which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variant temperature","termid":"PATO:0001314"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased variability of temperature","synonyms":[{"name":"low variability of temperature","type":"exact"}],"termid":"PATO:0001307"}


id: GO:0008017
data:
  {"annotated_genes":["SJAG_01613","SJAG_02040","SJAG_01546","SJAG_01760","SJAG_00332","SJAG_02384","SJAG_04841","SJAG_00723","SJAG_02848","SJAG_02609","SJAG_02656","SJAG_03540","SJAG_02814","SJAG_02045","SJAG_00042","SJAG_00851","SJAG_00773","SJAG_01297","SJAG_04745","SJAG_02795","SJAG_00930","SJAG_03835","SJAG_02624","SJAG_03073","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58607,59074,60857,61737,63409,63423,65661,67501,68100,72769,73053,74977,75343,75370,75658,75720,76029,77623,78603],"is_not":false,"summary":null,"term":"GO:0008017"},{"annotations":[70738,70188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051011"},{"annotations":[78757,64776,67633,69542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051010"}]},"cv_name":"molecular_function","definition":"Binding to a microtubule, a filament composed of tubulin monomers.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tubulin binding","termid":"GO:0015631"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01760":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02795":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0008092","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"microtubule binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9614343"],"synonyms":[{"name":"microtubule severing activity","type":"related"},{"name":"microtubule/chromatin interaction","type":"related"}],"termid":"GO:0008017","terms_by_termid":{"GO:0008017":null,"GO:0051010":null,"GO:0051011":null}}


id: PBO:0029392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029392"}


id: PBO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein Hgh1","termid":"PBO:0017819"}


id: PBO:0071260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 5","termid":"PBO:0071260"}


id: PBO:0083275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene DST1","termid":"PBO:0083275"}


id: GO:1902216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["PMID:17210636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"positively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"activation of IL-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902216"}


id: PBO:0077430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167A pseudogene 1","termid":"PBO:0077430"}


id: PBO:0090452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent chromatin remodeller Mit1","termid":"PBO:0090452"}


id: PBO:0108526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR54 ortholog, implicated in vesicle-mediated transport","termid":"PBO:0108526"}


id: PATO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved","synonyms":[{"name":"bowing","type":"narrow"},{"name":"curled","type":"related"}],"termid":"PATO:0000406"}


id: PBO:0088884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family","termid":"PBO:0088884"}


id: GO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-guanidino-2-oxopentanoate + H+ = 4-guanidinobutanal + CO2.","definition_xrefs":["RHEA:11340","EC:4.1.1.75"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"5-guanidino-2-oxopentanoate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03178","MetaCyc:4.1.1.75-RXN"],"synonyms":[{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase (4-guanidinobutanal-forming)","type":"related"},{"name":"2-oxo-5-guanidinopentanoate carboxy-lyase activity","type":"related"},{"name":"2-oxo-5-guanidinopentanoate decarboxylase activity","type":"related"},{"name":"2-oxo-5-guanidinovalerate alpha-ketoarginine decarboxylase activity","type":"related"},{"name":"alpha-ketoarginine decarboxylase activity","type":"related"}],"termid":"GO:0047435"}


id: PBO:0064836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 2","termid":"PBO:0064836"}


id: GO:0102422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiotrioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiotrioside 1,6-glucosyltransferase activity (obsolete GO:0102422)","termid":"GO:0102422"}


id: GO:0045022
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73711],"is_not":false,"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs.","definition_xrefs":["ISBN:0815316194","PMID:29980602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport between endosomal compartments","termid":"GO:0098927"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"early endosome to late endosome transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endosome maturation","type":"related"}],"termid":"GO:0045022","terms_by_termid":{"GO:0045022":null}}


id: GO:0002098
data:
  {"annotated_genes":["SJAG_03677","SJAG_00235","SJAG_04113","SJAG_00579","SJAG_00186","SJAG_04175","SJAG_03932","SJAG_02302","SJAG_01302","SJAG_04704","SJAG_01024","SJAG_03896","SJAG_03616","SJAG_04756","SJAG_04367","SJAG_00358","SJAG_05023","SJAG_01418","SJAG_04452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83910,92123,101585,114630],"is_not":false,"summary":null,"term":"GO:0002098"},{"annotations":[90335,112969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[104497,88867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[91532,114759,96622,106176,105511,109998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002926"},{"annotations":[102902,92057,101882,104432,113200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble base modification","termid":"GO:0002097"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00235":null,"SJAG_00358":null,"SJAG_00579":null,"SJAG_01024":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_02302":null,"SJAG_03616":null,"SJAG_03677":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null,"SJAG_04175":null,"SJAG_04367":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null,"SJAG_05023":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002098","terms_by_termid":{"GO:0002098":null,"GO:0002143":null,"GO:0002926":null,"GO:0070899":null,"GO:1990799":null}}


id: PBO:0047404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 42","termid":"PBO:0047404"}


id: GO:0075302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi Basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of basidiospore formation","termid":"GO:0075302"}


id: PBO:0055918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A6, pseudogene","termid":"PBO:0055918"}


id: SO:0001291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4,2'-O-dimethylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_2_prime_O_dimethylcytidine","secondary_identifiers":["RNAMOD:083"],"synonyms":[{"name":"N4 2 prime O dimethylcytidine","type":"exact"},{"name":"N4,2'-O-dimethylcytidine","type":"exact"},{"name":"m4Cm","type":"exact"}],"termid":"SO:0001291"}


id: GO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to selenite ion","termid":"GO:0072714"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to selenite ion","termid":"GO:0072715"}


id: PBO:0005895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine, mitochondrial","termid":"PBO:0005895"}


id: PBO:0043498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 5","termid":"PBO:0043498"}


id: GO:0075026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of appressorium initiation (obsolete GO:0075026)","synonyms":[{"name":"regulation of appressorium initiation on or near host","type":"related"},{"name":"regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075026"}


id: PBO:0086658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some similarity to sialidase from Trypanosoma; YMR317W is not an essential gene","termid":"PBO:0086658"}


id: PBO:0029644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_fragmented_nucleus_and_increased_septum_thickness","termid":"PBO:0029644"}


id: PBO:0111813
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0111813"}


id: PBO:0013770
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of loss of CAMP-dependent protein Kinase","termid":"PBO:0013770"}


id: FYPO:0007878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PomBase:mah","PMID:34608864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"decreased protein degradation during cellular response to MMS","type":"exact"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"reduced protein degradation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0007878"}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: GO:0015337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(out) + H+(out) = Me2+(in) + H+(in). Me can be Mn2+ or Cu2+.","definition_xrefs":["TC:2.A.55.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete low affinity metal ion uptake transporter activity (obsolete GO:0015337)","synonyms":[{"name":"low affinity metal ion uptake transporter activity","type":"exact"}],"termid":"GO:0015337"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["RHEA:15065","EC:3.5.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: PBO:0055273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2700","termid":"PBO:0055273"}


id: GO:0039540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of RIG-1 (also known as DDX58). The cytoplasmic pattern recognition RIG-I recognizes viral RNA synthesized during active viral replication and signals to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.","definition_xrefs":["PMID:26138103","PMID:19454348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity","secondary_identifiers":["VZ:856","GO:0039538"],"synonyms":[{"name":"inhibition by virus of host DDX58 activity","type":"related"},{"name":"inhibition by virus of host RIG-I","type":"related"},{"name":"inhibition by virus of host RIG-I signaling","type":"related"},{"name":"inhibition of host DDX58/RIG-I by virus","type":"exact"},{"name":"suppression by virus of host DDX58 signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I activity","type":"related"},{"name":"suppression by virus of host RIG-I signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I signalling pathway","type":"exact"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity","type":"narrow"},{"name":"symbiont-mediated suppression of host RIG-I signaling pathway","type":"related"}],"termid":"GO:0039540"}


