# terms

id: GO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized.","definition_xrefs":["GOC:dsf","GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system morphogenesis","synonyms":[{"name":"skeletal morphogenesis","type":"exact"}],"termid":"GO:0048705"}


id: GO:1901464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole metabolic process","termid":"GO:1901402"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"negatively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"down regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down regulation of tetrapyrrole formation","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"down-regulation of tetrapyrrole formation","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"downregulation of tetrapyrrole formation","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"inhibition of tetrapyrrole formation","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"negative regulation of tetrapyrrole formation","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901464"}


id: PBO:0088764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor, pleckstrin homology domain","termid":"PBO:0088764"}


id: GO:1990639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 3,4,5-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["PMID:11348594"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:1990639)","synonyms":[{"name":"inositol-3,4,5-trisphosphate 5-phosphatase activity","type":"exact"}],"termid":"GO:1990639"}


id: FYPO:0000796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased glycerol dehydrogenase activity","termid":"FYPO:0000796"}


id: PBO:0067957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 259","termid":"PBO:0067957"}


id: PBO:0028207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028207"}


id: GO:0019442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006520","GO:0006790","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"tryptophan catabolic process to acetyl-CoA","secondary_identifiers":["MetaCyc:TRYPTOPHAN-DEGRADATION-1"],"synonyms":[{"name":"tryptophan breakdown to acetyl-CoA","type":"exact"},{"name":"tryptophan degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019442"}


id: PBO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon like peptide 1 receptor","termid":"PBO:0048702"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["UniProtKB:Q9P7S3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: GO:1900914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octadecene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"regulates","term_name":"octadecene biosynthetic process","termid":"GO:1900682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of octadecene biosynthetic process","synonyms":[{"name":"regulation of 1-octadecene biosynthetic process","type":"exact"},{"name":"regulation of octadecene anabolism","type":"exact"},{"name":"regulation of octadecene biosynthesis","type":"exact"},{"name":"regulation of octadecene formation","type":"exact"},{"name":"regulation of octadecene synthesis","type":"exact"}],"termid":"GO:1900914"}


id: PBO:0005653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain protein","termid":"PBO:0005653"}


id: GO:1903314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen cycle metabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0071941","GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen cycle metabolic process","termid":"GO:1903314"}


id: PBO:0043772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX20 pseudogene 1","termid":"PBO:0043772"}


id: GO:2000623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:2000622"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"negative regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"negative regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"negative regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"negative regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000623"}


id: PBO:0028323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitochondrion","termid":"PBO:0028323"}


id: GO:0032603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of fractalkine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:12729461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"fractalkine production","secondary_identifiers":["GO:0050754","GO:0050756","GO:0050751"],"synonyms":[{"name":"ABCD-3 production","type":"exact"},{"name":"CX3CL1 production","type":"exact"},{"name":"fractalkine biosynthetic process","type":"narrow"},{"name":"fractalkine metabolic process","type":"narrow"},{"name":"neurotactin production","type":"exact"}],"termid":"GO:0032603"}


id: GO:0032198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the transposition of miniature inverted-repeat transposable elements (MITEs).","definition_xrefs":["GOC:jp","ISBN:1555812090"],"gene_count":0,"genotype_count":0,"name":"obsolete MITE transposition (obsolete GO:0032198)","termid":"GO:0032198"}


id: GO:0140240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron to neuron synapse of a pyramidal neuron in the entorhinal cortex onto a granule cell in the dentate gyrus of the hippocampus.","definition_xrefs":["PMID:22727665","PMID:29199135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perforant pathway to dendrate granule cell synapse","synonyms":[{"name":"perforant pathway to DG granule cell synapse","type":"exact"}],"termid":"GO:0140240"}


id: GO:0061617
data:
  {"annotated_genes":["SJAG_05241","SJAG_02028","SJAG_02002","SJAG_02501"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97721,103316,106014,110639],"is_not":false,"summary":null,"term":"GO:0061617"}]},"cv_name":"cellular_component","definition":"Mitochondrial inner membrane complex involved in maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane. In Saccharomyces cerevisiae the complex has six subunits: MIC10, MIC12, MIC19, MIC26, MIC27, and MIC60.","definition_xrefs":["PMID:21944719","PMID:24687277","PMID:22009199","GOC:dph","PMID:21987634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02002":null,"SJAG_02028":null,"SJAG_02501":null,"SJAG_05241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"MICOS complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Fcj1 complex","type":"exact"},{"name":"MINOS complex","type":"exact"},{"name":"MitOS complex","type":"exact"},{"name":"mitochondrial contact site and cristae organizing system","type":"exact"}],"termid":"GO:0061617","terms_by_termid":{"GO:0061617":null}}


id: PBO:0002971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16 (predicted)","termid":"PBO:0002971"}


id: PBO:0028213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_arsenic-containing_substance","termid":"PBO:0028213"}


id: PBO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 5","termid":"PBO:0072230"}


id: GO:0015005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Brilliant blue copper-containing protein of low molecular weight found in some bacteria; thought to transfer electrons to cytochrome oxidase. This definition includes pseudoazurin.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete azurin (obsolete GO:0015005)","synonyms":[{"name":"azurin","type":"exact"}],"termid":"GO:0015005"}


