# terms

id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["ChEBI:64723","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: GO:0019908
data:
  {"annotated_genes":["SJAG_01213","SJAG_01149","SJAG_03061","SJAG_02057","SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91868,106933],"is_not":false,"summary":null,"term":"GO:0019908"},{"annotations":[113000,91867,106930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[105053,104893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"}]},"cv_name":"cellular_component","definition":"Cyclin-dependent protein kinase (CDK) complex found in the nucleus.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01149":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nuclear cyclin-dependent protein kinase holoenzyme complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDK holoenzyme","type":"broad"}],"termid":"GO:0019908","terms_by_termid":{"GO:0019908":null,"GO:0070691":null,"GO:0070692":null}}


id: PBO:0072529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 59","termid":"PBO:0072529"}


id: PBO:0071701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39","termid":"PBO:0071701"}


id: SO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytologically observable heterochromatic regions of chromosomes away from centromeres that contain predominatly large tandem repeats and retrotransposons.","definition_xrefs":["PMID:6439888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knob","synonyms":[{"name":"Heterochromatin Knob","type":"exact"}],"termid":"SO:0002257"}


id: PBO:0038971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA2A antisense RNA 1","termid":"PBO:0038971"}


id: GO:0061643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to a repulsive chemical cue.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of axon","termid":"GO:0061643"}


id: PBO:0070626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 10","termid":"PBO:0070626"}


id: GO:1902182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a shoot apical meristem over time, from its formation to the mature structure.","definition_xrefs":["PMID:21496644","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot apical meristem development","synonyms":[{"name":"SAM development","type":"exact"},{"name":"primary shoot meristem development","type":"related"},{"name":"promeristem development","type":"broad"}],"termid":"GO:1902182"}


id: GO:1904377
data:
  {"annotated_genes":["SJAG_00030","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["PMID:18216290","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"positively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localization to cell periphery","type":"narrow"},{"name":"up regulation of protein localization to cell periphery","type":"exact"},{"name":"up-regulation of protein localization to cell periphery","type":"exact"},{"name":"upregulation of protein localization to cell periphery","type":"exact"}],"termid":"GO:1904377","terms_by_termid":{"GO:0120047":null,"GO:1903078":null}}


id: FYPO:0008215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of GTPase inhibitor O1 than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to Rho GTPase inhibitor O1","termid":"FYPO:0008215"}


id: PBO:0082196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinity than for allantoate and ureidosuccinate; expression is constitutive but sensitive to nitrogen catabolite repression","termid":"PBO:0082196"}


id: PBO:0028867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_mRNA_level_during_vegetative_growth","termid":"PBO:0028867"}


id: PR:Q9P7F4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2E1P3.01 gene.","definition_xrefs":["UniProtKB:Q9P7F4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C2E1P3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2E1P3.01","synonyms":[{"name":"Spom972h-SPAC2E1P3.01","type":"exact"}],"termid":"PR:Q9P7F4"}


id: GO:1902846
data:
  {"annotated_genes":["SJAG_00082","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86096,90483],"is_not":false,"summary":null,"term":"GO:1902846"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic spindle elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic spindle elongation","type":"narrow"},{"name":"activation of spindle elongation during mitosis","type":"narrow"},{"name":"positive regulation of spindle elongation during mitosis","type":"exact"},{"name":"up regulation of mitotic spindle elongation","type":"exact"},{"name":"up regulation of spindle elongation during mitosis","type":"exact"},{"name":"up-regulation of mitotic spindle elongation","type":"exact"},{"name":"up-regulation of spindle elongation during mitosis","type":"exact"},{"name":"upregulation of mitotic spindle elongation","type":"exact"},{"name":"upregulation of spindle elongation during mitosis","type":"exact"}],"termid":"GO:1902846","terms_by_termid":{"GO:1902846":null}}


id: GO:0061285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mesonephric capsule over time, from its formation to the mature structure. The mesonephric capsule is the tough fibrous layer surrounding the mesonephros, covered in a thick layer of perinephric adipose tissue.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule development","termid":"GO:0072127"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule development","termid":"GO:0061285"}


id: PBO:0040578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAALC binder of MAP3K1 and KLF4","termid":"PBO:0040578"}


id: GO:2001057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a reactive nitrogen species.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive nitrogen species metabolic process","synonyms":[{"name":"RNS metabolic process","type":"exact"},{"name":"RNS metabolism","type":"exact"},{"name":"reactive nitrogen species metabolism","type":"exact"}],"termid":"GO:2001057"}


id: PBO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 1","termid":"PBO:0061518"}


id: PBO:0086263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p; similar to human Ten1 which is critical for the telomeric function of the CST (Cdc13p-Stn1p-Ten1p) complex","termid":"PBO:0086263"}


id: PBO:0068395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 214","termid":"PBO:0068395"}


id: PBO:0084584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR055C was originally annotated as an independent ORF, but as a result of sequence changes, it was merged with two other ORFs into a single reading frame, designated YCR057C","termid":"PBO:0084584"}


id: PBO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex A box associated subunit Sfc1","termid":"PBO:0000914"}


id: PBO:0075533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E13","termid":"PBO:0075533"}


id: PBO:0052916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 16-1","termid":"PBO:0052916"}


id: PBO:0113515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB protein kinase-like family member; mitochondrial inner membrane protein that interacts with outer membrane proteins Por1p and Om14p to form a MICOS-independent mitochondrial contact site; role in mitochondrial organization; contributes to mitochondrial lipid homeostasis; controls the cellular distribution of coenzyme Q (CoQ); contains a potential mitochondrial targeting sequence and predicted transmembrane domain","termid":"PBO:0113515"}


id: FYPO:0007023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 1-methylguanosine occurs to a greater extent than normal.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased tRNA guanosine 1-methylation","synonyms":[{"name":"increased 1-methylguanosine level in tRNA","type":"related"},{"name":"increased guanosine N1-methylation","type":"exact"},{"name":"increased tRNA 1-methylguanosine formation","type":"exact"},{"name":"increased tRNA guanosine 1-methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA guanosine 1-methylation during vegetative growth","type":"exact"},{"name":"increased tRNA m1G formation","type":"exact"}],"termid":"FYPO:0007023"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: GO:0141200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + thiamine = UMP + thiamine diphosphate.","definition_xrefs":["PMID:38547260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UTP thiamine diphosphokinase activity","termid":"GO:0141200"}


id: PR:P0CT43
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-8 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.09c","synonyms":[{"name":"Spom972h-Tf2-8","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT43"}


id: GO:0102501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NADP = NADPH + H+ + D-fructuronate.","definition_xrefs":["GOC:pz","PMID:22925190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-fructuronate reductase activity","secondary_identifiers":["MetaCyc:RXN-14368"],"termid":"GO:0102501"}


id: GO:1904980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome organization.","definition_xrefs":["GO_REF:0000058","GOC:pad","GOC:PARL","PMID:22511594","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"positively_regulates","term_name":"endosome organization","termid":"GO:0007032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endosome organization","synonyms":[{"name":"activation of endosome organisation","type":"narrow"},{"name":"activation of endosome organization","type":"narrow"},{"name":"activation of endosome organization and biogenesis","type":"related"},{"name":"positive regulation of endosome organisation","type":"exact"},{"name":"positive regulation of endosome organization and biogenesis","type":"related"},{"name":"up regulation of endosome organisation","type":"exact"},{"name":"up regulation of endosome organization","type":"exact"},{"name":"up regulation of endosome organization and biogenesis","type":"related"},{"name":"up-regulation of endosome organisation","type":"exact"},{"name":"up-regulation of endosome organization","type":"exact"},{"name":"up-regulation of endosome organization and biogenesis","type":"related"},{"name":"upregulation of endosome organisation","type":"exact"},{"name":"upregulation of endosome organization","type":"exact"},{"name":"upregulation of endosome organization and biogenesis","type":"related"}],"termid":"GO:1904980"}


id: PBO:0054265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1650","termid":"PBO:0054265"}


id: GO:0033584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3461"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine formation from chorismate via L-arogenate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via L-arogenate","type":"broad"}],"termid":"GO:0033584"}


id: GO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3-alpha-D-mannosyl-1,2-alpha-D-mannosyl-1,2-alpha-D-mannosyl-D-mannose + UDP-N-acetyl-D-glucosamine = 1,3-alpha-D-mannosyl-1,2-(N-acetyl-alpha-D-glucosaminyl-alpha-D-mannosyl)-1,2-alpha-D-mannosyl-D-mannose + UDP.","definition_xrefs":["EC:2.4.1.138","MetaCyc:2.4.1.138-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"mannotetraose 2-alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:13705"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:mannotetraose alpha-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine mannoside alpha1->2-alphacetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047222"}


id: GO:0003688
data:
  {"annotated_genes":["SJAG_05301","SJAG_02800","SJAG_03216","SJAG_03927","SJAG_05239","SJAG_02394","SJAG_01762","SJAG_01267","SJAG_03451","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93395,93501,101512,103867,104074,106246,107410,107665,109204,111121],"is_not":false,"summary":null,"term":"GO:0003688"}]},"cv_name":"molecular_function","definition":"Binding to a DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01267":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02800":null,"SJAG_03216":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"DNA replication origin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ARS binding","type":"narrow"}],"termid":"GO:0003688","terms_by_termid":{"GO:0003688":null}}


id: PBO:0062093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 43 pseudogene","termid":"PBO:0062093"}


id: PBO:0066967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 269","termid":"PBO:0066967"}


id: PBO:0075842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 3","termid":"PBO:0075842"}


id: PBO:0003752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L7 (predicted)","termid":"PBO:0003752"}


id: PBO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3c","termid":"PBO:0001624"}


id: FYPO:0007787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the meiotic cell cycle is arrested at the G2/MI phase transition. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription during cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"increased transcription during abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"}],"termid":"FYPO:0007787"}


id: PBO:0002393
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damage Assistance Protein","termid":"PBO:0002393"}


id: PBO:0086301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ubiquinone (Coenzyme Q) biosynthesis; possibly functioning in stabilization of Coq7p; located on matrix face of mitochondrial inner membrane; component of a mitochondrial ubiquinone-synthesizing complex; human homolog COQ4 can complement yeast coq4 null mutant","termid":"PBO:0086301"}


id: PBO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 128","termid":"PBO:0075078"}


id: CHEBI:17191
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine","termid":"CHEBI:17191"}


id: FYPO:0006579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to manganese. Cells stop growing (and may die) at a concentration of manganese ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to manganese","synonyms":[{"name":"hypersensitive to manganese","type":"exact"},{"name":"sensitive to manganese during mitotic cell cycle","type":"related"},{"name":"sensitive to manganese during vegetative growth","type":"exact"},{"name":"sensitive to manganese ions","type":"exact"}],"termid":"FYPO:0006579"}


id: PBO:0081503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 407","termid":"PBO:0081503"}


id: GO:0009145
data:
  {"annotated_genes":["SJAG_00915","SJAG_00985","SJAG_04122","SJAG_02887","SJAG_00836","SJAG_00133","SJAG_03925","SJAG_07003","SJAG_01471","SJAG_00885","SJAG_02564","SJAG_02598","SJAG_04849","SJAG_MIT09","SJAG_05204","SJAG_00542","SJAG_MIT37","SJAG_03114","SJAG_00438","SJAG_MIT15","SJAG_04422","SJAG_01298","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96122,98288,104295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[99703,85231,115043,115037,89342,88920,103926,111854,89937,101032,115047,99079,97864,90910,104808,99732,103837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[103285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[113989],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00885":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside triphosphate anabolism","type":"exact"},{"name":"purine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine nucleoside triphosphate formation","type":"exact"},{"name":"purine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009145","terms_by_termid":{"GO:0006183":null,"GO:0009216":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: PBO:0054799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2212","termid":"PBO:0054799"}


id: FYPO:0004058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination at a CRE promoter in a chromosome is decreased.","definition_xrefs":["PMID:19436749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased meiotic recombination at CRE promoter","synonyms":[{"name":"decreased meiotic recombination at M26 site","type":"exact"},{"name":"reduced meiotic recombination at CRE promoter","type":"exact"}],"termid":"FYPO:0004058"}


id: FYPO:0002685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered cellular trehalose level","termid":"FYPO:0001446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level","synonyms":[{"name":"increased trehalose accumulation","type":"related"}],"termid":"FYPO:0002685"}


id: PBO:0072860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seryl-tRNA synthetase 1","termid":"PBO:0072860"}


id: PBO:0074017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 11","termid":"PBO:0074017"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: GO:0008571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. This is a highly diverse group of enzymes that perform many functions that are similar to those of chaperonins. They comprise a number of heat-shock-cognate proteins. They are also active in clathrin uncoating and in the oligomerization of actin.","definition_xrefs":["EC:3.6.4.10"],"gene_count":0,"genotype_count":0,"name":"obsolete non-chaperonin molecular chaperone ATPase activity (obsolete GO:0008571)","synonyms":[{"name":"non-chaperonin molecular chaperone ATPase activity","type":"exact"}],"termid":"GO:0008571"}


id: PBO:0084510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of a complex (Isw1b) with Isw1p and Ioc2p; interacts directly with H3K36me3 nucleosomes through its PWWP domain to recruit the Isw1b complex to open reading frames in a Set2p-dependent manner; Isw1b exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing","termid":"PBO:0084510"}


id: PBO:0066629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA sensor RIG-I","termid":"PBO:0066629"}


id: PBO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 30","termid":"PBO:0047390"}


id: GO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor PERK (PKR-like ER kinase). Begins with activation of PERK in response to endoplasmic reticulum (ER) stress and ends with regulation of a downstream cellular process, e.g. transcription. The main substrate of PERK is the translation initiation factor eIF2alpha. Serine-phosphorylation of eIF2alpha by PERK inactivates eIF2alpha and inhibits general protein translation. In addition, eIF2alpha phosphorylation preferentially increases the translation of selective mRNAs such as ATF4 (activating transcription factor 4), which up regulates a subset of UPR genes required to restore folding capacity.","definition_xrefs":["PMID:22013210","PMID:27629041","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"},{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"PERK-mediated unfolded protein response","synonyms":[{"name":"EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"PERK branch of UPR","type":"exact"},{"name":"PERK signal transduction pathway","type":"broad"},{"name":"PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"PKR-like ER kinase signal transduction","type":"exact"},{"name":"UPR signaling by PERK stress sensor","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"},{"name":"eukaryotic translation initiation factor 2-alpha kinase 3-mediated unfolded protein response","type":"related"}],"termid":"GO:0036499"}


