# terms

id: FYPO:0007047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}


id: GO:0004682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: casein + ATP = phosphocasein + ADP.","definition_xrefs":["EC:2.7.11.1"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase CK2 activity (obsolete GO:0004682)","synonyms":[{"name":"casein kinase II activity","type":"related"},{"name":"casein kinase II, catalytic activity","type":"exact"},{"name":"protein kinase CK2 activity","type":"exact"},{"name":"protein kinase CK2, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004682"}


id: GO:0071900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}


id: PBO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 3","termid":"PBO:0044308"}


id: FYPO:0000166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which negative regulation of the G2 to M transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}


id: PBO:0085987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal growth rate at 15 degrees C; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; mtc4 is synthetically sick with cdc13-1","termid":"PBO:0085987"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: PBO:0056456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 2","termid":"PBO:0056456"}


id: GO:0005669
data:
  {"annotated_genes":["SJAG_03285","SJAG_04654","SJAG_00421","SJAG_01475","SJAG_04917","SJAG_00584","SJAG_02541","SJAG_01808","SJAG_04274","SJAG_02458","SJAG_03900","SJAG_04977","SJAG_03107","SJAG_00741","SJAG_00735","SJAG_00872"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83463,84415,84674,85344,89549,90193,91621,92073,92839,96245,99629,102895,110233,110799,111383,113561],"is_not":false,"summary":null,"term":"GO:0005669"}]},"cv_name":"cellular_component","definition":"A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0471953393","ISBN:0879695501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00584":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00872":null,"SJAG_01475":null,"SJAG_01808":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_03107":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04654":null,"SJAG_04917":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"transcription factor TFIID complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005669","terms_by_termid":{"GO:0005669":null}}


id: GO:0072433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a mitotic G2/M transition DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in mitotic G2 DNA damage checkpoint (obsolete GO:0072433)","synonyms":[{"name":"G2/M transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"detection of DNA damage stimulus involved in G2 DNA damage checkpoint","type":"related"},{"name":"detection of DNA damage stimulus involved in G2/M transition DNA damage checkpoint","type":"related"},{"name":"detection of DNA damage stimulus involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2/M transition DNA damage checkpoint sensor mechanism","type":"related"},{"name":"mitotic G2/M transition DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in G2/M transition DNA damage checkpoint","type":"related"},{"name":"sensing involved in mitotic G2/M transition DNA damage checkpoint","type":"related"}],"termid":"GO:0072433"}


id: GO:1904275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a tricellular tight junction into its constituent components.","definition_xrefs":["GOC:mr","PMID:4203962","GOC:TermGenie","PMID:22640933","PMID:25097825","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tricellular tight junction disassembly","termid":"GO:1904275"}


id: PBO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein beta","termid":"PBO:0044008"}


id: PBO:0065747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 2","termid":"PBO:0065747"}


id: PR:O94501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.03","secondary_identifiers":["UniProtKB:O94501"],"synonyms":[{"name":"CCT-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT1","type":"exact"},{"name":"TCP-1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94501"}


id: PBO:0026895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026895"}


id: PBO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase, type II Lsb6","termid":"PBO:0110105"}


id: GO:0106251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction N4-acetylcytidine +H2O = cytidine + acetate.","definition_xrefs":["PMID:31964920","RHEA:62932","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N4-acetylcytidine amidohydrolase activity","termid":"GO:0106251"}


id: GO:0051342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide phosphodiesterase activity, the catalysis of the reaction: nucleotide 3',5'-cyclic phosphate + H2O = nucleotide 5'-phosphate.","definition_xrefs":["GOC:tb","EC:3.1.4.17","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyclic-nucleotide phosphodiesterase activity","synonyms":[{"name":"3',5' cyclic nucleotide phosphodiesterase regulator","type":"exact"},{"name":"3',5'-cyclic-AMP phosphodiesterase regulator","type":"narrow"},{"name":"cAMP phosphodiesterase regulator","type":"narrow"},{"name":"phosphodiesterase regulator","type":"related"},{"name":"regulation of 3',5' cyclic nucleotide phosphodiesterase activity","type":"exact"},{"name":"regulation of 3',5'-cyclic-AMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cAMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cGMP phosphodiesterase activity","type":"narrow"},{"name":"regulation of cyclic nucleotide phosphodiesterase activity","type":"exact"}],"termid":"GO:0051342"}


id: PBO:0040491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 8","termid":"PBO:0040491"}


id: FYPO:0006141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on gluconate carbon source","termid":"FYPO:0001830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0005447","FYPO:0002060","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on gluconate carbon source","synonyms":[{"name":"abolished gluconate utilization","type":"related"},{"name":"abolished growth on gluconate carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on gluconate carbon source","type":"exact"},{"name":"cell population growth on gluconate carbon source abolished","type":"exact"}],"termid":"FYPO:0006141"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: SO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding cysteinyl tRNA (SO:0000258).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine_tRNA_primary_transcript","synonyms":[{"name":"cysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0000215"}


id: PBO:0050474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A2","termid":"PBO:0050474"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: PBO:0040282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 2","termid":"PBO:0040282"}


id: PBO:0082956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein involved in halotolerance; decreases intracellular Na+ (via Ena1p) and increases intracellular K+ by decreasing efflux; expression repressed by Ssn6p-Tup1p and Sko1p and induced by NaCl, KCl, and sorbitol through Gcn4p","termid":"PBO:0082956"}


id: PBO:0057501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 619","termid":"PBO:0057501"}


id: PBO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 46","termid":"PBO:0045294"}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"gap junction assembly","termid":"GO:0016264"}


id: PBO:0042446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 4","termid":"PBO:0042446"}


id: GO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of appressorium formation","termid":"GO:0075017"},{"relation_name":"positively_regulates","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appressorium formation","synonyms":[{"name":"positive regulation of appressorium formation on or near host","type":"related"}],"termid":"GO:0075018"}


id: FYPO:0003932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an exonucleolytic RNA catabolic process that proceeds in the 5' to 3' direction to degrade mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0034428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear mRNA catabolic process","termid":"FYPO:0002939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process","synonyms":[{"name":"normal 5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear 5'-3' exonucleolytic mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","type":"exact"}],"termid":"FYPO:0003932"}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: GO:0010233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within the phloem during long distance transport between source and sink tissues.","definition_xrefs":["PMID:19025382","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phloem transport","termid":"GO:0010233"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: SO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous sequence which begins with, and includes, a start codon and ends with, and includes, a stop codon.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS","synonyms":[{"name":"INSDC_feature:CDS","type":"exact"},{"name":"coding sequence","type":"exact"},{"name":"coding_sequence","type":"exact"}],"termid":"SO:0000316"}


id: PBO:0056108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 3","termid":"PBO:0056108"}


id: GO:0047444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate + N-acyl-D-mannosamine 6-phosphate = phosphate + N-acylneuraminate 9-phosphate.","definition_xrefs":["EC:2.5.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"N-acylneuraminate-9-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-9988","GO:0019007","Reactome:R-HSA-4084976","RHEA:13421"],"synonyms":[{"name":"N-acetylneuraminate 9-phosphate lyase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate sialic acid 9-phosphate synthase activity","type":"related"},{"name":"N-acetylneuraminate 9-phosphate synthetase activity","type":"related"},{"name":"N-acetylneuraminic acid phosphate synthase activity","type":"exact"},{"name":"N-acylneuraminate-9-phosphate pyruvate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"phosphoenolpyruvate:N-acyl-D-mannosamine-6-phosphate 1-(2-carboxy-2-oxoethyl)transferase activity","type":"related"},{"name":"sialic acid 9-phosphate synthetase activity","type":"related"}],"termid":"GO:0047444"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:15805471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PBO:0060213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate diphosphate decarboxylase","termid":"PBO:0060213"}


id: PBO:0087813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric phosphoglycerate mutase; mediates the conversion of 3-phosphoglycerate to 2-phosphoglycerate during glycolysis and the reverse reaction during gluconeogenesis","termid":"PBO:0087813"}


id: SO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA in rearranged configuration including at least one D-J-GENE, one J-GENE and one C-GENE.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_J_C_cluster","synonyms":[{"name":"(DJ)-J-C-CLUSTER","type":"exact"},{"name":"DJ J C cluster","type":"exact"}],"termid":"SO:0000540"}


id: PBO:0090819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical variant C2 domain protein, human FAM102A and FAM102B ortholog, implicated in signalling or endocytosis","termid":"PBO:0090819"}


id: GO:1902623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil migration.","definition_xrefs":["PMID:1826836","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"negatively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil migration","synonyms":[{"name":"down regulation of neutrophil migration","type":"exact"},{"name":"down-regulation of neutrophil migration","type":"exact"},{"name":"downregulation of neutrophil migration","type":"exact"},{"name":"inhibition of neutrophil migration","type":"narrow"}],"termid":"GO:1902623"}


id: PBO:0113029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta (pol zeta); involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0113029"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: PR:O14286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 7, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01534","PANTHER:PTHR24221:SF68","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur clusters transporter atm1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.01","secondary_identifiers":["UniProtKB:O14286"],"synonyms":[{"name":"Spom972h-ABCB7","type":"exact"}],"termid":"PR:O14286"}


id: PBO:0034063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-kills","termid":"PBO:0034063"}


id: SO:1000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Change of a purine nucleotide, A or G , into a pyrimidine nucleotide C or T.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transversion","termid":"SO:1000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_to_pyrimidine_transversion","synonyms":[{"name":"purine to pyrimidine transversion","type":"exact"}],"termid":"SO:1000023"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: MOD:01210
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to the copper(1+) glutamate salt.","definition_xrefs":["Unimod:531#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-glutamate","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01210"}


id: GO:0007281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell development","synonyms":[{"name":"gametogenesis","type":"narrow"},{"name":"germ-cell development","type":"exact"},{"name":"primordial germ cell development","type":"narrow"}],"termid":"GO:0007281"}


id: GO:0016566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that stops or downregulates transcription of specific genes or sets of genes.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete specific transcriptional repressor activity (obsolete GO:0016566)","synonyms":[{"name":"specific transcriptional repressor activity","type":"exact"}],"termid":"GO:0016566"}


id: PBO:0073451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor SWAP","termid":"PBO:0073451"}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: PBO:0043654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 9","termid":"PBO:0043654"}


id: PBO:0090412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15","termid":"PBO:0090412"}


id: PBO:0025454
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase deficiency","termid":"PBO:0025454"}


id: PBO:0085225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Para hydroxybenzoate polyprenyl transferase; catalyzes the second step in ubiquinone (coenzyme Q) biosynthesis; human COQ2, mutations in which are implicated in an increased risk of mutiple-system atrophy, can complement a yeast coq2 null mutant","termid":"PBO:0085225"}


id: GO:0014914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a myoblast cell to attain its fully functional state involved in muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast maturation","termid":"GO:0048628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast maturation involved in muscle regeneration","termid":"GO:0014914"}


id: GO:0098983
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse that lacks an electron dense postsynaptic specialization, uses GABA as a neurotransmitter and whose activity results in inhibitory postsynaptic potentials.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetric synapse","termid":"GO:0032280"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"},{"relation_name":"is_a","term_name":"GABA-ergic synapse","termid":"GO:0098982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symmetric, GABA-ergic, inhibitory synapse","termid":"GO:0098983"}


id: PBO:0007025
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds PLD site 5'-AGTTTACGTAATCT-3'","termid":"PBO:0007025"}


id: SO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is skipped during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plus_1_translational_frameshift","synonyms":[{"name":"plus 1 ribosomal frameshift","type":"exact"},{"name":"plus 1 translational frameshift","type":"exact"}],"termid":"SO:0001211"}


id: PBO:0055189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2613","termid":"PBO:0055189"}


id: PBO:0076963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1","termid":"PBO:0076963"}


id: FYPO:0003867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of ubiquitinated protein measured in the cell is higher than normal when the cell is in G0 phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:20133687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during G0","termid":"FYPO:0003866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during G0","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during G0","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cell quiescence","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during quiescence","type":"exact"},{"name":"increased ubiquitinated protein level during G0","type":"exact"}],"termid":"FYPO:0003867"}


id: PBO:0070458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 1","termid":"PBO:0070458"}


id: PBO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 6","termid":"PBO:0071700"}


id: PBO:0034458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034458"}


id: GO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-neomenthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.208","RHEA:23812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-neomenthol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02548","MetaCyc:+-NEOMENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-neomenthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047501"}


id: PBO:0040116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 3","termid":"PBO:0040116"}


id: PBO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic acid transport protein","termid":"PBO:0000059"}


id: PBO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome alignment maintaining phosphoprotein 1","termid":"PBO:0042942"}


id: PBO:0091733
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously thought to be a ribosomal protein","termid":"PBO:0091733"}


