# terms

id: GO:1902782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decane stimulus.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000071","GOC:TermGenie","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decane","termid":"GO:1902782"}


id: CHEBI:29103
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium(1+)","termid":"CHEBI:29103"}


id: PBO:0108612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F2, pseudogene","termid":"PBO:0108612"}


id: PBO:0017971
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc18 protein half-life 5 minutes","termid":"PBO:0017971"}


id: PR:O13969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24C9.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.09","synonyms":[{"name":"Spom972h-SPAC24C9.09","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13969"}


id: PBO:0040390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit C2","termid":"PBO:0040390"}


id: PR:O36021
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CCAAT/enhancer-binding protein zeta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12048:SF0","OMA:SCHPO02012","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.09c","secondary_identifiers":["UniProtKB:O36021"],"synonyms":[{"name":"Spom972h-CEBPZ","type":"exact"}],"termid":"PR:O36021"}


id: MOD:01681
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-aspartic acid residue with one methyl group.","definition_xrefs":["OMSSA:16","Unimod:34#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated aspartic acid","termid":"MOD:00887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-aspartic acid","synonyms":[{"name":"Me1Asp","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"methyld","type":"exact"}],"termid":"MOD:01681"}


id: PBO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2 (predicted)","termid":"PBO:0031889"}


id: GO:1900135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"positively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renin secretion into blood stream","synonyms":[{"name":"activation of renin release into blood stream","type":"narrow"},{"name":"activation of renin secretion into blood stream","type":"narrow"},{"name":"positive regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin release into blood stream","type":"exact"},{"name":"up regulation of renin secretion into blood stream","type":"exact"},{"name":"up-regulation of renin release into blood stream","type":"exact"},{"name":"up-regulation of renin secretion into blood stream","type":"exact"},{"name":"upregulation of renin release into blood stream","type":"exact"},{"name":"upregulation of renin secretion into blood stream","type":"exact"}],"termid":"GO:1900135"}


id: GO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 2A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"protein phosphatase 2A binding","synonyms":[{"name":"protein phosphatase 2 binding","type":"related"}],"termid":"GO:0051721"}


id: PBO:0050528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin","termid":"PBO:0050528"}


id: PBO:0069473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 740, pseudogene","termid":"PBO:0069473"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: PBO:0041907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: PBO:0084000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol-3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase; located in lipid particles and the ER; involved in the stepwise acylation of glycerol-3-phosphate and dihydroxyacetone in lipid biosynthesis; the most conserved motifs and functionally relevant residues are oriented towards the ER lumen","termid":"PBO:0084000"}


id: FYPO:0004239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004239"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: GO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + CoA = ADP + phosphate + acetyl-CoA.","definition_xrefs":["RHEA:15081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"acetate-CoA ligase (ADP-forming) activity","secondary_identifiers":["EC:6.2.1.13","GO:0043762","MetaCyc:ACETATE--COA-LIGASE-ADP-FORMING-RXN"],"synonyms":[{"name":"acetate thiokinase activity","type":"broad"},{"name":"acetate--CoA ligase (ADP-forming) activity","type":"exact"},{"name":"acetate:CoA ligase (ADP-forming)","type":"related"},{"name":"acetyl coenzyme A synthetase (adenosine diphosphate-forming)","type":"exact"},{"name":"acetyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"aryl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043758"}


id: GO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"regulation of EGF receptor activity","type":"exact"},{"name":"regulation of EGFR activity","type":"exact"},{"name":"regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007176"}


id: PBO:0031884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved mitochondrial protein (predicted)","termid":"PBO:0031884"}


id: PBO:0074762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary ossification center associated regulator of chondrocyte maturation","termid":"PBO:0074762"}


id: PBO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sensitivity_to_chemical_during_vegetative_growth","termid":"PBO:0031303"}


id: PBO:0082824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved oxidoreductase involved in lipid droplet morphology; mutant shows defects in CPY processing and vacuolar morphology; required for replication of Brome mosaic virus in S. cerevisiae, a model system for studying replication of positive-strand RNA viruses in their natural hosts; homologus to human RDH12 linked to Leber Congenital Amaurosis","termid":"PBO:0082824"}


id: GO:0030404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete collagenase 3 activity (obsolete GO:0030404)","synonyms":[{"name":"MMP-13","type":"exact"},{"name":"collagenase 3 activity","type":"exact"},{"name":"matrix metalloproteinase 13","type":"exact"}],"termid":"GO:0030404"}


id: PBO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 23","termid":"PBO:0070844"}


id: GO:1900334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0044281","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from 3-(methylthio)propionic acid","synonyms":[{"name":"down regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"down-regulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"downregulation of methane biosynthetic process from 3-(methylthio)propionic acid","type":"exact"},{"name":"inhibition of methane biosynthetic process from 3-(methylthio)propionic acid","type":"narrow"}],"termid":"GO:1900334"}


id: GO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryo sac are generated and organized. The embryo sac develops from the megaspore in heterosporous plants.","definition_xrefs":["GOC:mtg_plant","PMID:25332875","GOC:jid","PMID:12271029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac morphogenesis","synonyms":[{"name":"female gametophyte morphogenesis","type":"exact"}],"termid":"GO:0048314"}


id: GO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new neuromast sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"neuromast regeneration","termid":"GO:0070657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation involved in neuromast regeneration","termid":"GO:0070658"}


id: GO:0043649
data:
  {"annotated_genes":["SJAG_00714","SJAG_03434","SJAG_00937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[87749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[78515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dicarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate catabolic process","type":"exact"},{"name":"dicarboxylate catabolism","type":"exact"},{"name":"dicarboxylic acid breakdown","type":"exact"},{"name":"dicarboxylic acid catabolism","type":"exact"},{"name":"dicarboxylic acid degradation","type":"exact"}],"termid":"GO:0043649","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0019266":null}}


id: PBO:0056183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein (pseudogene)","termid":"PBO:0056183"}


id: PBO:0065161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion like protein doppel","termid":"PBO:0065161"}


id: SO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome where regulatory events occur, including epigenetic modifications. These epigenetic modifications can include nucleosome modifications and post-replicational DNA modifications.","definition_xrefs":["PMID:32782014","GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin_regulatory_region","synonyms":[{"name":"chromatin regulatory region","type":"exact"}],"termid":"SO:0002306"}


id: GO:2001193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation involved in immune response","termid":"GO:2001191"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"positive regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"positive regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"positive regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"positive regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001193"}


id: GO:1902313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["PMID:21489137","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of copper ion transmembrane transport","termid":"GO:1902311"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of copper ion transmembrane transport","synonyms":[{"name":"activation of copper cation transmembrane transport","type":"narrow"},{"name":"activation of copper ion membrane transport","type":"narrow"},{"name":"activation of copper ion transmembrane transport","type":"narrow"},{"name":"positive regulation of copper cation transmembrane transport","type":"exact"},{"name":"positive regulation of copper ion membrane transport","type":"exact"},{"name":"up regulation of copper cation transmembrane transport","type":"exact"},{"name":"up regulation of copper ion membrane transport","type":"exact"},{"name":"up regulation of copper ion transmembrane transport","type":"exact"},{"name":"up-regulation of copper cation transmembrane transport","type":"exact"},{"name":"up-regulation of copper ion membrane transport","type":"exact"},{"name":"up-regulation of copper ion transmembrane transport","type":"exact"},{"name":"upregulation of copper cation transmembrane transport","type":"exact"},{"name":"upregulation of copper ion membrane transport","type":"exact"},{"name":"upregulation of copper ion transmembrane transport","type":"exact"}],"termid":"GO:1902313"}


id: PATO:0000587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased size","synonyms":[{"name":"hypoplasia","type":"narrow"},{"name":"reduced","type":"related"},{"name":"small","type":"related"},{"name":"tiny","type":"related"},{"name":"underdeveloped","type":"narrow"}],"termid":"PATO:0000587"}


id: GO:1990029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmical contraction and relaxation of arterioles, observed as slow and fast waves, with frequencies of 1-2 and 10-20 cpm.","definition_xrefs":["PMID:1932763","GOC:sl","PMID:14993429","PMID:15678091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasomotion","termid":"GO:1990029"}


id: FYPO:0003226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle","synonyms":[{"name":"delayed onset of protein localisation to mitotic spindle","type":"exact"},{"name":"delayed onset of protein localization to spindle during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein mitotic spindle to mitotic spindle during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0003226"}


id: GO:0052116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in host environment (obsolete GO:0052116)","synonyms":[{"name":"chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052116"}


id: GO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0016740","GO:0005215","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-glucose phosphotransferase system transporter activity","termid":"GO:0090564"}