id: PBO:0038687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTA2 antisense RNA 1","termid":"PBO:0038687"}


id: PBO:0077255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 6","termid":"PBO:0077255"}


id: GO:0030213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"hyaluronan metabolic process","termid":"GO:0030212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyaluronan biosynthetic process","synonyms":[{"name":"hyaluronan anabolism","type":"exact"},{"name":"hyaluronan biosynthesis","type":"exact"},{"name":"hyaluronan formation","type":"exact"},{"name":"hyaluronan synthesis","type":"exact"}],"termid":"GO:0030213"}


id: GO:0016118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid catabolic process","termid":"GO:0016110"},{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid catabolic process","synonyms":[{"name":"carotenoid breakdown","type":"exact"},{"name":"carotenoid catabolism","type":"exact"},{"name":"carotenoid degradation","type":"exact"}],"termid":"GO:0016118"}


id: GO:1902278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:TermGenie","GOC:jc","PMID:19028687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"},{"relation_name":"positively_regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion","synonyms":[{"name":"activation of pancreatic amylase secretion","type":"narrow"},{"name":"up regulation of pancreatic amylase secretion","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion","type":"exact"},{"name":"upregulation of pancreatic amylase secretion","type":"exact"}],"termid":"GO:1902278"}


id: GO:0035640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism in response to a novel environment or stimulus.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:11682103","PMID:9767169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exploration behavior","synonyms":[{"name":"exploration behaviour","type":"exact"},{"name":"exploratory behavior","type":"exact"},{"name":"exploratory behaviour","type":"exact"},{"name":"open-field behavior","type":"narrow"}],"termid":"GO:0035640"}


id: FYPO:0001997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}


id: PBO:0079101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed basic protein 1","termid":"PBO:0079101"}


id: PR:Q9URZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cat1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.11","synonyms":[{"name":"Spom972h-cat1","type":"exact"}],"termid":"PR:Q9URZ4"}


id: PBO:0086943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras-type GTPase; required for bud site selection during both axial and bipolar budding, for morphological changes in response to mating pheromone, and for efficient cell fusion; recruits Cdc24p to the incipient bud site, activating its guanyl-nucleotide exchange factor activity and the Rho-like GTPase, Cdc42p; localizes to the plasma membrane, the incipient bud site, polarized growth sites, the cell division site and the vacuole membrane; Ras superfamily member similar to mammalian Rap GTPases","termid":"PBO:0086943"}


id: FYPO:0001836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to spindle pole body","synonyms":[{"name":"normal protein localisation to spindle pole body","type":"exact"},{"name":"normal protein localization to SPB","type":"exact"}],"termid":"FYPO:0001836"}


id: PBO:0046324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 2","termid":"PBO:0046324"}


id: GO:1990264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any peptidyl-tyrosine dephosphorylation that is involved in inactivation of protein kinase activity.","definition_xrefs":["PMID:7501024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"},{"relation_name":"part_of","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity","termid":"GO:1990264"}


id: GO:0075013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont on or near host phyllosphere (obsolete GO:0075013)","synonyms":[{"name":"growth or development of symbiont on or near host phyllosphere","type":"exact"}],"termid":"GO:0075013"}


id: GO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetyl-[citrate-oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + S-acetylphosphopantetheine = [citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + pantetheine 4'-phosphate.","definition_xrefs":["MetaCyc:2.3.1.49-RXN","EC:2.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"deacetyl-[citrate-(pro-3S)-lyase] S-acetyltransferase activity","secondary_identifiers":["RHEA:20393"],"synonyms":[{"name":"S-acetyl phosphopantetheine:deacetyl citrate lyase S-acetyltransferase activity","type":"related"},{"name":"S-acetylphosphopantetheine:deacetyl-citrate-oxaloacetate-lyase((pro-3S)-CH2COO-rightacetate)S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase acetyltransferase activity","type":"related"}],"termid":"GO:0047187"}


id: GO:0009128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside monophosphate catabolic process","synonyms":[{"name":"purine nucleoside monophosphate breakdown","type":"exact"},{"name":"purine nucleoside monophosphate catabolism","type":"exact"},{"name":"purine nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009128"}


id: GO:0102381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stevioside + UDP-alpha-D-glucose = H+ + rebaudioside A + UDP.","definition_xrefs":["RHEA:61756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"stevioside glucosyltransferase activity (rebaudioside A forming)","secondary_identifiers":["MetaCyc:RXN-13517"],"termid":"GO:0102381"}


id: PBO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase (predicted)","termid":"PBO:0001586"}


id: GO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF7-dependent gene transcription, by promoting the sumoylation of IRF7, thereby disabling its activity.","definition_xrefs":["VZ:653","PMID:18635538","PMID:19694547"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation (obsolete GO:0039558)","synonyms":[{"name":"promotion of IRF-7 SUMOylation","type":"exact"},{"name":"suppression by virus of host interferon regulatory factor-7 activity by positive regulation of IRF7 sumoylation","type":"related"}],"termid":"GO:0039558"}


id: PBO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 2","termid":"PBO:0048146"}


id: PBO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 36","termid":"PBO:0070570"}


id: PBO:0052367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 15","termid":"PBO:0052367"}


id: FYPO:0004540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is incrsasd. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin silencing","synonyms":[{"name":"increased chromatin silencing during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing during vegetative growth","type":"exact"}],"termid":"FYPO:0004540"}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: GO:0008147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of bone","termid":"GO:0008147"}


id: PBO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator (predicted)","termid":"PBO:0002229"}


id: PBO:0041825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0041825"}


id: GO:0102349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA + NADP = trans-2-tetracosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-lignocero-2-enoyl-CoA reductase activity (obsolete GO:0102349)","termid":"GO:0102349"}


id: FYPO:0004806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cell wall is broken down to a lesser extent than in wild type at the site of cell-cell fusion during mating.","definition_xrefs":["PMID:25825517","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall disassembly at cell fusion site","termid":"FYPO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0004805","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"incomplete cell wall disassembly at cell fusion site","synonyms":[{"name":"incomplete cell wall disassembly at cell fusion site during conjugation with cellular fusion","type":"exact"},{"name":"incomplete cell wall disassembly at cell fusion site during mating","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion focus","type":"exact"},{"name":"incomplete cell wall disassembly at cell-cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly at cell fusion site","type":"exact"},{"name":"incomplete fungal-type cell wall disassembly involved in conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004806"}


id: GO:1901679
data:
  {"annotated_genes":["SJAG_00154","SJAG_03334","SJAG_02050","SJAG_03452","SJAG_03503","SJAG_04325","SJAG_04328","SJAG_00760","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61269,106917],"is_not":false,"summary":null,"term":"GO:1901679"},{"annotations":[102721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[61270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035350"},{"annotations":[111158,63286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[106916,98902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[103590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[88970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[95350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of nucleotide across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nucleotide transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide membrane transport","type":"exact"}],"termid":"GO:1901679","terms_by_termid":{"GO:0035348":null,"GO:0035350":null,"GO:0140021":null,"GO:1901679":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: GO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by organism of cell wall pectin in other organism involved in symbiotic interaction (obsolete GO:0052341)","synonyms":[{"name":"catabolism by organism of cell wall pectin in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052341"}


id: PBO:0072573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase regulatory TP53 inducible subunit M2B","termid":"PBO:0072573"}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: GO:0007059
data:
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id: PBO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_along_microtubule","termid":"PBO:0034672"}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: PBO:0026636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid_binding","termid":"PBO:0026636"}


id: PBO:0070178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 93 pseudogene","termid":"PBO:0070178"}


id: GO:0150195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances (e.g. macromolecules, small molecules, ions) through the blood-cerebrospinal fluid barrier.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:21349151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"transport across blood-cerebrospinal fluid barrier","synonyms":[{"name":"transport across BCSFB","type":"exact"},{"name":"transport across blood-CSF barrier","type":"exact"},{"name":"transport across blood/CSF barrier","type":"exact"},{"name":"transport across blood/cerebrospinal fluid barrier","type":"exact"}],"termid":"GO:0150195"}


id: FYPO:0003515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-selenoneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"L-selenoneine absent from cell","termid":"FYPO:0003515"}


id: GO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multiplication or reproduction of fibroblast cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast proliferation","termid":"GO:0048145"}


id: GO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of proteins that interact with the ephrin receptors.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ephrin (obsolete GO:0005106)","synonyms":[{"name":"ephrin","type":"exact"}],"termid":"GO:0005106"}


id: PBO:0091132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein","termid":"PBO:0091132"}


id: GO:0140948
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106514],"is_not":false,"summary":null,"term":"GO:0140948"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me.","definition_xrefs":["RHEA:60288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0008276","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"histone H3K9 monomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.367"],"synonyms":[{"name":"histone H3-K9 methylation","type":"broad"},{"name":"histone H3K9 methylation","type":"broad"},{"name":"histone H3K9 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140948","terms_by_termid":{"GO:0140948":null}}


id: GO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an alkanesulfonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanesulfonates are organic esters or salts of sulfonic acid containing an aliphatic hydrocarbon radical.","definition_xrefs":["PMID:31802112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"organic acid transmembrane transport","termid":"GO:1903825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"alkanesulfonate transmembrane transport","synonyms":[{"name":"alkanesulfonate transport","type":"broad"},{"name":"alkanesulphonate transport","type":"broad"}],"termid":"GO:0042918"}


id: PBO:0039304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK and LTK ligand 1","termid":"PBO:0039304"}


id: PR:Q9UTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- etd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein etd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.08","synonyms":[{"name":"Spom972h-etd1","type":"exact"}],"termid":"PR:Q9UTR4"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: PBO:0004221
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi Interacting protein","termid":"PBO:0004221"}


id: GO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation involved in immune response","synonyms":[{"name":"mast cell activation during immune response","type":"related"}],"termid":"GO:0002279"}


id: GO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the mitochondrial membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex (obsolete GO:0005753)","synonyms":[{"name":"mitochondrial respiratory chain complex V","type":"exact"}],"termid":"GO:0005753"}


id: PBO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6 (predicted)","termid":"PBO:0031910"}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: GO:0051046
data:
  {"annotated_genes":["SJAG_03763","SJAG_02366","SJAG_04509","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[84016,94464,89915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of secretion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051046","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: PBO:0039321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase, 12S type","termid":"PBO:0039321"}


id: GO:0016635
data:
  {"annotated_genes":["SJAG_00260","SJAG_00197","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[84930,85289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.","definition_xrefs":["EC:1.3.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016635","terms_by_termid":{"GO:0008177":null,"GO:0106430":null}}


id: GO:1903914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GO_REF:0000058","PMID:23575248","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral entry into host cell","termid":"GO:0046597"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"negatively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"down regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down regulation of viral-cell fusion molecule activity","type":"related"},{"name":"down-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"downregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"downregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"downregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"downregulation of viral penetration via membrane fusion","type":"exact"},{"name":"downregulation of viral-cell fusion molecule activity","type":"related"},{"name":"inhibition of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"inhibition of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"inhibition of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"inhibition of viral penetration via membrane fusion","type":"narrow"},{"name":"inhibition of viral-cell fusion molecule activity","type":"related"},{"name":"negative regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"negative regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"negative regulation of viral penetration via membrane fusion","type":"exact"},{"name":"negative regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903914"}


id: GO:0031717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cannabinoid receptor binding","synonyms":[{"name":"cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031717"}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["PMID:7683668","GOC:TermGenie","GOC:bc","GO_REF:0000059","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate binding","termid":"GO:1905853"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: GO:0036350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to mannose residues on the other.","definition_xrefs":["PMID:9851992","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"mannose-specific flocculation","secondary_identifiers":["GO:0098612"],"synonyms":[{"name":"cell-cell adhesion involved in mannose-specific flocculation","type":"exact"}],"termid":"GO:0036350"}


id: GO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce"],"synonyms":[{"name":"TCE metabolic process","type":"exact"},{"name":"TCE metabolism","type":"exact"},{"name":"trichloroethene metabolic process","type":"exact"},{"name":"trichloroethene metabolism","type":"exact"},{"name":"trichloroethylene metabolism","type":"exact"}],"termid":"GO:0018979"}


id: GO:1904984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:19843166","PMID:12140278","GOC:TermGenie","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of quinolinate biosynthetic process","synonyms":[{"name":"regulation of quinolinate anabolism","type":"exact"},{"name":"regulation of quinolinate biosynthesis","type":"exact"},{"name":"regulation of quinolinate formation","type":"exact"},{"name":"regulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904984"}


id: PBO:0041768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 8","termid":"PBO:0041768"}


id: GO:0003006
data:
  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developmental process in which a progressive change in the state of some part of an organism, germline or somatic, specifically contributes to its ability to form offspring.","definition_xrefs":["GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"developmental 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process involved in reproduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"puberty","type":"narrow"},{"name":"reproductive developmental process","type":"related"}],"termid":"GO:0003006","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0071998":null,"GO:0072000":null,"GO:0072316":null,"GO:0075296":null,"GO:0075297":null,"GO:0075319":null,"GO:1903024":null}}


id: PR:Q9US38
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.03 gene.","definition_xrefs":["UniProtKB:Q9US38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AB hydrolase superfamily protein C1039.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.03","synonyms":[{"name":"Spom972h-SPAC1039.03","type":"exact"}],"termid":"PR:Q9US38"}


id: PBO:0062020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 1 pseudogene","termid":"PBO:0062020"}


id: PBO:0029193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore","termid":"PBO:0029193"}


id: PBO:0076456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 2","termid":"PBO:0076456"}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: PBO:0073144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23A antisense RNA 1","termid":"PBO:0073144"}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_01637","SJAG_03385","SJAG_01678","SJAG_04309","SJAG_02197","SJAG_01886","SJAG_01472"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84410,91144,92670,93464,97915,103892,110266],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:12686616","PMID:18508925","PMID:35682545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: PBO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 97","termid":"PBO:0042044"}


id: GO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle targeting (obsolete GO:0005482)","synonyms":[{"name":"vesicle targeting","type":"exact"}],"termid":"GO:0005482"}


id: PBO:0013447
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CHS5","termid":"PBO:0013447"}


id: PBO:0028339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_DNA_level","termid":"PBO:0028339"}