id: PBO:0059186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRFAP1 pseudogene 1","termid":"PBO:0059186"}


id: MOD:00857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alaninium (protonated L-alanine) residue to an N,N,N-trimethyl-L-alanine.","definition_xrefs":["PubMed:7715456","PubMed:3979397","Unimod:37#A","PubMed:12590383","PubMed:332162","PubMed:6778808"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated residue","termid":"MOD:01687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethyl-L-alanine (from L-alaninium)","synonyms":[{"name":"N2Me3Ala","type":"exact"}],"termid":"MOD:00857"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: PBO:0108930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 15, mitochondrial 12S rRNA N4-cytidine","termid":"PBO:0108930"}


id: PBO:0026744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_UV","termid":"PBO:0026744"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_03538","SJAG_04067","SJAG_02421","SJAG_04282","SJAG_03362","SJAG_02420","SJAG_00827","SJAG_04866","SJAG_00381","SJAG_02406","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90341,95544,103377,109597,109603,110016,112023],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[85105,109690],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[95547,106447,106446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:0006014
data:
  {"annotated_genes":["SJAG_03174","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85008],"is_not":false,"summary":null,"term":"GO:0006014"},{"annotations":[100363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ribose (ribo-pentose). As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_03174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-ribose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-ribose metabolism","type":"exact"}],"termid":"GO:0006014","terms_by_termid":{"GO:0006014":null,"GO:0019303":null}}


id: PBO:0063990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 24","termid":"PBO:0063990"}


id: PBO:0083276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2","termid":"PBO:0083276"}


id: PBO:0086948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recognition component (N-recognin) of the Pro/N-degron pathway; recognizes and targets for degradation proteins with N-terminal degradation signals; expressed only under starvation or osmotic stress","termid":"PBO:0086948"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: GO:0035935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"androgen secretion","termid":"GO:0035935"}


id: PBO:0050338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 40","termid":"PBO:0050338"}


id: GO:0042141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Exports diffusible peptide signals that are responsible for binding to other cells and triggering a series of responses to facilitate mating.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mating pheromone exporter (obsolete GO:0042141)","synonyms":[{"name":"mating pheromone exporter","type":"exact"}],"termid":"GO:0042141"}


id: PBO:0080351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 3, pseudogene","termid":"PBO:0080351"}


id: PBO:0055601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3037","termid":"PBO:0055601"}


id: PBO:0079932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen III synthase","termid":"PBO:0079932"}


id: PBO:0060435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 2","termid":"PBO:0060435"}


id: PBO:0048265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 3","termid":"PBO:0048265"}


id: PBO:0028378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028378"}


id: GO:0140645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a neutrophil extracellular trap, a network of extracellular fibers primarily composed of DNA from neutrophils, which bind and neutralizes pathogens.","definition_xrefs":["PMID:28267716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"neutrophic extracellular trap formation","secondary_identifiers":["http://purl.obolibrary.org/obo/TXPO_0002149"],"synonyms":[{"name":"NET formation","type":"broad"}],"termid":"GO:0140645"}


id: FYPO:0003216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at rDNA","termid":"FYPO:0000206"},{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at rDNA","synonyms":[{"name":"decreased chromatin silencing at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at rDNA during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at ribosomal DNA","type":"exact"},{"name":"reduced chromatin silencing at rDNA","type":"exact"}],"termid":"FYPO:0003216"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: PBO:0052270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4D","termid":"PBO:0052270"}


id: PBO:0027490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_oxidation","termid":"PBO:0027490"}


id: GO:0070904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of L-ascorbic acid from one side of an epithelium to the other.","definition_xrefs":["GOC:mah","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete transepithelial L-ascorbic acid transport (obsolete GO:0070904)","synonyms":[{"name":"transepithelial L-ascorbate transport","type":"exact"},{"name":"transepithelial vitamin C transport","type":"exact"}],"termid":"GO:0070904"}


id: PBO:0079213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific serine kinase 5, pseudogene","termid":"PBO:0079213"}


id: PR:Q9UTS7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.12","synonyms":[{"name":"L-asparagine amidohydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC977.12","type":"exact"}],"termid":"PR:Q9UTS7"}


id: GO:0052505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052505)","synonyms":[{"name":"induction by organism of defense-related symbiont cell wall callose deposition","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052505"}


id: PBO:0087888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor involved in regulating multidrug resistance; negatively regulates expression of the PDR5 gene; member of the Gal4p family of zinc cluster proteins","termid":"PBO:0087888"}


id: SO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding isoleucyl tRNA (SO:0000263).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine_tRNA_primary_transcript","synonyms":[{"name":"isoleucine tRNA primary transcript","type":"exact"}],"termid":"SO:0000220"}


id: SO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated at transcription.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_regulated","synonyms":[{"name":"transcriptionally regulated","type":"exact"}],"termid":"SO:0000123"}


id: GO:0033915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2) and (1->3) linkages in mannan, releasing mannose.","definition_xrefs":["EC:3.2.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"mannan 1,2-(1,3)-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.77-RXN"],"synonyms":[{"name":"1,2-1,3-alpha-D-mannan mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,3-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033915"}