id: PBO:0079934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional SNARE in the ER 1","termid":"PBO:0079934"}


id: PBO:0077859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3","termid":"PBO:0077859"}


id: GO:1901692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:12021768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of compound eye retinal cell apoptotic process","termid":"GO:1901692"}


id: GO:0021995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of joining together the neural folds at either end of the neural tube.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuropore closure","termid":"GO:0021995"}


id: PR:Q92376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.14c","synonyms":[{"name":"Spom972h-pkl1","type":"exact"}],"termid":"PR:Q92376"}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: PBO:0070002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1298, pseudogene","termid":"PBO:0070002"}


id: GO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salivary gland determination in an adult organism.","definition_xrefs":["GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of salivary gland boundary specification","termid":"GO:0045706"},{"relation_name":"is_a","term_name":"regulation of adult salivary gland boundary specification","termid":"GO:0045707"},{"relation_name":"positively_regulates","term_name":"adult salivary gland boundary specification","termid":"GO:0007434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adult salivary gland boundary specification","synonyms":[{"name":"activation of adult salivary gland determination","type":"narrow"},{"name":"positive regulation of adult salivary gland determination","type":"exact"},{"name":"stimulation of adult salivary gland determination","type":"narrow"},{"name":"up regulation of adult salivary gland determination","type":"exact"},{"name":"up-regulation of adult salivary gland determination","type":"exact"},{"name":"upregulation of adult salivary gland determination","type":"exact"}],"termid":"GO:0045711"}


id: PBO:0081323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 114","termid":"PBO:0081323"}


id: SO:1001247
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"orphan","termid":"SO:0000910"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan_CDS","synonyms":[{"name":"orphan CDS","type":"exact"}],"termid":"SO:1001247"}


id: PBO:0050582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 6","termid":"PBO:0050582"}


id: GO:0003974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-galactosamine.","definition_xrefs":["EC:5.1.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 4-epimerase activity","secondary_identifiers":["MetaCyc:UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN","RHEA:20517"],"synonyms":[{"name":"UDP acetylglucosamine epimerase activity","type":"related"},{"name":"UDP-GlcNAc 4-epimerase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine 4-epimerase activity","type":"related"},{"name":"uridine 5'-diphospho-N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphate N-acetylglucosamine-4-epimerase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine epimerase activity","type":"related"}],"termid":"GO:0003974"}


id: PBO:0027726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_at_high_temperature","termid":"PBO:0027726"}


id: GO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a syncytium, a multi-nucleate and physiologically active aggregation of fused root cells induced by a symbiotic nematode in a plant host. The syncytium exclusively provides the nematode with nourishment during its sedentary life, for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of syncytium involving giant cell for nutrient acquisition","synonyms":[{"name":"formation by organism of syncytium involving giant cell for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of syncytium involving giant cell for nutrient acquisition from host","type":"related"}],"termid":"GO:0052096"}


id: PBO:0046796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor like 2","termid":"PBO:0046796"}


id: PBO:0029218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_rDNA","termid":"PBO:0029218"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: GO:1903700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a caecum over time, from its formation to the mature structure.","definition_xrefs":["ISBN:0-683-40008-8","GOC:TermGenie","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caecum development","synonyms":[{"name":"blind intestine development","type":"related"},{"name":"blindgut development","type":"related"},{"name":"caeca development","type":"narrow"},{"name":"ceca development","type":"narrow"},{"name":"cecum development","type":"exact"},{"name":"intestinum caecum development","type":"related"},{"name":"intestinum crassum caecum development","type":"exact"},{"name":"intestinum crassum cecum development","type":"related"}],"termid":"GO:1903700"}


id: GO:0000048
data:
  {"annotated_genes":["SJAG_04689","SJAG_01413","SJAG_03636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95123,97119,97952],"is_not":false,"summary":null,"term":"GO:0000048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-tRNA(1) + aminoacyl-tRNA(2) = tRNA(1) + peptidylaminoacyl-tRNA(2). This reaction is catalyzed by a ribozyme.","definition_xrefs":["PMID:9242921","PMID:11433365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01413":null,"SJAG_03636":null,"SJAG_04689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0140098","GO:0140101","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"peptidyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.2.12","MetaCyc:PEPTIDYLTRANSFERASE-RXN","Reactome:R-HSA-156912"],"termid":"GO:0000048","terms_by_termid":{"GO:0000048":null}}


id: GO:0102436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-O-methylmyricetin + S-adenosyl-L-methionine = 7,4'-dimethylmyricetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"7-methylmyricetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13911"],"termid":"GO:0102436"}


id: PBO:0057284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 504","termid":"PBO:0057284"}


id: GO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045673"],"synonyms":[{"name":"regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046532"}


id: GO:0102084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-dopa + S-adenosyl-L-methionine = 3-O-methyldopa + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete L-dopa O-methyltransferase activity (obsolete GO:0102084)","termid":"GO:0102084"}


id: PBO:0040533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2 pseudogene 1","termid":"PBO:0040533"}


id: PBO:0059007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monocyte to macrophage differentiation associated","termid":"PBO:0059007"}


id: FYPO:0001829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on gluconate carbon source","synonyms":[{"name":"normal cell population growth on gluconate carbon source","type":"exact"},{"name":"normal vegetative cell population growth on gluconate carbon source","type":"exact"}],"termid":"FYPO:0001829"}


id: PBO:0077344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86A","termid":"PBO:0077344"}


id: PBO:0080701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 5B","termid":"PBO:0080701"}


id: GO:0052604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methyl-6-phytyl-1,4-benzoquinone = delta-tocopherol.","definition_xrefs":["PMID:12213958"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-tocopherol cyclase activity (obsolete GO:0052604)","termid":"GO:0052604"}


id: PBO:0047043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 106 member D, pseudogene","termid":"PBO:0047043"}


id: GO:1901923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sclerotium development.","definition_xrefs":["PMID:21148914","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of sclerotium development","termid":"GO:1901922"},{"relation_name":"negatively_regulates","term_name":"sclerotium development","termid":"GO:1990045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sclerotium development","synonyms":[{"name":"down regulation of sclerotium development","type":"exact"},{"name":"down-regulation of sclerotium development","type":"exact"},{"name":"downregulation of sclerotium development","type":"exact"},{"name":"inhibition of sclerotium development","type":"narrow"}],"termid":"GO:1901923"}


id: PBO:0053486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 461","termid":"PBO:0053486"}


id: PBO:0045832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 22","termid":"PBO:0045832"}


id: SO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 3' UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3_prime_UTR_variant","termid":"SO:0001624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"3 prime UTR truncation","type":"exact"},{"name":"Jannovar:3_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_3_DELETED","type":"exact"}],"termid":"SO:0002015"}


id: GO:1901818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-zeacarotene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00805","GOC:yaf","PMID:3710717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene biosynthetic process","synonyms":[{"name":"beta-zeacarotene anabolism","type":"exact"},{"name":"beta-zeacarotene biosynthesis","type":"exact"},{"name":"beta-zeacarotene formation","type":"exact"},{"name":"beta-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901818"}


id: GO:0048467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower.","definition_xrefs":["PO:0008062","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gynoecium development","synonyms":[{"name":"pistil development","type":"exact"}],"termid":"GO:0048467"}


id: PBO:0047123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 167 member B","termid":"PBO:0047123"}


id: PBO:0074938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 103C","termid":"PBO:0074938"}


id: GO:1903367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fear response.","definition_xrefs":["PMID:8677262","GOC:TermGenie","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"positively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fear response","synonyms":[{"name":"activation of fear response","type":"narrow"},{"name":"activation of physiological fear response","type":"narrow"},{"name":"positive regulation of physiological fear response","type":"exact"},{"name":"up regulation of fear response","type":"exact"},{"name":"up regulation of physiological fear response","type":"exact"},{"name":"up-regulation of fear response","type":"exact"},{"name":"up-regulation of physiological fear response","type":"exact"},{"name":"upregulation of fear response","type":"exact"},{"name":"upregulation of physiological fear response","type":"exact"}],"termid":"GO:1903367"}


id: PBO:0004669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0004669"}


id: PBO:0053675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 858","termid":"PBO:0053675"}


id: PBO:0089253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b","termid":"PBO:0089253"}


id: FYPO:0000333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle begins later than normal. The duration of G1 phase is thus longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"mitotic G1/S phase transition delay","secondary_identifiers":["FYPO:0000480","FYPO:0000396","FYPO:0000543"],"synonyms":[{"name":"G1/S transition delay during mitotic cell cycle","type":"related"},{"name":"cell cycle progression through the G1/S phase transition: delayed","type":"related"},{"name":"delayed cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"delayed mitotic G1 phase progression","type":"related"},{"name":"increased duration of mitotic G1 phase","type":"related"},{"name":"increased duration of mitotic G1 phase during vegetative growth","type":"related"},{"name":"increased duration of mitotic G1 phase progression","type":"related"},{"name":"mitotic G1/S phase transition delay during vegetative growth","type":"exact"},{"name":"mitotic G1/S transition delay","type":"exact"},{"name":"mitotic cell cycle delay at G1/S transition","type":"exact"},{"name":"mitotic cell cycle delay in G1","type":"related"},{"name":"transient cell cycle arrest in mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000333"}


id: GO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process to proline (obsolete GO:0042458)","synonyms":[{"name":"nopaline breakdown to proline","type":"exact"},{"name":"nopaline degradation to proline","type":"exact"}],"termid":"GO:0042458"}


id: GO:1902461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:18672106","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell proliferation","termid":"GO:1902460"},{"relation_name":"is_a","term_name":"negative regulation of stem cell proliferation","termid":"GO:2000647"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"down regulation of MSC proliferation","type":"exact"},{"name":"down regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"down-regulation of MSC proliferation","type":"exact"},{"name":"down-regulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"downregulation of MSC proliferation","type":"exact"},{"name":"downregulation of mesenchymal stem cell proliferation","type":"exact"},{"name":"inhibition of MSC proliferation","type":"narrow"},{"name":"inhibition of mesenchymal stem cell proliferation","type":"narrow"},{"name":"negative regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902461"}


id: GO:1905263
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98398,104355],"is_not":false,"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26653857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic DNA double-strand break formation","termid":"GO:1903343"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"}],"termid":"GO:1905263","terms_by_termid":{"GO:1905263":null}}


id: PBO:0072456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 20","termid":"PBO:0072456"}


id: PBO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Crt10, involved in ribosomal RNA decay","termid":"PBO:0090186"}


id: PBO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4","termid":"PBO:0036516"}


id: GO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of acetylcholine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine uptake","termid":"GO:0051631"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine uptake","termid":"GO:0051630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acetylcholine uptake","synonyms":[{"name":"activation of acetylcholine uptake","type":"narrow"},{"name":"positive regulation of acetylcholine import","type":"exact"},{"name":"stimulation of acetylcholine uptake","type":"narrow"},{"name":"up regulation of acetylcholine uptake","type":"exact"},{"name":"up-regulation of acetylcholine uptake","type":"exact"},{"name":"upregulation of acetylcholine uptake","type":"exact"}],"termid":"GO:0051633"}


id: FYPO:0001754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize lysine or methionine, and therefore requires lysine and methionine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for lysine","termid":"FYPO:0000039"},{"relation_name":"is_a","term_name":"growth auxotrophic for methionine","termid":"FYPO:0000040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for lysine and methionine","synonyms":[{"name":"growth auxotrophic for lysine and methionine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for lysine and methionine during vegetative growth","type":"exact"},{"name":"lysine and methionine auxotrophy","type":"exact"}],"termid":"FYPO:0001754"}


id: GO:0018130
data:
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id: PBO:0067686
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id: GO:1903517
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id: SO:0000779
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id: PBO:0029031
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id: GO:1990542
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id: GO:0072318
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id: PBO:0041394
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id: GO:1990431
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id: PBO:0012004
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id: PBO:0059525
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id: GO:0002757
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id: GO:0031508
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id: GO:0102563
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id: GO:0042792
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id: GO:1901791
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id: PATO:0000325
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id: PBO:0047120
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id: GO:0008443
data:
  {"annotated_genes":["SJAG_02713","SJAG_03336","SJAG_00605","SJAG_02596","SJAG_00039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95966,85041,97394,88906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003873"},{"annotations":[100474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to a phosphofructose substrate molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00605":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphofructokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008443","terms_by_termid":{"GO:0003872":null,"GO:0003873":null}}


id: PBO:0002872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier protein] reductase (predicted)","termid":"PBO:0002872"}


id: PBO:0076370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 7, pseudogene","termid":"PBO:0076370"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: PBO:0003672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc5 (predicted)","termid":"PBO:0003672"}