id: PBO:0087078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L39; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1; homologous to mammalian ribosomal protein L39, no bacterial homolog","termid":"PBO:0087078"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: GO:0035175
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112701],"is_not":false,"summary":null,"term":"GO:0035175"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 10) + ATP = histone H3-phosphoserine (position 10) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 10 of histone H3.","definition_xrefs":["GOC:bf","PMID:15041176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0004672","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"histone H3S10 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0044021"],"synonyms":[{"name":"histone kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S10 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0035175","terms_by_termid":{"GO:0035175":null}}


id: PBO:0040536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 2","termid":"PBO:0040536"}


id: PBO:0082541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein; YDR134C has a paralog, CCW12, that arose from the whole genome duplication; S. cerevisiae genome reference strain S288C contains an internal in-frame stop at codon 67, which in other strains encodes glutamine","termid":"PBO:0082541"}


id: PBO:0047845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 1","termid":"PBO:0047845"}


id: GO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"},{"relation_name":"part_of","term_name":"male genitalia development","termid":"GO:0030539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"related"}],"termid":"GO:0048808"}


id: PBO:0076655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 18","termid":"PBO:0076655"}


id: FYPO:0007084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to sulfur starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah","PMID:28388826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to sulfur starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to sulfur starvation","type":"related"},{"name":"decreased RNA level during cellular response to sulfur depletion","type":"exact"},{"name":"decreased RNA level during cellular response to sulfur deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to sulfur starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to sulfur starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to sulphur starvation","type":"exact"},{"name":"decreased RNA level during sulfur starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to sulfur starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to sulfur starvation","type":"exact"},{"name":"reduced RNA level during cellular response to sulfur starvation","type":"exact"}],"termid":"FYPO:0007084"}


id: RO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinates","termid":"RO:0002455"}


id: GO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by formation of an ester or amide with decanoic acid.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lipidation","termid":"GO:0006497"},{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"protein decanoylation","synonyms":[{"name":"protein amino acid decanoylation","type":"exact"}],"termid":"GO:0051366"}


id: PBO:0034503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_vacuolar_membrane","termid":"PBO:0034503"}


id: PBO:0084040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored protein involved in efficient glucose uptake; possible role in apical bud growth; GPI-anchoring on the plasma membrane crucial to function; phosphorylated in mitochondria; similar to Sps2p; ECM33 has a paralog, PST1, that arose from the whole genome duplication","termid":"PBO:0084040"}


id: GO:0099072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the the local concentration of neurotransmitter receptor at the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"}


id: GO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol phosphatase activity (obsolete GO:0004437)","synonyms":[{"name":"inositol or phosphatidylinositol phosphatase activity","type":"exact"},{"name":"inositol/phosphatidylinositol phosphatase activity","type":"exact"}],"termid":"GO:0004437"}


id: GO:0005543
data:
  {"annotated_genes":["SJAG_03851","SJAG_00152","SJAG_04275","SJAG_04010","SJAG_02177","SJAG_00368","SJAG_01564","SJAG_01143","SJAG_03405","SJAG_00173","SJAG_01519","SJAG_02492","SJAG_03756","SJAG_03563","SJAG_04077","SJAG_02657","SJAG_04221","SJAG_01783","SJAG_02728","SJAG_00118","SJAG_02902","SJAG_02912","SJAG_02248","SJAG_00946","SJAG_00314","SJAG_00907","SJAG_02414","SJAG_04600","SJAG_02392","SJAG_01863","SJAG_01748","SJAG_00115","SJAG_03250","SJAG_04417","SJAG_01382","SJAG_03593","SJAG_01722","SJAG_02166","SJAG_00268","SJAG_01229","SJAG_04644","SJAG_01437","SJAG_03847","SJAG_02468","SJAG_00971","SJAG_02572","SJAG_16459","SJAG_02274","SJAG_00216","SJAG_00638","SJAG_01324","SJAG_01945","SJAG_02852","SJAG_01135","SJAG_01794","SJAG_05245","SJAG_01309","SJAG_03970","SJAG_03596","SJAG_02989","SJAG_02587","SJAG_04960","SJAG_04413","SJAG_04001","SJAG_00467","SJAG_00970","SJAG_04024","SJAG_05179","SJAG_00117","SJAG_00663","SJAG_00821","SJAG_04963","SJAG_04219","SJAG_01516","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84207,87796,87920,88658,91049,92482,97837,98480,99315,100093,100333,101440,102761,104717,108332,114488,114663,114928,114958],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[104231,102050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005545"},{"annotations":[102233,102611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901612"},{"annotations":[102615,102235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070300"},{"annotations":[111761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031210"},{"annotations":[109672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008429"},{"annotations":[103396,115000,89546,93521,113984,113548,103658,110784,108886,104764,97768,62336,95031,99482,111215,101002,88362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035091"},{"annotations":[91924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901981"},{"annotations":[113463,84176,98477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[94667,95379,93674,96337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[108481,95752,105665,95888,96338,91999,100863,94668,97763,105814,86669,93675,106013,104677,95887,87582,111235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[84108,86839,97970,102051,97819,95342,97809,102616,110896,114956,113047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[90578,96171,94775,95343,98478,108521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"},{"annotations":[84109,98479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid 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binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0005543","terms_by_termid":{"GO:0001786":null,"GO:0005543":null,"GO:0005545":null,"GO:0005546":null,"GO:0005547":null,"GO:0008429":null,"GO:0031210":null,"GO:0032266":null,"GO:0035091":null,"GO:0070273":null,"GO:0070300":null,"GO:0080025":null,"GO:1901612":null,"GO:1901981":null}}


id: PBO:0035903
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylation_during_vegetative_growth","termid":"PBO:0035903"}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: GO:0050097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: threo-3-methyl-L-aspartate = L-glutamate.","definition_xrefs":["EC:5.4.99.1","RHEA:12857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"methylaspartate mutase activity","secondary_identifiers":["KEGG_REACTION:R00262","MetaCyc:METHYLASPARTATE-MUTASE-RXN"],"synonyms":[{"name":"L-threo-3-methylaspartate carboxy-aminomethylmutase activity","type":"related"},{"name":"b-methylaspartate-glutamate mutase activity","type":"related"},{"name":"beta-methylaspartate-glutamate mutase activity","type":"related"},{"name":"glutamate isomerase activity","type":"related"},{"name":"glutamate mutase activity","type":"related"},{"name":"glutamic acid isomerase activity","type":"related"},{"name":"glutamic acid mutase activity","type":"related"},{"name":"glutamic isomerase activity","type":"related"},{"name":"glutamic mutase activity","type":"related"},{"name":"methylaspartic acid mutase activity","type":"related"}],"termid":"GO:0050097"}


id: MOD:00193
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-oxoalanine.","definition_xrefs":["Unimod:402#C","RESID:AA0185#CYS","PubMed:8681943","PubMed:14563551","PubMed:7628016","DeltaMass:350","PubMed:9478923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Cys)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Cys)","type":"exact"},{"name":"Oxala(Cys)","type":"exact"}],"termid":"MOD:00193"}


id: FYPO:0001433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of decamethylenediguanidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to decamethylenediguanidine","synonyms":[{"name":"resistance to Anticoman","type":"exact"},{"name":"resistance to decamethylenediguanidine during mitotic cell cycle","type":"related"},{"name":"resistance to decamethylenediguanidine during vegetative growth","type":"exact"},{"name":"resistant to decamethylenediguanidine","type":"exact"}],"termid":"FYPO:0001433"}


id: PBO:0049063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 78","termid":"PBO:0049063"}


id: FYPO:0001200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to calcium starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to calcium starvation","synonyms":[{"name":"abnormal cellular response to calcium depletion","type":"exact"},{"name":"abnormal cellular response to calcium deprivation","type":"exact"},{"name":"abnormal cellular response to calcium ion starvation","type":"exact"},{"name":"abnormal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001200"}


id: PBO:0090530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit E","termid":"PBO:0090530"}


id: PBO:0091691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crazy cell surface glycoprotein","termid":"PBO:0091691"}


id: PBO:0089789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk16","termid":"PBO:0089789"}


id: PBO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 12","termid":"PBO:0070742"}


id: RO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite of in which a parasite steals resources from another organism, usually food or nest material","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasite_of","termid":"RO:0008503"}


id: PBO:0084090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) and ubiquitin receptor; involved in vesicle-mediated vacuolar transport, including Golgi-endosome trafficking and sorting through the multivesicular body (MVB); stimulates the intrinsic guanine nucleotide exchange activity of Rab family members (Vps21p/Ypt52p/Ypt53p); partially redundant with GEF MUK1; required for localization of the CORVET complex to endosomes; similar to mammalian ras inhibitors; contains a Ub-interacting CUE domain","termid":"PBO:0084090"}


id: PBO:0066765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 63","termid":"PBO:0066765"}


id: PBO:0039313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 7","termid":"PBO:0039313"}


id: GO:0140021
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106915],"is_not":false,"summary":null,"term":"GO:0140021"}]},"cv_name":"biological_process","definition":"The process in which ADP is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:2541251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP transport","termid":"GO:0015866"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"mitochondrial ADP transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140021","terms_by_termid":{"GO:0140021":null}}


id: PATO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001105 absolute strain value (obsolete PATO:0001105)","termid":"PATO:0001105"}


id: PBO:0066944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 246","termid":"PBO:0066944"}


id: GO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus during osmolarity sensing.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in osmosensory signaling pathway (obsolete GO:0000208)","synonyms":[{"name":"MAPK import into nucleus during osmolarity sensing","type":"exact"},{"name":"MAPK import into nucleus involved in osmosensory signalling pathway","type":"exact"},{"name":"nuclear translocation of MAPK during osmolarity sensing","type":"exact"},{"name":"nuclear translocation of MAPK involved in osmosensory signaling pathway","type":"narrow"},{"name":"nuclear translocation of MAPK involved in osmosensory signalling pathway","type":"narrow"},{"name":"osmolarity sensing, MAPK import into nucleus","type":"exact"},{"name":"osmolarity sensing, nuclear translocation of MAPK","type":"narrow"}],"termid":"GO:0000208"}


id: PBO:0051672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING2 divergent transcript","termid":"PBO:0051672"}


id: GO:0015879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino-acid betaine transport","termid":"GO:0015838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"carnitine transport","synonyms":[{"name":"vitamin Bt transport","type":"exact"}],"termid":"GO:0015879"}


id: PBO:0052611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRBOX1 antisense RNA 1","termid":"PBO:0052611"}


id: SO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide binding motif is a short (up to 20 amino acids) polypeptide region of biological interest that contains one or more amino acids experimentally shown to bind to a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_binding_motif","synonyms":[{"name":"binding","type":"related"},{"name":"polypeptide binding motif","type":"exact"}],"termid":"SO:0100018"}


id: PR:Q9UUE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03164","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.05","secondary_identifiers":["UniProtKB:Q9UUE4"],"synonyms":[{"name":"PPIase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL4","type":"exact"},{"name":"rotamase cyp6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE4"}


id: PR:O14034
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.13 gene.","definition_xrefs":["UniProtKB:O14034","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lyase C29B12.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.13","synonyms":[{"name":"Spom972h-SPAC29B12.13","type":"exact"}],"termid":"PR:O14034"}


id: PBO:0063284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 10","termid":"PBO:0063284"}


id: PBO:0058469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5571","termid":"PBO:0058469"}


id: GO:0071066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of wind in which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:mah","PMID:19279637","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of wind","termid":"GO:0071063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of wind","synonyms":[{"name":"detection of mechanical stimulus involved in sensory perception of air flow","type":"exact"},{"name":"detection of wind","type":"exact"},{"name":"perception of wind, detection of mechanical stimulus","type":"exact"},{"name":"perception of wind, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of wind, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of wind","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of wind","type":"exact"},{"name":"sensory transduction of wind","type":"exact"}],"termid":"GO:0071066"}


id: PBO:0085667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0085667"}


id: GO:0106405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the dephosphorylation of isoprenoid diphosphates.","definition_xrefs":["PMID:33246356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoprenoid diphosphate phosphatase activity","termid":"GO:0106405"}


id: GO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L(or D)-ribulose = ADP + L(or D)-ribulose 5-phosphate.","definition_xrefs":["EC:2.7.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribulokinase activity","secondary_identifiers":["MetaCyc:RIBULOKIN-RXN","RHEA:22072"],"synonyms":[{"name":"ATP:L(or D)-ribulose 5-phosphotransferase activity","type":"related"},{"name":"L-ribulokinase activity","type":"exact"},{"name":"ribulokinase (phosphorylating)","type":"related"}],"termid":"GO:0008741"}


id: PBO:0048340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 51","termid":"PBO:0048340"}


id: PBO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member C","termid":"PBO:0047243"}


id: PBO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavonol reductase/cinnamoyl-CoA reductase family","termid":"PBO:0001801"}


id: GO:0032041
data:
  {"annotated_genes":["SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86152],"is_not":false,"summary":null,"term":"GO:0032041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 14) + H2O = histone H3 L-lysine (position 14) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 14 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent histone deacetylase activity","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K14 deacetylase activity","termid":"GO:0031078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0033558","GO:0140096","GO:0019213","GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"NAD-dependent histone H3K14 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K14 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0032041","terms_by_termid":{"GO:0032041":null}}


id: GO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, alternative pathway in another organism (obsolete GO:0044633)","synonyms":[{"name":"modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"regulation of complement activation, alternative pathway in other organism","type":"related"}],"termid":"GO:0044633"}


id: GO:0048400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"positively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"activation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of intermediate mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"upregulation of intermediate mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048400"}


id: PBO:0059221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 3, pseudogene","termid":"PBO:0059221"}


id: PBO:0085648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in membrane-trafficking events at plasma membrane; interacts with actin regulators Sla1p and Las17p, ubiquitin, Arf3p to couple actin dynamics to membrane trafficking processes; similar structure to GGA family of proteins with N-terminal VHS domain and GAT domain; binds Las17p, which is homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly, actin polymerization; may mediate disassembly of Pan1 complex from endocytic coat","termid":"PBO:0085648"}


id: PBO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 8 pseudogene","termid":"PBO:0062167"}


id: FYPO:0007806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33836577","GO:0140656","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal endodeoxyribonuclease activator activity","termid":"FYPO:0007806"}


id: PBO:0071739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 37","termid":"PBO:0071739"}


id: GO:0038196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type III interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:signaling","PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type III interferon","termid":"GO:0071358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type III interferon-mediated signaling pathway","synonyms":[{"name":"interferon lambda signaling pathway","type":"narrow"},{"name":"type III interferon signaling pathway","type":"exact"},{"name":"type III interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0038196"}


id: GO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of a metal ion to a molecule via a nitrogen-metal bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}


id: PBO:0044713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX11 antisense RNA 1","termid":"PBO:0044713"}