id: GO:1990909
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein protein complex containing membrane-localized Wnt receptors and cytosolic protein complexes, which is capable of transmitting the Wnt signal. Contains at least a Wnt protein, LRP5 or LRP6, a member of the Frizzled (Fz) family, Axin and and a Dishevelled (DVL) protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25336320","PMID:22899650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Wnt signalosome","synonyms":[{"name":"LRP5/6 signalosome","type":"exact"},{"name":"LRP6 signalosome","type":"narrow"},{"name":"Wnt signalosome complex","type":"exact"},{"name":"Wnt-LRP5/6 signalosome","type":"exact"}],"termid":"GO:1990909"}


id: PBO:0064840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B","termid":"PBO:0064840"}


id: GO:0021666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 5. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 5 morphogenesis","termid":"GO:0021664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 formation","termid":"GO:0021666"}


id: PBO:0069742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1023, pseudogene","termid":"PBO:0069742"}


id: PBO:0077764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 divergent transcript","termid":"PBO:0077764"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: FYPO:0006698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-phosphoribosyl diphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular 5-phosphoribosyl diphosphate level","synonyms":[{"name":"decreased 5-phosphoribosyl diphosphate accumulation","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular 5-phosphoribosyl diphosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular PRPP level","type":"exact"},{"name":"reduced cellular 5-phosphoribosyl diphosphate level","type":"exact"}],"termid":"FYPO:0006698"}


id: GO:0032382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sterol transport","termid":"GO:0032373"},{"relation_name":"is_a","term_name":"positive regulation of intracellular lipid transport","termid":"GO:0032379"},{"relation_name":"is_a","term_name":"regulation of intracellular sterol transport","termid":"GO:0032380"},{"relation_name":"positively_regulates","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intracellular sterol transport","synonyms":[{"name":"activation of intracellular sterol transport","type":"narrow"},{"name":"stimulation of intracellular sterol transport","type":"narrow"},{"name":"up regulation of intracellular sterol transport","type":"exact"},{"name":"up-regulation of intracellular sterol transport","type":"exact"},{"name":"upregulation of intracellular sterol transport","type":"exact"}],"termid":"GO:0032382"}


id: PR:O13666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg32 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(7)-sterol 5(6)-desaturase erg32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.03c","synonyms":[{"name":"C-5 sterol desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg32","type":"exact"},{"name":"ergosterol Delta(5,6) desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sterol-C5-desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13666"}


id: PBO:0066735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 32","termid":"PBO:0066735"}


id: PBO:0049120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR107 adjacent cis regulating lncRNA","termid":"PBO:0049120"}


id: PBO:0065697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 2","termid":"PBO:0065697"}


id: FYPO:0004856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,6-beta-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal endo-1,6-beta-glucosidase activity","synonyms":[{"name":"abnormal glucan endo-1,6-beta-glucosidase activity","type":"exact"}],"termid":"FYPO:0004856"}


id: PBO:0077148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase like 1","termid":"PBO:0077148"}


id: FYPO:0007364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyruvate kinase activity","termid":"FYPO:0007363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000707"],"is_obsolete":false,"name":"increased pyruvate kinase activity","termid":"FYPO:0007364"}


id: PBO:0091415
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ELO2","termid":"PBO:0091415"}


id: MOD:00826
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and an L-cysteine residue by a thioester bond to form S-(L-threonyl)-L-cysteine.","definition_xrefs":["PubMed:15268951","RESID:AA0415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-threonyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S,3R)-2-amino-3-hydroxybutanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Threonyl cysteine thioester (Cys-Thr)","type":"exact"},{"name":"S-(2-amino-3-hydroxybutanoyl)cysteine","type":"exact"},{"name":"S-(L-threonyl)-L-cysteine","type":"exact"},{"name":"XLNK1ThrSCys","type":"exact"},{"name":"threonine cysteine thioester","type":"exact"}],"termid":"MOD:00826"}


id: GO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of one or more iodine atoms to an amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein iodination (obsolete GO:0018077)","synonyms":[{"name":"protein amino acid iodination","type":"exact"}],"termid":"GO:0018077"}


id: GO:1903352
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of L-ornithine across a membrane.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903352","terms_by_termid":{"GO:1990575":null}}


id: RO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between p and c when p is locomotion process and the outcome of this process is the change of location of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_movement_of","termid":"RO:0002565"}


id: PBO:0083645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongation factor 2 (EF-2), also encoded by EFT1; catalyzes ribosomal translocation during protein synthesis; contains diphthamide, the unique posttranslationally modified histidine residue specifically ADP-ribosylated by diphtheria toxin; EFT2 has a paralog, EFT1, that arose from the whole genome duplication","termid":"PBO:0083645"}


id: GO:0023026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC class II protein complex binding","termid":"GO:0023026"}


id: PATO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000590 relative thickness value (obsolete PATO:0000590)","termid":"PATO:0000590"}


id: GO:0060283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of oocyte development","termid":"GO:0060281"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oocyte development","termid":"GO:0060283"}


id: PBO:0090544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER uridine diphosphate-glucose transmembrane transporter Hut1","termid":"PBO:0090544"}