id: GO:0043170
data:
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id: PBO:0018257
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id: GO:0039010
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric distal tubule morphogenesis","termid":"GO:0039013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric distal tubule identity","termid":"GO:0039010"}


id: GO:0009360
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The DNA polymerase III holoenzyme is a complex that contains 10 different types of subunits. These subunits are organized into 3 functionally essential sub-assemblies: the pol III core, the beta sliding clamp processivity factor and the clamp-loading complex. The pol III core carries out the polymerase and the 3'-5' exonuclease proofreading activities. The polymerase is tethered to the template via the sliding clamp processivity factor. The clamp-loading complex assembles the beta processivity factor onto the primer template and plays a central role in the organization and communication at the replication fork.","definition_xrefs":["PMID:12940977","PMID:11525729","UniProt:P06710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase III complex","synonyms":[{"name":"DNA polymerase III holoenzyme complex","type":"exact"}],"termid":"GO:0009360"}


id: PBO:0004403
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe LRO 1 Homolog","termid":"PBO:0004403"}


id: PBO:0059849
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id: FYPO:0006002
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id: FYPO:0007724
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ERMES foci in a cell are normal (i.e. indistinguishable from wild type) in number, size, and distribution. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PMID:33483504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ERMES foci","synonyms":[{"name":"normal ERMES foci during mitotic cell cycle","type":"related"},{"name":"normal ERMES foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007724"}


id: GO:0009810
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id: PBO:0040293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2A1 antisense RNA 1","termid":"PBO:0040293"}


id: PBO:0075730
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 9 pseudogene 1","termid":"PBO:0075730"}


id: PR:Q10167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26A3.14c gene.","definition_xrefs":["UniProtKB:Q10167","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26A3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.14c","synonyms":[{"name":"Spom972h-SPAC26A3.14c","type":"exact"}],"termid":"PR:Q10167"}


id: PBO:0089231
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI family protein, domain found in context with a broad range of enzymes","termid":"PBO:0089231"}


id: SO:0001201
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A positive_sense_RNA_viral_sequence is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus that can be immediately translated by the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positive_sense_ssRNA_viral_sequence","synonyms":[{"name":"positive sense single stranded RNA virus","type":"related"},{"name":"positive sense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001201"}


id: PBO:0089222
data:
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id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: GO:0043622
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id: PBO:0085662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of transcription; required for RNA polyadenylation; exhibits regulated interactions with both histones and SWI-SNF components; relocalizes to the cytosol in response to hypoxia; similar to mammalian HMG1 proteins","termid":"PBO:0085662"}


id: PBO:0084462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway; functionally redundant with Ssk2p; interacts with and is activated by Ssk1p; phosphorylates Pbs2p; SSK22 has a paralog, SSK2, that arose from the whole genome duplication","termid":"PBO:0084462"}


id: PBO:0079971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 9","termid":"PBO:0079971"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: GO:0008514
data:
  {"annotated_genes":["SJAG_01960","SJAG_01924","SJAG_04325","SJAG_04984","SJAG_00612","SJAG_04706","SJAG_03644","SJAG_04593","SJAG_00434","SJAG_03899","SJAG_05325","SJAG_03400","SJAG_00232","SJAG_01344","SJAG_00276","SJAG_03256","SJAG_04295","SJAG_04162","SJAG_04588","SJAG_03334","SJAG_00671","SJAG_01505","SJAG_00543","SJAG_04637","SJAG_02779","SJAG_01406","SJAG_02050","SJAG_03577","SJAG_04718","SJAG_02780","SJAG_01660","SJAG_04725","SJAG_05175","SJAG_00835","SJAG_03497","SJAG_00275","SJAG_00522","SJAG_03503","SJAG_03452","SJAG_00626","SJAG_02029","SJAG_01872","SJAG_02140","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[93096,114195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[94729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015123"},{"annotations":[102696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[92603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[106899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[70833,88106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[83539,70147,78600,78797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046943"},{"annotations":[87827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[114998,109701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[70831,88107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[103565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[103566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[88534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015128"},{"annotations":[109145,91572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[98614,98612,98613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001406"},{"annotations":[94261,96266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[96267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170045"},{"annotations":[84489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[92071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[96386,93401,99855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[106024,98818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[94262,92605,99856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93402,99857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[98819,106025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[99858,106026,96387,93403,98820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[103907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[96378,97236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99859,86674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"},{"annotations":[97679,114448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[97681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[84490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[104289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[108264,89382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089721"},{"annotations":[110165,90445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050833"},{"annotations":[97682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015141"},{"annotations":[97683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[99653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090422"},{"annotations":[108270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[108379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[100976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[100977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of organic anions from one side of a membrane to the other. 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id: PBO:0063089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 7","termid":"PBO:0063089"}


id: PBO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp2 (predicted)","termid":"PBO:0018080"}


id: GO:0033954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 1,3-alpha-L-galactosidic linkages of neoagaro-oligosaccharides that are smaller than a hexamer, yielding 3,6-anhydro-L-galactose and D-galactose.","definition_xrefs":["EC:3.2.1.159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"alpha-neoagaro-oligosaccharide hydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.159-RXN"],"synonyms":[{"name":"alpha-NAOS hydrolase activity","type":"related"},{"name":"alpha-neoagaro-oligosaccharide 3-glycohydrolase activity","type":"related"},{"name":"alpha-neoagarooligosaccharide hydrolase activity","type":"related"}],"termid":"GO:0033954"}


id: PBO:0057773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2276","termid":"PBO:0057773"}


id: GO:0090372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jh","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of glycerol transport","termid":"GO:0090371"},{"relation_name":"positively_regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glycerol transport","termid":"GO:0090372"}


id: GO:0051035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"DNA transmembrane transporter activity","termid":"GO:0051035"}


id: FYPO:0000339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum in an abnormal location. The normal location is at the midpoint of the long axis of the cell. The site of septum assembly is normally determined by the location of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized septum during vegetative growth","secondary_identifiers":["FYPO:0002154"],"synonyms":[{"name":"abnormal contractile ring localization resulting in abnormal septum site selection","type":"related"},{"name":"abnormal contractile ring localization resulting in mislocalized septum","type":"related"},{"name":"abnormal division septum site selection","type":"related"},{"name":"abnormal septum localization during vegetative growth","type":"related"},{"name":"abnormal septum location during vegetative growth","type":"exact"},{"name":"abnormal septum position during vegetative growth","type":"exact"},{"name":"abnormal septum positioning during vegetative growth","type":"related"},{"name":"abnormal septum postitioning","type":"exact"},{"name":"abnormal septum site selection","type":"related"},{"name":"abnormal septum site selection during mitotic cell cycle","type":"related"},{"name":"abnormal septum site selection during vegetative growth","type":"related"},{"name":"asymmetric septum during vegetative growth","type":"exact"},{"name":"asymmetrically located septum during vegetative growth","type":"exact"},{"name":"mislocalised septum during vegetative growth","type":"exact"},{"name":"mislocalized septum during mitotic cell cycle","type":"related"},{"name":"misplaced septum during vegetative growth","type":"exact"},{"name":"septum site selection defects","type":"related"}],"termid":"FYPO:0000339"}


id: PBO:0027229
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_fatty_acid","termid":"PBO:0027229"}


id: PBO:0053705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 907","termid":"PBO:0053705"}


id: PBO:0055135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2554","termid":"PBO:0055135"}


id: PR:Q9URV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC106.07c gene.","definition_xrefs":["UniProtKB:Q9URV4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C106.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.07c","synonyms":[{"name":"Spom972h-SPBC106.07c","type":"exact"}],"termid":"PR:Q9URV4"}


id: GO:0120194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["PMID:30911018","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anther dehiscence","termid":"GO:0120194"}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: PBO:0054633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2038","termid":"PBO:0054633"}


id: PBO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XV alpha 1 chain","termid":"PBO:0043583"}


id: PBO:0075936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 1","termid":"PBO:0075936"}


id: GO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"keratin filament","synonyms":[{"name":"acidic keratin","type":"related"},{"name":"basic/neutral keratin","type":"related"}],"termid":"GO:0045095"}


id: GO:0032145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to succinate-semialdehyde dehydrogenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase binding","synonyms":[{"name":"succinic semialdehyde dehydrogenase binding","type":"exact"}],"termid":"GO:0032145"}


id: PBO:0090153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2","termid":"PBO:0090153"}


id: FYPO:0003686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of a box C/D snoRNA molecule is abnormal.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal box C/D snoRNA 3'-end processing","synonyms":[{"name":"abnormal box C/D snoRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal box C/D snoRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003686"}


id: PBO:0003210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex Spc98/GCP3 subunit Alp6","termid":"PBO:0003210"}