id: GO:0016895
data:
  {"annotated_genes":["SJAG_05373","SJAG_04410","SJAG_02908","SJAG_01648","SJAG_01832","SJAG_01173","SJAG_02818","SJAG_03734","SJAG_02298","SJAG_01163","SJAG_05280"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105134,101258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008296"},{"annotations":[84509,89065,93193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035312"},{"annotations":[111688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033699"},{"annotations":[105976,84665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[93196,103788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051908"},{"annotations":[84668,103381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[107610,93198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by removing nucleotide residues from the 3' or 5' end to yield 5' phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity","termid":"GO:0004529"},{"relation_name":"is_a","term_name":"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","termid":"GO:0016796"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03734":null,"SJAG_04410":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140097","GO:0004527","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA exonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.-","GO:0008858"],"synonyms":[{"name":"exodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"exonuclease VIII activity","type":"narrow"}],"termid":"GO:0016895","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null,"GO:0033699":null,"GO:0035312":null,"GO:0045145":null,"GO:0051908":null}}


id: PBO:0058537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6082","termid":"PBO:0058537"}


id: PBO:0086143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal ER membrane biosynthesis in response to ER stress; ortholog of the FIT family of proteins involved in triglyceride droplet biosynthesis; human homolog FIT2/FITM2, a fatty acyl-CoA diphosphatase, complements the yeast null mutant; disputed role in the synthesis of inositol phospholipids from inositol; required for inositol prototrophy","termid":"PBO:0086143"}


id: GO:1905217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an astaxanthin stimulus.","definition_xrefs":["PMID:22309505","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to astaxanthin","synonyms":[{"name":"response to (3S,3'S)-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione","type":"exact"}],"termid":"GO:1905217"}


id: PR:O74386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03031","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C3H7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.11","secondary_identifiers":["UniProtKB:O74386"],"synonyms":[{"name":"Spom972h-METTL6","type":"exact"}],"termid":"PR:O74386"}


id: PBO:0067928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 230","termid":"PBO:0067928"}


id: PBO:0041988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 32","termid":"PBO:0041988"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: FYPO:0003624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003624)","synonyms":[{"name":"decreased protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003624"}


id: PBO:0045944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFR3 homolog A","termid":"PBO:0045944"}


id: PBO:0063246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 11","termid":"PBO:0063246"}


id: PR:O13872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12937:SF0","OMA:SCHPO02052","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 28 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.07c","secondary_identifiers":["UniProtKB:O13872"],"synonyms":[{"name":"ESCRT-I complex subunit vps28 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-VPS28","type":"exact"}],"termid":"PR:O13872"}


id: PBO:0109385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 16","termid":"PBO:0109385"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: GO:1990785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of water immersion while being held immobile.","definition_xrefs":["PMID:10882227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water-immersion restraint stress","synonyms":[{"name":"response to immobilization stress combined with water immersion","type":"exact"}],"termid":"GO:1990785"}


id: FYPO:0003237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used (or not spliced at all) is increased.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0000294"],"is_obsolete":false,"name":"increased RNA splicing at cryptic splice sites","synonyms":[{"name":"increased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"increased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"increased RNA splicing of cryptic introns","type":"exact"}],"termid":"FYPO:0003237"}


id: PBO:0080377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS9 domain containing 1","termid":"PBO:0080377"}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: GO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a parasitic plant.","definition_xrefs":["PMID:16547862","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to parasitic plant","termid":"GO:0002241"}


id: GO:0007187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation or inhibition of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide.","definition_xrefs":["GOC:signaling","GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","synonyms":[{"name":"G protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cyclic nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via cyclic nucleotide second messenger","type":"exact"}],"termid":"GO:0007187"}


id: PBO:0045336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK9 divergent transcript","termid":"PBO:0045336"}


id: PBO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodysplasin A","termid":"PBO:0045780"}


id: GO:0120506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl79-[histone H3] + 2 S-adenosyl-L-methionine = 2H+ + N6,N6-methyl-L-lysyl79-[histone H3] + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:15371351","PMID:14732680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K79 methyltransferase activity","termid":"GO:0031151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0140096","GO:0016740","GO:0008276"],"is_obsolete":false,"name":"histone H3K79 dimethyltransferase activity","termid":"GO:0120506"}


id: PBO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron ion transmembrane transporter Mmt1 (predicted)","termid":"PBO:0018137"}


id: GO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"positive regulation of integrin biosynthetic process","termid":"GO:0045726"},{"relation_name":"positively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"activation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of beta 2 integrin anabolism","type":"exact"},{"name":"positive regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"positive regulation of beta 2 integrin formation","type":"exact"},{"name":"positive regulation of beta 2 integrin synthesis","type":"exact"},{"name":"stimulation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"up regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"up-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"upregulation of beta 2 integrin biosynthetic process","type":"exact"}],"termid":"GO:0045775"}


id: PBO:0036196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus_during_vegetative_growth","termid":"PBO:0036196"}


id: PBO:0049393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 8 (putative)","termid":"PBO:0049393"}


id: SO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variably distant linear promoter region recognized by TFIIIC, with consensus sequence AGGTTCCAnnCC.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B_box","synonyms":[{"name":"B-box","type":"exact"}],"termid":"SO:0000620"}


id: GO:0009627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The salicylic acid-mediated response to a pathogen which confers broad spectrum resistance.","definition_xrefs":["Wikipedia:Systemic_acquired_resistance","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance","synonyms":[{"name":"salicylic acid-dependent systemic resistance","type":"exact"}],"termid":"GO:0009627"}


id: PBO:0091358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, quiescence specific","termid":"PBO:0091358"}


id: PBO:0072483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 12","termid":"PBO:0072483"}


id: GO:0072233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric thick ascending limb over time, from its formation to the mature structure. The metanephric thick ascending limb is the last part of the metanephric loop of Henle. Its thick, mitochondria-rich epithelium characterizes the outer medulla, and is responsible for very avid active salt transport. At the macula densa, the thick ascending limb connects to the distal convoluted tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick ascending limb development","termid":"GO:0072023"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric thick ascending limb development","synonyms":[{"name":"metanephric TAL development","type":"exact"}],"termid":"GO:0072233"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: PBO:0083196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083196"}


id: PBO:0063493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 4","termid":"PBO:0063493"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: PBO:0072145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 22","termid":"PBO:0072145"}


id: PR:O42875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tryptophan--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10055:SF2","OMA:SCHPO01319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.13c","secondary_identifiers":["UniProtKB:O42875"],"synonyms":[{"name":"Spom972h-WARS2","type":"exact"},{"name":"TrpRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tryptophanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42875"}


id: SO:1000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000122 sequence_variant_causing_polypeptide_post_translational_processing_change (obsolete SO:1000122)","synonyms":[{"name":"mutation causing polypeptide post translational processing change","type":"related"},{"name":"polypeptide post-translational processing affected","type":"exact"},{"name":"sequence variant causing polypeptide post translational processing change","type":"exact"}],"termid":"SO:1000122"}


id: PBO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA/Iml1/Npr2/3 complex subunit Npr3 (predicted)","termid":"PBO:0018095"}


id: GO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Fe2+(out) = Fe2+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:9.A.9.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"low-affinity ferric iron ion transmembrane transporter activity","synonyms":[{"name":"low affinity iron ion transmembrane transporter activity","type":"exact"},{"name":"low affinity iron transporter activity","type":"exact"}],"termid":"GO:0015090"}


id: PBO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP+] Tyr1 (predicted)","termid":"PBO:0005831"}


id: GO:0006688
data:
  {"annotated_genes":["SJAG_03953","SJAG_02168","SJAG_04913","SJAG_05311","SJAG_04878"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91319,86825,91800,108558,87879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02168":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycosphingolipid anabolism","type":"exact"},{"name":"glycosphingolipid biosynthesis","type":"exact"},{"name":"glycosphingolipid formation","type":"exact"},{"name":"glycosphingolipid synthesis","type":"exact"}],"termid":"GO:0006688","terms_by_termid":{"GO:0051999":null}}


id: PBO:0062916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 7","termid":"PBO:0062916"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0090980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9","termid":"PBO:0090980"}


id: PBO:0081374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 213","termid":"PBO:0081374"}


id: GO:0031752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D5 dopamine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"D5 dopamine receptor binding","synonyms":[{"name":"D1B dopamine receptor binding","type":"exact"},{"name":"D5 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031752"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_01993","SJAG_03086","SJAG_02245","SJAG_02700","SJAG_02566","SJAG_00521","SJAG_04982","SJAG_00279","SJAG_04479","SJAG_04100","SJAG_01894","SJAG_00677","SJAG_01268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64196,88396,89892,93788,94887],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[88397,84372,110335,94948],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[97799,85928,98786,101193,86767],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93791,110338],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0065003","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0031560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_catalytic_activity","termid":"PBO:0031560"}


id: GO:0060751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth process in which a branch of a mammary gland duct elongates.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branch elongation involved in mammary gland duct branching","synonyms":[{"name":"mammary gland duct branch elongation","type":"exact"}],"termid":"GO:0060751"}


id: PBO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Jac1 (predicted)","termid":"PBO:0002624"}


id: PBO:0108907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 1","termid":"PBO:0108907"}


id: RO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input.\\nT innervates some R\\nExpands_to: T has_fasciculating_neuron_projection that synapse_in some R.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervates","termid":"RO:0002134"}


id: PBO:0056114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLAL1 antisense RNA 1","termid":"PBO:0056114"}


id: PBO:0076082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin","termid":"PBO:0076082"}


id: PR:000036302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2/mitotic-specific cyclin cdc13 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2/mitotic-specific cyclin cdc13","termid":"PR:000037485"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/mitotic-specific cyclin cdc13 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC582.03","synonyms":[{"name":"SPBC582.03","type":"related"},{"name":"Spom-cdc13","type":"exact"}],"termid":"PR:000036302"}


id: PBO:0091309
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starvation induced ArresT","termid":"PBO:0091309"}


id: GO:0001882
data:
  {"annotated_genes":["SJAG_00637","SJAG_04030","SJAG_03578","SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"},{"annotations":[94221,90168,109165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032549"}]},"cv_name":"molecular_function","definition":"Binding to a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001882","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: GO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"positively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development","termid":"GO:0061063"}


id: PBO:0089777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase family protein","termid":"PBO:0089777"}


id: GO:0018991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive behavior that results in the deposition of eggs (either fertilized or not) upon a surface or into a medium such as water.","definition_xrefs":["PMID:31164023","PMID:18050396","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive behavior","termid":"GO:0019098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg-laying behavior","secondary_identifiers":["Wikipedia:Oviposition","GO:0060403"],"synonyms":[{"name":"egg laying","type":"broad"},{"name":"egg-laying","type":"broad"},{"name":"oviposition","type":"exact"},{"name":"post-mating oviposition","type":"narrow"}],"termid":"GO:0018991"}


id: GO:0015660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of formate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formate transmembrane transporter activity","termid":"GO:0015499"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"formate efflux transmembrane transporter activity","secondary_identifiers":["GO:0015509"],"synonyms":[{"name":"formate efflux permease activity","type":"related"}],"termid":"GO:0015660"}


id: PR:Q10178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12097:SF0","PRO:DNx","OMA:SCHPO01797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.09c","secondary_identifiers":["UniProtKB:Q10178"],"synonyms":[{"name":"Spom972h-SF3B1","type":"exact"}],"termid":"PR:Q10178"}


id: GO:0035135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic anal fin morphogenesis","termid":"GO:0035135"}


id: GO:1900445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"}],"termid":"GO:1900445"}


id: PBO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_induce","termid":"PBO:0034177"}


id: GO:1905914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:22362515","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"is_a","term_name":"regulation of calcium ion export across plasma membrane","termid":"GO:1905912"},{"relation_name":"positively_regulates","term_name":"calcium ion export across plasma membrane","termid":"GO:1990034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion export across plasma membrane","synonyms":[{"name":"activation of calcium ion efflux from cell","type":"narrow"},{"name":"activation of calcium ion export from cell","type":"narrow"},{"name":"positive regulation of calcium ion efflux from cell","type":"exact"},{"name":"positive regulation of calcium ion export from cell","type":"exact"},{"name":"up regulation of calcium ion efflux from cell","type":"exact"},{"name":"up regulation of calcium ion export from cell","type":"exact"},{"name":"up-regulation of calcium ion efflux from cell","type":"exact"},{"name":"up-regulation of calcium ion export from cell","type":"exact"},{"name":"upregulation of calcium ion efflux from cell","type":"exact"},{"name":"upregulation of calcium ion export from cell","type":"exact"}],"termid":"GO:1905914"}


id: PBO:0003561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex subunit (predicted)","termid":"PBO:0003561"}


id: PBO:0068506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 95, pseudogene","termid":"PBO:0068506"}


id: PATO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000478 poor value (obsolete PATO:0000478)","termid":"PATO:0000478"}


id: PBO:0052534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 7","termid":"PBO:0052534"}


id: MOD:00759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"fucosylated biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-1 galactose)","type":"related"},{"name":"dHex(1)Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00759"}


id: PBO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ISCA1 orholog","termid":"PBO:0010081"}


id: PBO:0059655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 21","termid":"PBO:0059655"}


id: PBO:0077531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 244","termid":"PBO:0077531"}


id: PBO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.41","termid":"PBO:0004493"}


id: PBO:0065731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3A, DNA repair factor","termid":"PBO:0065731"}


id: PBO:0034521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomeric_DNA_separation","termid":"PBO:0034521"}


id: GO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete viral transmission by vector (obsolete GO:0044009)","termid":"GO:0044009"}


id: PBO:0041999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 50","termid":"PBO:0041999"}


id: GO:0014848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary tract. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary tract consists of organs of the body that produce and discharge urine. These include the kidneys, ureters, bladder, and urethra.","definition_xrefs":["GOC:mtg_muscle","MA:0000325","MSH:D014551","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}


id: PBO:0044805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104B","termid":"PBO:0044805"}


id: GO:0033086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"negatively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of extrathymic T cell differentiation","synonyms":[{"name":"negative regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033086"}


id: PBO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A4","termid":"PBO:0013817"}


id: PBO:0041240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 105","termid":"PBO:0041240"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: PBO:0041188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-transducin repeat containing E3 ubiquitin protein ligase","termid":"PBO:0041188"}


id: PBO:0064568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP5 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064568"}