id: PBO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_microtubule_end_during_mitotic_interphase","termid":"PBO:0035873"}


id: FYPO:0003740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) occurs to a lower extent than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased CENP-A containing chromatin assembly","synonyms":[{"name":"decreased CENP-A containing nucleosome assembly","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"decreased CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"decreased CENP-A deposition","type":"related"},{"name":"decreased CENP-A loading","type":"related"},{"name":"decreased CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"decreased DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"decreased centromere-specific histone exchange","type":"exact"},{"name":"decreased centromere-specific nucleosome assembly","type":"exact"},{"name":"decreased centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"reduced CENP-A containing nucleosome assembly","type":"exact"}],"termid":"FYPO:0003740"}


id: PBO:0076575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 3","termid":"PBO:0076575"}


id: PBO:0072296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 14","termid":"PBO:0072296"}


id: PBO:0075806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA binding exonuclease protection factor La like 5, pseudogene","termid":"PBO:0075806"}


id: GO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}


id: PR:O74549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A NEDD8-conjugating enzyme Ubc12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04749","PANTHER:PTHR24067:SF17","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme ubc12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.10c","secondary_identifiers":["UniProtKB:O74549"],"synonyms":[{"name":"RUB1-conjugating enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RUB1-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBE2M","type":"exact"},{"name":"ubiquitin carrier protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74549"}


id: PBO:0055161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2580","termid":"PBO:0055161"}


id: PBO:0050001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIRA interacting protein 3","termid":"PBO:0050001"}


id: FYECO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Calcium ions were completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium absent","termid":"FYECO:0000150"}


id: PBO:0045559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 5","termid":"PBO:0045559"}


id: GO:0042465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a cell or organism in response to a stimulus in which the rate of movement depends on the intensity (rather than the direction) of the stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kinesis","secondary_identifiers":["Wikipedia:Kinesis"],"termid":"GO:0042465"}


id: GO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine + pyruvate = L-alanine + pyridoxal.","definition_xrefs":["RHEA:12841","EC:2.6.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"pyridoxamine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.30-RXN","KEGG_REACTION:R01712"],"synonyms":[{"name":"pyridoxamine--pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamine-pyruvate aminotransferase activity","type":"exact"},{"name":"pyridoxamine-pyruvic transaminase","type":"broad"},{"name":"pyridoxamine:pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamineu-pyruvic transaminase activity","type":"related"}],"termid":"GO:0047300"}


id: PBO:0058059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4280","termid":"PBO:0058059"}


id: PBO:0028616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U2_snRNP_binding","termid":"PBO:0028616"}


id: GO:1900639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of asperfuranone biosynthetic process","synonyms":[{"name":"activation of asperfuranone anabolism","type":"exact"},{"name":"activation of asperfuranone biosynthesis","type":"exact"},{"name":"activation of asperfuranone biosynthetic process","type":"narrow"},{"name":"activation of asperfuranone formation","type":"exact"},{"name":"activation of asperfuranone synthesis","type":"exact"},{"name":"positive regulation of asperfuranone anabolism","type":"exact"},{"name":"positive regulation of asperfuranone biosynthesis","type":"exact"},{"name":"positive regulation of asperfuranone formation","type":"exact"},{"name":"positive regulation of asperfuranone synthesis","type":"exact"},{"name":"up regulation of asperfuranone anabolism","type":"exact"},{"name":"up regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up regulation of asperfuranone formation","type":"exact"},{"name":"up regulation of asperfuranone synthesis","type":"exact"},{"name":"up-regulation of asperfuranone anabolism","type":"exact"},{"name":"up-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"up-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"up-regulation of asperfuranone formation","type":"exact"},{"name":"up-regulation of asperfuranone synthesis","type":"exact"},{"name":"upregulation of asperfuranone anabolism","type":"exact"},{"name":"upregulation of asperfuranone biosynthesis","type":"exact"},{"name":"upregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"upregulation of asperfuranone formation","type":"exact"},{"name":"upregulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900639"}


id: PR:Q9HFE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein P16F5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.06","synonyms":[{"name":"Spom972h-nop8","type":"exact"}],"termid":"PR:Q9HFE6"}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106273],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.13","RHEA:17453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73814","KEGG_REACTION:R04144","MetaCyc:GLYRIBONUCSYN-RXN"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: GO:0031121
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins at the midpoint of a cell.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"equatorial microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organisation","type":"exact"},{"name":"equatorial microtubule organization and biogenesis","type":"related"}],"termid":"GO:0031121","terms_by_termid":{"GO:0031025":null}}


id: PBO:0059566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1I, pseudogene","termid":"PBO:0059566"}


id: GO:0140076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipoprotein transport.","definition_xrefs":["GOC:BHF","PMID:26501192","GOC:RPH","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"negatively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of lipoprotein transport","termid":"GO:0140076"}


id: PBO:0091124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa1","termid":"PBO:0091124"}


id: PBO:0072176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 3","termid":"PBO:0072176"}


id: PBO:0060074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 21","termid":"PBO:0060074"}


id: PBO:0089112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule severing ATPase Spg4","termid":"PBO:0089112"}


id: PBO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Fsv1","termid":"PBO:0000900"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PBO:0051510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of nuclear factor kappa B kinase subunit gamma pseudogene 1","termid":"PBO:0051510"}


id: FYPO:0006846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased total protein level during vegetative growth","synonyms":[{"name":"decreased total protein accumulation during vegetative growth","type":"related"},{"name":"decreased total protein content during vegetative growth","type":"exact"},{"name":"decreased total protein level during mitotic cell cycle","type":"related"},{"name":"reduced total protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0006846"}


id: PBO:0069621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 898, pseudogene","termid":"PBO:0069621"}


id: GO:0004341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucono-1,5-lactone + H2O = D-gluconate.","definition_xrefs":["EC:3.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"gluconolactonase activity","secondary_identifiers":["MetaCyc:GLUCONOLACT-RXN","RHEA:10440"],"synonyms":[{"name":"D-glucono-1,5-lactone lactonohydrolase activity","type":"related"},{"name":"aldonolactonase activity","type":"related"},{"name":"glucono-delta-lactonase activity","type":"related"},{"name":"gulonolactonase activity","type":"related"},{"name":"lactonase activity","type":"broad"}],"termid":"GO:0004341"}


id: GO:0140302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the male gametophyte (pollen/pollen tube) and the stylar tissues of the female sporophyte.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-style interaction","termid":"GO:0140302"}


id: GO:0032536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the size of a cell projection.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection size","termid":"GO:0032536"}


id: PBO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa1 (predicted)","termid":"PBO:0001477"}


id: SO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a peptide that is able to excise itself and rejoin the remaining portions with a peptide bond.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"intein","secondary_identifiers":["http://en.wikipedia.org/wiki/Intein"],"synonyms":[{"name":"protein intron","type":"related"}],"termid":"SO:0000728"}


id: PBO:0088404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNP complex","termid":"PBO:0088404"}


id: PBO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (predicted)","termid":"PBO:0000411"}


id: GO:0047681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic alcohol + NADP+ = an aromatic aldehyde + NADPH.","definition_xrefs":["MetaCyc:ARYL-ALCOHOL-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aryl-alcohol dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:17761"],"synonyms":[{"name":"NADPH-linked benzaldehyde reductase activity","type":"related"},{"name":"aryl alcohol dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"aryl-alcohol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047681"}


id: PATO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines or grooves, usually parallel.","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striated","termid":"PATO:0001410"}


id: PBO:0058924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7c","termid":"PBO:0058924"}