id: GO:0103027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FMN + H2O = riboflavin + hydrogenphosphate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete FMN phosphatase activity (obsolete GO:0103027)","termid":"GO:0103027"}


id: PBO:0091707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0091707"}


id: PBO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C22","termid":"PBO:0045243"}


id: GO:1904062
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109368,87264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation transmembrane transport.","definition_xrefs":["PMID:15304482","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"regulates","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cation transmembrane transport","type":"broad"}],"termid":"GO:1904062","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PR:Q9P6N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1802 gene.","definition_xrefs":["UniProtKB:Q9P6N1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.16c","synonyms":[{"name":"Spom972h-atg1802","type":"exact"},{"name":"meiotically up-regulated gene 179 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N1"}


id: GO:0120179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an adherens junction into its constituent components. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["PMID:25490267","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction disassembly","termid":"GO:0120179"}


id: GO:1900563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"dehydroaustinol biosynthetic process","synonyms":[{"name":"dehydroaustinol anabolism","type":"exact"},{"name":"dehydroaustinol biosynthesis","type":"exact"},{"name":"dehydroaustinol formation","type":"exact"},{"name":"dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900563"}


id: FYPO:0002062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the growth of a cell is normal (i.e. indistinguishable from wild type). Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell growth","termid":"FYPO:0002062"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: PBO:0057168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320d-2","termid":"PBO:0057168"}


id: PBO:0051266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgA inducing protein","termid":"PBO:0051266"}


id: GO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron in the metanephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"}


id: PBO:0070665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 36","termid":"PBO:0070665"}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: PBO:0044124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 10, pseudogene","termid":"PBO:0044124"}


id: PBO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C2","termid":"PBO:0045206"}


id: GO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + m7G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppRm-RNA. R may be guanosine or adenosine.","definition_xrefs":["EC:2.1.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"mRNA (nucleoside-2'-O-)-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9684030","Reactome:R-HSA-9684032","Reactome:R-HSA-9684033","MetaCyc:2.1.1.57-RXN","Reactome:R-HSA-9694521","Reactome:R-HSA-9694721","Reactome:R-HSA-9694499","Reactome:R-HSA-9834003"],"synonyms":[{"name":"S-adenosyl-L-methionine:mRNA (nucleoside-2'-O-)-methyltransferase activity","type":"related"},{"name":"mRNA (adenosine-2'-O-)-methyltransferase activity","type":"related"},{"name":"messenger RNA (nucleoside-2'-)-methyltransferase activity","type":"related"},{"name":"messenger ribonucleate nucleoside 2'-methyltransferase activity","type":"related"}],"termid":"GO:0004483"}


id: PBO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 27","termid":"PBO:0046646"}


id: GO:0019194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of sorbose from one side of a membrane to the other. Sorbose is the ketohexose xylo-2-hexulose; L-sorbose is formed by bacterial oxidation of sorbitol. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sorbose transmembrane transporter activity","secondary_identifiers":["GO:0019193"],"synonyms":[{"name":"sorbose porter activity","type":"exact"}],"termid":"GO:0019194"}


id: GO:0004577
data:
  {"annotated_genes":["SJAG_04821","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94377,94710],"is_not":false,"summary":null,"term":"GO:0004577"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N''-diacetylchitobiosyldiphosphodolichol.","definition_xrefs":["EC:2.4.1.141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03311":null,"SJAG_04821":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23380","MetaCyc:2.4.1.141-RXN","Reactome:R-HSA-5633241","Reactome:R-HSA-446207"],"synonyms":[{"name":"N,N'-diacetylchitobiosylpyrophosphoryldolichol synthase activity","type":"related"},{"name":"UDP-GlcNAc:dolichyl-pyrophosphoryl-GlcNAc GlcNAc transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-D-glucosaminyl-diphosphodolichol N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichylacetylglucosamine pyrophosphate acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0004577","terms_by_termid":{"GO:0004577":null}}


id: PBO:0064569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP7 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064569"}


id: PBO:0089431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1","termid":"PBO:0089431"}


id: PBO:0083095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-dependent checkpoint protein; required for cell-cycle arrest in G1/S, intra-S, and G2/M, plays a role in postreplication repair (PRR) pathway; transmits checkpoint signal by activating Rad53p and Chk1p; protects double-strand breaks from premature resection; multiple cyclin dependent kinase consensus sites and the C-terminal BRCT domain contribute to DNA damage checkpoint activation; Rad9p Chk1 Activating Domain (CAD) is phosphorylated at multiple sites by Cdc28p/Clb2p","termid":"PBO:0083095"}


id: PBO:0066865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 165","termid":"PBO:0066865"}


id: PBO:0027394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027394"}


id: PR:O14308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc4 gene.","definition_xrefs":["UniProtKB:O14308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.13c","synonyms":[{"name":"Spom972h-swc4","type":"exact"}],"termid":"PR:O14308"}


id: PR:Q10243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 26B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12233:SF1","OMA:SCHPO00942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.13c","secondary_identifiers":["UniProtKB:Q10243"],"synonyms":[{"name":"Spom972h-VPS26B","type":"exact"}],"termid":"PR:Q10243"}


id: FYPO:0003233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003233"}


id: GO:0042699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by follicle-stimulating hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"follicle-stimulating hormone signaling pathway","synonyms":[{"name":"follicle stimulating hormone signaling pathway","type":"exact"},{"name":"follicle stimulating hormone signalling pathway","type":"exact"},{"name":"follicle-stimulating hormone signalling pathway","type":"exact"}],"termid":"GO:0042699"}


id: PBO:0017735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1","termid":"PBO:0017735"}


id: GO:0038140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptors ERBB4 (also called HER4) and ERBB3 (also called HER3). ERBB3 has impaired kinase activity so relies on the kinase activity of its heterodimer partner for activation and signal transmission.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"ERBB4-ERBB3 complex","synonyms":[{"name":"ERBB3-ERBB4 complex","type":"exact"},{"name":"ERBB4:ERBB3 heterodimer","type":"exact"}],"termid":"GO:0038140"}


id: PBO:0004197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Aps2 (predicted)","termid":"PBO:0004197"}


id: PBO:0054391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1787","termid":"PBO:0054391"}


id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: GO:0052850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrocurcumin + NADPH+ + H+ = tetrahydrocurcumin + NADP+.","definition_xrefs":["MetaCyc:RXN0-6677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-dependent dihydrocurcumin reductase activity","synonyms":[{"name":"dihydrocurcumin reductase (NADPH) activity","type":"exact"}],"termid":"GO:0052850"}


id: GO:0004571
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66050,91757],"is_not":false,"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["PMID:25092655","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9036008","Reactome:R-HSA-9036011","Reactome:R-HSA-964825","Reactome:R-HSA-901036","Reactome:R-HSA-901039","KEGG_REACTION:R12479","Reactome:R-HSA-9036012","Reactome:R-HSA-964830","Reactome:R-HSA-6782685","Reactome:R-HSA-964737","Reactome:R-HSA-9696807","Reactome:R-HSA-901024","Reactome:R-HSA-4793949","EC:3.2.1.113","Reactome:R-HSA-901074"],"synonyms":[{"name":"1,2-alpha-mannosidase","type":"related"},{"name":"1,2-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"Man9-mannosidase activity","type":"narrow"},{"name":"ManI activity","type":"narrow"},{"name":"exo-alpha-1,2-mannanase activity","type":"related"},{"name":"glycoprotein processing mannosidase I","type":"related"},{"name":"mannose-9 processing alpha-mannosidase activity","type":"narrow"},{"name":"mannosidase 1A activity","type":"narrow"},{"name":"mannosidase 1B activity","type":"narrow"},{"name":"mannosidase I","type":"related"}],"termid":"GO:0004571","terms_by_termid":{"GO:0004571":null}}


id: PBO:0073290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 12","termid":"PBO:0073290"}


id: PBO:0070843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 22","termid":"PBO:0070843"}


id: GO:0015284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).","definition_xrefs":["TC:2.A.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose uniporter activity","secondary_identifiers":["RHEA:60372"],"termid":"GO:0015284"}


id: PBO:0089938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane phospholipid-translocating ATPase complex Lem3 family subunit Ivn1","termid":"PBO:0089938"}


id: PBO:0061621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 5","termid":"PBO:0061621"}


id: FYPO:0004928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"fragmented DNA during vegetative growth","synonyms":[{"name":"DNA fragmentation during vegetative growth","type":"exact"},{"name":"fragmented DNA during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during vegetative growth","type":"related"}],"termid":"FYPO:0004928"}


id: PR:O13980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu29 gene.","definition_xrefs":["UniProtKB:O13980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.05","synonyms":[{"name":"Spom972h-meu29","type":"exact"}],"termid":"PR:O13980"}


id: PBO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 5","termid":"PBO:0052156"}


id: GO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process associated with progression of the cell from its inception to the end of its lifespan that occurs when the cell is in a non-dividing, or quiescent, state.","definition_xrefs":["PMID:12044934","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete chronological cell aging (obsolete GO:0001300)","synonyms":[{"name":"chronological cell ageing","type":"exact"}],"termid":"GO:0001300"}


id: PBO:0087082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L42B; required for propagation of the killer toxin-encoding M1 double-stranded RNA satellite of the L-A double-stranded RNA virus; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42B has a paralog, RPL42A, that arose from the whole genome duplication","termid":"PBO:0087082"}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_03563","SJAG_00426","SJAG_01233","SJAG_00168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102203,115535,109026,99017,110680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: PATO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Handedness where the organism preferentially uses the right hand or foot for tasks requiring the use of a single hand or foot or a dominant hand or foot.","definition_xrefs":["birnlex:2184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"handedness","termid":"PATO:0002201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right handedness","termid":"PATO:0002203"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: PBO:0084776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication","termid":"PBO:0084776"}


id: GO:0036169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methoxy-4-hydroxy-5-decaprenylbenzoic acid -> 2-methoxy-6-decaprenylphenol + CO2.","definition_xrefs":["PMID:620805","PMID:7028108","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-methoxy-4-hydroxy-5-decaprenylbenzoic acid decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-2162195"],"termid":"GO:0036169"}


id: PBO:0090178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A","termid":"PBO:0090178"}


id: PBO:0084453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Csh1p; SUR1 has a paralog, CSH1, that arose from the whole genome duplication","termid":"PBO:0084453"}


id: PBO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 27","termid":"PBO:0071524"}


id: PR:O59675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps902 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.12","synonyms":[{"name":"Spom972h-rps902","type":"exact"}],"termid":"PR:O59675"}


id: PBO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Reg1 (predicted)","termid":"PBO:0000423"}


id: GO:0170050
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a box C/D type snoRNA and three (Archaea) or four (Eukaryotes) core proteins that is capable of methylation of target RNAs.","definition_xrefs":["PMID:30254138","PMID:28505386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box C/D methylation guide RNP complex","termid":"GO:0170050"}


id: GO:0032541
data:
  {"annotated_genes":["SJAG_03795","SJAG_01460","SJAG_02019","SJAG_00790","SJAG_03162","SJAG_04417","SJAG_00261","SJAG_04413","SJAG_00175","SJAG_03943","SJAG_01006","SJAG_04059","SJAG_01168","SJAG_03718","SJAG_03247","SJAG_03609","SJAG_04049","SJAG_03170","SJAG_00355","SJAG_02683","SJAG_00825","SJAG_01848","SJAG_03750","SJAG_00053","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84544,84834,86461,87527,89707,90288,91365,91725,97493,99463,100377,102316,103390,104637,105623,107664,108060,110183,110404,112225,114577,114668,114862,114930,115571,115572],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[89127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099021"}]},"cv_name":"cellular_component","definition":"A cortical network of highly dynamic tubules that are juxtaposed to the plasma membrane and undergo ring closure and tubule-branching movements.","definition_xrefs":["PMID:17686782","GOC:se","PMID:10931860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network","termid":"GO:0071782"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00175":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01006":null,"SJAG_01168":null,"SJAG_01329":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_02019":null,"SJAG_02683":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03609":null,"SJAG_03718":null,"SJAG_03750":null,"SJAG_03795":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783","GO:0005938"],"is_obsolete":false,"name":"cortical endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null,"PMID:33495454":null},"synonyms":[{"name":"ER-PM peripheral junction","type":"broad"},{"name":"cortical ER","type":"exact"},{"name":"peripheral ER","type":"related"},{"name":"peripheral endoplasmic reticulum","type":"related"}],"termid":"GO:0032541","terms_by_termid":{"GO:0032541":null,"GO:0099021":null}}


id: GO:0016659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, a heme protein, NAD, NADP, a nitrogenous group, a quinone or similar compound or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on NADH or NADPH, other acceptor (obsolete GO:0016659)","synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, other acceptor","type":"exact"}],"termid":"GO:0016659"}