id: PBO:0085778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1801 has a paralog, YAP1802, that arose from the whole genome duplication","termid":"PBO:0085778"}


id: GO:0102454
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin + UDP-D-galactose = cyanidin 3-O-beta-D-galactoside betaine + UDP.","definition_xrefs":["RHEA:35631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"cyanidin 3-O-galactosyltransferase activity","secondary_identifiers":["EC:2.4.1.294","MetaCyc:RXN-13960"],"termid":"GO:0102454"}


id: PBO:0085846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; phosphorylated in response to alpha factor; protein abundance increases in response to DNA replication stress","termid":"PBO:0085846"}


id: PBO:0075660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPTBN1 antisense RNA 1","termid":"PBO:0075660"}


id: PBO:0088691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family Noc4","termid":"PBO:0088691"}


id: PBO:0049929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase","termid":"PBO:0049929"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:25156118","PMID:23991286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: GO:2000039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of leaf development","termid":"GO:2000024"},{"relation_name":"regulates","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trichome morphogenesis","synonyms":[{"name":"regulation of trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:2000039"}


id: PBO:0113397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear/ER membrane association and activation of Pah1p, a phosphatidate phosphatase involved in the production of diacylglycerol DAG for lipid droplet biogenesis; phosphatase activity of the Nem1p-Spo7p complex is inhibited by Ice2p; regulates nuclear growth by controlling phospholipid biosynthesis; required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0113397"}


id: PBO:0052272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4F","termid":"PBO:0052272"}


id: GO:0003437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication that contributes to the shaping of the growth plate cartilage.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"part_of","term_name":"growth plate cartilage morphogenesis","termid":"GO:0003422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication involved in growth plate cartilage morphogenesis","termid":"GO:0003437"}


id: PBO:0062512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 1","termid":"PBO:0062512"}


id: GO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.","definition_xrefs":["PMID:12912988"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase activity, uncoupled (obsolete GO:0042624)","termid":"GO:0042624"}


id: GO:0102883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-beta-chamigrene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.78","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(+)-beta-chamigrene synthase activity","secondary_identifiers":["RHEA:30379","MetaCyc:RXN-8424"],"termid":"GO:0102883"}


id: GO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","termid":"GO:0032918"}


id: GO:0002721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of B cell cytokine production","synonyms":[{"name":"regulation of B lymphocyte cytokine production","type":"exact"},{"name":"regulation of B-cell cytokine production","type":"exact"},{"name":"regulation of B-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002721"}


id: GO:0035666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor where the TRIF adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:12855817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRIF-dependent toll-like receptor signaling pathway","synonyms":[{"name":"TRIF-dependent TLR signaling pathway","type":"exact"},{"name":"TRIF-dependent toll-like receptor signalling pathway","type":"exact"},{"name":"Toll/IL-1 receptor (TIR) domain-containing adaptor-dependent TLR signaling pathway","type":"exact"}],"termid":"GO:0035666"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0041866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 12 (gene/pseudogene)","termid":"PBO:0041866"}


id: GO:1904083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of epiboly.","definition_xrefs":["GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of epiboly (obsolete GO:1904083)","synonyms":[{"name":"regulation of epiboly","type":"exact"}],"termid":"GO:1904083"}


id: PBO:0057117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR202 host gene","termid":"PBO:0057117"}


id: PBO:0068337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 103","termid":"PBO:0068337"}


id: PBO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seipin homolog, involved in lipid catabolism (predicted)","termid":"PBO:0016539"}


id: GO:0009703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+.","definition_xrefs":["RHEA:17913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase (NADH) activity","secondary_identifiers":["MetaCyc:NITRATE-REDUCTASE-NADH-RXN","EC:1.7.1.1"],"synonyms":[{"name":"NADH-dependent nitrate reductase activity","type":"related"},{"name":"NADH-nitrate reductase activity","type":"related"},{"name":"NADH:nitrate oxidoreductase activity","type":"related"},{"name":"NADH:nitrate reductase activity","type":"exact"},{"name":"assimilatory NADH: nitrate reductase activity","type":"related"},{"name":"assimilatory NADH:nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate reductase (NADH(2)) activity","type":"related"},{"name":"nitrate reductase (NADH2)","type":"related"},{"name":"nitrite:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009703"}


id: PBO:0090048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase Cid11, terminal uridylyl transferase","termid":"PBO:0090048"}


id: GO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an eosinophil from the blood vessels into the surrounding tissue.","definition_xrefs":["GOC:BHF","CL:0000771","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil extravasation","termid":"GO:0072682"}


id: PBO:0066511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X7","termid":"PBO:0066511"}


id: PR:Q9UUI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.05","synonyms":[{"name":"Spom972h-SPAC22F8.05","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI7"}


id: PBO:0083774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear envelope integral membrane protein; interacts with chromatin, helping to maintain normal chromatin architecture and transcriptional regulation of certain loci at the nuclear envelope; interacts and functions with Apq12p and Brl1p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, nuclear envelope morphology, mRNA nuclear export, and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; homologous to Brl1p","termid":"PBO:0083774"}


id: PATO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's being covered or partially covered with scales.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaly","synonyms":[{"name":"squamous","type":"related"}],"termid":"PATO:0001804"}


id: PBO:0081290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 73, pseudogene","termid":"PBO:0081290"}


id: GO:0106289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of deadenylation-dependent decapping of nuclear-transcribed mRNA.","definition_xrefs":["PMID:32354837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106288"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0000290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA","termid":"GO:0106289"}


id: PBO:0076592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 13","termid":"PBO:0076592"}


id: PBO:0090984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3","termid":"PBO:0090984"}


id: PR:O14078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obg-like ATPase homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.13c","synonyms":[{"name":"OLA1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPACUNK4.13c","type":"exact"}],"termid":"PR:O14078"}


id: PBO:0036485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5","termid":"PBO:0036485"}


id: GO:1990363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of hydrolysate (any product of hydrolysis).","definition_xrefs":["PMID:23356676","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to hydrolysate (obsolete GO:1990363)","synonyms":[{"name":"response to hydrolysate","type":"exact"}],"termid":"GO:1990363"}


id: PBO:0028303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleolus","termid":"PBO:0028303"}


id: GO:1902459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["GOC:TermGenie","PMID:22969033","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"positively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell population maintenance","synonyms":[{"name":"activation of maintenance of pluripotency","type":"related"},{"name":"activation of stem cell maintenance","type":"narrow"},{"name":"positive regulation of maintenance of pluripotency","type":"related"},{"name":"up regulation of maintenance of pluripotency","type":"related"},{"name":"up regulation of stem cell maintenance","type":"exact"},{"name":"up-regulation of maintenance of pluripotency","type":"related"},{"name":"up-regulation of stem cell maintenance","type":"exact"},{"name":"upregulation of maintenance of pluripotency","type":"related"},{"name":"upregulation of stem cell maintenance","type":"exact"}],"termid":"GO:1902459"}


id: PBO:0089183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1","termid":"PBO:0089183"}


id: PBO:0089052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase family V, transmembrane protein dislocase/calcium transporting ATPase Cta4","termid":"PBO:0089052"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: PBO:0029125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_saccharopine_dehydrogenase_activity","termid":"PBO:0029125"}


id: GO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of the gene products having some covalently attached portion, for example part of a peptide sequence or some other covalently attached group such as a GPI anchor, which spans or is embedded in one or both leaflets of the membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of membrane (obsolete GO:0031224)","synonyms":[{"name":"intrinsic to membrane","type":"narrow"}],"termid":"GO:0031224"}


id: GO:0010538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of the Hsp27 molecular chaperone.","definition_xrefs":["PMID:11546764","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp27 protein regulator activity (obsolete GO:0010538)","synonyms":[{"name":"Hsp27 protein regulator activity","type":"exact"}],"termid":"GO:0010538"}


id: FYPO:0004575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:25398909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004575"}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: GO:0030850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.","definition_xrefs":["PMID:11839751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"urogenital system development","termid":"GO:0001655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland development","synonyms":[{"name":"prostate development","type":"exact"}],"termid":"GO:0030850"}


id: GO:0102534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin 4',7-dimethyl ether + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + ladanein + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:73435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"apigenin-7,4'-dimethyl ether 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14751"],"termid":"GO:0102534"}


id: GO:1901213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901213)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"}],"termid":"GO:1901213"}


id: GO:0007626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotory behavior","synonyms":[{"name":"behavior via locomotion","type":"exact"},{"name":"locomotion in response to stimulus","type":"exact"},{"name":"locomotory behavioral response to stimulus","type":"exact"},{"name":"locomotory behaviour","type":"exact"},{"name":"locomotory behavioural response to stimulus","type":"exact"}],"termid":"GO:0007626"}