id: GO:2000361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of prostaglandin-E synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isomerase activity","termid":"GO:0010911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of prostaglandin-E synthase activity","synonyms":[{"name":"regulation of (5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"exact"},{"name":"regulation of PGE isomerase activity","type":"exact"},{"name":"regulation of PGE2 isomerase activity","type":"exact"},{"name":"regulation of PGH-PGE isomerase activity","type":"exact"},{"name":"regulation of Prostaglandin-H(2) E-isomerase activity","type":"exact"},{"name":"regulation of endoperoxide isomerase activity","type":"exact"},{"name":"regulation of prostaglandin H-E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin R-prostaglandin E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E isomerase activity","type":"exact"},{"name":"regulation of prostaglandin endoperoxide E2 isomerase activity","type":"exact"},{"name":"regulation of prostaglandin-H2 E-isomerase activity","type":"exact"}],"termid":"GO:2000361"}


id: GO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of systemic acquired resistance in symbiont (obsolete GO:0052351)","synonyms":[{"name":"activation by organism of SAR in symbiont","type":"exact"},{"name":"activation by organism of systemic acquired resistance in symbiont","type":"exact"},{"name":"induction by organism of SAR in symbiont","type":"exact"},{"name":"induction by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052351"}


id: FYPO:0004503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein having high molecular mass due to polyubiquitin conjugation is greater than normal.","definition_xrefs":["PMID:16149916","PomBase:mah","PMID:8247131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular HMW ubiquitin conjugate level","synonyms":[{"name":"accumulation of HMW ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular mass ubiquitin conjugates","type":"exact"},{"name":"accumulation of high molecular weight ubiquitin conjugates","type":"exact"},{"name":"increased HMW ubiquitin conjugate accumulation","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during mitotic cell cycle","type":"related"},{"name":"increased cellular HMW ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular mass ubiquitin conjugate level during vegetative growth","type":"exact"},{"name":"increased cellular high molecular weight ubiquitin conjugate level during vegetative growth","type":"exact"}],"termid":"FYPO:0004503"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: GO:0060354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"negatively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion molecule production","termid":"GO:0060354"}


id: PR:O42998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A HEAT repeat-containing protein 5B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pof6 interactor protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.08","secondary_identifiers":["UniProtKB:O42998"],"synonyms":[{"name":"Spom972h-HEATR5B","type":"exact"}],"termid":"PR:O42998"}


id: PBO:0080675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 2","termid":"PBO:0080675"}


id: PR:Q9USH8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucosidase 2 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04545","PANTHER:PTHR12630:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.02","secondary_identifiers":["UniProtKB:Q9USH8"],"synonyms":[{"name":"Spom972h-PRKCSH","type":"exact"},{"name":"alpha-glucosidase 2 subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USH8"}


id: GO:0004582
data:
  {"annotated_genes":["SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92490],"is_not":false,"summary":null,"term":"GO:0004582"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate.","definition_xrefs":["EC:2.4.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02903":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate beta-D-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4719354","RHEA:21184","MetaCyc:2.4.1.83-RXN","Reactome:R-HSA-4719375","Reactome:R-HSA-4717406","Reactome:R-HSA-162721"],"synonyms":[{"name":"DPM synthase activity","type":"exact"},{"name":"GDP-mannose-dolichol phosphate mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:dolichyl-phosphate beta-D-mannosyltransferase activity","type":"related"},{"name":"GDPMan:DolP mannosyltransferase activity","type":"related"},{"name":"GDPmannose-dolichylmonophosphate mannosyltransferase activity","type":"related"},{"name":"GDPmannose:dolichyl-phosphate mannosyltransferase activity","type":"related"},{"name":"dolichol phosphate mannose synthase activity","type":"related"},{"name":"dolichol-phosphate mannose synthase activity","type":"related"},{"name":"dolichol-phosphate mannosyltransferase activity","type":"related"},{"name":"dolichol-phosphate-mannose synthase activity","type":"exact"},{"name":"dolichyl mannosyl phosphate synthase activity","type":"related"},{"name":"dolichyl phosphate mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate mannose synthase activity","type":"related"},{"name":"dolichyl-phospho-mannose synthase activity","type":"related"},{"name":"guanosine diphosphomannose-dolichol phosphate mannosyltransferase activity","type":"related"},{"name":"mannosylphosphodolichol synthase activity","type":"related"},{"name":"mannosylphosphoryldolichol synthase activity","type":"related"}],"termid":"GO:0004582","terms_by_termid":{"GO:0004582":null}}


id: PATO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000065 relative percentage (obsolete PATO:0000065)","termid":"PATO:0000065"}


id: PBO:0044830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 117 (pseudogene)","termid":"PBO:0044830"}


id: PBO:0056461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 1","termid":"PBO:0056461"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: PBO:0086937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles","termid":"PBO:0086937"}


id: GO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which paired chromosomes are physically detached from each other during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"},{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"male meiosis chromosome separation","synonyms":[{"name":"chromosome separation during male meiosis","type":"exact"},{"name":"male meiosis chromosome resolution","type":"exact"}],"termid":"GO:0051308"}


id: PBO:0028812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity","termid":"PBO:0028812"}


id: PBO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc4","termid":"PBO:0001603"}


id: PBO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_osmolarity","termid":"PBO:0031349"}


id: GO:0180020
data:
  {"annotated_genes":["SJAG_02177","SJAG_03795","SJAG_03010","SJAG_05289","SJAG_01848","SJAG_04644"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104586,104663,110895,112209,114487,114575],"is_not":false,"summary":null,"term":"GO:0180020"}]},"cv_name":"molecular_function","definition":"The activity of bending or deforming a membrane. This activity can occur by multiple mechanisms including the insertion amphipathic domains into one or both leaflets.","definition_xrefs":["PMID:19780639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_02177":null,"SJAG_03010":null,"SJAG_03795":null,"SJAG_04644":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane bending activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane curving","type":"related"}],"termid":"GO:0180020","terms_by_termid":{"GO:0180020":null}}


id: PBO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional copper sensing transcription factor Cuf1","termid":"PBO:0000335"}


id: PBO:0030643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase_during_stationary_phase","termid":"PBO:0030643"}


id: GO:0140014
data:
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id: GO:0106373
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id: PBO:0086647
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id: PBO:0052821
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id: FYPO:0000266
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id: GO:0005527
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id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: GO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase I of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase I","termid":"GO:0007134"}


id: PBO:0017997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transmembrane transporter Str1","termid":"PBO:0017997"}


id: PBO:0017862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous iron/manganese transmembrane transporter Pcl1","termid":"PBO:0017862"}


id: PBO:0040414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit b","termid":"PBO:0040414"}


id: PBO:0083555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM8; identified by fungal homology and RT-PCR","termid":"PBO:0083555"}


id: PBO:0078942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 9-1","termid":"PBO:0078942"}


id: GO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gq/11 subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gq/11 subunit subsequently activates phospholipase C and results in an increase in inositol triphosphate (IP3) levels.","definition_xrefs":["PMID:18703043","PMID:18571247","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gq/11-coupled serotonin receptor activity","synonyms":[{"name":"5-HT2 receptor activity","type":"broad"},{"name":"serotonin receptor activity, coupled via Gq/11","type":"exact"}],"termid":"GO:0001587"}


id: PBO:0088804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and ascospore endo-1,3-beta-glucanase Eng2","termid":"PBO:0088804"}


id: GO:0038030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a Wnt protein binding to a frizzled family receptor on the surface of a target cell, where the signal is passed on via the MAPKKK cascade.","definition_xrefs":["PMID:17720811","GOC:BHF","GOC:vk","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete non-canonical Wnt signaling pathway via MAPK cascade (obsolete GO:0038030)","synonyms":[{"name":"non-canonical Wnt receptor signaling pathway via MAPK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPK signaling","type":"exact"},{"name":"non-canonical Wnt receptor signaling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt receptor signalling pathway via MAPKKK cascade","type":"exact"},{"name":"non-canonical Wnt-activated signaling pathway via MAPK cascade","type":"exact"}],"termid":"GO:0038030"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: PBO:0026693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caesium","termid":"PBO:0026693"}