id: GO:0102259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1,2-diacyl-sn-glycerol = a monoglyceride + a fatty acid.","definition_xrefs":["GOC:pz","PMID:1477884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-diacylglycerol acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12434"],"termid":"GO:0102259"}


id: PBO:0027326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_surface_pyruvylated_galactose_level","termid":"PBO:0027326"}


id: GO:0031504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the peptidoglycan-based cell wall.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-based cell wall organization","synonyms":[{"name":"peptidoglycan-based cell wall organisation","type":"exact"},{"name":"peptidoglycan-based cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031504"}


id: GO:1903153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any ferrous iron transmembrane transporter activity that is involved in ferrous iron import into cell.","definition_xrefs":["GOC:dos","GOC:TermGenie","GO_REF:0000061","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete ferrous iron transmembrane transporter activity involved in ferrous iron import into cell (obsolete GO:1903153)","synonyms":[{"name":"ferrous iron transmembrane transporter activity involved in ferrous ion import into cell","type":"exact"},{"name":"ferrous iron transmembrane transporter activity involved in ferrous iron import into cell","type":"exact"}],"termid":"GO:1903153"}


id: PBO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 16","termid":"PBO:0060115"}


id: GO:0047506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dAMP = ADP + dADP.","definition_xrefs":["EC:2.7.4.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"(deoxy)adenylate kinase activity","secondary_identifiers":["RHEA:23100","MetaCyc:DEOXYADENYLATE-KINASE-RXN"],"synonyms":[{"name":"ATP:(d)AMP phosphotransferase activity","type":"related"}],"termid":"GO:0047506"}


id: PBO:0048124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 5","termid":"PBO:0048124"}


id: PBO:0029666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0029666"}


id: PBO:0015693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Dis2","termid":"PBO:0015693"}


id: GO:0140525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pole of the kinetoplast associated with kinetoplast DNA replication. The antipodal sites flank the kinetoplast DNA disk and are positioned approximately 180 degrees apart. In Trypanosoma brucei and Crithidia fasciculata, minicircles are attached at antipodal sites and they contain enzymes that catalyse some of the later reactions in minicircle replication.","definition_xrefs":["PMID:8045928","PMID:12455998","PMID:17462016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast","termid":"GO:0020023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"antipodal site","synonyms":[{"name":"antipodal zone","type":"exact"}],"termid":"GO:0140525"}


id: PBO:0052897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-8","termid":"PBO:0052897"}


id: GO:1901195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation preinitiation complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation preinitiation complex","termid":"GO:1901193"},{"relation_name":"positively_regulates","term_name":"formation of translation preinitiation complex","termid":"GO:0001731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0002181","GO:0065003","GO:0010467"],"is_obsolete":false,"name":"positive regulation of formation of translation preinitiation complex","synonyms":[{"name":"activation of formation of translation pre-initiation complex","type":"exact"},{"name":"activation of formation of translation preinitiation complex","type":"narrow"},{"name":"activation of translation preinitiation complex assembly","type":"exact"},{"name":"positive regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"positive regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up regulation of translation preinitiation complex assembly","type":"exact"},{"name":"up-regulation of formation of translation pre-initiation complex","type":"exact"},{"name":"up-regulation of formation of translation preinitiation complex","type":"exact"},{"name":"up-regulation of translation preinitiation complex assembly","type":"exact"},{"name":"upregulation of formation of translation pre-initiation complex","type":"exact"},{"name":"upregulation of formation of translation preinitiation complex","type":"exact"},{"name":"upregulation of translation preinitiation complex assembly","type":"exact"}],"termid":"GO:1901195"}


id: PR:O94269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.21","synonyms":[{"name":"Spom972h-ubp3","type":"exact"},{"name":"deubiquitinating enzyme 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94269"}


id: PBO:0049404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1C","termid":"PBO:0049404"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.19","RHEA:14909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["MetaCyc:GLUCURONATE-REDUCTASE-RXN","Reactome:R-HSA-5661256","KEGG_REACTION:R01481"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: MOD:00997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclohexyl ester","synonyms":[{"name":"OcHex","type":"exact"}],"termid":"MOD:00997"}


id: GO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein ubiquitination","termid":"GO:0031396"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: PBO:0049455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1","termid":"PBO:0049455"}


id: SO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000972 RNA_replication_mode (obsolete SO:0000972)","synonyms":[{"name":"RNA replication mode","type":"exact"}],"termid":"SO:0000972"}


id: GO:0031595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome found in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear lumen","termid":"GO:0031981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear proteasome complex","termid":"GO:0031595"}


id: PATO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A optical quality inhering in a bearer by virtue of the bearer's lacking opacity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opacity","termid":"PATO:0000957"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transparent","synonyms":[{"name":"clear","type":"exact"}],"termid":"PATO:0000964"}


id: GO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of development of symbiont on or near host surface (obsolete GO:0044141)","termid":"GO:0044141"}


id: GO:0061869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"}


id: GO:0009813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["GOC:tair_curators","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY1F-FLAVSYN","Wikipedia:Flavonoid"],"synonyms":[{"name":"flavonoid anabolism","type":"exact"},{"name":"flavonoid biosynthesis","type":"exact"},{"name":"flavonoid formation","type":"exact"},{"name":"flavonoid synthesis","type":"exact"}],"termid":"GO:0009813"}


id: PBO:0079486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 2","termid":"PBO:0079486"}


id: PBO:0108891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 4","termid":"PBO:0108891"}


id: GO:0072533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on tricoumaroyl spermidine or any of its mono- or dicaffeoyl spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tri-(coumaroyl or caffeoyl) spermidine meta-hydroxylase activity","termid":"GO:0072533"}


id: GO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by DNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL3 is the primary Dicer to detect DNA viruses.","definition_xrefs":["PMID:17693253","PMID:15165191","PMID:23151511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against DNA virus","synonyms":[{"name":"DNA VIGS","type":"exact"},{"name":"DNA virus induced gene silencing","type":"exact"},{"name":"DNA virus-induced PTGS","type":"exact"},{"name":"DNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051215"}


id: GO:0031625
data:
  {"annotated_genes":["SJAG_02591","SJAG_04573","SJAG_03575","SJAG_01134","SJAG_00615","SJAG_00452","SJAG_03643","SJAG_00803","SJAG_02253","SJAG_01540","SJAG_01365","SJAG_01226","SJAG_04335","SJAG_01686"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66258,69373,70825,71641,72303,73835,74616,75863,77315,77868,77997,78246,78530,79217],"is_not":false,"summary":null,"term":"GO:0031625"}]},"cv_name":"molecular_function","definition":"Binding to a ubiquitin protein ligase enzyme, any of the E3 proteins.","definition_xrefs":["GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase binding","termid":"GO:0044389"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_00803":null,"SJAG_01134":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_01540":null,"SJAG_01686":null,"SJAG_02253":null,"SJAG_02591":null,"SJAG_03575":null,"SJAG_03643":null,"SJAG_04335":null,"SJAG_04573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin protein ligase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"ubiquitin ligase binding","type":"exact"}],"termid":"GO:0031625","terms_by_termid":{"GO:0031625":null}}


id: PBO:0028584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_stationary_phase","termid":"PBO:0028584"}


id: PBO:0001950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi3 (predicted)","termid":"PBO:0001950"}


id: GO:0006767
data:
  {"annotated_genes":["SJAG_01935","SJAG_00707","SJAG_02360","SJAG_00106","SJAG_00252","SJAG_01881","SJAG_01126","SJAG_00691","SJAG_03679","SJAG_02406","SJAG_00815","SJAG_04481","SJAG_00043","SJAG_01054","SJAG_00827","SJAG_03362","SJAG_02408","SJAG_02225","SJAG_00673","SJAG_03632","SJAG_00283","SJAG_01383","SJAG_00491","SJAG_04866","SJAG_04067","SJAG_01425","SJAG_02047","SJAG_01742","SJAG_01543","SJAG_01139","SJAG_02491","SJAG_05230","SJAG_00376","SJAG_02421","SJAG_04845","SJAG_00381","SJAG_03275","SJAG_04282","SJAG_03538","SJAG_04711","SJAG_05200","SJAG_01198","SJAG_02420","SJAG_01970","SJAG_00480","SJAG_04156"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[113057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[110117,75120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[108436,100819,102105,109698,100967,104368,86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[110075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[96662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[94791,84999,98799,109392,94795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[85141,109703],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95738,111700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96923,110407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63433,83839,91562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[83841,91563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[88890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[111734,102803,113173,102999,97196,110787,106395,83587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[103402,110028,112031,95572,109609,90361,109615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[109616,110029,109610,90362,112032,95573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[65404,95574,58767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[106468,106469,95575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[96924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[95074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a diverse group of vitamins that are soluble in water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin metabolic 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vitamin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"water-soluble vitamin metabolism","type":"exact"}],"termid":"GO:0006767","terms_by_termid":{"GO:0006769":null,"GO:0006772":null,"GO:0008614":null,"GO:0008615":null,"GO:0009102":null,"GO:0009228":null,"GO:0009229":null,"GO:0009231":null,"GO:0009443":null,"GO:0010144":null,"GO:0015940":null,"GO:0036001":null,"GO:0036172":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0046655":null,"GO:0046656":null,"GO:0090180":null,"GO:1990181":null}}


id: FYPO:0005433
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination at one or more recombination hotspots is decreased to the background level. The basal rate of recombination (i.e. away from hotspots) may remain normal or may be decreased.","definition_xrefs":["PMID:12019258","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic recombination at hotspot","synonyms":[{"name":"decreased meiotic recombination at recombination hotspot","type":"exact"},{"name":"hotspot-specific decreased meiotic recombination","type":"exact"},{"name":"reduced meiotic recombination at hotspot","type":"exact"}],"termid":"FYPO:0005433"}


id: PATO:0001795
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coiling which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coiled","termid":"PATO:0000404"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coiling","synonyms":[{"name":"high coiling","type":"exact"}],"termid":"PATO:0001795"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: PBO:0063210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP3 antisense RNA 1","termid":"PBO:0063210"}


id: GO:0060427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of lung connective tissue from an initial condition to its mature state. This process begins with the formation of lung connective tissue and ends with the mature structure. The lung connective tissue is a material made up of fibers forming a framework and support structure for the lungs.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung connective tissue development","synonyms":[{"name":"pulmonary connective tissue development","type":"exact"}],"termid":"GO:0060427"}


id: PBO:0084196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H4; core histone protein required for chromatin assembly and chromosome function; one of two identical histone proteins (see also HHF1); contributes to telomeric silencing; N-terminal domain involved in maintaining genomic integrity","termid":"PBO:0084196"}


id: PBO:0047423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 12","termid":"PBO:0047423"}


id: PBO:0046959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member A","termid":"PBO:0046959"}


id: PBO:0072482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 11","termid":"PBO:0072482"}


id: PBO:0051815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 1","termid":"PBO:0051815"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: GO:0032941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"secretion by tissue","synonyms":[{"name":"expulsion of gland contents","type":"related"},{"name":"tissue secretion","type":"exact"}],"termid":"GO:0032941"}


id: GO:1905652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","GOC:TermGenie","PMID:27389411","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of artery morphogenesis","termid":"GO:1905651"},{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"},{"relation_name":"negatively_regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery morphogenesis","synonyms":[{"name":"down regulation of arterial morphogenesis","type":"exact"},{"name":"down regulation of arteriogenesis","type":"exact"},{"name":"down regulation of artery morphogenesis","type":"exact"},{"name":"down-regulation of arterial morphogenesis","type":"exact"},{"name":"down-regulation of arteriogenesis","type":"exact"},{"name":"down-regulation of artery morphogenesis","type":"exact"},{"name":"downregulation of arterial morphogenesis","type":"exact"},{"name":"downregulation of arteriogenesis","type":"exact"},{"name":"downregulation of artery morphogenesis","type":"exact"},{"name":"inhibition of arterial morphogenesis","type":"narrow"},{"name":"inhibition of arteriogenesis","type":"narrow"},{"name":"inhibition of artery morphogenesis","type":"narrow"},{"name":"negative regulation of arterial morphogenesis","type":"exact"},{"name":"negative regulation of arteriogenesis","type":"exact"}],"termid":"GO:1905652"}


id: PBO:0089820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A (predicted)tt","termid":"PBO:0089820"}


id: PBO:0090509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase delta subunit Swp1","termid":"PBO:0090509"}


id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: PBO:0055507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2941","termid":"PBO:0055507"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: GO:1905432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde trans-synaptic signaling by neuropeptide.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:19448629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of trans-synaptic signaling","termid":"GO:0099177"},{"relation_name":"regulates","term_name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retrograde trans-synaptic signaling by neuropeptide","synonyms":[{"name":"regulation of neuropeptide-mediated retrograde trans-synaptic signaling","type":"related"}],"termid":"GO:1905432"}


id: GO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.","definition_xrefs":["PMID:15134857","PMID:11027914","Wikipedia:Peptide_hormone"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptide hormone","synonyms":[{"name":"response to peptide hormone stimulus","type":"exact"},{"name":"response to polypeptide hormone stimulus","type":"exact"}],"termid":"GO:0043434"}


id: GO:0048285
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id: GO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine.","definition_xrefs":["EC:2.4.1.62","MetaCyc:GANGLIOSIDE-GALACTOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ganglioside galactosyltransferase activity","secondary_identifiers":["RHEA:16773"],"synonyms":[{"name":"GM1-synthase activity","type":"related"},{"name":"UDP galactose-LAC Tet-ceramide alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 galactosyltransferase activity","type":"related"},{"name":"UDP-galactose-GM2 ganglioside galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetylgalactosaminyl-(N-acetylneuraminyl) galactosyl-glucosyl-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-ceramide galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine beta-1,3-D-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphate D-galactose:glycolipid galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-GM2 galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-ceramide galactosyltransferase activity","type":"related"}],"termid":"GO:0047915"}


id: PBO:0062017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 8","termid":"PBO:0062017"}


id: GO:0035042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replacement of sperm-specific chromosomal proteins with somatic histones, to allow the paternal genome to acquire a nucleosomal chromatin organization compatible with nuclear activity.","definition_xrefs":["GOC:bf","PMID:11735001"],"gene_count":0,"genotype_count":0,"name":"obsolete fertilization, exchange of chromosomal proteins (obsolete GO:0035042)","synonyms":[{"name":"sperm-specific histone exchange","type":"exact"},{"name":"sperm-specific histone replacement","type":"exact"}],"termid":"GO:0035042"}