id: GO:0022028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the telencephalon from the subventricular zone to the olfactory bulb in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"olfactory bulb development","termid":"GO:0021772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tangential migration from the subventricular zone to the olfactory bulb","synonyms":[{"name":"rostral migratory stream migration","type":"exact"}],"termid":"GO:0022028"}


id: GO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a leukocyte to vascular endothelial cell via adhesion molecules.","definition_xrefs":["GOC:BHF_miRNA","GOC:bc","GOC:add","GOC:BHF","PMID:23897866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}


id: PBO:0028574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_arginine_import","termid":"PBO:0028574"}


id: GO:0051465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of corticotropin-releasing hormone from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of corticotropin-releasing hormone secretion","termid":"GO:0043397"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"corticotropin-releasing hormone secretion","termid":"GO:0043396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of corticotropin-releasing hormone secretion","synonyms":[{"name":"down regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"down-regulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"downregulation of corticotropin-releasing hormone secretion","type":"exact"},{"name":"inhibition of corticotropin-releasing hormone secretion","type":"narrow"},{"name":"negative regulation of CRF secretion","type":"exact"},{"name":"negative regulation of CRH secretion","type":"exact"},{"name":"negative regulation of corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0051465"}


id: PR:000050532
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been monomethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00085.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me1:(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00085","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed monomethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me1:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00085","type":"broad"},{"name":"hhf2/Me1:(K20)","type":"exact"},{"name":"histone H4 K20me1 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050532"}


id: PBO:0067051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 72, pseudogene","termid":"PBO:0067051"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: GO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin F (PGF (2-alpha)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostaglandin F receptor activity","synonyms":[{"name":"PGF receptor activity","type":"related"},{"name":"PGF(2-alpha) receptor activity","type":"exact"}],"termid":"GO:0004958"}


id: PBO:0061615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 1","termid":"PBO:0061615"}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: GO:0140627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the DesCEND (destruction via C-end degron) pathway. In the DesCEND pathway, C-terminal residues (C-end degrons) in substrates are recognized by Cul2-RING and Cul4-RING E3 ligases, whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation. C-end degrons can be present in full-length proteins, truncated proteins or proteolytically cleaved forms.","definition_xrefs":["PMID:29775578","PMID:29779948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the C-end degron rule pathway","synonyms":[{"name":"DesCEND","type":"exact"}],"termid":"GO:0140627"}


id: PBO:0018242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med13","termid":"PBO:0018242"}


id: GO:0017105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11Z)-delta-11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:25852","PMID:15544945","PMID:15063718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA delta11-(Z)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.32-RXN","EC:1.14.19.5","GO:0050601"],"synonyms":[{"name":"Z/E11-desaturase","type":"broad"},{"name":"acyl-CoA D11-desaturase activity","type":"exact"},{"name":"acyl-CoA delta(11)-desaturase activity","type":"exact"},{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"delta(11) desaturase","type":"broad"},{"name":"delta(11)-fatty-acid desaturase","type":"broad"},{"name":"delta(11)-palmitoyl-CoA desaturase","type":"narrow"},{"name":"fatty acid delta(11)-desaturase","type":"broad"},{"name":"myristoyl-CoA 11-(Z) desaturase activity","type":"narrow"}],"termid":"GO:0017105"}


id: GO:1990007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A configuration of endoplasmic reticulum (ER) found in Purkinje cells in the cerebellum and in axons in the lateral vestibular nucleus, consisting of parallel and interconnecting tubules whose outer surfaces are covered by particles or ringlike structures.","definition_xrefs":["ISBN:9780195065718","NIF_Subcellular:sao2114874506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"membrane stack","termid":"GO:1990007"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: FYPO:0009034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethylenediaminetetraacetic acid than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethylenediaminetetraacetic acid","synonyms":[{"name":"resistance to ethylenediaminetetraacetic acid during mitotic cell cycle","type":"related"},{"name":"resistance to ethylenediaminetetraacetic acid during vegetative growth","type":"exact"},{"name":"resistant to ethylenediaminetetraacetic acid","type":"exact"}],"termid":"FYPO:0009034"}


id: PBO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1 (predicted)","termid":"PBO:0032766"}


id: PBO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulator Est1","termid":"PBO:0004294"}


id: PBO:0051134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-6 (pseudogene)","termid":"PBO:0051134"}


id: FYPO:0003485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biosynthesis of DNA does not occur.","definition_xrefs":["PomBase:mah","GO:0071897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished DNA synthesis","synonyms":[{"name":"abolished DNA biosynthesis","type":"exact"},{"name":"abolished DNA biosynthetic process","type":"exact"},{"name":"abolished DNA synthesis during mitotic cell cycle","type":"related"},{"name":"abolished DNA synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0003485"}


id: GO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stacks of endoplasmic reticulum (ER) membranes containing a high density of nuclear pores, thought to form from excess nuclear membrane components, that have been described in a number of different cells. Annulate lamellar membranes are continuous with and embedded within the ER.","definition_xrefs":["PMID:12631728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annulate lamellae","termid":"GO:0005642"}


id: GO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(alpha-D-mannosyl)-beta-D-mannosyl-R + UDP-N-acetyl-alpha-D-glucosamine = 3-(2-[N-acetyl-beta-D-glucosaminyl]-alpha-D-mannosyl)-beta-D-mannosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.101","RHEA:11456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-964768","KEGG_REACTION:R05983","MetaCyc:2.4.1.101-RXN"],"synonyms":[{"name":"GNTI activity","type":"related"},{"name":"GnTI","type":"related"},{"name":"N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-1,3-D-mannoside-beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003827"}


id: PATO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001211 solid_angle_quantity (obsolete PATO:0001211)","termid":"PATO:0001211"}


id: PBO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1","termid":"PBO:0090241"}


id: PBO:0028881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation","termid":"PBO:0028881"}


id: PBO:0079456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 1, U6 snRNA-specific","termid":"PBO:0079456"}


id: PBO:0109653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory MKL1 (MRTFA) interacting lncRNA","termid":"PBO:0109653"}


id: PBO:0061916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 4","termid":"PBO:0061916"}


id: GO:0080108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.","definition_xrefs":["PMID:14871316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-alkylthiohydroximate lyase activity","synonyms":[{"name":"S-alkylthiohydroximate C-S lyase activity","type":"narrow"}],"termid":"GO:0080108"}


id: PBO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog","termid":"PBO:0016585"}


id: GO:0042278
data:
  {"annotated_genes":["SJAG_00134","SJAG_03881","SJAG_01859","SJAG_02582","SJAG_04927","SJAG_01359","SJAG_02959","SJAG_00044","SJAG_06634","SJAG_00885","SJAG_03096","SJAG_01070","SJAG_02580","SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103263],"is_not":false,"summary":null,"term":"GO:0042278"},{"annotations":[84949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83662,83661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[109712,86599,109713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[112856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[104499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[86709,108176,87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[111840,85843,89579,89802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04927":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine metabolic process","type":"broad"},{"name":"purine metabolism","type":"broad"},{"name":"purine nucleoside metabolism","type":"exact"}],"termid":"GO:0042278","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0042278":null,"GO:0046085":null,"GO:0046086":null}}


id: PBO:0055364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2793","termid":"PBO:0055364"}


id: PBO:0058826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8056","termid":"PBO:0058826"}


id: PBO:0031178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut","termid":"PBO:0031178"}


id: GO:0007259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell surface receptor signaling pathway in which ligand binding causes the receptor to dimerize, bringing the receptor-associated JAKs into close proximity. The JAKs then phosphorylate and activate each other on tyrosine residues.This leads to the activation of associated STAT protein, causing the STATs to dissociate from the receptor, translocate to the nucleus. The pathway ends with regulation of target gene expression by STAT proteins.","definition_xrefs":["PMID:12039028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor signaling pathway via JAK-STAT","secondary_identifiers":["Wikipedia:JAK-STAT_signaling_pathway"],"synonyms":[{"name":"JAK-STAT cascade","type":"narrow"},{"name":"JAK-STAT signal transduction","type":"exact"},{"name":"receptor signaling pathway via JAK-STAT","type":"exact"}],"termid":"GO:0007259"}


id: PBO:0053509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 494","termid":"PBO:0053509"}


id: PBO:0089974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease","termid":"PBO:0089974"}


id: GO:0120022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the glucagon family peptide hormone (e.g. glucagon, glucagon-like peptides, oxyntomodulin, glicentin, ADCYAP1, GHRH, secretin, VIP, GIP).","definition_xrefs":["PMID:17715056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glucagon family peptide binding","secondary_identifiers":["GO:0120024"],"synonyms":[{"name":"glucagon binding","type":"narrow"},{"name":"glucagon-like peptide binding","type":"narrow"}],"termid":"GO:0120022"}