id: FYPO:0001289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is lower than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased phospholipid level","synonyms":[{"name":"decreased cellular phospholipid level","type":"exact"},{"name":"decreased phospholipid accumulation","type":"related"},{"name":"decreased phospholipid level during mitotic cell cycle","type":"related"},{"name":"decreased phospholipid level during vegetative growth","type":"exact"},{"name":"reduced phospholipid level","type":"exact"}],"termid":"FYPO:0001289"}


id: PBO:0082736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate","termid":"PBO:0082736"}


id: RO:0002576
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has skeleton","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeleton_of","termid":"RO:0002576"}


id: GO:0045761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adenylate cyclase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclase activity","termid":"GO:0031279"},{"relation_name":"is_a","term_name":"regulation of lyase activity","termid":"GO:0051339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase activity","synonyms":[{"name":"adenylate cyclase regulator","type":"related"},{"name":"regulation of adenylyl cyclase activity","type":"exact"}],"termid":"GO:0045761"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: PBO:0053119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 9","termid":"PBO:0053119"}


id: PBO:0065052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 6","termid":"PBO:0065052"}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","PMID:22588719","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: PBO:0081725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 653","termid":"PBO:0081725"}


id: PR:O74352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bridging integrator 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein hob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.12","secondary_identifiers":["UniProtKB:O74352"],"synonyms":[{"name":"Spom972h-BIN2","type":"exact"},{"name":"homolog of Bin1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74352"}


id: PBO:0041919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 3","termid":"PBO:0041919"}


id: GO:0071192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP1 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Kv4.2-KChIP1 channel complex","secondary_identifiers":["CORUM:606"],"termid":"GO:0071192"}


id: GO:0046663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a leading edge cell, the dorsal-most cells of the epidermis that migrates during dorsal closure.","definition_xrefs":["GOC:ai","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell differentiation","termid":"GO:0035026"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell differentiation","termid":"GO:0046663"}


id: GO:0032339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inhibin secretion","termid":"GO:0032338"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inhibin secretion","synonyms":[{"name":"downregulation of inhibin secretion","type":"exact"},{"name":"down regulation of inhibin secretion","type":"exact"},{"name":"down-regulation of inhibin secretion","type":"exact"},{"name":"inhibition of inhibin secretion","type":"narrow"}],"termid":"GO:0032339"}


id: PBO:0039232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 1","termid":"PBO:0039232"}


id: PBO:0076466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TWIST1 associated long noncoding RNA regulated by androgen receptor","termid":"PBO:0076466"}


id: GO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The desulfurization of peptidyl-L-cysteine to yield L-alanine and elemental sulfur; peptidyl-L-cysteine persulfide is an intermediate.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine desulfurization (obsolete GO:0018179)","synonyms":[{"name":"peptidyl-cysteine desulfurization","type":"exact"},{"name":"peptidyl-cysteine desulphurization","type":"exact"}],"termid":"GO:0018179"}


id: PBO:0044001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUB and Sushi multiple domains 1","termid":"PBO:0044001"}


id: GO:0006425
data:
  {"annotated_genes":["SJAG_04482"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105293],"is_not":false,"summary":null,"term":"GO:0006425"}]},"cv_name":"biological_process","definition":"The process of coupling glutamine to glutaminyl-tRNA, catalyzed by glutaminyl-tRNA synthetase. The glutaminyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04482":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"glutaminyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006425","terms_by_termid":{"GO:0006425":null}}


id: PR:Q9USJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.07","synonyms":[{"name":"Spom972h-nro1","type":"exact"}],"termid":"PR:Q9USJ7"}


id: PBO:0056687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 8","termid":"PBO:0056687"}


id: FYPO:0003925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is decreased in regions where RNA polymerase II actively transcribes genes.","definition_xrefs":["PMID:22426534","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic DNA replication elongation","termid":"FYPO:0003923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes","synonyms":[{"name":"decreased rate of DNA replication elongation at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased rate of DNA strand elongation at highly transcribed RNA polymerase II genes involved in mitotic DNA replication","type":"exact"},{"name":"decreased rate of DNA strand elongation at highly transcribed RNA polymerase II genes involved in nuclear cell cycle DNA replication","type":"exact"},{"name":"decreased rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"reduced rate of mitotic DNA replication elongation at highly transcribed RNA polymerase II genes","type":"exact"}],"termid":"FYPO:0003925"}


id: PBO:0070729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10","termid":"PBO:0070729"}


id: GO:0033598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of mammary gland epithelial cells, resulting in the expansion of a cell population. Mammary gland epithelial cells make up the covering of surfaces of the mammary gland. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell proliferation","termid":"GO:0033598"}


id: PBO:0074443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 44","termid":"PBO:0074443"}


id: PBO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil DNA N-glycosylase Ung1","termid":"PBO:0005212"}


id: PBO:0048339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 50","termid":"PBO:0048339"}


id: SO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a cyanelle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_chromosome","synonyms":[{"name":"cyanelle chromosome","type":"exact"}],"termid":"SO:0000822"}


id: GO:0044446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular organelle part (obsolete GO:0044446)","termid":"GO:0044446"}


id: PBO:0076360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ RNA binding domain containing 1","termid":"PBO:0076360"}


id: PBO:0078001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 2","termid":"PBO:0078001"}


id: PBO:0084045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein beta subunit and guanine dissociation inhibitor for Gpa2p; ortholog of RACK1 that inhibits translation; core component of the small (40S) ribosomal subunit; required to prevent frameshifting at ribosomes stalled at repeated CGA codons; regulates P-body formation induced by replication stress; represses Gcn4p in the absence of amino acid starvation; controls phosphorylation of multiple proteins","termid":"PBO:0084045"}


id: PBO:0062153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 3 pseudogene","termid":"PBO:0062153"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: PBO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 5","termid":"PBO:0061114"}


id: GO:0140808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosyl-[protein] + NAD+ = H+ + nicotinamide + O-(ADP-D-ribosyl)-L-tyrosyl-[protein].","definition_xrefs":["PMID:30257210","RHEA:58236","PMID:29954836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"NAD+-protein-tyrosine ADP-ribosyltransferase activity","termid":"GO:0140808"}


id: FYPO:0005674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is higher than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of ubiquitinated protein in cell during vegetative growth","termid":"FYPO:0002774"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0005333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005674"}


id: FYPO:0000449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to centromere during vegetative growth","synonyms":[{"name":"abnormal protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abnormal protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during vegetative growth","type":"exact"}],"termid":"FYPO:0000449"}


id: PBO:0085725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the initiation of DNA replication; required for proper assembly of replication proteins at the origins of replication; interacts with the DDK-phosphorylated MCM complex and required for the recruitment of Cdc45p; localizes to nuclear foci that become diffuse upon DNA replication stress; homologous to the human Treslin/Ticrr protein","termid":"PBO:0085725"}


id: PBO:0067696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 4","termid":"PBO:0067696"}


id: FYPO:0000744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to actin cortical patch","synonyms":[{"name":"normal protein localisation to actin cortical patch","type":"exact"},{"name":"normal protein localization to F-actin patch","type":"exact"},{"name":"normal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"normal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000744"}


id: GO:0044628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of complement activation, classical pathway in another organism (obsolete GO:0044628)","synonyms":[{"name":"positive regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044628"}


id: PBO:0038546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 17A, depalmitoylase","termid":"PBO:0038546"}


id: SO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000369 integrase_coding_region (obsolete SO:0000369)","termid":"SO:0000369"}


id: SO:1000030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal mutation where a region of the chromosome is inverted with respect to wild type.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_inversion","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_inversion"],"synonyms":[{"name":"(Drosophila)In","type":"related"},{"name":"(bacteria)IN","type":"related"},{"name":"(fungi)In","type":"related"},{"name":"chromosomal inversion","type":"exact"}],"termid":"SO:1000030"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0030006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0030006"}


id: PR:Q10244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.14","secondary_identifiers":["UniProtKB:Q10244"],"synonyms":[{"name":"Spom972h-PXMP2","type":"exact"}],"termid":"PR:Q10244"}


id: GO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic (S)-hydroxynitrile = an aromatic aldehyde + cyanide.","definition_xrefs":["RHEA:54660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"aromatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11732","KEGG_REACTION:R09359"],"termid":"GO:0052892"}


id: GO:0021598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the abducens nerve is generated and organized. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve morphogenesis","synonyms":[{"name":"CN VI development","type":"related"}],"termid":"GO:0021598"}


id: GO:0034944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA + NAD+ = 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + NADH+ + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2,6-dimethyl-5-methylene-heptanoyl-CoA dehydrogenase activity (obsolete GO:0034944)","termid":"GO:0034944"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: SO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that is found only by individuals that belong to the same pedigree.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedigree_specific_variant","synonyms":[{"name":"pedigree specific variant","type":"exact"}],"termid":"SO:0001779"}


id: PBO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein","termid":"PBO:0000137"}


id: GO:0048633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle tissue growth","synonyms":[{"name":"activation of skeletal muscle growth","type":"narrow"},{"name":"stimulation of skeletal muscle growth","type":"narrow"},{"name":"up regulation of skeletal muscle growth","type":"exact"},{"name":"up-regulation of skeletal muscle growth","type":"exact"},{"name":"upregulation of skeletal muscle growth","type":"exact"}],"termid":"GO:0048633"}


id: PBO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 3","termid":"PBO:0060695"}


id: GO:0022024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by the binding of a member of the BMP (bone morphogenetic protein) family to a receptor on the surface of a target cell, which contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0022024)","synonyms":[{"name":"BMP signalling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"bone morphogenetic protein signaling pathway involved in forebrain neuron fate commitment","type":"exact"},{"name":"bone morphogenetic protein signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022024"}


id: FYPO:0006569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal DNA repair","synonyms":[{"name":"normal DNA repair during mitotic cell cycle","type":"related"},{"name":"normal DNA repair during vegetative growth","type":"exact"}],"termid":"FYPO:0006569"}


id: PBO:0051936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2 inducible T cell kinase","termid":"PBO:0051936"}


id: PBO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asymmetric_protein_localization_to_old_or_new_mitotic_spindle_pole_body_during_anaphase,_with_protein_symmetrically_localized_to_both_spindle_pole_bodies","termid":"PBO:0030021"}


id: GO:2000967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"negatively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"negative regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000967"}


id: FYPO:0001226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus and an asymmetrically located septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0007652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","synonyms":[{"name":"inviable mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum location","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum position","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetric septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetrically located septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalised septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"lethal; mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001226"}


id: MOD:00473
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11746907","Unimod:95","URL:http://dx.doi.org/10.1002/rcm.517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d4","synonyms":[{"name":"IMID d4","type":"related"},{"name":"IMID:2H(4)","type":"related"}],"termid":"MOD:00473"}


id: PBO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1","termid":"PBO:0051645"}


id: GO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which mitochondrial RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial RNA localization","synonyms":[{"name":"establishment and maintenance of mitochondrial RNA localization","type":"exact"},{"name":"mitochondrial RNA localisation","type":"exact"},{"name":"mtRNA localization","type":"exact"}],"termid":"GO:0019093"}


id: GO:0046401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues. The structure of this core oligosaccharide appears to be similar in closely related bacterial strains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"part_of","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide core region metabolic process","synonyms":[{"name":"LPS core region metabolic process","type":"exact"},{"name":"lipopolysaccharide core region metabolism","type":"exact"}],"termid":"GO:0046401"}


id: GO:0140569
data:
  {"annotated_genes":["SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97038],"is_not":false,"summary":null,"term":"GO:0140569"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from the endoplasmic reticulum (ER) membrane.","definition_xrefs":["PMID:32973005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraction of mislocalized protein from membrane","termid":"GO:0140568"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"extraction of mislocalized protein from ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140569","terms_by_termid":{"GO:0140569":null}}


id: PR:O13706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpz2 gene.","definition_xrefs":["UniProtKB:O13706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP-type zinc finger-containing protein C13F5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.07c","synonyms":[{"name":"Spom972h-hpz2","type":"exact"}],"termid":"PR:O13706"}


id: PBO:0045305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMBP antisense RNA 1","termid":"PBO:0045305"}


id: GO:0072678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a T cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:BHF","GOC:mah","CL:0000084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell migration","synonyms":[{"name":"T lymphocyte migration","type":"exact"},{"name":"T-cell migration","type":"exact"},{"name":"T-lymphocyte migration","type":"exact"}],"termid":"GO:0072678"}


id: PBO:0005193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone (predicted)","termid":"PBO:0005193"}


id: PBO:0027432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_tRNA_locus","termid":"PBO:0027432"}


id: PBO:0040797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member a15","termid":"PBO:0040797"}


id: GO:0022402
data:
  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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 12","termid":"PBO:0050750"}