id: PBO:0065564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 4","termid":"PBO:0065564"}


id: GO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP1 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"EP1 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP1 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP1 receptor binding","type":"exact"}],"termid":"GO:0031864"}


id: PBO:0066175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB transcriptional corepressor like 1","termid":"PBO:0066175"}


id: GO:0000470
data:
  {"annotated_genes":["SJAG_00949","SJAG_04669","SJAG_00689","SJAG_03789","SJAG_05190","SJAG_03012","SJAG_02830","SJAG_02374","SJAG_00882","SJAG_02952","SJAG_04492","SJAG_02417","SJAG_01581","SJAG_01811","SJAG_04330","SJAG_04108","SJAG_04289","SJAG_05223","SJAG_00537","SJAG_00722","SJAG_02275","SJAG_00749","SJAG_00752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88850,88942,103874,109622,112173,114888],"is_not":false,"summary":null,"term":"GO:0000470"},{"annotations":[91002,114551,87739,100127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[111777,85906,101998,106813,94018,110849,96758,113646,113667,85693,88431,93985,111778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000463"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"part_of","term_name":"ribosomal large subunit biogenesis","termid":"GO:0042273"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00537":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00749":null,"SJAG_00752":null,"SJAG_00882":null,"SJAG_00949":null,"SJAG_01581":null,"SJAG_01811":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02417":null,"SJAG_02830":null,"SJAG_02952":null,"SJAG_03012":null,"SJAG_03789":null,"SJAG_04108":null,"SJAG_04289":null,"SJAG_04330":null,"SJAG_04492":null,"SJAG_04669":null,"SJAG_05190":null,"SJAG_05223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000470","terms_by_termid":{"GO:0000448":null,"GO:0000463":null,"GO:0000470":null}}


id: PBO:0028489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_index","termid":"PBO:0028489"}


id: PBO:0058259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4637","termid":"PBO:0058259"}


id: GO:1904281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GOC:TermGenie","PMID:24726328","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase V","synonyms":[{"name":"activation of transcription from RNA pol V promoter","type":"narrow"},{"name":"activation of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"upregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904281"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["PMID:17204561","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: GO:0071938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement any form of vitamin A into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Vitamin A is any of several retinoid derivatives of beta-carotene, primarily retinol, retinal, or retinoic acid.","definition_xrefs":["GOC:mah","PMID:16011460","PMID:1924551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vitamin A transport","synonyms":[{"name":"vitamin A uptake and transport","type":"related"}],"termid":"GO:0071938"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: FYPO:0006233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to vacuolar membrane","termid":"FYPO:0004249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to vacuolar membrane","synonyms":[{"name":"decreased protein localisation to vacuolar membrane","type":"exact"},{"name":"decreased protein localization in vacuolar membrane","type":"exact"},{"name":"decreased protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"decreased protein localization to vacuole membrane","type":"exact"},{"name":"reduced protein localization to vacuolar membrane","type":"exact"}],"termid":"FYPO:0006233"}


id: GO:0035090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Retaining the established polarization of a cell along its apical/basal axis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of apical/basal cell polarity","termid":"GO:0035088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of apical/basal cell polarity","termid":"GO:0035090"}


id: PBO:0028129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_trapoxin_A","termid":"PBO:0028129"}


id: GO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"antigen receptor-mediated signaling pathway","synonyms":[{"name":"antigen receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0050851"}


id: PBO:0082359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in endoplasmic reticulum degradation; involved specifically in autophagy of cortical and cytoplasmic ER in response to nitrogen starvation or rapamycin treatment; acts with COPII subunit Sfb3p; localizes to the cortical and cytoplasmic ER; similar to human FAM134B, which is also involved in ER autophagy and is associated with sensory neuropathy","termid":"PBO:0082359"}


id: GO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly stable complex composed of the ATAC complex and the mediator complex (also called TRAP or MED). MECO binds and regulates the transcription of a subset of non-coding RNAs transcribed by RNA polymerase II.","definition_xrefs":["PMID:20508642","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MECO complex","synonyms":[{"name":"meta-coactivator complex","type":"exact"}],"termid":"GO:0002929"}


id: PBO:0055357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2786","termid":"PBO:0055357"}


id: GO:0030941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloroplast targeting sequence, a specific peptide sequence that acts as a signal to localize the protein within the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0005048","GO:0003674"],"is_obsolete":false,"name":"chloroplast targeting sequence binding","termid":"GO:0030941"}


id: FYPO:0007709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of a non-growing cell tip is decreased.","definition_xrefs":["PMID:23093943","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of non-growing cell tip","synonyms":[{"name":"decreased protein localisation to cell cortex of non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of new non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell end","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to non-growing cell tip cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of non-growing cell tip","type":"exact"}],"termid":"FYPO:0007709"}


id: GO:0075249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aeciospore formation, a process in which a dikaryotic spore of typically a rust fungus is produced in an aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of aeciospore formation","termid":"GO:0075248"},{"relation_name":"positively_regulates","term_name":"aeciospore formation","termid":"GO:0075247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aeciospore formation","termid":"GO:0075249"}