id: PBO:0089922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25","termid":"PBO:0089922"}


id: GO:0046315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphocreatine, a phosphagen of creatine which is synthesized and broken down by creatine phosphokinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphocreatine metabolic process","termid":"GO:0006603"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphocreatine catabolic process","synonyms":[{"name":"phosphocreatine breakdown","type":"exact"},{"name":"phosphocreatine catabolism","type":"exact"},{"name":"phosphocreatine degradation","type":"exact"}],"termid":"GO:0046315"}


id: PBO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 3","termid":"PBO:0045257"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: FYPO:0009106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the divided nuclei are located closer to the cell equator during telophase of the mitotic cell cycle when compared to wild-type cells.","definition_xrefs":["PMID:37099380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during mitotic telophase","termid":"FYPO:0009105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"nucleus mislocalized towards cell equator during mitotic telophase","synonyms":[{"name":"nuclear displaced towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displaced towards cytokinetic ring during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cell equator during mitotic telophase","type":"exact"},{"name":"nuclear displacement towards cytokinetic ring during mitotic telophase","type":"exact"}],"termid":"FYPO:0009106"}


id: PBO:0066045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 1","termid":"PBO:0066045"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: PBO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 2","termid":"PBO:0045580"}


id: FYPO:0002852
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to cell end during vegetative growth","type":"exact"},{"name":"increased protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002852","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: PBO:0017613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination endonuclease Rec12","termid":"PBO:0017613"}


id: PBO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane 1-phosphatidylinositol 4-kinase, type III-alpha Stt4","termid":"PBO:0110107"}


id: PBO:0084419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication","termid":"PBO:0084419"}


id: GO:0048544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell recognition process in which pollen is recognized and either accepted or rejected by cells in the stigma.","definition_xrefs":["GOC:dph","GOC:pj","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"recognition of pollen","secondary_identifiers":["GO:0009857"],"synonyms":[{"name":"pollen recognition","type":"exact"},{"name":"recognition or rejection of self pollen","type":"related"},{"name":"self incompatibility","type":"related"}],"termid":"GO:0048544"}


id: FYPO:0007513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly greater than the range in wild type cells.","definition_xrefs":["PMID:17690116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased rDNA copy number during vegetative growth","synonyms":[{"name":"increased copy number of rDNA repeats","type":"exact"},{"name":"increased copy number of rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased rDNA copy number during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007513"}


id: GO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an integrin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"},{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"integrin binding","synonyms":[{"name":"integrin ligand","type":"narrow"}],"termid":"GO:0005178"}


id: PBO:0028719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_monopolar_index","termid":"PBO:0028719"}


id: PBO:0073070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDCBP2 antisense RNA 1","termid":"PBO:0073070"}


id: PBO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 11","termid":"PBO:0043475"}


id: PBO:0029354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromosome_at_long_terminal_repeat","termid":"PBO:0029354"}


id: PBO:0086092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase that regulates the mating response; negatively regulates the MAP kinase signaling cascade during mating; member of the serine/threonine phosphatase PP1 family","termid":"PBO:0086092"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:21382270","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: PBO:0064970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 26","termid":"PBO:0064970"}


id: GO:1902073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hypoxia-inducible factor-1alpha signaling pathway.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:21685248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:1902071"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"hypoxia-inducible factor-1alpha signaling pathway","termid":"GO:0097411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"activation of HIF1alpha pathway","type":"exact"},{"name":"activation of hypoxia-inducible factor-1alpha signaling pathway","type":"narrow"},{"name":"activation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"hypoxic stabilization of HIF1A","type":"narrow"},{"name":"positive regulation of HIF1alpha pathway","type":"exact"},{"name":"positive regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"up regulation of HIF1alpha pathway","type":"exact"},{"name":"up regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"up regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"up-regulation of HIF1alpha pathway","type":"exact"},{"name":"up-regulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"up-regulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"},{"name":"upregulation of HIF1alpha pathway","type":"exact"},{"name":"upregulation of hypoxia-inducible factor-1alpha signaling pathway","type":"exact"},{"name":"upregulation of hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:1902073"}


id: FYPO:0005367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0005367"}


id: PBO:0056825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14C, pseudogene","termid":"PBO:0056825"}


id: PBO:0051395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 3","termid":"PBO:0051395"}


id: PBO:0029699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_mononucleate_vegetative_cell","termid":"PBO:0029699"}


id: GO:0140774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-octadecanoyl-L-lysyl-[protein] + NAD+ + H2O = octadecanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["PMID:23552949","RHEA:70563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"NAD-dependent protein depalmitoylase activity","termid":"GO:0140774"}


id: PBO:0090038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Sfp1","termid":"PBO:0090038"}


id: PBO:0044707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 6 pseudogene 1","termid":"PBO:0044707"}


id: PBO:0076137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 pseudogene 2","termid":"PBO:0076137"}


id: PBO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase sububit Gem1 (predicted)","termid":"PBO:0014302"}


id: PBO:0074480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD specific E3 ubiquitin protein ligase 2","termid":"PBO:0074480"}


id: GO:1990146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a rhabdomere.","definition_xrefs":["GOC:sart","PMID:8335687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to rhabdomere","termid":"GO:1990146"}


id: PBO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_calcium_level_during_cellular_response_to_salt_stress","termid":"PBO:0030857"}


id: GO:0022628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The large subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid large ribosomal subunit","termid":"GO:0000311"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast large ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal LSU complex","type":"exact"},{"name":"chloroplast ribosomal large subunit complex","type":"exact"}],"termid":"GO:0022628"}


id: GO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion transport","termid":"GO:0003096"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"renal sodium ion absorption","synonyms":[{"name":"nephron sodium ion absorption","type":"exact"},{"name":"renal sodium ion reabsorption","type":"exact"}],"termid":"GO:0070294"}


id: SO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A scaRNA possessing a box H/ACA sequence motif, guiding the pseudouridylation of snRNAs.","definition_xrefs":["PMID:17099227","PMID:24659245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scaRNA","termid":"SO:0002095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_scaRNA","synonyms":[{"name":"H/ACA scaRNA","type":"exact"}],"termid":"SO:0002370"}


id: PBO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic ORF","termid":"PBO:0005880"}


id: PR:O13807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA damage-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00829","PANTHER:PTHR10644:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.10c","secondary_identifiers":["UniProtKB:O13807"],"synonyms":[{"name":"Spom972h-DDB1","type":"exact"},{"name":"damage-specific DNA-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13807"}


id: PBO:0090269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP II complex subunit Trs65","termid":"PBO:0090269"}


id: GO:1905158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Factor XII activation.","definition_xrefs":["PMID:617517","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Factor XII activation (obsolete GO:1905158)","synonyms":[{"name":"regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905158"}


id: PBO:0071134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 136","termid":"PBO:0071134"}


id: PBO:0069972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1267, pseudogene","termid":"PBO:0069972"}


id: PBO:0041540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 98","termid":"PBO:0041540"}


id: PR:Q10423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cce1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform cutting endonuclease 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.02","synonyms":[{"name":"Spom972h-cce1","type":"exact"},{"name":"protein ydc2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10423"}


id: PATO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001204 not enlarged (obsolete PATO:0001204)","termid":"PATO:0001204"}


id: GO:0075227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of encysted zoospore germination","synonyms":[{"name":"modulation of encysted zoospore germination on or near host","type":"exact"},{"name":"regulation of encysted zoospore germination on or near host","type":"narrow"}],"termid":"GO:0075227"}


id: GO:0006072
data:
  {"annotated_genes":["SJAG_01012","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102492,90028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046168"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycerol-3-phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerol-3-phosphate metabolism","type":"exact"}],"termid":"GO:0006072","terms_by_termid":{"GO:0046168":null}}


id: GO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phospholipid, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent phospholipid binding","termid":"GO:0005544"}


id: GO:0097143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of PUMA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PUMA-BCL-xl complex","termid":"GO:0097143"}


id: GO:0160127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that rescues stalled ribosomes by removing the covalent cross-link between RNA and a protein.","definition_xrefs":["PMID:37951216","PMID:37951215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rescue of stalled ribosome","termid":"GO:0072344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein-RNA covalent cross-linking repair","termid":"GO:0160127"}


id: PBO:0057525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 642b","termid":"PBO:0057525"}


id: PBO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn11","termid":"PBO:0001838"}


id: MOD:00332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glucosyl-arginine.","definition_xrefs":["PubMed:9536051","Unimod:41#R","PubMed:8521968","RESID:AA0327","PubMed:15279557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"omega-N-glycosyl-L-arginine","termid":"MOD:01980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"omega-N-glucosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc) arginine","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:00332"}