id: GO:0000511
data:
  {"annotated_genes":["SJAG_02035","SJAG_03128","SJAG_00942","SJAG_02416","SJAG_02314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94214,104129,107296,107297,109628,109629,112919],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140597"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: FYPO:0003017
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to salt stress (obsolete FYPO:0003017)","synonyms":[{"name":"elongated inviable cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to salt stress","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003017"}


id: GO:0045871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of rhodopsin gene expression.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of rhodopsin gene expression (obsolete GO:0045871)","synonyms":[{"name":"down regulation of rhodopsin gene activity","type":"exact"},{"name":"down-regulation of rhodopsin gene activity","type":"exact"},{"name":"downregulation of rhodopsin gene activity","type":"exact"},{"name":"inhibition of rhodopsin gene activity","type":"narrow"},{"name":"negative regulation of rhodopsin gene activity","type":"exact"}],"termid":"GO:0045871"}


id: GO:0050234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + pyrazole = 3-(pyrazol-1-yl)-L-alanine + H2O.","definition_xrefs":["RHEA:24512","EC:4.2.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyrazolylalanine synthase activity","secondary_identifiers":["MetaCyc:PYRAZOLYLALANINE-SYNTHASE-RXN","KEGG_REACTION:R02378"],"synonyms":[{"name":"L-serine hydro-lyase (adding pyrazole)","type":"related"},{"name":"L-serine hydro-lyase [adding pyrazole; 3-(pyrazol-1-yl)-L-alanine-forming]","type":"related"},{"name":"beta-pyrazolylalaninase activity","type":"related"}],"termid":"GO:0050234"}


id: PBO:0080918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 7","termid":"PBO:0080918"}


id: PBO:0036029
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heat","termid":"PBO:0036029"}


id: GO:0062055
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: PBO:0034039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component","termid":"PBO:0034039"}


id: GO:0035337
data:
  {"annotated_genes":["SJAG_04007","SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[109439,101625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA metabolic process","type":"exact"},{"name":"fatty-acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035337","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: GO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + myo-inositol = 1L-1-O-(indol-3-yl)acetyl-myo-inositol + D-glucose.","definition_xrefs":["RHEA:21180","EC:2.3.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"indoleacetylglucose-inositol O-acyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.72-RXN","KEGG_REACTION:R04333"],"synonyms":[{"name":"1-O-(indol-3-yl)acetyl-beta-D-glucose:myo-inositol (indol-3-yl)acetyltransferase activity","type":"related"},{"name":"1-O-(indol-3-ylacetyl)-beta-D-glucose:myo-inositol indole-3-ylacetyltransferase activity","type":"related"},{"name":"indole-3-acetyl-beta-1-D-glucoside:myo-inositol indoleacetyltransferase activity","type":"related"}],"termid":"GO:0047194"}


id: GO:0102490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 8-oxo-dGTP + 2 H2O = 8-oxo-dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 8-oxo-dGTP phosphohydrolase activity (obsolete GO:0102490)","termid":"GO:0102490"}


id: GO:2000610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid hormone generation","termid":"GO:2000610"}


id: GO:0102733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: typhasterol + O2 + a reduced electron acceptor = castasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:17138693","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"typhasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-719"],"termid":"GO:0102733"}


id: PBO:0027528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027528"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: GO:0036371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the T-tubule. The T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril.","definition_xrefs":["GOC:BHF","PMID:16292983","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to T-tubule","synonyms":[{"name":"protein localisation to T-tubule","type":"exact"},{"name":"protein localization to T tubule","type":"exact"},{"name":"protein localization to transverse tubule","type":"exact"}],"termid":"GO:0036371"}


id: PR:Q04800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH oxidase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric reductase transmembrane component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.09c","secondary_identifiers":["UniProtKB:Q04800"],"synonyms":[{"name":"Spom972h-NOX1","type":"exact"},{"name":"ferric-chelate reductase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q04800"}


id: MOD:01369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl methyl ester group.","definition_xrefs":["Unimod:528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"deamidated and methyl esterified residue","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01369"}


id: PBO:0058097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4313","termid":"PBO:0058097"}


id: GO:1901827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zeaxanthin.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY-5944","GOC:yaf","UniPathway:UPA00843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"zeaxanthin metabolic process","termid":"GO:1901825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zeaxanthin biosynthetic process","synonyms":[{"name":"zeaxanthin anabolism","type":"exact"},{"name":"zeaxanthin biosynthesis","type":"exact"},{"name":"zeaxanthin formation","type":"exact"},{"name":"zeaxanthin synthesis","type":"exact"}],"termid":"GO:1901827"}


id: GO:1900404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of DNA repair.","definition_xrefs":["GOC:TermGenie","GOC:mah","PMID:20299455"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900404)","synonyms":[{"name":"activation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900404"}


id: GO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with mRNP particles and RNA polymerase II and is proposed to integrate transcript elongation with the regulation of alternative splicing. In humans it is composed of the proteins KIAA1967/DBC1 and ZNF326/ZIRD.","definition_xrefs":["GOC:sp","PMID:22446626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DBIRD complex","termid":"GO:0044609"}


id: GO:0160176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of magnesium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["PMID:38513662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"magnesium ion transmembrane transport","termid":"GO:1903830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"magnesium ion transport from cytosol to endoplasmic reticulum","termid":"GO:0160176"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: FYPO:0007818
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:34147496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein ubiquitination during nitrogen starvation","synonyms":[{"name":"decreased protein ubiquitination during nitrogen depletion","type":"exact"},{"name":"decreased protein ubiquitination during nitrogen deprivation","type":"exact"},{"name":"decreased protein ubiquitinylation during nitrogen starvation","type":"exact"},{"name":"decreased protein ubiquitylation during nitrogen starvation","type":"exact"},{"name":"reduced protein ubiquitination during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007818"}


id: FYPO:0002841
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abolished protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"protein localization to chromosome abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002841","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:dph","PMID:11445442","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"growth hormone receptor signaling pathway","synonyms":[{"name":"GH receptor signaling pathway","type":"related"},{"name":"cellular response to growth hormone","type":"related"},{"name":"growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060396"}


id: PBO:0072743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7A","termid":"PBO:0072743"}


id: GO:1902243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of copal-8-ol diphosphate(3-).","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) biosynthetic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) anabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) biosynthesis","type":"exact"},{"name":"copal-8-ol diphosphate(3-) formation","type":"exact"},{"name":"copal-8-ol diphosphate(3-) synthesis","type":"exact"}],"termid":"GO:1902243"}


id: PBO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amitrole","termid":"PBO:0030706"}


id: GO:0033476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an a sugar or polyol through an ester bond.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indoleacetic acid ester conjugate biosynthetic process","synonyms":[{"name":"IAA ester conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid ester conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid ester conjugate anabolism","type":"exact"},{"name":"indoleacetic acid ester conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid ester conjugate formation","type":"exact"},{"name":"indoleacetic acid ester conjugate synthesis","type":"exact"}],"termid":"GO:0033476"}


id: PBO:0058759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6883","termid":"PBO:0058759"}


id: PBO:0083079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diphthamide synthetase; catalyzes the last amidation step of diphthamide biosynthesis using ammonium and ATP; evolutionarily conserved in eukaryotes; dph6 mutants exhibit diphthine accumulation and resistance to sordarin, which is indicative of defects in diphthamide formation on EF2; green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm; DPH6/YLR143W is not an essential gene","termid":"PBO:0083079"}


id: PBO:0082425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Biotin synthase; catalyzes the conversion of dethiobiotin to biotin, which is the last step of the biotin biosynthesis pathway; complements E. coli bioB mutant","termid":"PBO:0082425"}


id: PBO:0090790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly ATPase Rix7","termid":"PBO:0090790"}


id: GO:1904354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere capping.","definition_xrefs":["PMID:23959892","GOC:BHF","GOC:nc","GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomere capping","termid":"GO:1904353"},{"relation_name":"negatively_regulates","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomere capping","synonyms":[{"name":"down regulation of telomere capping","type":"exact"},{"name":"down regulation of telomere end protection","type":"exact"},{"name":"down-regulation of telomere capping","type":"exact"},{"name":"down-regulation of telomere end protection","type":"exact"},{"name":"downregulation of telomere capping","type":"exact"},{"name":"downregulation of telomere end protection","type":"exact"},{"name":"inhibition of telomere capping","type":"narrow"},{"name":"inhibition of telomere end protection","type":"narrow"},{"name":"negative regulation of telomere end protection","type":"exact"}],"termid":"GO:1904354"}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:21965528","PMID:872891","PomBase:mah","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: PBO:0039538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36B pseudogene 2","termid":"PBO:0039538"}


id: GO:0039509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host pattern recognition receptor. A pattern recognition receptor combines with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host pattern recognition receptor activity (obsolete GO:0039509)","synonyms":[{"name":"down regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"down-regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"inhibition by virus of host pattern recognition receptor activity","type":"narrow"},{"name":"negative regulation by virus of host pattern recognition receptor activity","type":"exact"},{"name":"suppression by virus of host pattern recognition receptor function","type":"exact"},{"name":"viral inhibition of host pattern recognition receptor activity","type":"narrow"}],"termid":"GO:0039509"}


id: PBO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDYL pseudogene 1","termid":"PBO:0042652"}


id: PBO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0002557"}


id: PR:O13797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.02c gene.","definition_xrefs":["UniProtKB:O13797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small glutamine-rich tetratricopeptide repeat-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.02c","synonyms":[{"name":"Spom972h-SPAC1142.02c","type":"exact"}],"termid":"PR:O13797"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: FYPO:0002971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during telophase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during telophase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during telophase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic telophase","type":"exact"},{"name":"decreased protein localization to spindle pole body during telophase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during telophase","type":"exact"}],"termid":"FYPO:0002971"}


id: GO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubulin deacetylation","termid":"GO:0090042"}


id: PBO:0110470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 263","termid":"PBO:0110470"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: GO:1990571
data:
  {"annotated_genes":["SJAG_00794","SJAG_03683","SJAG_03540","SJAG_02814","SJAG_01613","SJAG_02624","SJAG_01805","SJAG_04076","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89865,91378,95273,96433,98488,105164,111934,114129,114647],"is_not":false,"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"The process by which centromeres/kinetochores attach to and migrate along microtubules to become localized to clusters at the spindle pole body during a meiotic prometaphase I.","definition_xrefs":["PMID:10366596","PMID:9009280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"centromere clustering","termid":"GO:0098653"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic centromere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere clustering during meiosis","type":"exact"},{"name":"homologous chromosome movement towards spindle pole in meiosis I prometaphase","type":"exact"}],"termid":"GO:1990571","terms_by_termid":{"GO:1990571":null}}


id: PBO:0110415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 5","termid":"PBO:0110415"}


id: PBO:0068188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 495","termid":"PBO:0068188"}


id: PBO:0052500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 12","termid":"PBO:0052500"}


id: PR:000027571
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht2 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PMID:20929775","PMID:11242054","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.2","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"hht2","type":"exact"}],"termid":"PR:000027571"}


id: PBO:0038644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 12","termid":"PBO:0038644"}


id: GO:0060959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac neuron differentiation","termid":"GO:0060945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron development","synonyms":[{"name":"heart neuron development","type":"exact"}],"termid":"GO:0060959"}


id: PBO:0065811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating protein catalytic subunit 1","termid":"PBO:0065811"}


id: PBO:0038868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 2","termid":"PBO:0038868"}


id: PR:O74452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity protein scw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.07","synonyms":[{"name":"Spom972h-scw1","type":"exact"},{"name":"strong cell wall protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74452"}


id: GO:1905858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate proteoglycan binding.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:7683668","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate proteoglycan binding","synonyms":[{"name":"regulation of heparin proteoglycan binding","type":"related"}],"termid":"GO:1905858"}


id: PBO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impact RWD domain protein","termid":"PBO:0051644"}


id: PATO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000658 metamphetamine value (obsolete PATO:0000658)","termid":"PATO:0000658"}


id: PBO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.5","termid":"PBO:0000968"}


id: PBO:0073738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 5","termid":"PBO:0073738"}


id: PBO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-7 (non-functional)","termid":"PBO:0051360"}


id: GO:0019117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroxyfluorene + O2 = the corresponding 2-hydroxy-4-(oxo-1,3-dihydro-2H-inden-ylidene) but-2-enoic acid.","definition_xrefs":["UM-BBD_reactionID:r0422","GOC:mah","UM-BBD_reactionID:r0415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroxyfluorene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0019117"}


id: GO:0004360
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98836],"is_not":false,"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 6-phosphate + L-glutamine = D-glucosamine 6-phosphate + L-glutamate.","definition_xrefs":["EC:2.6.1.16","RHEA:13237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase (isomerizing) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4085027","MetaCyc:L-GLN-FRUCT-6-P-AMINOTRANS-RXN","KEGG_REACTION:R00768","Reactome:R-HSA-449715"],"synonyms":[{"name":"D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"GlcN6P synthase activity","type":"related"},{"name":"L-glutamine-D-fructose-6-phosphate amidotransferase activity","type":"related"},{"name":"L-glutamine:D-fructose-6-phosphate isomerase (deaminating)","type":"related"},{"name":"glucosamine 6-phosphate synthase activity","type":"related"},{"name":"glucosamine--fructose-6-phosphate aminotransferase (isomerizing) activity","type":"related"},{"name":"glucosamine-6-phosphate isomerase (glutamine-forming) activity","type":"exact"},{"name":"glucosamine-6-phosphate synthase activity","type":"related"},{"name":"glucosaminephosphate isomerase","type":"broad"},{"name":"hexosephosphate aminotransferase activity","type":"related"}],"termid":"GO:0004360","terms_by_termid":{"GO:0004360":null}}


id: GO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + CDP-ethanolamine = L-serine-phosphoethanolamine + CMP + H+.","definition_xrefs":["RHEA:22656","EC:2.7.8.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"serine-phosphoethanolamine synthase activity","secondary_identifiers":["KEGG_REACTION:R02563","MetaCyc:SERINE-PHOSPHOETHANOLAMINE-SYNTHASE-RXN"],"synonyms":[{"name":"CDP-ethanolamine:L-serine ethanolamine phosphotransferase activity","type":"related"},{"name":"serine ethanolamine phosphate synthetase activity","type":"related"},{"name":"serine ethanolamine phosphodiester synthase activity","type":"related"},{"name":"serine ethanolaminephosphotransferase activity","type":"related"},{"name":"serine-phosphinico-ethanolamine synthase activity","type":"related"},{"name":"serinephosphoethanolamine synthase activity","type":"related"}],"termid":"GO:0047494"}