id: PBO:0081739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 670","termid":"PBO:0081739"}


id: PBO:0083475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SKP1","termid":"PBO:0083475"}


id: GO:0043603
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  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chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amide metabolism","type":"exact"},{"name":"cellular amide metabolic process","type":"exact"}],"termid":"GO:0043603","terms_by_termid":{"GO:0000050":null,"GO:0000256":null,"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0006672":null,"GO:0006749":null,"GO:0006750":null,"GO:0006751":null,"GO:0006769":null,"GO:0009102":null,"GO:0015940":null,"GO:0019287":null,"GO:0019427":null,"GO:0019627":null,"GO:0031169":null,"GO:0035336":null,"GO:0035338":null,"GO:0043419":null,"GO:0043456":null,"GO:0046513":null,"GO:0046655":null,"GO:0046656":null,"GO:0046938":null,"GO:0070981":null,"GO:0090423":null,"GO:1905569":null,"GO:1905857":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:2001133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methanethiol.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0006790"],"is_obsolete":false,"name":"methane biosynthetic process from methanethiol","termid":"GO:2001133"}


id: GO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H+ = 2-methylpropanamine + CO2.","definition_xrefs":["EC:4.1.1.14","RHEA:18989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"valine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01437","MetaCyc:VALINE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r1052"],"synonyms":[{"name":"L-valine carboxy-lyase (2-methylpropanamine-forming)","type":"related"},{"name":"L-valine carboxy-lyase activity","type":"related"},{"name":"leucine decarboxylase activity","type":"related"}],"termid":"GO:0050390"}


id: PBO:0062652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 2","termid":"PBO:0062652"}


id: PBO:0036548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Bmt5 (predicted)","termid":"PBO:0036548"}


id: FYPO:0000681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that has abnormal morphology and contains two diploid spores.","definition_xrefs":["PMID:11156975","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of two-spore ascus","synonyms":[{"name":"abnormal ascospore formation resulting in formation of two-spore ascus","type":"exact"},{"name":"abnormal sporulation resulting in formation of two-spore asci","type":"exact"}],"termid":"FYPO:0000681"}


id: PATO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000789 respiratory function value (obsolete PATO:0000789)","termid":"PATO:0000789"}


id: FYPO:0002744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid transport RNAs are transcribed from genes whose products are involved in amino acid transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of amino acid transport gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002744"}


id: GO:0008704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate.","definition_xrefs":["EC:5.3.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconate delta-isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0366","RHEA:18813","GO:0018843","MetaCyc:5.3.3.10-RXN"],"synonyms":[{"name":"2-hydroxyhepta-2,4-diene-1,7-dioate isomerase","type":"related"},{"name":"5-carboxymethyl-2-hydroxymuconate D-isomerase activity","type":"exact"},{"name":"5-carboxymethyl-2-hydroxymuconate delta2,Delta4-2-oxo,Delta3-isomerase activity","type":"related"},{"name":"5-carboxymethyl-2-hydroxymuconic acid isomerase activity","type":"related"},{"name":"CHM isomerase activity","type":"related"},{"name":"HHDD isomerase activity","type":"exact"},{"name":"hpaG-1","type":"related"},{"name":"hpaG1","type":"related"}],"termid":"GO:0008704"}


id: GO:0047961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine.","definition_xrefs":["MetaCyc:GLYCINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"glycine N-acyltransferase activity","secondary_identifiers":["RHEA:19869","Reactome:R-HSA-2534040"],"synonyms":[{"name":"acyl-CoA:glycine N-acyltransferase activity","type":"related"},{"name":"glycine acyltransferase activity","type":"related"},{"name":"glycine-N-acylase activity","type":"related"}],"termid":"GO:0047961"}


id: GO:0010809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:dph","PMID:15489511","GOC:kmvs","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0023052","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle priming","termid":"GO:0010809"}


id: GO:1903023
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of an ascospore-type prospore membrane.","definition_xrefs":["GOC:TermGenie","PMID:11405625","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore-type prospore membrane formation","termid":"GO:0032120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore-type prospore membrane formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of FSM assembly","type":"exact"},{"name":"regulation of FSM biosynthesis","type":"exact"},{"name":"regulation of FSM formation","type":"exact"},{"name":"regulation of ascospore-type prospore membrane assembly","type":"related"},{"name":"regulation of forespore membrane biosynthesis","type":"exact"},{"name":"regulation of forespore membrane formation","type":"exact"}],"termid":"GO:1903023","terms_by_termid":{"GO:1903024":null}}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: PBO:0070121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 35 pseudogene","termid":"PBO:0070121"}


id: GO:0005193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete major urinary protein (obsolete GO:0005193)","synonyms":[{"name":"major urinary protein","type":"exact"}],"termid":"GO:0005193"}


id: GO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate embryonic development","termid":"GO:0043009"}


id: GO:0051740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene binding","termid":"GO:0072328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ethylene binding","synonyms":[{"name":"ethene binding","type":"exact"}],"termid":"GO:0051740"}


id: GO:0044143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of development of symbiont on or near host surface (obsolete GO:0044143)","termid":"GO:0044143"}