id: PBO:0059746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 20","termid":"PBO:0059746"}


id: PBO:0076523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 36","termid":"PBO:0076523"}


id: PBO:0065811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3 GTPase activating protein catalytic subunit 1","termid":"PBO:0065811"}


id: PBO:0065233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 1","termid":"PBO:0065233"}


id: GO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"myofibril assembly","termid":"GO:0030239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sarcomere organization","secondary_identifiers":["GO:0006938"],"synonyms":[{"name":"sarcomere alignment","type":"exact"},{"name":"sarcomere organisation","type":"exact"}],"termid":"GO:0045214"}


id: PBO:0075175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 5","termid":"PBO:0075175"}


id: PBO:0113134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; inhibits Bnr1p-mediated actin filament nucleation but not elongation during vegetative growth; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; spatially focuses Bni1p at mating projection tips, and with Bud6p organizes Bni1p into clusters that nucleate actin assembly during mating projection formation; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0113134"}


id: GO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gonadotropin complex","termid":"GO:0061696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"follicle-stimulating hormone complex","synonyms":[{"name":"FSH complex","type":"exact"},{"name":"follicle stimulating hormone complex","type":"exact"}],"termid":"GO:0016914"}


id: GO:0160171
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=28 symmetry.","definition_xrefs":["VZ:6057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=28 icosahedral capsid","termid":"GO:0160171"}


id: PBO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.45","termid":"PBO:0002197"}


id: PBO:0044328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 8","termid":"PBO:0044328"}


id: GO:0050910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of sound vibration in which the vibration is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of sound","termid":"GO:0007605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of sound","secondary_identifiers":["GO:0009592","GO:0055128"],"synonyms":[{"name":"detection of sound","type":"exact"},{"name":"hearing, sensory transduction of sound","type":"exact"},{"name":"perception of sound, detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of sound","type":"exact"}],"termid":"GO:0050910"}


id: PBO:0030414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistant_to_cell_wall_digestion","termid":"PBO:0030414"}


id: PBO:0003751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein (predicted)","termid":"PBO:0003751"}


id: GO:0070072
data:
  {"annotated_genes":["SJAG_04454","SJAG_06514","SJAG_00301","SJAG_05306","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98004,106162,109126,110197,114312],"is_not":false,"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex assembly","termid":"GO:0070070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"broad"},{"name":"V-ATPase complex assembly","type":"broad"}],"termid":"GO:0070072","terms_by_termid":{"GO:0070072":null}}


id: PBO:0028032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_chromosome_fragmentation_upon_segregation","termid":"PBO:0028032"}


id: GO:0033223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 2-aminoethylphosphonate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"2-aminoethylphosphonate transport","synonyms":[{"name":"2-phosphonoethylamine transport","type":"exact"},{"name":"ciliatine transport","type":"exact"}],"termid":"GO:0033223"}


id: PBO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 intronic transcript","termid":"PBO:0048195"}


id: PBO:0066271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member E","termid":"PBO:0066271"}


id: GO:0141208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-lactoyl-L-lysyl-[protein] + NAD = L-lysyl-[protein] + nicotinamide +2''-O-lactoyl-ADP-D-ribose, removing a lactoyl group attached to a lysine residue in a protein.","definition_xrefs":["PMID:38512451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0033558","GO:0019213","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein lysine delactylase activity","termid":"GO:0141208"}


id: PBO:0065174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokineticin receptor 2","termid":"PBO:0065174"}


id: PBO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 15","termid":"PBO:0060281"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:add","GOC:mah","PMID:1931959","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: PBO:0078740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog A","termid":"PBO:0078740"}


id: GO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to luteinizing hormone","termid":"GO:0034699"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to luteinizing hormone stimulus","termid":"GO:0071373"}


id: GO:0030487
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104303],"is_not":false,"summary":null,"term":"GO:0030487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol-4,5-bisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030487","terms_by_termid":{"GO:0030487":null}}


id: PBO:0030685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_morphology","termid":"PBO:0030685"}


id: PBO:0111808
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0111808"}


id: GO:0140985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemorepellent and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:30462573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled chemorepellent receptor activity","synonyms":[{"name":"G protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein chemorepellent receptor activity","type":"exact"},{"name":"G-protein coupled chemorepellent receptor activity","type":"exact"}],"termid":"GO:0140985"}


id: PBO:0027182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere_outer_repeat","termid":"PBO:0027182"}


id: PBO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 3","termid":"PBO:0047646"}


id: PBO:0028624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_assembly","termid":"PBO:0028624"}


id: GO:1902507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of thiazole synthase activity.","definition_xrefs":["GOC:bhm","PMID:12650933","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"thiazole synthase complex","termid":"GO:1902507"}


id: GO:0034923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-4,5-dicarboxylate + H+ = phenanthrene-4-carboxylate + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-4,5-dicarboxylate decarboxylase activity (obsolete GO:0034923)","termid":"GO:0034923"}


id: SO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partially_duplicated_transcript where the 5' end of the transcript is duplicated.","direct_ancestors":[{"relation_name":"is_a","term_name":"partially_duplicated_transcript","termid":"SO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_duplicated_transcript","synonyms":[{"name":"5' duplicated transcript","type":"exact"},{"name":"five prime duplicated transcript","type":"exact"},{"name":"five prime partially duplicated transcript","type":"exact"}],"termid":"SO:0002245"}


id: PBO:0074301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1A-SULT1A3 readthrough (NMD candidate)","termid":"PBO:0074301"}


id: PBO:0111423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo7","termid":"PBO:0111423"}


id: GO:0043048
data:
  {"annotated_genes":["SJAG_04231"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113822],"is_not":false,"summary":null,"term":"GO:0043048"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a phosphorylated dolichol derivative.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dolichyl monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dolichyl monophosphate anabolism","type":"exact"},{"name":"dolichyl monophosphate biosynthesis","type":"exact"},{"name":"dolichyl monophosphate formation","type":"exact"},{"name":"dolichyl monophosphate synthesis","type":"exact"}],"termid":"GO:0043048","terms_by_termid":{"GO:0043048":null}}


id: GO:0048574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change from the vegetative to the reproductive phase as a result of detection of, or exposure to, a period of light that exceeds the critical day length. The critical day length varies between species. Although the term is long-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness falls short of the number of hours defined by 24 minus the critical day length.","definition_xrefs":["GOC:jid","ISBN:0709408862","GOC:pj","ISBN:0582015952","ISBN:0697037754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-day photoperiodism","termid":"GO:0048571"},{"relation_name":"is_a","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-day photoperiodism, flowering","synonyms":[{"name":"long-day photoperiodic control of flowering","type":"exact"},{"name":"long-day photoperiodic control of flowering time","type":"exact"},{"name":"long-day photoperiodic control of inflorescence development","type":"exact"},{"name":"response to long-day, flowering","type":"exact"},{"name":"response to short-night, flowering","type":"exact"},{"name":"short-night photoperiodism, flowering","type":"exact"}],"termid":"GO:0048574"}


id: GO:0102396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-cis-10'-apo-beta-carotenal + 2 O2 = carlactone + (2E,4E,6E)-7-hydroxy-4-methylhepta-2,4,6-trienal.","definition_xrefs":["GOC:pz","EC:1.13.11.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"9-cis-10'-apo-beta-carotenal cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-13643","RHEA:34403"],"termid":"GO:0102396"}


id: PBO:0087743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087743"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: PBO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain protein","termid":"PBO:0004447"}


id: GO:0009412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heavy metal stimulus. Heavy metals are those metals that can form a coordination bond with a protein; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete response to heavy metal (obsolete GO:0009412)","synonyms":[{"name":"response to heavy metal","type":"exact"}],"termid":"GO:0009412"}


id: PBO:0057803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3125","termid":"PBO:0057803"}


id: SO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_DNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded DNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_DNA_viral_sequence","synonyms":[{"name":"double stranded DNA virus","type":"exact"},{"name":"ds DNA viral sequence","type":"exact"}],"termid":"SO:0001198"}


id: PBO:0028590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_growth","termid":"PBO:0028590"}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["EC:4.1.2.43","RHEA:25201","MetaCyc:R10-RXN"],"termid":"GO:0043801"}


id: PBO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 13","termid":"PBO:0070642"}


id: GO:0048225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of fatty acid-derived polymers, including both aromatic and aliphatic components. The suberin network is found in specialized plant cell walls, where it is laid down between the primary wall and plasma membrane, forms protective and wound-healing layers, and provides a water-impermeable diffusion barrier.","definition_xrefs":["PMID:7706282","GOC:jid","GOC:mah","PMID:18440267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"suberin network","termid":"GO:0048225"}