id: PATO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's exhibiting a layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stratification","termid":"PATO:0002067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratified","termid":"PATO:0002068"}


id: PBO:0089857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K36 methyltransferase Set2","termid":"PBO:0089857"}


id: GO:0008803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-adenosyl) tetraphosphate + H2O = 2 ADP + 2 H+.","definition_xrefs":["EC:3.6.1.41","RHEA:24252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity","secondary_identifiers":["KEGG_REACTION:R00125","MetaCyc:3.6.1.41-RXN"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"adenosine tetraphosphate phosphodiesterase activity","type":"related"},{"name":"bis(5'-adenosyl) tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine polyphosphate hydrolase activity","type":"related"},{"name":"diadenosine tetraphosphatase (symmetrical)","type":"narrow"},{"name":"diadenosine tetraphosphate hydrolase activity","type":"related"},{"name":"diadenosinetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphate (symmetrical)","type":"related"},{"name":"symmetrical diadenosine tetraphosphate hydrolase activity","type":"related"}],"termid":"GO:0008803"}


id: PBO:0034528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_meiotic_cell_cycle","termid":"PBO:0034528"}


id: FYPO:0000634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to centromere during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abolished protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"protein absent from centromere during vegetative growth","type":"related"},{"name":"protein localization to centromere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000634"}


id: PBO:0082575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention","termid":"PBO:0082575"}


id: GO:1904172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:25651887","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"positively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bleb assembly","synonyms":[{"name":"activation of bleb assembly","type":"narrow"},{"name":"activation of cell blebbing","type":"narrow"},{"name":"positive regulation of cell blebbing","type":"exact"},{"name":"up regulation of bleb assembly","type":"exact"},{"name":"up regulation of cell blebbing","type":"exact"},{"name":"up-regulation of bleb assembly","type":"exact"},{"name":"up-regulation of cell blebbing","type":"exact"},{"name":"upregulation of bleb assembly","type":"exact"},{"name":"upregulation of cell blebbing","type":"exact"}],"termid":"GO:1904172"}


id: GO:1901794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY0-1277","UniPathway:UPA00835","GOC:yaf","PMID:10537203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"3-(3-hydroxyphenyl)propanoate metabolic process","termid":"GO:1901793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate catabolic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate breakdown","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate catabolism","type":"exact"},{"name":"3-(3-hydroxyphenyl)propanoate degradation","type":"exact"}],"termid":"GO:1901794"}


id: FYPO:0001475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"fragmented mitotic spindle pole body","synonyms":[{"name":"fragmented mitotic SPB","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"exact"},{"name":"fragmented spindle pole body during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0001475"}


id: PBO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARS1 divergent transcript","termid":"PBO:0048387"}


id: FYPO:0005494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the transport of proteins along microtubules is decreased. Transport of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein transport during vegetative growth","termid":"FYPO:0000541"},{"relation_name":"is_a","term_name":"decreased transport along microtubule during vegetative growth","termid":"FYPO:0005526"},{"relation_name":"is_a","term_name":"abnormal protein transport along microtubule during vegetative growth","termid":"FYPO:0005830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein transport along microtubule during vegetative growth","synonyms":[{"name":"decreased protein movement along microtubule during vegetative growth","type":"exact"},{"name":"decreased protein transport along microtubule during mitotic cell cycle","type":"related"},{"name":"reduced protein transport along microtubule during vegetative growth","type":"exact"}],"termid":"FYPO:0005494"}


id: PBO:0030254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level_during_vegetative_growth","termid":"PBO:0030254"}


id: GO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cluster of several metal atoms, including manganese or calcium, with one or more bridging (mu-bond) oxygen atoms; amino acids residues in proteins that may ligate the metal oxygen cluster are histidine, aspartate, and glutamate.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete metal incorporation into metallo-oxygen cluster (obsolete GO:0030923)","termid":"GO:0030923"}


id: PBO:0069498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 765, pseudogene","termid":"PBO:0069498"}


id: PBO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Isp3","termid":"PBO:0016883"}


id: PBO:0011059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"PBO:0011059"}


id: GO:0035115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic forelimb morphogenesis","secondary_identifiers":["GO:0035117"],"synonyms":[{"name":"embryonic arm morphogenesis","type":"narrow"}],"termid":"GO:0035115"}


id: GO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process required for sperm to reach fertilization competence. Sperm undergo an incompletely understood series of morphological and molecular maturational processes, termed capacitation, involving, among other processes, protein tyrosine phosphorylation and increased intracellular calcium.","definition_xrefs":["PMID:11820818","GOC:jid","ISBN:978-3-642-58301-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell maturation","termid":"GO:0048469"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm capacitation","synonyms":[{"name":"sperm activation","type":"related"}],"termid":"GO:0048240"}


id: GO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which purines crystalize in reflective stacks. Iridosomes are synthesized in iridophore cells and are silver, gold or iridescent in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"iridosome","synonyms":[{"name":"reflecting platelet","type":"exact"}],"termid":"GO:0043698"}


id: PBO:0066120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 1","termid":"PBO:0066120"}


id: GO:0071038
data:
  {"annotated_genes":["SJAG_04321","SJAG_01818","SJAG_04824","SJAG_04153","SJAG_00854","SJAG_03745","SJAG_04818","SJAG_03179","SJAG_04006","SJAG_03984","SJAG_01521","SJAG_04084","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88327,89145,91986,93322,98134,100445,101291,102490,103488,109291,111452,111899,114287],"is_not":false,"summary":null,"term":"GO:0071038"}]},"cv_name":"biological_process","definition":"A nuclear tRNA surveillance pathway, dependent on the TRAMP exosome adaptor and the nuclear exosome.","definition_xrefs":["PMID:35901126","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"tRNA surveillance","termid":"GO:0106354"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"TRAMP-dependent tRNA surveillance pathway","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071038","terms_by_termid":{"GO:0071038":null}}


id: GO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A organ system process carried out at the level of a muscle. Muscle tissue is composed of contractile cells or fibers.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle system process","synonyms":[{"name":"muscle physiological process","type":"related"}],"termid":"GO:0003012"}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: PBO:0087988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA; also acts on U2 snRNA; also pseudouridylates some mRNAs, and pseudouridylation level varies with growth phase; nuclear protein that appears to be involved in tRNA export; PUS1 has a paralog, PUS2, that arose from the whole genome duplication","termid":"PBO:0087988"}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: PBO:0082169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants","termid":"PBO:0082169"}


id: GO:0070582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a double-stranded DNA molecule is synthesized from a circular duplex template.","definition_xrefs":["ISBN:0198506732","GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"theta DNA replication","synonyms":[{"name":"theta replication","type":"exact"}],"termid":"GO:0070582"}


id: PBO:0003666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, Rtc6 (predicted)","termid":"PBO:0003666"}


id: FYPO:0006826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4-fluorophenylalanine. Cells stop growing (and may die) at a concentration of 4-fluorophenylalanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 4-fluorophenylalanine","synonyms":[{"name":"hypersensitive to 4-fluorophenylalanine","type":"exact"},{"name":"sensitive to 4-fluorophenylalanine during mitotic cell cycle","type":"related"},{"name":"sensitive to 4-fluorophenylalanine during vegetative growth","type":"exact"},{"name":"sensitive to p-fluoro-phenylalanine","type":"exact"},{"name":"sensitive to p-fluorophenylalanine","type":"exact"}],"termid":"FYPO:0006826"}