id: MOD:01733
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01733"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN","Reactome:R-HSA-5696415"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: GO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lipopolysaccharide + UDP-N-acetylmannosaminouronate = N-acetyl-beta-D-mannosaminouronosyl-1,4-lipopolysaccharide + UDP.","definition_xrefs":["RHEA:28366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"},{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide N-acetylmannosaminouronosyltransferase activity","secondary_identifiers":["MetaCyc:UDPMANACATRANS-RXN","EC:2.4.1.180"],"synonyms":[{"name":"LPS N-acetylmannosaminouronosyltransferase activity","type":"exact"},{"name":"ManNAcA transferase activity","type":"related"},{"name":"UDP-N-acetyl-beta-D-mannosaminouronate:lipopolysaccharide N-acetyl-beta-D-mannosaminouronosyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylmannosaminuronate-acetylglucosaminylpyrophosphorylundecaprenol acetylmannosaminuronosyltransferase activity","type":"related"}],"termid":"GO:0047241"}


id: PBO:0091242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter","termid":"PBO:0091242"}


id: PBO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1E1-BLOC1S5 readthrough (NMD candidate)","termid":"PBO:0045886"}


id: GO:0102027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-demethylmenaquinol-8 + S-adenosyl-L-methionine = menaquinol-8 + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity (obsolete GO:0102027)","termid":"GO:0102027"}


id: GO:1905938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of germ cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15342467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"positively_regulates","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of germ cell proliferation","synonyms":[{"name":"activation of germ cell proliferation","type":"narrow"},{"name":"up regulation of germ cell proliferation","type":"exact"},{"name":"up-regulation of germ cell proliferation","type":"exact"},{"name":"upregulation of germ cell proliferation","type":"exact"}],"termid":"GO:1905938"}


id: PATO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's containing acid (hydrogen ions).","definition_xrefs":["biology-online:biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidity","synonyms":[{"name":"pH","type":"exact"}],"termid":"PATO:0001842"}


id: FYPO:0000127
data:
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id: GO:0043936
data:
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id: PBO:0079300
data:
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id: FYPO:0001496
data:
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id: PBO:0086302
data:
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id: GO:0000819
data:
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id: PBO:0046434
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id: SO:1001244
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id: MOD:00077
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to asymmetric dimethylarginine, N(omega),N(omega)-dimethyl-L-arginine.","definition_xrefs":["PubMed:3032834","PubMed:14570711","PubMed:15835918","PubMed:12964758","PubMed:11152131","RESID:AA0068","ChEBI:17929","Unimod:36#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"dimethylated L-arginine","termid":"MOD:00783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"asymmetric dimethyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-([(dimethylamino)(imino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES Asymmetric dimethylarginine","type":"exact"},{"name":"MOD_RES Omega-N-methylated arginine","type":"exact"},{"name":"N5-[(dimethylamino)(imino)methyl]ornithine","type":"exact"},{"name":"NG,NG-dimethylarginine","type":"exact"},{"name":"NoNoMe2Arg","type":"exact"},{"name":"asymmetric dimethylarginine","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"omega-N,omega-N-dimethlyated L-arginine","type":"exact"},{"name":"omega-N,omega-N-dimethyl-L-arginine","type":"exact"}],"termid":"MOD:00077"}


id: PBO:0051068
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id: PBO:0046663
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id: FYPO:0006803
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id: PR:Q9UT23
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id: PBO:0049391
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 4","termid":"PBO:0049391"}


id: FYPO:0002084
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id: GO:0030574
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id: PATO:0000553
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000553 relative temperature sensitivity value (obsolete PATO:0000553)","termid":"PATO:0000553"}


id: PBO:0043152
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id: GO:0031994
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id: GO:0047950
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id: PR:O75011
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CaM kinase-like vesicle-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase nak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17F3.02","secondary_identifiers":["UniProtKB:O75011"],"synonyms":[{"name":"N-rich kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CAMKV","type":"exact"}],"termid":"PR:O75011"}


id: GO:1903552
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id: PBO:0067731
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id: GO:0002297
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id: GO:0098827
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id: PBO:0050699
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id: PBO:0091547
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id: PR:O74949
data:
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id: PBO:0077161
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id: PBO:0046829
data:
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id: GO:0048502
data:
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id: PBO:0055658
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id: PBO:0087205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent lysine methyltransferase; involved in the trimethylation of eEF1A (Tef1p/Tef2p) at lysine 79; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; required for replication of Brome mosaic virus in budding yeast; expresses a circular RNA; originally misclassified as a N-6-adenine specific DNA methyltransferase based on sequence similarity; both Efm5p and human ortholog N6AMT2 can methylate eEF1a from either species in vitro","termid":"PBO:0087205"}


id: PBO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like domain multiple 8","termid":"PBO:0045952"}


id: GO:0010073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the identity, size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem maintenance","termid":"GO:0010073"}


id: PBO:0045249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C28","termid":"PBO:0045249"}


id: GO:0062055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A regulation of the phtosynthetic light reaction in which the light harvesting antenna complexes transition between photosystems.","definition_xrefs":["PMID:29967049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthetic state transition","termid":"GO:0062055"}