id: PBO:0055223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2649","termid":"PBO:0055223"}


id: GO:0072021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ascending thin limb over time, from its formation to the mature structure. The ascending thin limb is a segment of a nephron tubule lying in the inner medulla that is permeable to ions but not to water and has a simple epithelium; active transepithelial solute transport is absent.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending thin limb development","termid":"GO:0072021"}


id: PBO:0055182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2606","termid":"PBO:0055182"}


id: PBO:0016921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug116","termid":"PBO:0016921"}


id: GO:0022851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when GABA has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0038023","GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"GABA-gated chloride ion channel activity","termid":"GO:0022851"}


id: PATO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation emitting quality which obtains by the intensity of the bearer emitted radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation emitting quality","termid":"PATO:0001299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation emitting intensity quality","termid":"PATO:0001717"}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: GO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a pseudopodium by rearrangement of the actin cytoskeleton and overlying membrane.","definition_xrefs":["GOC:pg","GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium organization","termid":"GO:0031268"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pseudopodium assembly","synonyms":[{"name":"pseudopodium extension","type":"exact"},{"name":"pseudopodium formation","type":"related"}],"termid":"GO:0031269"}


id: PBO:0069081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 328, pseudogene","termid":"PBO:0069081"}


id: PBO:0064010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 44","termid":"PBO:0064010"}


id: GO:1905867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epididymis over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:12388089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epididymis development","synonyms":[{"name":"epididymus development","type":"exact"}],"termid":"GO:1905867"}


id: FYPO:0007654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PMID:32269268","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007654"}


id: GO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of FasL production","termid":"GO:0045219"},{"relation_name":"positively_regulates","term_name":"FasL biosynthetic process","termid":"GO:0045210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of FasL production","synonyms":[{"name":"activation of FasL biosynthetic process","type":"narrow"},{"name":"positive regulation of FasL anabolism","type":"exact"},{"name":"positive regulation of FasL biosynthesis","type":"exact"},{"name":"positive regulation of FasL biosynthetic process","type":"exact"},{"name":"positive regulation of FasL formation","type":"exact"},{"name":"positive regulation of FasL synthesis","type":"exact"},{"name":"stimulation of FasL biosynthetic process","type":"narrow"},{"name":"up regulation of FasL biosynthetic process","type":"exact"},{"name":"up-regulation of FasL biosynthetic process","type":"exact"},{"name":"upregulation of FasL biosynthetic process","type":"exact"}],"termid":"GO:0045220"}


id: PBO:0087626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo; capable of binding Q/N rich proteins and mediating their folding","termid":"PBO:0087626"}


id: GO:0072007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"pericyte cell differentiation","termid":"GO:1904238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell differentiation","termid":"GO:0072007"}


id: PBO:0085645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor","termid":"PBO:0085645"}


id: GO:1990533
data:
  {"annotated_genes":["SJAG_04283","SJAG_02601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103173,112029],"is_not":false,"summary":null,"term":"GO:1990533"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of one subunit known as Dom34 or Pelota that has similarity to translation termination factor eRF1, and another subunit, Hbs1, that is a GTPase with similarity to translation termination factor eRF3. The Dom34-Hbs1 complex has a role in cotranslational mRNA quality control by promoting ribosomal subunit dissociation and peptidyl-tRNA release when translation is stalled, facilitating no-go decay and nonstop decay.","definition_xrefs":["PMID:20890290","PMID:21448132","PMID:22503425","GOC:mcc","PMID:21102444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02601":null,"SJAG_04283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Dom34-Hbs1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dom34:Hbs1 complex","type":"exact"}],"termid":"GO:1990533","terms_by_termid":{"GO:1990533":null}}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_04065","SJAG_02978","SJAG_00088","SJAG_01054","SJAG_03572","SJAG_04754","SJAG_01172","SJAG_00319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87256,110302,113181],"is_not":false,"summary":null,"term":"GO:0009982"},{"annotations":[110304,102227,91402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[108491,110305,90708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[102228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[98514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["GOC:mah","RHEA:48348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787566","Reactome:R-HSA-8870289","GO:0016439","Reactome:R-HSA-6782381","Reactome:R-HSA-6786583","Reactome:R-HSA-6790905"],"termid":"GO:0009982","terms_by_termid":{"GO:0009982":null,"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null}}


id: PBO:0038396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_in_presence_of","termid":"PBO:0038396"}


id: GO:1901821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-zeacarotene.","definition_xrefs":["PMID:6060456","UniPathway:UPA00804","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-zeacarotene biosynthetic process","synonyms":[{"name":"alpha-zeacarotene anabolism","type":"exact"},{"name":"alpha-zeacarotene biosynthesis","type":"exact"},{"name":"alpha-zeacarotene formation","type":"exact"},{"name":"alpha-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901821"}


id: PR:Q9Y705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alp4 gene.","definition_xrefs":["UniProtKB:Q9Y705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body component alp4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.15","synonyms":[{"name":"Spom972h-alp4","type":"exact"},{"name":"altered polarity protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y705"}


id: PR:O94687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tas3 gene.","definition_xrefs":["UniProtKB:O94687","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-induced transcriptional silencing complex protein tas3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.03c","synonyms":[{"name":"RITS protein tas3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tas3","type":"exact"}],"termid":"PR:O94687"}


id: PBO:0078088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 5","termid":"PBO:0078088"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: PBO:0084084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA1 has a paralog, GEA2, that arose from the whole genome duplication","termid":"PBO:0084084"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: GO:2000131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"regulates","term_name":"tyramine signaling pathway","termid":"GO:0071928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of tyramine signaling pathway","synonyms":[{"name":"regulation of tyramine signalling pathway","type":"exact"}],"termid":"GO:2000131"}


id: PBO:0059278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37","termid":"PBO:0059278"}


id: GO:0016341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other collagen (obsolete GO:0016341)","synonyms":[{"name":"other collagen","type":"exact"}],"termid":"GO:0016341"}


id: FYPO:0005491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of protein localization in vacuole occurs to a lower extent than normal, and some of the protein is secreted, i.e. some of a protein that normally resides in the vacuole is instead secreted.","definition_xrefs":["PMID:22484924","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased maintenance of protein localization in vacuole, with protein secreted","synonyms":[{"name":"decreased maintenance of protein localisation in vacuole, with protein secreted","type":"exact"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during mitotic cell cycle","type":"related"},{"name":"decreased maintenance of protein localization in vacuole, with protein secreted, during vegetative growth","type":"exact"},{"name":"protein partially mislocalized from vacuole to extracellular region","type":"related"},{"name":"reduced maintenance of protein localization in vacuole, with protein secreted","type":"exact"}],"termid":"FYPO:0005491"}


id: GO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of blood vessel endothelial cells, resulting in the expansion of a cell population contributing to sprouting angiogenesis.","definition_xrefs":["GOC:dph","GOC:tb","PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell proliferation","termid":"GO:0001935"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:0002043"}


id: GO:0044109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, occurring at the level of the individual cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol catabolic process (obsolete GO:0044109)","termid":"GO:0044109"}


id: PBO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 3","termid":"PBO:0045548"}


id: PBO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 5","termid":"PBO:0043245"}


id: PBO:0026881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_production_of_siRNA_involved_in_chromatin_silencing_by_small_RNA","termid":"PBO:0026881"}


id: GO:0035502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of the portion of the ureteric bud tube that contributes to the morphogenesis of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric part of ureteric bud development","termid":"GO:0035502"}


id: SO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide that acts as a signal for both membrane translocation and lipid attachment in prokaryotes.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lipoprotein_signal_peptide","synonyms":[{"name":"lipoprotein signal peptide","type":"exact"},{"name":"prokaryotic membrane lipoprotein lipid attachment site","type":"exact"}],"termid":"SO:0100009"}


id: PBO:0062853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otogelin","termid":"PBO:0062853"}


id: PBO:0066652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 interactor 1","termid":"PBO:0066652"}


id: GO:0006075
data:
  {"annotated_genes":["SJAG_01787","SJAG_01290","SJAG_03705","SJAG_01288","SJAG_03587","SJAG_04483","SJAG_04462","SJAG_05285","SJAG_04668","SJAG_02222","SJAG_04771","SJAG_00610","SJAG_01835","SJAG_04666","SJAG_00876","SJAG_00218"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[109171,102097,87640,84145,87629,111820,105300,103777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[88459],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83595,88463],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[86827,98861,101340,113903,88465,88448],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan metabolic process","termid":"GO:0006074"},{"relation_name":"is_a","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"1,3-beta-glucan anabolism","type":"exact"},{"name":"1,3-beta-glucan biosynthesis","type":"exact"},{"name":"1,3-beta-glucan formation","type":"exact"},{"name":"1,3-beta-glucan synthesis","type":"exact"},{"name":"beta-1,3 glucan anabolism","type":"exact"},{"name":"beta-1,3 glucan biosynthesis","type":"exact"},{"name":"beta-1,3 glucan biosynthetic process","type":"exact"},{"name":"beta-1,3 glucan formation","type":"exact"},{"name":"beta-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0006075","terms_by_termid":{"GO:0034413":null,"GO:0060635":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase involved in endocytosis Cki1","termid":"PBO:0036484"}


id: PBO:0040630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated protein 1","termid":"PBO:0040630"}


id: PBO:0041980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 24","termid":"PBO:0041980"}


id: PR:O14322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug100 gene.","definition_xrefs":["UniProtKB:O14322","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 100 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.07","synonyms":[{"name":"Spom972h-mug100","type":"exact"}],"termid":"PR:O14322"}


id: FYPO:0000535
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body localization is normal (i.e. indistinguishable from wild type). Spindle pole body localization is the process in which a whole spindle pole body is transported to, or maintained in, a specific location.","definition_xrefs":["PomBase:mah","GO:0070631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle pole body localization","synonyms":[{"name":"normal mitotic SPB localization","type":"exact"},{"name":"normal mitotic spindle pole body localisation","type":"exact"},{"name":"normal position of mitotic spindle pole body","type":"related"},{"name":"normal spindle pole body localization during mitotic cell cycle","type":"related"},{"name":"normal spindle pole body localization during vegetative growth","type":"exact"},{"name":"position of spindle pole body: normal","type":"related"}],"termid":"FYPO:0000535"}


id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: SO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC","secondary_identifiers":["http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"],"synonyms":[{"name":"P1","type":"exact"},{"name":"P1 artificial chromosome","type":"exact"}],"termid":"SO:0000154"}


id: FYPO:0002739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a meiotic cell cycle process normally. A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}


id: PBO:0017091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 6","termid":"PBO:0017091"}


id: GO:1990481
data:
  {"annotated_genes":["SJAG_00319","SJAG_02978","SJAG_04754","SJAG_04065","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90705,91397,98511,108488,110299],"is_not":false,"summary":null,"term":"GO:1990481"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an mRNA molecule.","definition_xrefs":["PMID:25192136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"},{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_02978":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA pseudouridylation","type":"exact"}],"termid":"GO:1990481","terms_by_termid":{"GO:1990481":null}}


id: PBO:0043414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated 5","termid":"PBO:0043414"}


id: GO:0030081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 820 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:lr","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0032991"],"is_obsolete":false,"name":"B800-820 antenna complex","synonyms":[{"name":"LH3 complex","type":"exact"},{"name":"light harvesting complex III","type":"exact"}],"termid":"GO:0030081"}


id: PBO:0077957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 13-1","termid":"PBO:0077957"}


id: GO:0010362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which blue light stops, prevents, or reduces the frequency, rate, or extent of the anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of anion channel activity","termid":"GO:0010360"},{"relation_name":"is_a","term_name":"regulation of anion channel activity by blue light","termid":"GO:0010361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of anion channel activity by blue light","synonyms":[{"name":"inhibition by blue light of anion channel activity","type":"narrow"},{"name":"negative regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010362"}


id: PBO:0081890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 840, pseudogene","termid":"PBO:0081890"}


id: PR:O94510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- agn2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase agn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.06c","synonyms":[{"name":"Spom972h-agn2","type":"exact"},{"name":"endo-1,3-alpha-glucanase agn2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94510"}


id: GO:0016617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-proline + NAD+ = 4-oxoproline + NADH + H+.","definition_xrefs":["EC:1.1.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-oxoproline reductase activity","secondary_identifiers":["RHEA:13601","MetaCyc:4-OXOPROLINE-REDUCTASE-RXN"],"synonyms":[{"name":"4-hydroxy-L-proline:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxy-L-proline oxidase activity","type":"exact"},{"name":"hydroxyproline oxidase activity","type":"related"}],"termid":"GO:0016617"}


id: GO:0044297
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell body","secondary_identifiers":["Wikipedia:Cell_body","FBbt:00005107","FMA:67301"],"synonyms":[{"name":"cell soma","type":"exact"}],"termid":"GO:0044297"}