id: GO:0032212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomerase","termid":"GO:0032210"},{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance via telomere lengthening","termid":"GO:1904358"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via telomerase","synonyms":[{"name":"activation of telomere maintenance via telomerase","type":"narrow"},{"name":"stimulation of telomere maintenance via telomerase","type":"narrow"},{"name":"up regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"up-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"upregulation of telomere maintenance via telomerase activity","type":"exact"}],"termid":"GO:0032212"}


id: FYPO:0001682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to salt stress","synonyms":[{"name":"normal increase in trehalase activity in response to salt stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to salt stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0001682"}


id: PBO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.15","termid":"PBO:0001972"}


id: PBO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein-specific kinase Dsk1","termid":"PBO:0003355"}


id: PBO:0074600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11","termid":"PBO:0074600"}


id: GO:0090638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that depends on direct conversion of the phosphatidyl-base phosphatidylethanolamine to phosphatidylcholine by successive methylations.","definition_xrefs":["MetaCyc:PWY-6825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphatidylethanolamine","termid":"GO:0090638"}


id: GO:0140758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.","definition_xrefs":["PMID:25628956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deNEDDylase activity","termid":"GO:0019784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"metal-dependent deNEDDylase activity","termid":"GO:0140758"}


id: FYPO:0005995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased lncRNA level","synonyms":[{"name":"increased lncRNA accumulation","type":"related"},{"name":"increased lncRNA level during mitotic cell cycle","type":"related"},{"name":"increased lncRNA level during vegetative growth","type":"exact"},{"name":"increased lncRNA transcript level","type":"broad"},{"name":"increased long non-coding RNA level","type":"exact"},{"name":"increased mature lncRNA level","type":"exact"}],"termid":"FYPO:0005995"}


id: PBO:0003539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Res1","termid":"PBO:0003539"}


id: PBO:0111495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EJC auxiliary factor, pinin ortholog Pnn1","termid":"PBO:0111495"}


id: MOD:00702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms or groups containing isotopes that are not the most common.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope labeled residue","synonyms":[{"name":"IsoTagRes","type":"exact"},{"name":"SILAC","type":"exact"}],"termid":"MOD:00702"}


id: GO:0009578
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of an etioplast but excluding the prothylakoid space. It contains the etioplast DNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast stroma","termid":"GO:0009578"}


id: PR:O13896
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00468","PRO:DNx","PANTHER:PTHR11239:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit RPC10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.05","secondary_identifiers":["UniProtKB:O13896"],"synonyms":[{"name":"DNA-directed RNA polymerases III 12.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3K","type":"exact"}],"termid":"PR:O13896"}


id: PBO:0040883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 7","termid":"PBO:0040883"}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: FYPO:0002868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular orotidine level","synonyms":[{"name":"increased cellular orotidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular orotidine level during vegetative growth","type":"exact"},{"name":"increased orotidine accumulation","type":"related"}],"termid":"FYPO:0002868"}


id: GO:0042816
data:
  {"annotated_genes":["SJAG_00691","SJAG_00707","SJAG_00283","SJAG_05230","SJAG_00252","SJAG_01881","SJAG_01383","SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95074],"is_not":false,"summary":null,"term":"GO:0042816"},{"annotations":[88889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[95738,111700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110407,96923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[91562,63433,83839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[91563,83841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[88890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[96924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["PMID:30037155","GOC:jl","PMID:30671974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"vitamin B6 metabolism","type":"exact"}],"termid":"GO:0042816","terms_by_termid":{"GO:0008614":null,"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0111859
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain","termid":"PBO:0111859"}


id: FYPO:0004604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at subtelomere","termid":"FYPO:0000169"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at subtelomere","secondary_identifiers":["FYPO:0003880"],"synonyms":[{"name":"decreased chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at subtelomere during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at telomere","type":"related"},{"name":"reduced chromatin silencing at subtelomere","type":"exact"}],"termid":"FYPO:0004604"}


id: PBO:0030327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity","termid":"PBO:0030327"}


id: GO:0005778
data:
  {"annotated_genes":["SJAG_03781","SJAG_03715","SJAG_01854","SJAG_02997","SJAG_00702","SJAG_00947","SJAG_01165","SJAG_01685","SJAG_03440","SJAG_02619","SJAG_00891","SJAG_03324","SJAG_04315","SJAG_04763","SJAG_02693","SJAG_03493","SJAG_00974","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62850,84324,86318,86513,91493,93021,97354,99135,101266,102708,107258,107411,107871,110911,111764,113258,113308,114154],"is_not":false,"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a peroxisome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody membrane","termid":"GO:0031903"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_00974":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_01854":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"peroxisomal membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"peroxisome membrane","type":"exact"}],"termid":"GO:0005778","terms_by_termid":{"GO:0005778":null}}


id: GO:0160165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of CD8-positive alpha-beta T cells such that the total number of CD8-positive alpha-beta T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:30650357","PMID:33815406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell homeostasis","synonyms":[{"name":"CD8+ T cell homeostasis","type":"broad"},{"name":"CD8-positive T cell homeostasis","type":"broad"}],"termid":"GO:0160165"}


id: GO:0006082
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id: PBO:0042272
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id: PBO:0089436
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id: PBO:0060529
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id: GO:0033543
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id: GO:1904824
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id: PBO:0079751
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id: PBO:0056022
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id: GO:1900622
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id: GO:0002336
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id: PBO:0053514
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id: SO:0001409
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id: GO:0003816
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id: PBO:0077165
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id: PBO:0052186
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id: PBO:0040027
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id: GO:0032566
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id: GO:0009732
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id: FYPO:0006221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:26132084","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to cell division site, with protein mislocalised to cytoplasm","type":"exact"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site, with protein mislocalized to cytoplasm","type":"related"},{"name":"reduced protein localization to cell division site, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0006221"}


id: PBO:0066795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 94","termid":"PBO:0066795"}


id: GO:0033380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the protease granzyme B is transported to, or maintained in, a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease localization to T cell secretory granule","termid":"GO:0033375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"granzyme B localization to T cell secretory granule","synonyms":[{"name":"granzyme B localisation in T cell secretory granule","type":"exact"},{"name":"granzyme B localization in T cell secretory granule","type":"exact"},{"name":"granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033380"}


id: PBO:0043851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3d receptor 2","termid":"PBO:0043851"}


id: PBO:0086370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl alcohol dehydrogenase; localizes to cytosol; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance","termid":"PBO:0086370"}


id: GO:0000707
data:
  {"annotated_genes":["SJAG_02708","SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92983],"is_not":false,"summary":null,"term":"GO:0000707"},{"annotations":[103692,106321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"During meiosis, the aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA.","definition_xrefs":["GOC:elh","PMID:11459983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombinase assembly","termid":"GO:0000730"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_02708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0065003","GO:0006310","GO:0008150","GO:0044085","GO:0007049","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000707","terms_by_termid":{"GO:0000707":null,"GO:0010772":null}}


id: PBO:0043813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 4","termid":"PBO:0043813"}


id: GO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a NAD(P)+ to NAD(P)H.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with NAD(P)+ as acceptor","secondary_identifiers":["EC:1.20.1.-"],"termid":"GO:0050499"}


id: PBO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interaction motif","termid":"PBO:0001117"}


id: GO:0016674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or a related compound, oxygen, NAD, NADP, an iron-sulfur protein, disulfide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on sulfur group of donors, other acceptors (obsolete GO:0016674)","synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on sulphur group of donors, other acceptors","type":"exact"}],"termid":"GO:0016674"}


id: GO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Malpighian tubule over time, from its formation to the mature structure. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","FBbt:00005786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule development","termid":"GO:0072002"}


id: PBO:0064214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 1","termid":"PBO:0064214"}


id: PBO:0072305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 2","termid":"PBO:0072305"}


id: _global:has_pathogen
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"host_of","termid":"_global:host_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_pathogen","secondary_identifiers":["RO:0002557"],"termid":"_global:has_pathogen"}