id: FYPO:0000419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of cytokinesis","synonyms":[{"name":"cytokinesis: decreased rate","type":"related"},{"name":"decreased rate of cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinesis","type":"exact"},{"name":"reduced rate of cytokinesis","type":"exact"}],"termid":"FYPO:0000419"}


id: GO:0019597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-mandelate into other compounds, including benzoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"},{"relation_name":"is_a","term_name":"mandelate catabolic process","termid":"GO:0019596"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"(R)-mandelate catabolic process to benzoate","synonyms":[{"name":"(R)-mandelate breakdown to benzoate","type":"exact"},{"name":"(R)-mandelate degradation to benzoate","type":"exact"}],"termid":"GO:0019597"}


id: PATO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mating type that indicates whether the F plasmid has integrated into the chromosome.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial mating type","termid":"PATO:0001335"}


id: PBO:0059350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S15 pseudogene 1","termid":"PBO:0059350"}


id: PBO:0087352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein","termid":"PBO:0087352"}


id: PBO:0027684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_curved,_elongated_cell","termid":"PBO:0027684"}


id: PBO:0031619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transposition","termid":"PBO:0031619"}


id: PATO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A growth quality of a process inhering in an organism, structure, or group of organisms by virtue of the bearer's reduced or increased growth.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth quality of occurrent","termid":"PATO:0001433"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochronic growth","termid":"PATO:0001490"}


id: GO:0036491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","PMID:16835242","GOC:PARL","PMID:14676213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036491"}


id: PBO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member A","termid":"PBO:0047079"}


id: PBO:0073097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 1","termid":"PBO:0073097"}


id: FYPO:0000351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the fungal-type cell wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall during vegetative growth","termid":"FYPO:0000027"},{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002946","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell wall morphology during vegetative growth","synonyms":[{"name":"abnormal cell wall morphology during mitotic cell cycle","type":"related"},{"name":"cell wall morphology: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000351"}


id: PBO:0036518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex subunit, peloto ortholog Dom34 (predicted)","termid":"PBO:0036518"}


id: GO:0061453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an interstitial cell of Cajal. An interstitial cell of Cajal is an intestinal neuroepithelial cell that serves as a pacemaker to trigger gut contraction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"},{"relation_name":"is_a","term_name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"interstitial cell of Cajal differentiation","synonyms":[{"name":"ICC differentiation","type":"related"}],"termid":"GO:0061453"}


id: PBO:0074066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 41","termid":"PBO:0074066"}


id: PBO:0036422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex complex subunit Mmm1-related protein","termid":"PBO:0036422"}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: PBO:0066697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 1 homolog","termid":"PBO:0066697"}


id: PR:O94353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apq12 gene.","definition_xrefs":["UniProtKB:O94353","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein apq12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.04","synonyms":[{"name":"Spom972h-apq12","type":"exact"}],"termid":"PR:O94353"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: PBO:0053847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1116","termid":"PBO:0053847"}


id: PBO:0064070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 104","termid":"PBO:0064070"}


id: GO:1902174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie","PMID:18938133","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte apoptotic process","termid":"GO:1902172"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell apoptotic process","termid":"GO:1904037"},{"relation_name":"positively_regulates","term_name":"keratinocyte apoptotic process","termid":"GO:0097283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte apoptotic process","synonyms":[{"name":"activation of keratinocyte apoptosis","type":"narrow"},{"name":"activation of keratinocyte apoptotic process","type":"narrow"},{"name":"positive regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up regulation of keratinocyte apoptotic process","type":"exact"},{"name":"up-regulation of keratinocyte apoptosis","type":"narrow"},{"name":"up-regulation of keratinocyte apoptotic process","type":"exact"},{"name":"upregulation of keratinocyte apoptosis","type":"narrow"},{"name":"upregulation of keratinocyte apoptotic process","type":"exact"}],"termid":"GO:1902174"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: GO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is double stranded RNA (dsRNA). Genomic dsRNA is first transcribed into single-stranded (ss) mRNA, which is then replicated to ds-genomic RNA.","definition_xrefs":["VZ:1936","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double stranded viral RNA replication","termid":"GO:0039691"}


id: GO:2000485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamine transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"glutamine transport","termid":"GO:0006868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of glutamine transport","synonyms":[{"name":"regulation of L-glutamine transport","type":"related"}],"termid":"GO:2000485"}


id: GO:2000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase III promoter that is involved in smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation (obsolete GO:2000745)","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"positive regulation of transcription from Pol III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from Pol III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter involved in smooth muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"related"},{"name":"stimulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of nonstriated muscle cell differentiation","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter of smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000745"}


id: FYPO:0001053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis at the same size as wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000257","FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0001312","FYPO:0000641","FYPO:0000004"],"is_obsolete":false,"name":"cut, normal size cell","synonyms":[{"name":"cut following normal onset of mitosis, normal size cell","type":"exact"},{"name":"cut with mitotic catastrophe, normal size cell","type":"related"},{"name":"cut, normal size cell during mitotic cell cycle","type":"related"},{"name":"cut, normal size cell during vegetative growth","type":"exact"},{"name":"septation following abnormal nuclear division, normal size cell","type":"exact"}],"termid":"FYPO:0001053"}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: PR:000050398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has not been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, PR:000026291.","definition_xrefs":["PMID:23333317","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/UnPhos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/UnPhos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, PR:000026291","type":"narrow"},{"name":"cut12/UnPhos(T75,T78)","type":"exact"}],"termid":"PR:000050398"}