id: GO:0051804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051804)","synonyms":[{"name":"activation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"positive regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"positive regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"},{"name":"stimulation of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"up regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"up-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"},{"name":"upregulation of cytolysis of cells in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0051804"}


id: GO:0071919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the formation of G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad or G-quartet. The stacking of several layers of G-quartets forms G-quadruplexes, in which one or more DNA single strands are assembled in parallel and/or antiparallel, with interactions that can be either intra- or intermolecular in nature.","definition_xrefs":["PMID:20098422","GOC:sre"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"G-quadruplex DNA formation","synonyms":[{"name":"G quadruplex DNA formation","type":"exact"},{"name":"G quartet DNA formation","type":"exact"},{"name":"G-quartet DNA formation","type":"exact"}],"termid":"GO:0071919"}


id: GO:0010737
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97871],"is_not":false,"summary":null,"term":"GO:0010737"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of protein kinase A (PKA), and ends with the regulation of a downstream cellular process, e.g. transcription. The PKA catalytic subunit (PKA-C) is normally present in a complex with its regulatory subunit, PKA-R. The inhibitory action of PKA-R is released upon cAMP binding, which results in the activation of PKA-C.","definition_xrefs":["PMID:36431013","PMID:35252178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"protein kinase A signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PKA signaling cascade","type":"related"},{"name":"protein kinase A signal transduction","type":"exact"},{"name":"protein kinase A signaling cascade","type":"related"},{"name":"protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010737","terms_by_termid":{"GO:0010737":null}}


id: GO:0021774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a ligand to a retinoic acid receptor in a precursor cell in the ventral spinal cord that contributes to the commitment of the precursor cell to an interneuron fate.","definition_xrefs":["PMID:11262869","GOC:dgh","GOC:tb","GOC:dph","GOC:jid","GOC:sdb_2009","GOC:cls","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in ventral spinal cord interneuron specification (obsolete GO:0021774)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in ventral spinal cord interneuron specification","type":"exact"}],"termid":"GO:0021774"}


id: PBO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae XRN1","termid":"PBO:0016060"}


id: PBO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"k(cat)/ K(m)m 4.3x10(7) M(-1) min(-1)","termid":"PBO:0004063"}


id: FYPO:0005685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to cadmium ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to cadmium ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to cadmium ion","type":"related"},{"name":"decreased RNA level during cellular response to cadmium","type":"exact"},{"name":"decreased RNA level during cellular response to cadmium ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to cadmium ion during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to cadmium ion","type":"exact"},{"name":"reduced RNA level during cellular response to cadmium ion","type":"exact"}],"termid":"FYPO:0005685"}


id: MOD:00869
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-alanine.","definition_xrefs":["RESID:AA0001#ASP","PubMed:17138938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine residue","termid":"MOD:00010"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine residue (Asp)","synonyms":[{"name":"(2S)-2-aminopropanoic acid","type":"exact"},{"name":"2-aminopropionic acid","type":"exact"},{"name":"2-azanylpropanoic acid","type":"exact"},{"name":"Asp(Ala)","type":"exact"},{"name":"L-alanine","type":"exact"},{"name":"MOD_RES Beta-decarboxylated aspartate","type":"exact"},{"name":"alpha-alanine","type":"exact"},{"name":"alpha-aminopropionic acid","type":"exact"}],"termid":"MOD:00869"}


id: GO:2000432
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"negatively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000432","terms_by_termid":{"GO:1903500":null}}


id: GO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lead (Pb) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lead ion transport","termid":"GO:0015692"}


id: GO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process observed in bacteria and filamentous fungi and leading to spontaneous death by lysis. Examples are lysis of the mother cell during sporulation of Bacillus subtilis and self-degradation of fungal cells in Aspergillus nidulans. Autolysis is also involved in bacterial biofilm formation.","definition_xrefs":["PMID:19286987","GOC:add","GOC:jh2","GOC:mtg_apoptosis","PMID:10974124","PMID:26811896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autolysis","secondary_identifiers":["Wikipedia:Autolysis"],"termid":"GO:0001896"}


id: GO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-13,14-dihydroretinol + A = all-trans-retinol + AH(2). Note that this reaction has only been observed to occur in the opposite direction.","definition_xrefs":["RHEA:19193","EC:1.3.99.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinol 13,14-reductase activity","secondary_identifiers":["KEGG_REACTION:R07163","MetaCyc:1.3.99.23-RXN","Reactome:R-HSA-8956427"],"synonyms":[{"name":"(13,14)-all-trans-retinol saturase activity","type":"exact"},{"name":"RetSat activity","type":"related"},{"name":"all-trans-13,14-dihydroretinol:acceptor 13,14-oxidoreductase activity","type":"exact"},{"name":"all-trans-retinol:all-trans-13,14-dihydroretinol saturase activity","type":"exact"},{"name":"retinol saturase activity","type":"related"}],"termid":"GO:0051786"}


id: PBO:0081007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 44","termid":"PBO:0081007"}


id: PBO:0055149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2568","termid":"PBO:0055149"}


id: GO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of xylose, an aldopentose, where one of the resulting products is ethanol.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylose catabolic process to ethanol","synonyms":[{"name":"xylose catabolism to ethanol","type":"exact"}],"termid":"GO:0044577"}


id: PBO:0012278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family nonsense-mediated mRNA decay (NMD) pathway protein Ebs1 (predicted)","termid":"PBO:0012278"}


id: MOD:00187
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an L-tyrosine residue with L-thyroxine.","definition_xrefs":["ChEBI:18332","PubMed:6704086","Unimod:398","RESID:AA0178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-thyroxine","synonyms":[{"name":"I4Thy","type":"exact"},{"name":"(S)-2-amino-3-[4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodophenyl]propanoic acid","type":"exact"},{"name":"3',3'',5',5''-tetraiodo-L-thyronine","type":"exact"},{"name":"3,3',5,5'-tetraiodo-L-thyronine","type":"exact"},{"name":"3,5,3',5'-tetraiodo-L-thyronine","type":"exact"},{"name":"4-(4-hydroxy-3,5-diiodophenoxy)-3,5-diiodo-L-phenylalanine","type":"exact"},{"name":"L-thyroxine","type":"exact"},{"name":"MOD_RES Thyroxine","type":"exact"},{"name":"O-(4-hydroxy-3,5-diiodophenyl)-3,5-diiodo-L-tyrosine","type":"exact"},{"name":"T4","type":"exact"},{"name":"Thyroxine","type":"related"},{"name":"tetraiodo","type":"related"}],"termid":"MOD:00187"}


id: GO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a peptidyl-serine residue by the formation of O-(phospho-5'-5NA)-L-serine.","definition_xrefs":["RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-protein covalent cross-linking","termid":"GO:0018144"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking via peptidyl-serine","termid":"GO:0018259"}


id: GO:0055016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypochord over time, from its formation to the mature structure. The hypochord is a transient rod-like structure in the embryos of fish, lampreys and amphibians that is located immediately ventral to the notochord. The hypochord may play a role in positioning the dorsal aorta.","definition_xrefs":["GOC:devbiol","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypochord development","synonyms":[{"name":"subnotochordal rod development","type":"exact"}],"termid":"GO:0055016"}


id: PR:O74920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph2 gene.","definition_xrefs":["UniProtKB:O74920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vph2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.10","synonyms":[{"name":"Spom972h-vph2","type":"exact"}],"termid":"PR:O74920"}


id: GO:0004321
data:
  {"annotated_genes":["SJAG_04107","SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93727,96772],"is_not":false,"summary":null,"term":"GO:0004321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADH + 2n NADPH + 4n H+ = a long-chain acyl-CoA + n CoA + n CO2 + 2n NAD+ + 2n NADP+.","definition_xrefs":["EC:2.3.1.86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22896","MetaCyc:FATTY-ACYL-COA-SYNTHASE-RXN"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl- reducing)","type":"related"},{"name":"fatty acyl CoA synthase activity","type":"exact"},{"name":"yeast fatty acid synthase activity","type":"narrow"}],"termid":"GO:0004321","terms_by_termid":{"GO:0004321":null}}


id: PBO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iduronate 2-sulfatase pseudogene 1","termid":"PBO:0050887"}


id: FYPO:0000731
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115352,115353],"is_not":false,"summary":null,"term":"FYPO:0000731"},{"annotations":[115331,115323,115335,115324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex","termid":"FYPO:0001373"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0000731","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: PBO:0065879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB30, member RAS oncogene family","termid":"PBO:0065879"}


id: GO:0044605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + protein-serine = CMP + protein-serine-choline phosphate.","definition_xrefs":["GOC:sp","PMID:21822290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphocholine transferase activity","termid":"GO:0044605"}


id: PBO:0078276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-4","termid":"PBO:0078276"}


id: GO:0005780
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the intraperoxisomal membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"peroxisomal membrane","termid":"GO:0005778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"extrinsic component of intraperoxisomal membrane","synonyms":[{"name":"extrinsic to intraperoxisomal membrane","type":"exact"},{"name":"intra-peroxisomal peripheral membrane","type":"related"}],"termid":"GO:0005780"}


id: PR:P78795
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit G that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10352:SF0","PRO:DNx","OMA:SCHPO02993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.03","secondary_identifiers":["UniProtKB:P78795"],"synonyms":[{"name":"Spom972h-EIF3G","type":"exact"},{"name":"eIF-3 RNA-binding subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3 p33 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3g (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 RNA-binding subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3 p33 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78795"}


id: SO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inserts or removes another region marked by a distinct cognate integration/excision site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integration_excision_site","synonyms":[{"name":"attachment site","type":"related"},{"name":"integration excision site","type":"exact"}],"termid":"SO:0000946"}


id: PBO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 14","termid":"PBO:0071876"}


id: PBO:0085963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the growth defect of mutants lacking protein kinase A activity; involved in cAMP-mediated signaling; localized to the nucleus; similar to the mouse testis-specific protein PBS13","termid":"PBO:0085963"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: GO:0034937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perchlorate + 2 H+ + 2 e- = chlorate + H2O.","definition_xrefs":["UM-BBD_reactionID:r0980"],"gene_count":0,"genotype_count":0,"name":"obsolete perchlorate reductase activity (obsolete GO:0034937)","termid":"GO:0034937"}


id: PBO:0088081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-like protein; Ub-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion during autophagosome formation; membrane anchored Atg8p-PE is involved in phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles","termid":"PBO:0088081"}


id: PBO:0061745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 4","termid":"PBO:0061745"}


id: GO:1990861
data:
  {"annotated_genes":["SJAG_02663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109552],"is_not":false,"summary":null,"term":"GO:1990861"}]},"cv_name":"cellular_component","definition":"A protein complex that cleaves ubiquitin from specific substrates. In the budding yeast Saccharomyces cerevisiae, this complex consists of Ubp3p and Bre5p.","definition_xrefs":["GOC:rb","PMID:12778054","PMID:18391941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ubp3-Bre5 deubiquitination complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ubp3-Bre5 ubiquitin protease complex","type":"exact"}],"termid":"GO:1990861","terms_by_termid":{"GO:1990861":null}}


id: GO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin VI heavy chain binding","termid":"GO:0070854"}


id: PBO:0004854
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.18","termid":"PBO:0004854"}


id: GO:0062183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoate + O2 + reduced [NADPH--hemoprotein reductase] = all-trans-18-hydroxyretinoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:55856","PMID:22020119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"all-trans retinoic acid 18-hydroxylase activity","termid":"GO:0062183"}


id: GO:0098960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane during synaptic transmission.","definition_xrefs":["GOC:dos","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor activity","synonyms":[{"name":"neurotransmitter receptor activity involved in chemical synaptic transmission","type":"exact"}],"termid":"GO:0098960"}


id: GO:0120176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the torso signaling pathway.","definition_xrefs":["GOC:ha","PMID:23732470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of torso signaling pathway","termid":"GO:0120175"},{"relation_name":"positively_regulates","term_name":"torso signaling pathway","termid":"GO:0008293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of torso signaling pathway","termid":"GO:0120176"}


id: PBO:0029857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spheroid_vegetative_cell","termid":"PBO:0029857"}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A synthesis","type":"exact"},{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"}],"termid":"GO:1900778"}


id: PBO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog B","termid":"PBO:0046680"}


id: PBO:0051138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-13","termid":"PBO:0051138"}


id: FYPO:0004511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"long curved interphase microtubules","synonyms":[{"name":"elongated curved interphase microtubules","type":"exact"},{"name":"long curved cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"long curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004511"}