id: PBO:0084505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific regulatory subunit of the Glc7p protein phosphatase; regulates spore wall formation and septin organization, required for expression of some late meiotic genes and for normal localization of Glc7p","termid":"PBO:0084505"}


id: GO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"positively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002606"}


id: PBO:0040951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 22","termid":"PBO:0040951"}


id: PBO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expression of nus1 and rer2 functionally complements a triple deletion of NUS1, RER2 and SRT1 in S. cerevisiae","termid":"PBO:0016985"}


id: SO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The configuration of the IG and TR variable (V), diversity (D) and joining (J) germline genes before DNA rearrangements (with or without constant (C) genes in undefined configuration. (germline, non rearranged regions of the IG DNA loci).","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene","synonyms":[{"name":"immune_gene","type":"exact"}],"termid":"SO:0002121"}


id: GO:0097186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.","definition_xrefs":["PMID:10206335","PMID:21196346","GOC:sl","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amelogenesis","synonyms":[{"name":"enamel development","type":"exact"}],"termid":"GO:0097186"}


id: GO:0035382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a sterol is transported across a membrane. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sterol transmembrane transport","synonyms":[{"name":"sterol membrane transport","type":"exact"}],"termid":"GO:0035382"}


id: GO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance that is released by the other organism. This includes substances that are released via pathogen cell lysis.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released outside of symbiont (obsolete GO:0044046)","synonyms":[{"name":"interaction with host via substance released outside of symbiont cells","type":"exact"}],"termid":"GO:0044046"}


id: PBO:0038467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 6","termid":"PBO:0038467"}


id: PR:O94437
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ABHD11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00347","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain-containing protein C22H12.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.03","secondary_identifiers":["UniProtKB:O94437"],"synonyms":[{"name":"Spom972h-ABHD11","type":"exact"}],"termid":"PR:O94437"}


id: PBO:0072549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase domain containing 1","termid":"PBO:0072549"}


id: GO:0097618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dinoflagellate sulcus that extends all the way to the posterior end of the cell (also known as antapex). The presence of a sulcal notch makes the dinoflagellate hypocone appear bilobed.","definition_xrefs":["PMID:7002229","Wikipedia:Dinoflagellate#Morphology","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate sulcus","termid":"GO:0097612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005575","GO:0009986"],"is_obsolete":false,"name":"dinoflagellate sulcal notch","synonyms":[{"name":"dinoflagellate sulcus notch","type":"exact"},{"name":"sulcal notch","type":"related"}],"termid":"GO:0097618"}


id: GO:0140500
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"reticulophagy","termid":"GO:0061709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"regulation of reticulophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ER autophagy","type":"exact"},{"name":"regulation of ER degradation","type":"related"},{"name":"regulation of ER-phagy","type":"exact"},{"name":"regulation of autophagy of the ER","type":"exact"},{"name":"regulation of autophagy of the endoplasmic reticulum","type":"exact"},{"name":"regulation of endoplasmic reticulum autophagy","type":"exact"},{"name":"regulation of endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0140500","terms_by_termid":{"GO:0140501":null}}


id: FYPO:0001814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under iron starvation conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal cell population growth during iron starvation","synonyms":[{"name":"normal cell population growth during iron depletion","type":"exact"},{"name":"normal cell population growth during iron deprivation","type":"exact"},{"name":"normal growth during iron starvation","type":"broad"}],"termid":"FYPO:0001814"}


id: PBO:0039959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 2","termid":"PBO:0039959"}


id: PBO:0067295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 380, pseudogene","termid":"PBO:0067295"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: GO:1903268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:12679340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ornithine catabolic process","termid":"GO:1903266"},{"relation_name":"positively_regulates","term_name":"ornithine catabolic process","termid":"GO:0006593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ornithine catabolic process","synonyms":[{"name":"activation of ornithine breakdown","type":"narrow"},{"name":"activation of ornithine catabolic process","type":"narrow"},{"name":"activation of ornithine catabolism","type":"narrow"},{"name":"activation of ornithine degradation","type":"narrow"},{"name":"positive regulation of ornithine breakdown","type":"exact"},{"name":"positive regulation of ornithine catabolism","type":"exact"},{"name":"positive regulation of ornithine degradation","type":"exact"},{"name":"up regulation of ornithine breakdown","type":"exact"},{"name":"up regulation of ornithine catabolic process","type":"exact"},{"name":"up regulation of ornithine catabolism","type":"exact"},{"name":"up regulation of ornithine degradation","type":"exact"},{"name":"up-regulation of ornithine breakdown","type":"exact"},{"name":"up-regulation of ornithine catabolic process","type":"exact"},{"name":"up-regulation of ornithine catabolism","type":"exact"},{"name":"up-regulation of ornithine degradation","type":"exact"},{"name":"upregulation of ornithine breakdown","type":"exact"},{"name":"upregulation of ornithine catabolic process","type":"exact"},{"name":"upregulation of ornithine catabolism","type":"exact"},{"name":"upregulation of ornithine degradation","type":"exact"}],"termid":"GO:1903268"}


id: PBO:0091509
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3855791delG","termid":"PBO:0091509"}


id: PATO:0001865
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's having a quadric surface in three dimensions obtained by rotating an ellipse about one of its principal axes. Includes spheres and oblate/prolate spheroids.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Spheroid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spheroid","secondary_identifiers":["PATO:0001864"],"synonyms":[{"name":"sphericality","type":"related"}],"termid":"PATO:0001865"}


id: GO:0061841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which transports ferrous iron (Fe(III) or Fe3+) ions from the vacuole, the main storage component of intracellular free iron, into the cytoplasm in a low iron environment.","definition_xrefs":["PMID:9413439","GOC:bhm","PMID:10608875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"ferroxidase complex","termid":"GO:1905862"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005773","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"high-affinity iron exporter complex","synonyms":[{"name":"FET5-FTH1 high affinity iron exporter complex","type":"narrow"},{"name":"FET5-FTH1 high-affinity iron exporter complex","type":"narrow"},{"name":"high affinity iron exporter complex","type":"exact"}],"termid":"GO:0061841"}


id: GO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete subtilisin activity (obsolete GO:0004291)","synonyms":[{"name":"ALK-enzyme","type":"related"},{"name":"SP 266","type":"related"},{"name":"alcalase 0.6L","type":"related"},{"name":"alcalase 2.5L","type":"related"},{"name":"alcalase activity","type":"related"},{"name":"bacillopeptidase A","type":"related"},{"name":"bacillopeptidase B","type":"related"},{"name":"bacillus subtilis alkaline proteinase activity","type":"related"},{"name":"bacillus subtilis alkaline proteinase bioprase activity","type":"related"},{"name":"bioprase AL 15","type":"related"},{"name":"bioprase APL 30","type":"related"},{"name":"colistinase activity","type":"related"},{"name":"esperase activity","type":"related"},{"name":"genenase I","type":"related"},{"name":"kazusase activity","type":"related"},{"name":"maxatase activity","type":"related"},{"name":"opticlean","type":"related"},{"name":"orientase 10B","type":"related"},{"name":"protease S","type":"related"},{"name":"protease VIII","type":"related"},{"name":"protease XXVII","type":"related"},{"name":"protin A 3L","type":"related"},{"name":"savinase 16.0L","type":"related"},{"name":"savinase 32.0 L EX","type":"related"},{"name":"savinase 4.0T","type":"related"},{"name":"savinase 8.0L","type":"related"},{"name":"savinase activity","type":"related"},{"name":"subtilisin BL","type":"related"},{"name":"subtilisin DY","type":"related"},{"name":"subtilisin E","type":"related"},{"name":"subtilisin GX","type":"related"},{"name":"subtilisin J","type":"related"},{"name":"subtilisin S41","type":"related"},{"name":"subtilisin activity","type":"exact"},{"name":"subtilisin sendai","type":"related"},{"name":"subtilopeptidase activity","type":"related"},{"name":"superase activity","type":"related"},{"name":"thermoase","type":"broad"},{"name":"thermoase PC 10","type":"related"}],"termid":"GO:0004291"}


id: PBO:0068888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 129, pseudogene","termid":"PBO:0068888"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0087720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; conserved from yeast to human; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for transcriptional activation and has a role in basal transcription; protein abundance increases in response to DNA replication stress","termid":"PBO:0087720"}


id: GO:0050834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide","termid":"GO:0050834"}


id: GO:0019706
data:
  {"annotated_genes":["SJAG_00895","SJAG_01299","SJAG_04451","SJAG_01112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91964,99156,104304,106171],"is_not":false,"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (systematic name, hexadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["GOC:ai","RHEA:36683","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647982","Reactome:R-HSA-9829047","Reactome:R-HSA-9830875","Reactome:R-HSA-9694341","Reactome:R-HSA-9021072","EC:2.3.1.225","Reactome:R-HSA-5682084"],"synonyms":[{"name":"protein-cysteine S-palmitoleyltransferase activity","type":"related"}],"termid":"GO:0019706","terms_by_termid":{"GO:0019706":null}}


id: PR:P29458
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.17","secondary_identifiers":["UniProtKB:P29458"],"synonyms":[{"name":"SPCC16A11.17","type":"related"},{"name":"Spom972h-MCM4","type":"exact"},{"name":"cdc21","type":"related"},{"name":"cell division control protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"minichromosome maintenance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P29458"}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: PBO:0002947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U24","termid":"PBO:0002947"}


id: PBO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein, predicted methyltransferase","termid":"PBO:0011465"}


id: GO:2000443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"regulation of TLR21 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000443"}


id: GO:0018939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving n-octane, the 8 carbon straight chain alkane used in organic syntheses, calibrations, and azeotropic distillations. It is a common component of gasoline and other petroleum products and the engine fuel antiknocking properties of an isomer of n-octane are used as a comparative standard in the Octane Rating System.","definition_xrefs":["UM-BBD_pathwayID:oct"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane metabolic process","synonyms":[{"name":"n-octane metabolism","type":"exact"}],"termid":"GO:0018939"}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: PBO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 2","termid":"PBO:0051617"}


id: GO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glial cell differentiation","termid":"GO:0045687"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte differentiation","synonyms":[{"name":"activation of oligodendrocyte differentiation","type":"narrow"},{"name":"stimulation of oligodendrocyte differentiation","type":"narrow"},{"name":"up regulation of oligodendrocyte differentiation","type":"exact"},{"name":"up-regulation of oligodendrocyte differentiation","type":"exact"},{"name":"upregulation of oligodendrocyte differentiation","type":"exact"}],"termid":"GO:0048714"}


id: GO:0070486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one leukocyte to one or more other leukocytes via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte aggregation","synonyms":[{"name":"immune cell aggregation","type":"exact"},{"name":"leucocyte aggregation","type":"exact"},{"name":"white blood cell aggregation","type":"exact"},{"name":"white corpuscle aggregation","type":"exact"}],"termid":"GO:0070486"}


id: GO:0102613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,3,7-trimethyluric acid + O2 + NADH + 3 H+ = 1,3,7-trimethyl-5-hydroxyisourate + NAD + H2O.","definition_xrefs":["GOC:pz","RHEA:48992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"trimethyluric acid monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15454"],"termid":"GO:0102613"}


id: GO:0097532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:aa","Wikipedia:Acid","GOC:go_curators","GOC:rl","PMID:19170886","GOC:BHF","PMID:10615049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to acid chemical","synonyms":[{"name":"response to acid stress","type":"broad"},{"name":"stress response to acid","type":"broad"}],"termid":"GO:0097532"}


id: SO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide_repeat is a single copy of an internal sequence repetition.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_repeat","secondary_identifiers":["BS:00070"],"synonyms":[{"name":"polypeptide repeat","type":"exact"},{"name":"repeat","type":"related"}],"termid":"SO:0001068"}


id: GO:0008809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine = L-carnitine.","definition_xrefs":["MetaCyc:CARNRACE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"carnitine racemase activity","termid":"GO:0008809"}


id: GO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligosaccharide-diphosphodolichol = dolichol-phosphate + oligosaccharide phosphate.","definition_xrefs":["MetaCyc:3.6.1.44-RXN","EC:3.6.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"oligosaccharide-diphosphodolichol diphosphatase activity","secondary_identifiers":["RHEA:15205"],"synonyms":[{"name":"oligosaccharide-diphosphodolichol phosphodolichohydrolase activity","type":"related"},{"name":"oligosaccharide-diphosphodolichol pyrophosphatase activity","type":"exact"}],"termid":"GO:0047430"}


id: PBO:0073476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan gamma","termid":"PBO:0073476"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: PBO:0049267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gse1 coiled-coil protein","termid":"PBO:0049267"}


id: GO:0075024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont phospholipase C-mediated signal transduction during appressorium formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phospholipase C-mediated activation of appressorium formation (obsolete GO:0075024)","termid":"GO:0075024"}


id: PBO:0038658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrosin","termid":"PBO:0038658"}


id: PBO:0072604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSL1D1 divergent transcript","termid":"PBO:0072604"}


id: GO:0007307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Amplification by up to 60-fold of the loci containing the chorion gene clusters. Amplification is necessary for the rapid synthesis of chorion proteins by the follicle cells, and occurs by repeated firing of one or more origins located within each gene cluster.","definition_xrefs":["GOC:mtg_sensu","PMID:11157771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA amplification","termid":"GO:0006277"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"eggshell chorion gene amplification","termid":"GO:0007307"}


id: PBO:0056820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD12 antisense RNA 1","termid":"PBO:0056820"}


id: GO:0043302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte degranulation.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"positive regulation of regulated secretory pathway","termid":"GO:1903307"},{"relation_name":"positively_regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte degranulation","synonyms":[{"name":"activation of leukocyte degranulation","type":"narrow"},{"name":"positive regulation of immune cell degranulation","type":"exact"},{"name":"positive regulation of leucocyte degranulation","type":"exact"},{"name":"stimulation of leukocyte degranulation","type":"narrow"},{"name":"up regulation of leukocyte degranulation","type":"exact"},{"name":"up-regulation of leukocyte degranulation","type":"exact"},{"name":"upregulation of leukocyte degranulation","type":"exact"}],"termid":"GO:0043302"}


id: GO:1901502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ether.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ether catabolic process","synonyms":[{"name":"ether breakdown","type":"exact"},{"name":"ether catabolism","type":"exact"},{"name":"ether degradation","type":"exact"}],"termid":"GO:1901502"}


id: PBO:0027617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body_following_normal_mitosis","termid":"PBO:0027617"}