id: PBO:0059258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L23","termid":"PBO:0059258"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:25775534","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"ascaroside metabolic process","termid":"GO:1904069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: GO:1900180
data:
  {"annotated_genes":["SJAG_01084","SJAG_02592","SJAG_03453","SJAG_03048","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[110483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[86935,90442,98436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to nucleus","type":"exact"},{"name":"regulation of protein localization in cell nucleus","type":"exact"},{"name":"regulation of protein localization in nucleus","type":"exact"}],"termid":"GO:1900180","terms_by_termid":{"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: GO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a virus that results in the death of a cell in the host organism.","definition_xrefs":["GOC:jl","GOC:bf","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete killing by virus of host cell (obsolete GO:0039633)","synonyms":[{"name":"killing by phage of host cells","type":"narrow"},{"name":"killing by virus of host cells","type":"exact"}],"termid":"GO:0039633"}


id: PBO:0082937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic chaperone of the Hsp90 family; plays a role in determining prion variants; redundant in function and nearly identical with Hsp82p, and together they are essential; expressed constitutively at 10-fold higher basal levels than HSP82 and induced 2-3 fold by heat shock; contains two acid-rich unstructured regions that promote the solubility of chaperone-substrate complexes; HSC82 has a paralog, HSP82, that arose from the whole genome duplication","termid":"PBO:0082937"}


id: GO:1904242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"regulation of pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1904242"}


id: GO:0010429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/unspecified trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"methyl-CpNpN binding","termid":"GO:0010429"}


id: _global:similar_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_to","termid":"_global:similar_to"}


id: PBO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Spt4","termid":"PBO:0004683"}


id: PBO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA complementary to adh1, major transcript","termid":"PBO:0014614"}


id: PBO:0079721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin domain containing 1","termid":"PBO:0079721"}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: GO:1903860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendrite extension.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:24898855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"negatively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite extension","synonyms":[{"name":"down regulation of dendrite extension","type":"exact"},{"name":"down-regulation of dendrite extension","type":"exact"},{"name":"downregulation of dendrite extension","type":"exact"},{"name":"inhibition of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite retraction","type":"exact"},{"name":"up-regulation of dendrite retraction","type":"exact"}],"termid":"GO:1903860"}


id: GO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-sorbose, the L-enantiomer of the ketohexose xylo-2-hexulose.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-sorbose metabolic process","termid":"GO:0019312"},{"relation_name":"is_a","term_name":"sorbose catabolic process","termid":"GO:0042848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-sorbose catabolic process","synonyms":[{"name":"L-sorbose breakdown","type":"exact"},{"name":"L-sorbose catabolism","type":"exact"},{"name":"L-sorbose degradation","type":"exact"}],"termid":"GO:0042850"}


id: PBO:0077793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase I binding, arginine and serine rich like, pseudogene","termid":"PBO:0077793"}


id: FYPO:0001791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body duplication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body duplication","synonyms":[{"name":"abnormal mitotic SPB duplication","type":"exact"},{"name":"abnormal mitotic spindle pole body duplication during vegetative growth","type":"exact"},{"name":"abnormal spindle pole body duplication during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001791"}


id: PBO:0091696
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.825012G>A","termid":"PBO:0091696"}


id: PR:G2TRS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.17","synonyms":[{"name":"Spom972h-SPBP35G2.17","type":"exact"}],"termid":"PR:G2TRS6"}


id: PBO:0083826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; poly (A) mRNA binding subunit which recruits mRNA to the complex; the Pan2p-Pan3p complex controls poly(A) tail length and regulates the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0083826"}


id: GO:0034765
data:
  {"annotated_genes":["SJAG_04551","SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109381,87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion membrane transport","type":"exact"},{"name":"regulation of ion transmembrane transport","type":"broad"},{"name":"regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034765","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0001851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3b product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"complement component C3b binding","termid":"GO:0001851"}


id: GO:0018570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: p-cumate + NADH + H+ + O2 = NAD+ + cis-2,3-dihydroxy-2,3-dihydro-p-cumate.","definition_xrefs":["RHEA:42344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"p-cumate 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0395","MetaCyc:RXN-664","EC:1.14.12.25"],"termid":"GO:0018570"}


id: PBO:0040148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH1 like histone lysine methyltransferase","termid":"PBO:0040148"}


id: PBO:0080575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 3","termid":"PBO:0080575"}


id: PBO:0073126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC13 homolog, nuclear pore and COPII coat complex component","termid":"PBO:0073126"}


id: PBO:0082018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated B","termid":"PBO:0082018"}


id: GO:0099103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Direct interaction with a channel (binding or modification), resulting in its opening. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"},{"relation_name":"is_a","term_name":"transporter activator activity","termid":"GO:0141109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"channel activator activity","synonyms":[{"name":"channel gating activity","type":"exact"}],"termid":"GO:0099103"}


id: PBO:0063914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta","termid":"PBO:0063914"}


id: PBO:0043644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5 pseudogene 1","termid":"PBO:0043644"}


id: PBO:0076948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor alpha","termid":"PBO:0076948"}


id: PBO:0077646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 3","termid":"PBO:0077646"}


id: PBO:0012592
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPT1","termid":"PBO:0012592"}


id: PBO:0067634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 807, pseudogene","termid":"PBO:0067634"}


id: GO:0051814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism or its progeny spreads from one location to another within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete movement in other organism involved in symbiotic interaction (obsolete GO:0051814)","synonyms":[{"name":"movement in other organism during symbiotic interaction","type":"related"},{"name":"movement within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051814"}


id: PBO:0044244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut like homeobox 1","termid":"PBO:0044244"}


id: PBO:0048644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 4","termid":"PBO:0048644"}


id: PBO:0039200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 3","termid":"PBO:0039200"}


id: MOD:01643
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-methionine.","definition_xrefs":["OMSSA:9","PubMed:3327521","Unimod:765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine removal","synonyms":[{"name":"Met-loss","type":"related"},{"name":"ntermmcleave","type":"exact"}],"termid":"MOD:01643"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84357],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:6.3.2.25-RXN","Reactome:R-HSA-8955706","RHEA:17605"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: PR:Q6LA55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H5.09c gene.","definition_xrefs":["UniProtKB:Q6LA55","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0648 protein C3H5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.09c","synonyms":[{"name":"Spom972h-SPAC3H5.09c","type":"exact"}],"termid":"PR:Q6LA55"}


id: PBO:0073968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 17","termid":"PBO:0073968"}


id: PBO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 4","termid":"PBO:0060684"}


id: GO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a follicular B cell. Follicular B cells are major population of mature recirculating B cells in the spleen and are located in the B-cell follicle region.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular B cell differentiation","synonyms":[{"name":"follicular B cell development","type":"related"},{"name":"follicular B lymphocyte differentiation","type":"exact"},{"name":"follicular B-cell differentiation","type":"exact"},{"name":"follicular B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002316"}


id: PBO:0090761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL family protein Orm1","termid":"PBO:0090761"}


id: PBO:0108897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 10","termid":"PBO:0108897"}


id: PBO:0076076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid perinuclear RNA binding protein","termid":"PBO:0076076"}


id: GO:0006774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete vitamin B12 reduction (obsolete GO:0006774)","synonyms":[{"name":"vitamin B12 reduction","type":"exact"}],"termid":"GO:0006774"}


id: PBO:0018103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0018103"}


id: PBO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 6","termid":"PBO:0012258"}


id: PBO:0071411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 17","termid":"PBO:0071411"}


id: PBO:0038755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3B","termid":"PBO:0038755"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: SO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop_gained (SO:0001587) variant that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_gained","termid":"SO:0001587"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained_NMD_escaping","synonyms":[{"name":"stop gained variant-nonsense-mediated decay escaping","type":"exact"},{"name":"stop gained-NMD escaping","type":"exact"}],"termid":"SO:0002322"}