id: GO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing immature T cells which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive T cell selection","synonyms":[{"name":"positive T lymphocyte selection","type":"exact"},{"name":"positive T-cell selection","type":"exact"},{"name":"positive T-lymphocyte selection","type":"exact"}],"termid":"GO:0043368"}


id: GO:0102633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flaviolin-2-olate + NADH + H+ + O2 = mompain + NAD + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"flaviolin monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-15585"],"termid":"GO:0102633"}


id: PBO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6 pseudogene 1","termid":"PBO:0075234"}


id: PBO:0076162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1P4-STRA6LP-CCDC180 readthrough","termid":"PBO:0076162"}


id: PBO:0080309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 73 pseudogene","termid":"PBO:0080309"}


id: FYPO:0001711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product do not last as long as in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"destabilized iron-sulfur cluster binding","synonyms":[{"name":"decreased duration of iron-sulfur cluster binding","type":"exact"},{"name":"destabilised iron-sulfur cluster binding","type":"exact"},{"name":"destabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001711"}


id: PBO:0060251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 1","termid":"PBO:0060251"}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: PBO:0080296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 60 pseudogene","termid":"PBO:0080296"}


id: MOD:01801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to an L-serinium (protonated L-serine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-serine (L-serinium) residue","termid":"MOD:01801"}


id: PBO:0071984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 13","termid":"PBO:0071984"}


id: PBO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome","termid":"PBO:0003796"}


id: GO:0048011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by neurotrophin binding to its receptor on the surface of a target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["Wikipedia:Trk_receptor","GOC:bf","GOC:ceb","PMID:12065629","GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"is_a","term_name":"neurotrophin signaling pathway","termid":"GO:0038179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotrophin TRK receptor signaling pathway","synonyms":[{"name":"TrkA signaling pathway","type":"narrow"},{"name":"TrkB signaling pathway","type":"narrow"},{"name":"TrkC signaling pathway","type":"narrow"},{"name":"tropomyosin-receptor-kinase signaling","type":"exact"}],"termid":"GO:0048011"}


id: PBO:0030812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_anisomycin","termid":"PBO:0030812"}


id: PBO:0072434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 8","termid":"PBO:0072434"}


id: PBO:0078648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-4","termid":"PBO:0078648"}


id: PBO:0055701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH divergent transcript","termid":"PBO:0055701"}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"},{"relation_name":"is_a","term_name":"O-decanoyltransferase activity","termid":"GO:0034325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"alcohol O-decanoyltransferase activity","termid":"GO:0034322"}


id: PBO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9","termid":"PBO:0052232"}


id: GO:0044177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell Golgi apparatus","synonyms":[{"name":"host Golgi apparatus","type":"exact"}],"termid":"GO:0044177"}


id: FYPO:0001809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of guanine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal guanine import","synonyms":[{"name":"abnormal guanine import across plasma membrane","type":"exact"},{"name":"abnormal guanine import during mitotic cell cycle","type":"related"},{"name":"abnormal guanine import during vegetative growth","type":"exact"},{"name":"abnormal guanine import into cell","type":"exact"},{"name":"abnormal guanine uptake","type":"exact"}],"termid":"FYPO:0001809"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0082244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of fatty acid synthetase; complex catalyzes the synthesis of long-chain saturated fatty acids; contains the acyl-carrier protein domain and beta-ketoacyl reductase, beta-ketoacyl synthase and self-pantetheinylation activities","termid":"PBO:0082244"}


id: GO:0160136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(516) in 16S rRNA = pseudouridine(516) in 16S rRNA.","definition_xrefs":["EC:5.4.99.19","RHEA:38867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"16S rRNA pseudouridine(516) synthase activity","termid":"GO:0160136"}


id: SO:0000130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated after it has been translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post_translationally_regulated","synonyms":[{"name":"post translationally regulated","type":"exact"},{"name":"post-translationally regulated","type":"exact"}],"termid":"SO:0000130"}


id: PBO:0061245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA activated by DNA damage","termid":"PBO:0061245"}


id: PBO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 10","termid":"PBO:0072193"}


id: FYPO:0002398
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actin cytoskeleton during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_04703"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta","for3delta"],"synonyms":[{"name":"abnormal actin cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton physical object quality during vegetative growth","type":"exact"}],"termid":"FYPO:0002398","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0078988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (TTA) 1-1","termid":"PBO:0078988"}


id: MOD:00540
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 9x(13)C labeled residue.","definition_xrefs":["PubMed:12716131","Unimod:184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled residue","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:00540"}


id: GO:0044839
data:
  {"annotated_genes":["SJAG_02098","SJAG_00364","SJAG_02074","SJAG_03602","SJAG_01076","SJAG_01044","SJAG_00117","SJAG_00256","SJAG_02592","SJAG_04280","SJAG_04597","SJAG_02332","SJAG_01837","SJAG_04287","SJAG_01010","SJAG_01873","SJAG_03126","SJAG_01680","SJAG_03927","SJAG_00526","SJAG_02563","SJAG_01805","SJAG_01146","SJAG_03695","SJAG_05373","SJAG_03309","SJAG_03067","SJAG_01084","SJAG_03854","SJAG_03592","SJAG_03160","SJAG_02576","SJAG_02266","SJAG_01605","SJAG_03026","SJAG_01118","SJAG_00214","SJAG_03486","SJAG_06592","SJAG_00082","SJAG_02858","SJAG_01456","SJAG_01000","SJAG_03048","SJAG_04486","SJAG_04671","SJAG_04140","SJAG_02392","SJAG_00600","SJAG_04332","SJAG_02723","SJAG_00216","SJAG_01429","SJAG_02342","SJAG_03942","SJAG_02771","SJAG_04394","SJAG_00640","SJAG_01901","SJAG_00883","SJAG_01205","SJAG_00318","SJAG_01855","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98377,107436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000086"},{"annotations":[112064,87476,102604],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[97454,90457,112007,96557,86057],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0044878"},{"annotations":[88570,89990,90012,102607,103836,108036,112820,112066,87477,96558,113280,105314,95214,95380,99334,113111,85187],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033314"},{"annotations":[91891,90590,112009,94463],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031569"},{"annotations":[110265,96559,107733,95381,87839,113030,113708,102608,84619,87478,85188,105315,86272,97075,89992],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0007095"},{"annotations":[110266,90418,107826,91893,104569,89251,100503,88966,107567,107438,102642,103012,97019,86058,89605,108482,112010,110471],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010972"},{"annotations":[107568,112011],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[84124,104571,90421,112501,107205,90592,99505,92369,97778,106341,89847,103235,84133,94464,90459,88180,95021,112691,87778],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010971"},{"annotations":[97404,83930],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905287"},{"annotations":[90593],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[107967,98410,107207],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010389"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G2 phase commits to M phase.","definition_xrefs":["GOC:jl","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00318":null,"SJAG_00364":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01118":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01456":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_01901":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02771":null,"SJAG_02858":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03695":null,"SJAG_03854":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04394":null,"SJAG_04486":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_05373":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044839","terms_by_termid":{"GO:0000086":null,"GO:0007095":null,"GO:0010389":null,"GO:0010971":null,"GO:0010972":null,"GO:0031569":null,"GO:0033314":null,"GO:0033315":null,"GO:0044878":null,"GO:0110031":null,"GO:0110032":null,"GO:1905287":null}}


id: GO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + (15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate = NAD(P)H + H+ + 15-oxo-5,8,11-cis-13-trans-icosatetraenoate.","definition_xrefs":["MetaCyc:1.1.1.232-RXN","EC:1.1.1.232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"15-hydroxyicosatetraenoate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161789"],"synonyms":[{"name":"(15S)-15-hydroxy-5,8,11-cis-13-trans-icosatetraenoate:NAD(P)+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxyeicosatetraenoate dehydrogenase activity","type":"related"}],"termid":"GO:0047034"}


id: PBO:0049296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase kappa 1","termid":"PBO:0049296"}


id: PBO:0059360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S17 pseudogene 6","termid":"PBO:0059360"}


id: MOD:01267
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:11746907","PubMed:15549660","Unimod:271#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site K","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01267"}


id: PBO:0086832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication","termid":"PBO:0086832"}


id: PBO:0047285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group L","termid":"PBO:0047285"}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: PBO:0082977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin reductase; key regulatory enzyme that determines the redox state of the thioredoxin system, which acts as a disulfide reductase system and protects cells against both oxidative and reductive stress; protein abundance increases in response to DNA replication stress; TRR1 has a paralog, TRR2, that arose from the whole genome duplication","termid":"PBO:0082977"}