id: GO:0101005
data:
  {"annotated_genes":["SJAG_01481","SJAG_03429","SJAG_00546","SJAG_00573","SJAG_00087","SJAG_02419","SJAG_00662","SJAG_01312","SJAG_03752","SJAG_00742","SJAG_04538","SJAG_01768","SJAG_01281","SJAG_04215","SJAG_00966","SJAG_04651","SJAG_00644","SJAG_00764","SJAG_03686","SJAG_04497","SJAG_02900","SJAG_01528","SJAG_00125","SJAG_00795","SJAG_03147","SJAG_02341","SJAG_02244","SJAG_02774"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96126,97804,106704,107766,111173],"is_not":false,"summary":null,"term":"GO:0101005"},{"annotations":[111245,111172,111955,84566,110314,84439,106332,90548,94056,107765,110817,95890,89450,87451,101634,90188,91342,92583,100615,107141,107705,101799,109632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004843"},{"annotations":[84440,107706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990380"},{"annotations":[92584,87685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061578"},{"annotations":[109633,84567,92585,101635,110818,111246,95891,111957,91344,106334,90189,92442,100616,101800,107768,87686,111174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"}]},"cv_name":"molecular_function","definition":"An isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:30783221","GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00125":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00644":null,"SJAG_00662":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00966":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01481":null,"SJAG_01528":null,"SJAG_01768":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02774":null,"SJAG_02900":null,"SJAG_03147":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04538":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824","GO:0008233"],"is_obsolete":false,"name":"deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9674127","GO:1904265"],"synonyms":[{"name":"ubiquitinyl hydrolase activity","type":"exact"}],"termid":"GO:0101005","terms_by_termid":{"GO:0004843":null,"GO:0061578":null,"GO:0101005":null,"GO:0140492":null,"GO:1990380":null}}


id: GO:0033045
data:
  {"annotated_genes":["SJAG_01297","SJAG_02451","SJAG_00244","SJAG_04999","SJAG_03327","SJAG_00145","SJAG_04884","SJAG_00460","SJAG_04853","SJAG_05329","SJAG_01679","SJAG_00666","SJAG_01956","SJAG_03048","SJAG_04280","SJAG_03126","SJAG_05290","SJAG_03575","SJAG_02336","SJAG_02380","SJAG_01837","SJAG_01805","SJAG_04126","SJAG_04699","SJAG_01330","SJAG_03353","SJAG_04597","SJAG_00883","SJAG_01515","SJAG_01082","SJAG_02332","SJAG_04573","SJAG_02169","SJAG_04140","SJAG_04464","SJAG_03681","SJAG_04968","SJAG_02498","SJAG_00082","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107962,111902,95609,86779,99907,110274,103232,109790,104253],"is_not":false,"rel_names":["is_a","positively_regulates","regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102311,110500],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[102312,112686,97815],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[96159,94722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[98309,96160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[97855,109134,86404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[102313,110503,109794,86781,97816,105908,95457,111554,112689],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[98382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[94723],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[102314,111555],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90249],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates","positively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[98390],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[112012,107963,101173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[109795],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[91204],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[112693],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[107379,93734,96161,110275,98128,89850,110773,98401],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[86062,107206,112696,98402,89851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[86063,90462],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[97355],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[90250],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0090266"},{"annotations":[112698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033047"},{"annotations":[107019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[111054],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid segregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"regulates","term_name":"sister chromatid segregation","termid":"GO:0000819"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00145":null,"SJAG_00244":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04464":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04699":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05290":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of sister chromatid segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033045","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0032888":null,"GO:0033047":null,"GO:0033316":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: GO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"negatively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell differentiation","synonyms":[{"name":"down regulation of NK T cell differentiation","type":"exact"},{"name":"down-regulation of NK T cell differentiation","type":"exact"},{"name":"downregulation of NK T cell differentiation","type":"exact"},{"name":"inhibition of NK T cell differentiation","type":"narrow"},{"name":"negative regulation of NK T cell development","type":"related"},{"name":"negative regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NK T-cell differentiation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NKT cell differentiation","type":"exact"},{"name":"negative regulation of NT cell differentiation","type":"exact"},{"name":"negative regulation of natural T cell differentiation","type":"exact"},{"name":"negative regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051137"}


id: GO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"},{"relation_name":"negatively_regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061106"}


id: PBO:0057616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1182","termid":"PBO:0057616"}


id: GO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The apoptotic process that contributes to luteolysis.","definition_xrefs":["PMID:18566128","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"luteolysis","termid":"GO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in luteolysis","synonyms":[{"name":"apoptosis involved in luteolysis","type":"narrow"},{"name":"structural luteolysis","type":"exact"}],"termid":"GO:0061364"}


id: PBO:0084787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; forms a heterodimer complex with Mto1p that performs the 5-carboxymethylaminomethyl modification of the wobble uridine base in mitochondrial tRNAs; similar to human GTPBP3","termid":"PBO:0084787"}


id: GO:0160109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of a plant from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant gross anatomical part developmental process","synonyms":[{"name":"plant development","type":"related"}],"termid":"GO:0160109"}


id: PBO:0076464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAMALIN antisense RNA 1","termid":"PBO:0076464"}


id: GO:1904855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proteasome regulatory particle.","definition_xrefs":["GOC:TermGenie","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome regulatory particle binding","synonyms":[{"name":"19S regulatory particle binding","type":"narrow"},{"name":"PA700 proteasome activator binding","type":"narrow"},{"name":"PA700-dependent proteasome activator binding","type":"exact"},{"name":"modulator complex binding","type":"related"}],"termid":"GO:1904855"}


id: PBO:0077934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 7","termid":"PBO:0077934"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: PR:P87133
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug143 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 143 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.06c","synonyms":[{"name":"Spom972h-mug143","type":"exact"}],"termid":"PR:P87133"}


id: FYPO:0005363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle kinetochore microtubule depolymerization, occurs to a lesser extent than normal during mitotic chromosome recapture.","definition_xrefs":["PMID:18256284","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic spindle microtubule depolymerization","termid":"FYPO:0004650"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0000138","FYPO:0000337","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased kinetochore microtubule catastrophe during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased kinetochore microtubule depolymerisation during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization chromosome recapture during mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"decreased kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"decreased kinetochore microtubule shrinkage during mitotic metaphase chromosome recapture","type":"related"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during kinetochore retrieval","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to SPB","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"},{"name":"decreased mitotic spindle kinetochore microtubule depolymerization during sister kinetochore recapture","type":"exact"},{"name":"reduced kinetochore microtubule depolymerization during mitotic metaphase chromosome recapture","type":"exact"}],"termid":"FYPO:0005363"}


id: PBO:0091629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenazine biosynthesis PhzF protein family","termid":"PBO:0091629"}


id: GO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc.","definition_xrefs":["PMID:11323440","PMID:11356829","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactose 3-O-sulfotransferase activity","synonyms":[{"name":"Gal-3-O-sulfotransferase activity","type":"exact"},{"name":"galactose 3-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0050694"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["PMID:9927449","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: FYPO:0000822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of pheromone in growth medium","termid":"FYPO:0000820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"decreased concentration of P-factor in growth medium","synonyms":[{"name":"decreased accumulation of P-factor in growth medium","type":"related"},{"name":"decreased level of P-factor in growth medium","type":"exact"},{"name":"decreased release of P-factor into growth medium","type":"related"},{"name":"reduced concentration of P-factor in growth medium","type":"exact"}],"termid":"FYPO:0000822"}


id: PBO:0081316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 100","termid":"PBO:0081316"}


id: GO:1904710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulosa cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:19208546","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"is_a","term_name":"regulation of granulosa cell apoptotic process","termid":"GO:1904708"},{"relation_name":"positively_regulates","term_name":"granulosa cell apoptotic process","termid":"GO:1904700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulosa cell apoptotic process","synonyms":[{"name":"activation of granulosa cell apoptosis","type":"narrow"},{"name":"activation of granulosa cell apoptotic process","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"activation of granulosa cell of ovary apoptotic process","type":"narrow"},{"name":"positive regulation of granulosa cell apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"positive regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell apoptotic process","type":"exact"},{"name":"up-regulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"up-regulation of granulosa cell of ovary apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell apoptotic process","type":"exact"},{"name":"upregulation of granulosa cell of ovary apoptosis","type":"narrow"},{"name":"upregulation of granulosa cell of ovary apoptotic process","type":"exact"}],"termid":"GO:1904710"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: GO:0015315
data:
  {"annotated_genes":["SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: organophosphate(out) + phosphate(in) = organophosphate(in) +  phosphate(out).","definition_xrefs":["TC:2.A.1.4.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00612":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"organophosphate:phosphate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organophosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015315","terms_by_termid":{"GO:0140987":null}}


id: PBO:0053023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LanC like family member 3","termid":"PBO:0053023"}


id: GO:0015230
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103565],"is_not":false,"summary":null,"term":"GO:0015230"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of flavin-adenine dinucleotide (FAD) from one side of a membrane to the other. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"FAD transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005472"],"synonyms":[{"name":"FAD carrier activity","type":"related"},{"name":"FAD transporter activity","type":"broad"},{"name":"flavin adenine dinucleotide carrier activity","type":"related"},{"name":"flavin adenine dinucleotide transmembrane transporter activity","type":"exact"},{"name":"flavin-adenine dinucleotide carrier activity","type":"related"},{"name":"flavin-adenine dinucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015230","terms_by_termid":{"GO:0015230":null}}


id: PBO:0016075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp3 (predicted)","termid":"PBO:0016075"}


id: GO:0018449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-1-phenylethanol + NAD+ = acetophenone + H+ + NADH.","definition_xrefs":["RHEA:28198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-phenylethanol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0032","EC:1.1.1.311"],"termid":"GO:0018449"}


id: GO:0000992
data:
  {"annotated_genes":["SJAG_03120","SJAG_05339","SJAG_03354","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84262,95602],"is_not":false,"summary":null,"term":"GO:0000992"},{"annotations":[95604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[95605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[91630,99086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase III. The transcribed region might be contain a single gene or a cistron containing multiple genes.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA binding","termid":"GO:0000987"},{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulatory region sequence-specific DNA binding","termid":"GO:0001016"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000992","terms_by_termid":{"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null}}


id: _global:present_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is observed, where it is not known whether the modification was added during the indicated phase or process (if this is known use the added_during relation) or during a preceding phase or process.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"present_during","termid":"_global:present_during"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein. May also hydrolyze diacylglycerol and phospholipids present in lipoproteins.","definition_xrefs":["EC:3.1.1.34","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triacylglycerol lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-8980228","Reactome:R-HSA-2395768","Reactome:R-HSA-1482811","Reactome:R-HSA-174757","Reactome:R-HSA-8979996","Reactome:R-HSA-6789310"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: PBO:0064925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit","termid":"PBO:0064925"}


id: PR:G2TRK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC110.05 gene.","definition_xrefs":["UniProtKB:G2TRK5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C110.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC110.05","synonyms":[{"name":"Spom972h-SPAC110.05","type":"exact"}],"termid":"PR:G2TRK5"}


id: PBO:0074775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3H","termid":"PBO:0074775"}


id: PBO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 46","termid":"PBO:0061386"}