id: GO:0008047
data:
  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to and increases the activity of an enzyme.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function activator 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id: GO:1904781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to centrosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17115027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to centrosome","termid":"GO:1904779"},{"relation_name":"positively_regulates","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to centrosome","synonyms":[{"name":"activation of protein localisation to centrosome","type":"narrow"},{"name":"activation of protein localization to centrosome","type":"narrow"},{"name":"positive regulation of protein localisation to centrosome","type":"exact"},{"name":"up regulation of protein localisation to centrosome","type":"exact"},{"name":"up regulation of protein localization to centrosome","type":"exact"},{"name":"up-regulation of protein localisation to centrosome","type":"exact"},{"name":"up-regulation of protein localization to centrosome","type":"exact"},{"name":"upregulation of protein localisation to centrosome","type":"exact"},{"name":"upregulation of protein localization to centrosome","type":"exact"}],"termid":"GO:1904781"}


id: PBO:0049839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 3","termid":"PBO:0049839"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: PBO:0075519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member C","termid":"PBO:0075519"}


id: PBO:0027040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_mitotically_up-regulated_genes","termid":"PBO:0027040"}


id: PBO:0017480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_related_to","termid":"PBO:0017480"}


id: PBO:0050935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 5","termid":"PBO:0050935"}


id: GO:0036397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + a quinone = CO2 + a quinol.","definition_xrefs":["RHEA:48592","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.17.5.3","MetaCyc:FORMATEDEHYDROG-RXN","KEGG_REACTION:R09494"],"synonyms":[{"name":"Fdh-N activity","type":"related"},{"name":"formate dehydrogenase-N activity","type":"related"},{"name":"formate:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0036397"}


id: GO:2000243
data:
  {"annotated_genes":["SJAG_01401","SJAG_00266","SJAG_04206","SJAG_00256","SJAG_01345","SJAG_04682","SJAG_03346","SJAG_01113","SJAG_02444","SJAG_01978","SJAG_00100","SJAG_03438","SJAG_02923","SJAG_02266","SJAG_03623","SJAG_00781","SJAG_00664","SJAG_03735","SJAG_02380","SJAG_00457","SJAG_00975","SJAG_00990","SJAG_03340","SJAG_04771","SJAG_00210","SJAG_00117","SJAG_03309","SJAG_00514","SJAG_05288","SJAG_04666","SJAG_02472","SJAG_00145","SJAG_02723","SJAG_04026","SJAG_04259","SJAG_01084","SJAG_02592","SJAG_02404","SJAG_00600","SJAG_06638","SJAG_03371","SJAG_01956","SJAG_04813","SJAG_04312","SJAG_02169","SJAG_03802","SJAG_05000","SJAG_03486","SJAG_01718","SJAG_03048","SJAG_03453","SJAG_04009","SJAG_00472","SJAG_02233","SJAG_04332","SJAG_04853","SJAG_03067","SJAG_01509","SJAG_02379","SJAG_02066","SJAG_01311","SJAG_01794","SJAG_02730","SJAG_01699","SJAG_05153","SJAG_00993","SJAG_02773","SJAG_03081","SJAG_02785","SJAG_00526","SJAG_01254","SJAG_04509","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[91224,86437,105067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051728"},{"annotations":[94484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[111588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[84143,104824,115060,85311,115061,102298,95549,112498,103073,111589,112156,114208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010514"},{"annotations":[102668,105284,98415,101991,101834,100481,114350],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[112084,102514,105035,84319,100536,102670,90439,88992,101835,111535,90298,101928,102866,97895,87487,96587,110482],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[89385],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0090029"},{"annotations":[88259,85331,93112,102299,92442,89386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[84256,103160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000750"},{"annotations":[98340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[114211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075319"},{"annotations":[112500,114212],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[103161,112291,84257,95496,96173,86932,94617,97806,100939,107394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031139"},{"annotations":[90612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"},{"annotations":[112292,96544,100482,99416,83970,95550,97434,104825,104595,115065,115064,103075],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1900237"},{"annotations":[84010,89543,107386,86933,85968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902917"},{"annotations":[109808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[93113,91226,115067,98428,103076,115066,98341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051446"},{"annotations":[104378,98429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905263"},{"annotations":[91227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[85165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[83632,88492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[97672,105069,98438,90613,100941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"},{"annotations":[102401,86938,107387,111591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032005"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"positively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":73,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00117":null,"SJAG_00145":null,"SJAG_00210":null,"SJAG_00256":null,"SJAG_00266":null,"SJAG_00457":null,"SJAG_00472":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00664":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_00993":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01345":null,"SJAG_01401":null,"SJAG_01509":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_01794":null,"SJAG_01956":null,"SJAG_01978":null,"SJAG_02066":null,"SJAG_02169":null,"SJAG_02233":null,"SJAG_02266":null,"SJAG_02379":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_02923":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03340":null,"SJAG_03346":null,"SJAG_03371":null,"SJAG_03438":null,"SJAG_03453":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03623":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04259":null,"SJAG_04312":null,"SJAG_04332":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04682":null,"SJAG_04771":null,"SJAG_04813":null,"SJAG_04853":null,"SJAG_05000":null,"SJAG_05153":null,"SJAG_05288":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of reproductive process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000243","terms_by_termid":{"GO:0000750":null,"GO:0010514":null,"GO:0010515":null,"GO:0010845":null,"GO:0010846":null,"GO:0031139":null,"GO:0031141":null,"GO:0031142":null,"GO:0032005":null,"GO:0051446":null,"GO:0051728":null,"GO:0071507":null,"GO:0075296":null,"GO:0075319":null,"GO:0090029":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0140648":null,"GO:0140748":null,"GO:1900237":null,"GO:1902917":null,"GO:1903024":null,"GO:1905191":null,"GO:1905263":null,"GO:1905326":null}}


id: _global:regulates_o_has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_participant relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_participant","secondary_identifiers":["GOREL:0001016"],"termid":"_global:regulates_o_has_participant"}


id: PBO:0082710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex; interacts with Spc110p at the spindle pole body (SPB) inner plaque and with Spc72p at the SPB outer plaque","termid":"PBO:0082710"}


id: PBO:0054251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1634","termid":"PBO:0054251"}


id: GO:1902268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of polyamine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of polyamine transmembrane transport","termid":"GO:1902267"},{"relation_name":"negatively_regulates","term_name":"polyamine transmembrane transport","termid":"GO:1902047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of polyamine transmembrane transport","synonyms":[{"name":"down regulation of polyamine transmembrane transport","type":"exact"},{"name":"down-regulation of polyamine transmembrane transport","type":"exact"},{"name":"downregulation of polyamine transmembrane transport","type":"exact"},{"name":"inhibition of polyamine transmembrane transport","type":"narrow"}],"termid":"GO:1902268"}


id: PBO:0082774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU; required for pre-18S rRNA processing, biogenesis of the small ribosomal subunit; interacts with U3 snoRNA, Mpp10p and Bfr2p; contains WD repeats, and has homology to Spb1p","termid":"PBO:0082774"}


id: GO:0010250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of S-methyl-methionine (SMM) from methionine and S-adenosyl-methionine (Ado-Met), catalyzed by methionine S-methyltransferase (MMT). SMM can be reconverted to methionine by donating a methyl group to homocysteine, and concurrent operation of this reaction and that mediated by MMT sets up the SMM cycle.","definition_xrefs":["PMID:12692340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methylmethionine metabolic process","termid":"GO:0033477"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-methylmethionine biosynthetic process","synonyms":[{"name":"S-methylmethionine anabolism","type":"exact"},{"name":"S-methylmethionine biosynthesis","type":"exact"},{"name":"S-methylmethionine formation","type":"exact"},{"name":"S-methylmethionine synthesis","type":"exact"}],"termid":"GO:0010250"}