id: FYPO:0007786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell is longer than normal, and progression through the meiotic cell cycle is arrested at the G2/MI phase transition. A cell can elongate when arrested at the G2/MI transition if it overcomes the growth arrest that usually occurs.","definition_xrefs":["PomBase:jh","PomBase:mah","PMID:28476936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at meiotic G2/MI transition","termid":"FYPO:0007785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell with cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"elongated cell with abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"elongated cell with abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"elongated cell with abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"},{"name":"elongated cells during meiotic G2/M1 arrest","type":"exact"},{"name":"elongated cells during meiotic G2/MI arrest","type":"exact"},{"name":"long cell with cell cycle arrest at meiotic G2/MI transition","type":"exact"}],"termid":"FYPO:0007786"}


id: PBO:0027755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0027755"}


id: PATO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000101 soil nutrient sensitivity (obsolete PATO:0000101)","termid":"PATO:0000101"}


id: PBO:0065516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 1 pseudogene","termid":"PBO:0065516"}


id: PBO:0078813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA nucleotidyl transferase 1","termid":"PBO:0078813"}


id: PBO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerol phosphate phosphatase Gep4 (predicted)","termid":"PBO:0034808"}


id: GO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme a, a derivative of heme found in cytochrome aa3.","definition_xrefs":["GOC:curators","PMID:28352909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme a metabolic process","termid":"GO:0046160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme a catabolic process","synonyms":[{"name":"haem a catabolic process","type":"exact"},{"name":"haem a catabolism","type":"exact"},{"name":"heme a breakdown","type":"exact"},{"name":"heme a catabolism","type":"exact"},{"name":"heme a degradation","type":"exact"}],"termid":"GO:0046161"}


id: PATO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's layered configuration.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratification","termid":"PATO:0002067"}


id: SO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 120th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK120_acetylation_site","synonyms":[{"name":"H2BK120 acetylation site","type":"exact"},{"name":"H2BK120ac","type":"exact"}],"termid":"SO:0001940"}


id: GO:0110009
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101143],"is_not":false,"summary":null,"term":"GO:0110009"},{"annotations":[104137,112190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a formin-nucleated actin cable.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"formin-nucleated actin cable organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110009","terms_by_termid":{"GO:0070649":null,"GO:0110009":null}}


id: PR:Q10290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mal2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein mal2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.14","synonyms":[{"name":"Spom972h-mal2","type":"exact"},{"name":"sim4 complex subunit mal2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10290"}


id: GO:0042059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"negative regulation of ERBB signaling pathway","termid":"GO:1901185"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042059"}


id: GO:0042625
data:
  {"annotated_genes":["SJAG_01397","SJAG_02023","SJAG_01447","SJAG_04955","SJAG_01471","SJAG_02782","SJAG_03406","SJAG_01913","SJAG_00212","SJAG_04015","SJAG_00516","SJAG_00136","SJAG_05294","SJAG_01817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94941,84115,86224,95962,98686,105873,85915,88098,99926,114720,97659,91702,96038,92660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent ion transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to transmembrane movement of ions","type":"exact"},{"name":"ATPase coupled ion transmembrane transporter activity","type":"exact"}],"termid":"GO:0042625","terms_by_termid":{"GO:0046961":null}}


id: PBO:0058715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6843","termid":"PBO:0058715"}


id: PBO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-6, pseudogene","termid":"PBO:0052914"}


id: GO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin I","termid":"GO:0034697"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin I stimulus","termid":"GO:0071382"}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: SO:0000052
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000052 assortment_derived_deficiency (obsolete SO:0000052)","synonyms":[{"name":"assortment-derived_deficiency","type":"related"}],"termid":"SO:0000052"}


id: PBO:0074459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4","termid":"PBO:0074459"}


id: PBO:0062716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily M member 1","termid":"PBO:0062716"}


id: GO:0004377
data:
  {"annotated_genes":["SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112758],"is_not":false,"summary":null,"term":"GO:0004377"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP-alpha-D-mannose = an alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + 2 GDP + 2 H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->2)-D-mannosyl-D-mannose linkage.","definition_xrefs":["EC:2.4.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-5464","RHEA:29523"],"synonyms":[{"name":"GDP-D-mannose:D-Man-alpha-(1->3)-[D-Man-alpha-(1->6)]-D-Man-beta-(1->4)-D-GlcNAc-beta-(1->4)-D-GlcNAc-diphosphodolichol alpha-1,2-mannosyltransferase activity","type":"related"},{"name":"GDP-mannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"GDP-mannose:glycolipid 1,2-alpha-D-mannosyltransferase activity","type":"related"},{"name":"glycolipid 2-alpha-mannosyltransferase activity","type":"related"},{"name":"guanosine diphosphomannose-oligosaccharide-lipid mannosyltransferase activity","type":"related"},{"name":"oligosaccharide-lipid mannosyltransferase activity","type":"related"}],"termid":"GO:0004377","terms_by_termid":{"GO:0004377":null}}


id: GO:0005602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of six subunits of C1q, each formed of the three homologous polypeptide chains C1QA, C1QB, and C1QB, and tetramer of two C1QR and two C1QS polypeptide chains.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"complement component C1 complex","synonyms":[{"name":"complement component C1q complex","type":"narrow"}],"termid":"GO:0005602"}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: SO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe decrease in cds length that deletes one or more entire codons from the coding sequence but does not change any remaining codons.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_deletion","termid":"SO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conservative_inframe_deletion","synonyms":[{"name":"conservative decrease in CDS length","type":"related"},{"name":"conservative inframe deletion","type":"exact"}],"termid":"SO:0001825"}


id: PBO:0091229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dienelactone hydrolase family, implicated in cellular detoxification","termid":"PBO:0091229"}


id: PBO:0039017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylformamidase","termid":"PBO:0039017"}


id: MOD:01611
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN.","definition_xrefs":["RESID:AA0508","PubMed:17935335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-trihydrogen phosphate","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FMN","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links)","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links, pros nitrogen)","type":"exact"}],"termid":"MOD:01611"}


id: GO:1905948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + 3',5'-cyclic GMP(in) = ADP + phosphate + 3',5'-cyclic GMP(out).","definition_xrefs":["GOC:TermGenie","PMID:18310115","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type 3',5'-cyclic GMP transmembrane transporter activity","secondary_identifiers":["RHEA:66188"],"synonyms":[{"name":"3',5'-cyclic GMP transmembrane-transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 3',5'-cyclic GMP transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled 3',5'-cyclic GMP transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cGMP transmembrane transporter activity","type":"exact"}],"termid":"GO:1905948"}


id: GO:1903172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of carbon dioxide at the level of the cell.","definition_xrefs":["GOC:mr","PMID:16571594","GO_REF:0000072","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbon dioxide homeostasis (obsolete GO:1903172)","termid":"GO:1903172"}


id: PBO:0068466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 43, pseudogene","termid":"PBO:0068466"}


id: GO:0004864
data:
  {"annotated_genes":["SJAG_03272","SJAG_04627","SJAG_02380","SJAG_03309","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85447,86340],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[107382,95458,83933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140678","GO:0030234","GO:0098772","GO:0004857"],"is_obsolete":false,"name":"protein phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990681"],"synonyms":[{"name":"phosphoprotein phosphatase inhibitor activity","type":"exact"},{"name":"protein phosphatase 2 inhibitor activity","type":"narrow"},{"name":"protein phosphatase type 2A inhibitor activity","type":"narrow"}],"termid":"GO:0004864","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: GO:0160021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression by which developmental control passes from the maternal genome to the zygotic genome.","definition_xrefs":["PMID:19204068","PMID:32558204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"maternal-to-zygotic transition of gene expression","synonyms":[{"name":"MZT","type":"related"}],"termid":"GO:0160021"}


id: PATO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer is shaped like a narrow band; ligulate.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strap-shaped","termid":"PATO:0002430"}


id: PBO:0053874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1150","termid":"PBO:0053874"}


id: PBO:0049916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif 1","termid":"PBO:0049916"}


id: PBO:0069558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 830, pseudogene","termid":"PBO:0069558"}


id: PBO:0075602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOC domain containing 1","termid":"PBO:0075602"}


id: RO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x proper_distributary_of y iff x distributary_of y and x does not flow back into y","direct_ancestors":[{"relation_name":"is_a","term_name":"distributary_of","termid":"RO:0002377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proper_distributary_of","termid":"RO:0002382"}


id: PBO:0043615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 5","termid":"PBO:0043615"}


id: GO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.","definition_xrefs":["GOC:dph","GOC:tb","PMID:1270266","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina layer formation","synonyms":[{"name":"retinal lamination","type":"exact"},{"name":"retinal layer formation","type":"exact"}],"termid":"GO:0010842"}