id: GO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.","definition_xrefs":["PMID:21109188","GOC:mcc","PMID:21070972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondria-associated ubiquitin-dependent protein catabolic process","synonyms":[{"name":"MAD","type":"exact"},{"name":"mitochondria-associated protein catabolic process","type":"exact"},{"name":"mitochondria-associated protein degradation","type":"exact"},{"name":"mitochondrion-associated protein catabolic process","type":"exact"}],"termid":"GO:0072671"}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: PBO:0000539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase","termid":"PBO:0000539"}


id: PR:Q10338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C582.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC582.04c","synonyms":[{"name":"Spom972h-dsh1","type":"exact"}],"termid":"PR:Q10338"}


id: PBO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41","termid":"PBO:0071744"}


id: GO:0090279
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109381,87295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import","termid":"GO:0070509"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transmembrane calcium influx","type":"related"}],"termid":"GO:0090279","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: _global:results_in_division_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a entity and its participation in a process that results in the division of the entity into two entities of the same type.","definition_xrefs":["GOC:mtg_berkeley_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_division_of","secondary_identifiers":["GOREL:0001019"],"termid":"_global:results_in_division_of"}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: PBO:0064186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA","termid":"PBO:0064186"}


id: GO:0004671
data:
  {"annotated_genes":["SJAG_05016"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83958],"is_not":false,"summary":null,"term":"GO:0004671"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester.","definition_xrefs":["EC:2.1.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-terminal carboxyl O-methyltransferase activity","termid":"GO:0003880"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740","GO:0140096","GO:0008276"],"is_obsolete":false,"name":"protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04496","MetaCyc:2.1.1.100-RXN","GO:0018225","Reactome:R-HSA-9647977","RHEA:21672","Reactome:R-HSA-6788650"],"synonyms":[{"name":"S-adenosyl-L-methionine:protein-C-terminal-S-farnesyl-L-cysteine O-methyltransferase activity","type":"related"},{"name":"S-farnesylcysteine methyltransferase activity","type":"related"},{"name":"farnesyl cysteine C-terminal methyltransferase activity","type":"related"},{"name":"farnesyl-protein carboxymethyltransferase activity","type":"related"},{"name":"farnesylated protein C-terminal O-methyltransferase activity","type":"related"},{"name":"isoprenylated protein methyltransferase activity","type":"related"},{"name":"isoprenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylated protein carboxyl methyltransferase activity","type":"related"},{"name":"prenylated protein methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxyl methyltransferase activity","type":"related"},{"name":"prenylcysteine carboxylmethyltransferase activity","type":"related"},{"name":"prenylcysteine carboxymethyltransferase activity","type":"related"},{"name":"prenylcysteine methyltransferase activity","type":"related"},{"name":"protein C-terminal farnesylcysteine O-methyltransferase activity","type":"related"},{"name":"protein S-farnesylcysteine C-terminal methyltransferase activity","type":"related"},{"name":"protein-S-isoprenylcysteine O-methyltransferase activity","type":"exact"}],"termid":"GO:0004671","terms_by_termid":{"GO:0004671":null}}


id: PBO:0041288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1r","termid":"PBO:0041288"}


id: PBO:0017522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4, Gim3 (predicted)","termid":"PBO:0017522"}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: GO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of monocyte chemotactic protein-1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of monocyte chemotactic protein-1 production","termid":"GO:0071637"},{"relation_name":"positively_regulates","term_name":"monocyte chemotactic protein-1 production","termid":"GO:0071605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of monocyte chemotactic protein-1 production","synonyms":[{"name":"positive regulation of CCL2 production","type":"exact"},{"name":"positive regulation of MCP-1 production","type":"exact"}],"termid":"GO:0071639"}


id: PBO:0036345
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URAcil requiring","termid":"PBO:0036345"}


id: PBO:0077668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13C","termid":"PBO:0077668"}


id: PBO:0057205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 375","termid":"PBO:0057205"}


id: PBO:0070007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1304, pseudogene","termid":"PBO:0070007"}


id: PBO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rad8","termid":"PBO:0000172"}


id: PBO:0054870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2284","termid":"PBO:0054870"}


id: FYPO:0000954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nickel cations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on nickel cation","synonyms":[{"name":"normal cell population growth in presence of nickel cations","type":"exact"},{"name":"normal cell population growth on nickel","type":"exact"},{"name":"normal cell population growth on nickel cation","type":"exact"},{"name":"normal cellular response to nickel cation","type":"related"},{"name":"normal vegetative cell population growth on nickel cation","type":"exact"}],"termid":"FYPO:0000954"}


id: GO:1904396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["PMID:7722643","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuromuscular junction development","synonyms":[{"name":"regulation of NMJ stability","type":"related"},{"name":"regulation of neuromuscular junction organization","type":"exact"},{"name":"regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904396"}


id: PBO:0070564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 30","termid":"PBO:0070564"}


id: PBO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps41 (predicted)","termid":"PBO:0001073"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_01876","SJAG_00900","SJAG_04349","SJAG_03976","SJAG_01088","SJAG_03783","SJAG_03250","SJAG_16459","SJAG_00181","SJAG_00380","SJAG_00108","SJAG_00301","SJAG_03963","SJAG_02453","SJAG_00821","SJAG_01586","SJAG_02912","SJAG_01229","SJAG_03970","SJAG_02117","SJAG_04643","SJAG_05207","SJAG_01324","SJAG_03347","SJAG_02584","SJAG_03511","SJAG_02587","SJAG_02049","SJAG_02811","SJAG_02240","SJAG_04489","SJAG_03848","SJAG_04552","SJAG_02234","SJAG_03726","SJAG_05210","SJAG_00916","SJAG_01281","SJAG_02349","SJAG_00416","SJAG_03442","SJAG_05303","SJAG_04822","SJAG_01645","SJAG_01488","SJAG_04902","SJAG_04912","SJAG_00777","SJAG_03892","SJAG_03756","SJAG_04023","SJAG_03403","SJAG_01080","SJAG_01527","SJAG_04024","SJAG_04966","SJAG_04070","SJAG_00204","SJAG_07012","SJAG_01981","SJAG_04047","SJAG_03005","SJAG_01913","SJAG_03385","SJAG_03137","SJAG_01809","SJAG_00299","SJAG_03072","SJAG_01360","SJAG_04936","SJAG_04931","SJAG_02315","SJAG_01242","SJAG_01445","SJAG_00208","SJAG_01598","SJAG_05245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71085,85208,86256,98022,110528],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[84238,87577,87710,110461,84202,84125,101779,87147,109329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[106284,113543,100111,86665,92197,91850,93217,105196,85014,88359,104817,114865,95960,97496,105824,95561,104703,103394,90257,92943,107520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[96303,86273,102579,107486,100090,88074,106910,112911,84240,103655,94025,96942,88693,98032,114417,84071,106660,87579,97171,101736,105812,98181,102758,92613,96362,105012,92030,105827,87711,101000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[84725,94744,103150,106229,108593,110886,99777,94917,87712,100170,99188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[88192,102760,100092,85015,86274,100112,97173,93467,98183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[103395,87580,84073,86644,106661,88360,87713,101001,92032,105813,94027,88075,105395,102581,107487,110720,84241,112405,96944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0045324":null,"GO:0120113":null}}


id: PBO:0066813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 112","termid":"PBO:0066813"}


id: PBO:0045368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 1","termid":"PBO:0045368"}


id: PBO:0091154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase","termid":"PBO:0091154"}


id: GO:0062042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:20951801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"},{"relation_name":"regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"}


id: PBO:0041766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 6","termid":"PBO:0041766"}


id: GO:0009174
data:
  {"annotated_genes":["SJAG_00197","SJAG_00694","SJAG_03164","SJAG_00533","SJAG_03708","SJAG_04709","SJAG_04713","SJAG_00444","SJAG_00964","SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85551,107936,94559,112735,89482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[67026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[83580,110926,84566,88044,89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009174","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: PBO:0028108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_pentakisphosphate_level","termid":"PBO:0028108"}


id: GO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exit of a fully formed virion particles from the host cell by exocytosis via a host vesicle.","definition_xrefs":["ISBN:0072370319","PMID:33157038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral exocytosis","synonyms":[{"name":"viral egress by exocytosis","type":"exact"}],"termid":"GO:0046754"}


id: GO:0004578
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89967],"is_not":false,"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + chitobiosyldiphosphodolichol = GDP + beta-D-mannosylchitobiosyldiphosphodolichol.","definition_xrefs":["EC:2.4.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-1,4-mannosyltransferase activity","termid":"GO:0019187"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"chitobiosyldiphosphodolichol beta-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446218","MetaCyc:2.4.1.142-RXN","Reactome:R-HSA-4549382","RHEA:13865"],"synonyms":[{"name":"GDP-mannose-dolichol diphosphochitobiose mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:chitobiosyldiphosphodolichol beta-D-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-dolichol diphosphochitobiose mannosyltransferase activity","type":"related"}],"termid":"GO:0004578","terms_by_termid":{"GO:0004578":null}}


id: PBO:0048117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose mutarotase","termid":"PBO:0048117"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: GO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"guanine biosynthetic process","termid":"GO:0046099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanine salvage","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006178"}


id: PBO:0067618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 790, pseudogene","termid":"PBO:0067618"}


id: GO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a natural killer cell, a lymphocyte that can spontaneously kill a variety of target cells without prior antigenic activation.","definition_xrefs":["GOC:add","PMID:15728472","CL:0000623","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell apoptotic process","synonyms":[{"name":"NK cell apoptosis","type":"exact"},{"name":"natural killer cell apoptosis","type":"narrow"}],"termid":"GO:0070246"}


id: PBO:0056757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 9","termid":"PBO:0056757"}


id: PBO:0039375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin","termid":"PBO:0039375"}


id: PBO:0059523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6","termid":"PBO:0059523"}


id: PBO:0077652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 1A","termid":"PBO:0077652"}


id: PBO:0073545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3TC2 divergent transcript","termid":"PBO:0073545"}


id: SO:3000000
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene component region which acts as a recombinational unit of a gene whose functional form is generated through somatic recombination.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_component_region","termid":"SO:0000842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_segment","synonyms":[{"name":"gene segment","type":"exact"}],"termid":"SO:3000000"}


id: PBO:0043302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 19A","termid":"PBO:0043302"}


id: PBO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase, implicated in ribosome biogenesis (predicted)","termid":"PBO:0011464"}


id: FYPO:0007298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is abnormal. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein aggregate center formation","synonyms":[{"name":"abnormal PAC formation","type":"exact"},{"name":"abnormal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abnormal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abnormal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007298"}


id: PBO:0057133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 216b","termid":"PBO:0057133"}


id: FYPO:0004262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004262"}


id: GO:0032291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a glial cell membrane closes around an axon in the central nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon ensheathment in central nervous system","synonyms":[{"name":"ensheathment of axons in central nervous system","type":"exact"}],"termid":"GO:0032291"}


id: SO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes bases from the coding sequence starting within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_deletion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_deletion","type":"exact"},{"name":"disruptive decrease in CDS length","type":"exact"},{"name":"disruptive inframe deletion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_DELETION","type":"exact"}],"termid":"SO:0001826"}


id: FYPO:0004982
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115564,115566],"is_not":false,"summary":null,"term":"FYPO:0004982"}],"single_locus_phenotype":[{"annotations":[115552],"is_not":false,"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromeric region are present at greater levels than normal.","definition_xrefs":["PMID:26369364","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"increased centromeric transcript level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased accumulation of centromeric transcripts","type":"related"},{"name":"increased accumulation of centromeric transcripts during vegetative growth","type":"related"},{"name":"increased centromere transcript level","type":"exact"},{"name":"increased centromere-derived transcript level","type":"exact"},{"name":"increased centromeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric transcript level during vegetative growth","type":"exact"},{"name":"increased level of centromeric transcripts","type":"exact"}],"termid":"FYPO:0004982","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004982":null}}


id: SO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nucleomorph sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nucleomorphic_sequence","termid":"SO:0000739"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorph_gene","synonyms":[{"name":"nucleomorph gene","type":"exact"}],"termid":"SO:0000097"}


id: GO:0007033
data:
  {"annotated_genes":["SJAG_02433","SJAG_01324","SJAG_01251","SJAG_04822","SJAG_02414","SJAG_03005","SJAG_04343","SJAG_06309","SJAG_03137","SJAG_03851","SJAG_05184","SJAG_01080","SJAG_03386","SJAG_05017","SJAG_03100","SJAG_03347","SJAG_03725","SJAG_01467","SJAG_00645","SJAG_03915","SJAG_03011","SJAG_05289","SJAG_01772","SJAG_00330","SJAG_02441","SJAG_01299","SJAG_03892","SJAG_02384","SJAG_05245","SJAG_04966","SJAG_04232","SJAG_02699","SJAG_00114","SJAG_04294","SJAG_04909","SJAG_04655","SJAG_02640","SJAG_01876","SJAG_02432","SJAG_01274","SJAG_01283","SJAG_03072","SJAG_05194","SJAG_04502","SJAG_01561","SJAG_00380","SJAG_01598","SJAG_00029","SJAG_01072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85820,88095,92033,92202,93700,94747,103656,109671,114419],"is_not":false,"summary":null,"term":"GO:0007033"},{"annotations":[83948,93654,87691,99638,109666,109861,88975,71617,96027,105789,86175,90882,100634,107711,113805,90696,88692,92702,93941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000045"},{"annotations":[97499],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061192"},{"annotations":[104584,104674],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[93688,106286],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061191"},{"annotations":[93458],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032889"},{"annotations":[90390,113545,95563,112199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097576"},{"annotations":[104303,112842,96363,97174,100668,87375,105448,110529,87249,96304,96010,96804,106288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042144"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00114":null,"SJAG_00330":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_01072":null,"SJAG_01080":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01299":null,"SJAG_01324":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_01876":null,"SJAG_02384":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03072":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03386":null,"SJAG_03725":null,"SJAG_03851":null,"SJAG_03892":null,"SJAG_03915":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04343":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04822":null,"SJAG_04909":null,"SJAG_04966":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05245":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044086"],"synonyms":[{"name":"vacuolar assembly","type":"narrow"},{"name":"vacuole biogenesis","type":"related"},{"name":"vacuole organisation","type":"exact"},{"name":"vacuole organization and biogenesis","type":"related"}],"termid":"GO:0007033","terms_by_termid":{"GO:0000045":null,"GO:0007033":null,"GO:0032889":null,"GO:0042144":null,"GO:0061191":null,"GO:0061192":null,"GO:0097576":null,"GO:2000786":null}}