id: GO:0102983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-xylose + a homogalacturonan = UDP + 4 H+ + a xylogalacturonan.","definition_xrefs":["EC:2.4.2.41","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"xylogalacturonan beta-1,3-xylosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9589"],"termid":"GO:0102983"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:tb","PMID:17998288","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: PBO:0044432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 26, pseudogene","termid":"PBO:0044432"}


id: PBO:0081805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 734, pseudogene","termid":"PBO:0081805"}


id: GO:0039580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts host PKR (Protein Kinase regulated by RNA) signaling. PKR phosphorylates host targets such as the translation initiation factor eIF2alpha that inhibits protein synthesis as an antimicrobial response. Inhibition of host PKR signaling maintains the host ability to translate mRNA. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15207627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host PKR/eIFalpha signaling","secondary_identifiers":["VZ:554"],"synonyms":[{"name":"suppression by virus of host EIF2AK2 activity","type":"narrow"},{"name":"suppression by virus of host PKR activity","type":"narrow"},{"name":"suppression by virus of host PKR signaling","type":"narrow"}],"termid":"GO:0039580"}


id: PBO:0064570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 2","termid":"PBO:0064570"}


id: PBO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 2","termid":"PBO:0061611"}


id: GO:0008790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose = D-ribulose.","definition_xrefs":["EC:5.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"arabinose isomerase activity","secondary_identifiers":["MetaCyc:DARABISOM-RXN","RHEA:13849"],"synonyms":[{"name":"D-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose isomerase activity","type":"narrow"},{"name":"D-arabinose ketol-isomerase activity","type":"related"},{"name":"D-arabinose(L-fucose) isomerase activity","type":"related"}],"termid":"GO:0008790"}


id: PR:Q09919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fip1 gene.","definition_xrefs":["UniProtKB:Q09919","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.07c","synonyms":[{"name":"Spom972h-fip1","type":"exact"}],"termid":"PR:Q09919"}


id: PBO:0080193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 1","termid":"PBO:0080193"}


id: GO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + phosphate = D-fructose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sucrose phosphorylase activity","secondary_identifiers":["RHEA:24048","MetaCyc:SUCROSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"disaccharide glucosyltransferase activity","type":"broad"},{"name":"sucrose glucosyltransferase activity","type":"related"},{"name":"sucrose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0009018"}


id: PBO:0080592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 19","termid":"PBO:0080592"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: PBO:0001643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid dehydrogenase (predicted)","termid":"PBO:0001643"}


id: GO:0038082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of osmosensory signaling pathway (obsolete GO:0038082)","synonyms":[{"name":"Hog1 phosphatase activity","type":"narrow"},{"name":"MAP kinase phosphatase activity involved in regulation of osmosensory signalling pathway","type":"exact"},{"name":"MAPK phosphatase activity involved in regulation of osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038082"}


id: GO:0052012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host cell wall chitin (obsolete GO:0052012)","synonyms":[{"name":"catabolism by organism of host cell wall chitin","type":"exact"}],"termid":"GO:0052012"}


id: GO:0035883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an enteroendocrine cell. Enteroendocrine cells are hormonally active epithelial cells in the gut that constitute the diffuse neuroendocrine system.","definition_xrefs":["GOC:bf","CL:0000164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteroendocrine cell differentiation","termid":"GO:0035883"}


id: GO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues.","definition_xrefs":["ISBN:0198547684","RESID:AA0247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"keratan sulfate metabolic process","termid":"GO:0042339"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"keratan sulfate biosynthetic process","synonyms":[{"name":"keratan sulfate anabolism","type":"exact"},{"name":"keratan sulfate biosynthesis","type":"exact"},{"name":"keratan sulfate formation","type":"exact"},{"name":"keratan sulfate synthesis","type":"exact"},{"name":"keratan sulphate biosynthesis","type":"exact"},{"name":"keratan sulphate biosynthetic process","type":"exact"}],"termid":"GO:0018146"}


id: GO:2001025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"positively_regulates","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to drug","synonyms":[{"name":"positive regulation of drug resistance","type":"related"},{"name":"positive regulation of drug susceptibility/resistance","type":"related"}],"termid":"GO:2001025"}


id: FYPO:0007587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to endosome","synonyms":[{"name":"abnormal protein localisation to endosome","type":"exact"},{"name":"abnormal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to endosome during vegetative growth","type":"exact"},{"name":"abnormal protein targeting to endosome","type":"related"}],"termid":"FYPO:0007587"}


id: PBO:0086035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in mitochondria; expression is regulated by transcription factors involved in pleiotropic drug resistance, Pdr1p and Yrr1p; not an essential gene; YLR346C has a paralog, YGR035C, that arose from the whole genome duplication","termid":"PBO:0086035"}


id: PR:P78763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C83.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.13","synonyms":[{"name":"Spom972h-SPBC83.13","type":"exact"}],"termid":"PR:P78763"}


id: PBO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 2","termid":"PBO:0046702"}


id: GO:0005545
data:
  {"annotated_genes":["SJAG_01748","SJAG_01722"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102050,104231],"is_not":false,"summary":null,"term":"GO:0005545"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol, a glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01722":null,"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"1-phosphatidylinositol binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005545","terms_by_termid":{"GO:0005545":null}}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["PMID:10769383","GO_REF:0000079","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: GO:0035429
data:
  {"annotated_genes":["SJAG_04920","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[86026],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which gluconate is transported across a membrane. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015725"],"synonyms":[{"name":"gluconate membrane transport","type":"exact"},{"name":"gluconate transport","type":"related"}],"termid":"GO:0035429","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: PBO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthetase (predicted)","termid":"PBO:0005036"}


id: PBO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0085013"}


id: PBO:0058934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS18A antisense RNA 1","termid":"PBO:0058934"}


id: PBO:0026911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0026911"}


id: PBO:0066411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reelin","termid":"PBO:0066411"}


id: GO:0050940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"late stripe melanocyte differentiation","termid":"GO:0050934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of late stripe melanocyte differentiation","synonyms":[{"name":"regulation of late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050940"}


id: PATO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Increased, intensified.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001589 enhanced (obsolete PATO:0001589)","termid":"PATO:0001589"}


id: GO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic joint molecule formation","termid":"GO:0010946"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic joint molecule formation","termid":"GO:0000709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiotic joint molecule formation","termid":"GO:0010947"}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: PBO:0080308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 72 pseudogene","termid":"PBO:0080308"}


id: PBO:0003554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad1","termid":"PBO:0003554"}


id: GO:1905393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the plant organ. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb","GOC:TermGenie","GO_REF:0000081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant organ formation","termid":"GO:1905393"}


id: GO:0021941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that stops, prevents or reduces the rate or extent of granule cell precursor proliferation.","definition_xrefs":["GOC:dph","GOC:cls","PMID:15157725","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021936"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebellar granule cell precursor proliferation","synonyms":[{"name":"down regulation of granule cell precursor proliferation","type":"exact"},{"name":"down-regulation of granule cell precursor proliferation","type":"exact"},{"name":"downregulation of granule cell precursor proliferation","type":"exact"},{"name":"inhibition of granule cell precursor proliferation","type":"narrow"}],"termid":"GO:0021941"}


id: MOD:01716
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"},{"relation_name":"derives_from","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"cysTMT6plex reporter fragment","type":"exact"}],"termid":"MOD:01716"}


id: GO:0102155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfonatolactate + NAD = 3-sulfonatopyruvate(2-) + NADH + H+.","definition_xrefs":["EC:1.1.1.310","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-sulfolactate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11689","RHEA:28194"],"termid":"GO:0102155"}


id: PBO:0041051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 2","termid":"PBO:0041051"}


id: GO:0006259
data:
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