id: GO:0042626
data:
  {"annotated_genes":["SJAG_03785","SJAG_01669","SJAG_00212","SJAG_05213","SJAG_02023","SJAG_04167","SJAG_00516","SJAG_02602","SJAG_02399","SJAG_04955","SJAG_02782","SJAG_02457","SJAG_01344","SJAG_03415","SJAG_01400","SJAG_01471","SJAG_01447","SJAG_03406","SJAG_03866","SJAG_00373","SJAG_04258","SJAG_04757","SJAG_02077","SJAG_01879","SJAG_01913","SJAG_03363","SJAG_03497","SJAG_04277","SJAG_03358","SJAG_03560","SJAG_00136","SJAG_01817","SJAG_03515","SJAG_03502","SJAG_05294","SJAG_01597","SJAG_03850","SJAG_01435","SJAG_01129","SJAG_01397","SJAG_04015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114198],"is_not":false,"summary":null,"term":"GO:0042626"},{"annotations":[85339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[93096,114195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[96903,97611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[113947,92116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[111092,91502,97043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[104670,97653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[103857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[97045,111093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[103858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[108353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[108354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[109784,83782,83783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[108355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[91503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[107806,99298,103595,95565,86952,101183,92927,103573,96345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[91702,94941,92660,98686,85915,96038,86224,97659,99926,84115,95962,105873,114720,88098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Primary active transporter of a solute across a membrane, via the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of a substance across a membrane. The transport protein may be transiently phosphorylated (P-type transporters), or not (ABC-type transporters and other families of transporters). Primary active transport occurs up the solute's concentration gradient and is driven by a primary energy source.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary active transmembrane transporter activity","termid":"GO:0015399"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01344":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02602":null,"SJAG_02782":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9750617","Reactome:R-HSA-1467457","Reactome:R-HSA-9659680","Reactome:R-HSA-2161538","Reactome:R-HSA-9753284","EC:7.2.2.-","Reactome:R-HSA-9759454","Reactome:R-HSA-9753283","GO:0015405","GO:0043492","Reactome:R-HSA-9033505","Reactome:R-HSA-9750546","Reactome:R-HSA-9753278","GO:0016820","Reactome:R-HSA-9033499","Reactome:R-HSA-9794120","Reactome:R-HSA-2161506","Reactome:R-HSA-9759461","Reactome:R-HSA-9794572"],"synonyms":[{"name":"ATP-coupled transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to movement of substances","type":"broad"},{"name":"ATPase activity, coupled to transmembrane movement of substances","type":"exact"},{"name":"P-P-bond-hydrolysis-driven transmembrane transporter activity","type":"broad"},{"name":"P-P-bond-hydrolysis-driven transporter","type":"broad"},{"name":"hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances","type":"narrow"}],"termid":"GO:0042626","terms_by_termid":{"GO:0005388":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0042626":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: GO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + quaternary ammonium(out) = ADP + H+ + phosphate + quaternary ammonium(in).","definition_xrefs":["RHEA:11036","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type quaternary ammonium compound transporting activity","secondary_identifiers":["MetaCyc:RXN-8638","EC:7.6.2.9","GO:0102908"],"synonyms":[{"name":"ATP-dependent quaternary-ammonium compound transmembrane transporting activity","type":"related"},{"name":"ATPase-coupled quaternary ammonium compound transmembrane transporting activity","type":"related"},{"name":"glycine betaine/proline porter activity","type":"narrow"},{"name":"quarternary amine transporter activity","type":"broad"},{"name":"quaternary amine uptake transporter activity","type":"related"},{"name":"quaternary-amine-transporting ATPase activity","type":"related"},{"name":"quaternary-ammonium-compound ABC transporter","type":"exact"},{"name":"quaternary-ammonium-compound-transporting ATPase activity","type":"related"}],"termid":"GO:0015418"}


id: PBO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain containing 1","termid":"PBO:0045928"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: FYPO:0006494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly lower than the range in wild type cells.","definition_xrefs":["PMID:19205745","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rDNA copy number during vegetative growth","synonyms":[{"name":"decreased copy number of rDNA repeats","type":"exact"},{"name":"decreased copy number of rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased rDNA copy number during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal DNA copy number during vegetative growth","type":"exact"},{"name":"shortened rDNA during vegetative growth","type":"related"}],"termid":"FYPO:0006494"}


id: MOD:01075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a mercury atom or a cluster containing mercury for hydrogen atoms, or that coordinates a mercury ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury containing modified residue","synonyms":[{"name":"HgRes","type":"exact"}],"termid":"MOD:01075"}


id: PBO:0041335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 14","termid":"PBO:0041335"}


id: GO:1903691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:18394891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"positively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"activation of wound healing, spreading of epidermal cells","type":"narrow"},{"name":"up regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"up-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"upregulation of wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:1903691"}


id: PR:O74994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng3 gene.","definition_xrefs":["UniProtKB:O74994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.04c","synonyms":[{"name":"Spom972h-rng3","type":"exact"}],"termid":"PR:O74994"}


id: PBO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1","termid":"PBO:0061746"}


id: PBO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_eggs_laid_in_by","termid":"PBO:0034390"}


id: FYPO:0005294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hydroxyurea. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein binding during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein-protein interaction during cellular response to HU","type":"exact"},{"name":"decreased protein-protein interaction in response to hydroxyurea","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005294"}


id: GO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036494"}


id: PBO:0038782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor like type 1","termid":"PBO:0038782"}


id: PBO:0001241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Oma1 (predicted)","termid":"PBO:0001241"}


id: GO:0031148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one, also known as DIF-1, differentiation-inducing factor-1. DIF-1 is a secreted chlorinated molecule that controls cell fate during development of Dictyostelium cells.","definition_xrefs":["GOC:mah","PMID:10706822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one metabolic process","termid":"GO:0031147"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"DIF-1 biosynthetic process","synonyms":[{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one anabolism","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one biosynthesis","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one biosynthetic process","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one formation","type":"exact"},{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one synthesis","type":"exact"},{"name":"DIF-1 biosynthesis","type":"exact"}],"termid":"GO:0031148"}


id: PBO:0066225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 28","termid":"PBO:0066225"}


id: PBO:0083061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoamide dehydrogenase; the lipoamide dehydrogenase component (E3) of the pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase multi-enzyme complexes; PDH complex is concentrated in spots within the mitochondrial matrix, often near the ERMES complex and near peroxisomes; LPD1 has a paralog, IRC15, that arose from the whole genome duplication","termid":"PBO:0083061"}


id: GO:0005727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"extrachromosomal DNA","termid":"GO:0046821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal circular DNA","termid":"GO:0005727"}


id: PR:Q9P7Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Y8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin ring organizing protein mid2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.03c","synonyms":[{"name":"Spom972h-mid2","type":"exact"}],"termid":"PR:Q9P7Y8"}


id: PR:O43066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk30 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.02","synonyms":[{"name":"Spom972h-ppk30","type":"exact"}],"termid":"PR:O43066"}


id: PBO:0039666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 1","termid":"PBO:0039666"}


id: PBO:0083249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by fungal homology and RT-PCR","termid":"PBO:0083249"}


id: GO:0015308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + amiloride(in) = H+(in) + amiloride(out).","definition_xrefs":["TC:2.A.1.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride:proton antiporter activity (obsolete GO:0015308)","synonyms":[{"name":"amiloride:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015308"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086","GO:0098754"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: PBO:0060625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP1 pseudogene 1","termid":"PBO:0060625"}


id: PR:Q9P6Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An enolase-phosphatase E1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01125","PRO:DNx","PANTHER:PTHR20371:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase-phosphatase E1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.08","secondary_identifiers":["UniProtKB:Q9P6Q2"],"synonyms":[{"name":"2,3-diketo-5-methylthio-1-phosphopentane phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ENOPH1","type":"exact"}],"termid":"PR:Q9P6Q2"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: PBO:0036044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_along_microtubule_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036044"}


id: PR:Q09834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.08","secondary_identifiers":["UniProtKB:Q09834"],"synonyms":[{"name":"Spom972h-SLC25A44","type":"exact"}],"termid":"PR:Q09834"}


id: PBO:0036091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_translation_gene_mRNA_during_vegetative_growth","termid":"PBO:0036091"}


id: SO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mating type region motif, the rightmost segment of homology in the HML and MAT mating loci (not present in HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Z2_region","synonyms":[{"name":"Z2-segment","type":"exact"}],"termid":"SO:0002003"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_03170","SJAG_01116","SJAG_04221","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86467,100385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[103024,111209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: RO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_vector_for","termid":"RO:0002459"}


id: PBO:0060411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 38, NatC auxiliary subunit","termid":"PBO:0060411"}


id: SO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Isowyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isowyosine","secondary_identifiers":["RNAMOD:101"],"synonyms":[{"name":"imG2","type":"exact"}],"termid":"SO:0001342"}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: _global:has_target_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This relationship holds between p and l when p is a transport or localization process in which the outcome is to move some cargo c from a an initial location to some destination l.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_transport_to_from_or_in","termid":"_global:results_in_transport_to_from_or_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_target_end_location","secondary_identifiers":["RO:0002339"],"termid":"_global:has_target_end_location"}


id: PBO:0061239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein","termid":"PBO:0061239"}


id: GO:2001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cellooligosaccharide binding","termid":"GO:2001064"}


id: PBO:0024804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_activity_in","termid":"PBO:0024804"}


id: PBO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug95","termid":"PBO:0016975"}


id: GO:0140999
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112557],"is_not":false,"summary":null,"term":"GO:0140999"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + 3 S-adenosyl-L-methionine = 2 H+ + N6,N6-trimethyl-L-lysyl4-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me3.","definition_xrefs":["PMID:18375658","RHEA:60260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008276","GO:0140096","GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 trimethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.354"],"synonyms":[{"name":"histone H3-K4 trimethylation","type":"broad"},{"name":"histone H3K4 trimethylase activity","type":"exact"},{"name":"histone H3K4 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140999","terms_by_termid":{"GO:0140999":null}}


id: PR:O13756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.06c","secondary_identifiers":["UniProtKB:O13756"],"synonyms":[{"name":"Spom972h-VPS8","type":"exact"},{"name":"vacuolar protein-targeting protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13756"}


id: GO:0034007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (S)-linalool + diphosphate.","definition_xrefs":["EC:4.2.3.25","RHEA:24116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"S-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07631","MetaCyc:4.2.3.25-RXN"],"synonyms":[{"name":"3S-linalool synthase activity","type":"related"},{"name":"LIS","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming] activity","type":"related"}],"termid":"GO:0034007"}


id: SO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an aspartic acid anticodon, and a 3' aspartic acid binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"aspartic_acid_tRNA_primary_transcript","termid":"SO:0000214"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl_tRNA","synonyms":[{"name":"aspartyl tRNA","type":"exact"},{"name":"aspartyl-transfer RNA","type":"exact"},{"name":"aspartyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000257"}


id: PBO:0029728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_1,3-beta-D-glucan_synthase_activity_during_growth_on_aculeacin_A","termid":"PBO:0029728"}


id: PR:Q9P4W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01423","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.09c","secondary_identifiers":["UniProtKB:Q9P4W7"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC5","type":"exact"}],"termid":"PR:Q9P4W7"}


id: GO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-positive bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive antibacterial peptide activity (obsolete GO:0008224)","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"exact"}],"termid":"GO:0008224"}


id: MOD:00678
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an hydroxylated L-proline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated proline","synonyms":[{"name":"HyPro","type":"exact"}],"termid":"MOD:00678"}


id: GO:0035611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a branching point glutamate residue. A branching point glutamate connects a glutamate side chain to a gene-encoded glutamate residue.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein branching point deglutamylation","termid":"GO:0035611"}


id: GO:0008903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypyruvate = 2-hydroxy-3-oxopropanoate.","definition_xrefs":["EC:5.3.1.22","RHEA:11952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"hydroxypyruvate isomerase activity","secondary_identifiers":["KEGG_REACTION:R01394","MetaCyc:RXN0-305"],"synonyms":[{"name":"hydroxypyruvate aldose-ketose-isomerase activity","type":"related"},{"name":"hydroxypyruvate ketol-isomerase activity","type":"related"}],"termid":"GO:0008903"}


id: PBO:0043704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 1","termid":"PBO:0043704"}


id: PBO:0113554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase, poorly characterised, conflicting annotations between species, implicated in ribosome or centrosome associated processes and gene expression","termid":"PBO:0113554"}


id: GO:0004275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys6-Ile7 bond in trypsinogen.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete enteropeptidase activity (obsolete GO:0004275)","synonyms":[{"name":"enterokinase activity","type":"related"},{"name":"enteropeptidase activity","type":"exact"}],"termid":"GO:0004275"}


id: PBO:0069969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1264, pseudogene","termid":"PBO:0069969"}


id: GO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of calcidiol 1-monooxygenase activity","termid":"GO:0060558"}


id: PBO:0062279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 15","termid":"PBO:0062279"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: GO:1900201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spread of virus in host, cell to cell.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of spread of virus in host, cell to cell (obsolete GO:1900201)","synonyms":[{"name":"regulation of cell to cell spread of virus within host","type":"exact"},{"name":"regulation of spread of virus in host, cell to cell","type":"exact"},{"name":"regulation of spread of virus within host, cell to cell","type":"exact"},{"name":"regulation of viral spread within host, cell to cell","type":"exact"}],"termid":"GO:1900201"}


id: PBO:0091953
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-Coil protein Quantitatively enriched","termid":"PBO:0091953"}


id: GO:0102392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: decanoate + ATP(4-) + an HmqF protein = AMP(2-) + diphosphoric acid + a decanoyl-HmqF protein.","definition_xrefs":["EC:6.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"decanoate-[HmqF protein] ligase activity","secondary_identifiers":["MetaCyc:RXN-13623"],"termid":"GO:0102392"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PBO:0068376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 169","termid":"PBO:0068376"}


id: FYPO:0000760
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115457,115460],"is_not":false,"summary":null,"term":"FYPO:0000760"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"mating phenotype","termid":"FYPO:0000301"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000301"],"is_obsolete":false,"name":"normal mating","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta"],"synonyms":[{"name":"normal conjugation","type":"exact"},{"name":"normal conjugation with cellular fusion","type":"exact"},{"name":"normal zygote formation","type":"related"}],"termid":"FYPO:0000760","terms_by_termid":{"FYECO:0000015":null,"FYPO:0000760":null}}