id: PBO:0028977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nitrite","termid":"PBO:0028977"}


id: GO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to antigenic stimulus","synonyms":[{"name":"down regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002862"}


id: PR:Q9C0X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.19","synonyms":[{"name":"Spom972h-SPBC16E9.19","type":"exact"}],"termid":"PR:Q9C0X2"}


id: GO:0047494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + CDP-ethanolamine = L-serine-phosphoethanolamine + CMP + H+.","definition_xrefs":["EC:2.7.8.4","RHEA:22656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"serine-phosphoethanolamine synthase activity","secondary_identifiers":["KEGG_REACTION:R02563","MetaCyc:SERINE-PHOSPHOETHANOLAMINE-SYNTHASE-RXN"],"synonyms":[{"name":"CDP-ethanolamine:L-serine ethanolamine phosphotransferase activity","type":"related"},{"name":"serine ethanolamine phosphate synthetase activity","type":"related"},{"name":"serine ethanolamine phosphodiester synthase activity","type":"related"},{"name":"serine ethanolaminephosphotransferase activity","type":"related"},{"name":"serine-phosphinico-ethanolamine synthase activity","type":"related"},{"name":"serinephosphoethanolamine synthase activity","type":"related"}],"termid":"GO:0047494"}


id: PBO:0069737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1018, pseudogene","termid":"PBO:0069737"}


id: MOD:01724
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01724"}


id: FYPO:0003754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000120"],"is_obsolete":false,"name":"multiple mitotic spindles","synonyms":[{"name":"additional mitotic spindles present during vegetative growth","type":"exact"},{"name":"extra mitotic spindles during vegetative growth","type":"exact"},{"name":"increased number of mitotic spindles","type":"exact"},{"name":"mitotic spindles present in greater numbers during vegetative growth","type":"exact"},{"name":"multiple spindles during mitosis","type":"exact"},{"name":"multiple spindles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003754"}


id: PBO:0030043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_iron","termid":"PBO:0030043"}


id: PBO:0054419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1815","termid":"PBO:0054419"}


id: GO:1900059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7891681","GOC:TermGenie","PMID:7601277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of sulfate assimilation","termid":"GO:1900058"},{"relation_name":"positively_regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfate assimilation","synonyms":[{"name":"activation of sulfate assimilation","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"activation of sulphate assimilation","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulphate assimilation","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulfate assimilation","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulphate assimilation","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulfate assimilation","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulphate assimilation","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulfate assimilation","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulphate assimilation","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900059"}


id: GO:0010215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellulose microfibril, any of the cellulose structures laid down in orthogonal layers in a plant cell wall.","definition_xrefs":["PMID:12468730","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"},{"relation_name":"part_of","term_name":"plant-type cell wall assembly","termid":"GO:0071668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellulose microfibril organization","synonyms":[{"name":"cellulose microfibril organisation","type":"exact"}],"termid":"GO:0010215"}


id: PBO:0005458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent glutamate dehydrogenase Gdh2 (predicted)","termid":"PBO:0005458"}


id: GO:0160023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex process that expels air forcibly from the mouth and nose in an explosive, spasmodic involuntary action resulting chiefly from irritation of the nasal mucous membrane.","definition_xrefs":["PMID:34133943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sneeze reflex","synonyms":[{"name":"sternutation","type":"exact"}],"termid":"GO:0160023"}


id: GO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed cell death","secondary_identifiers":["GO:0043070"],"synonyms":[{"name":"regulation of non-apoptotic programmed cell death","type":"narrow"}],"termid":"GO:0043067"}


id: PBO:0062086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 17 pseudogene","termid":"PBO:0062086"}


id: PBO:0056419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1","termid":"PBO:0056419"}


id: PR:Q9UTL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 710 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor IIIA (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.09c","secondary_identifiers":["UniProtKB:Q9UTL5"],"synonyms":[{"name":"Spom972h-ZNF710","type":"exact"},{"name":"TFIIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL5"}


id: PBO:0017570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase (predicted)","termid":"PBO:0017570"}


id: PBO:0080649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD and tetratricopeptide repeats 1","termid":"PBO:0080649"}


id: PBO:0062916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 7","termid":"PBO:0062916"}


id: PBO:0088409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak1","termid":"PBO:0088409"}


id: GO:0034470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.","definition_xrefs":["PMID:27573892","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA processing (obsolete GO:0034470)","termid":"GO:0034470"}


id: GO:1903481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actin filament organization involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly (obsolete GO:1903481)","synonyms":[{"name":"down regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"down-regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"down-regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"downregulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"downregulation of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"inhibition of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"narrow"},{"name":"inhibition of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"inhibition of actin filament organization involved in mitotic actomyosin contractile ring assembly","type":"narrow"},{"name":"negative regulation of actin filament organisation involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"negative regulation of actin filament organisation involved in mitotic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903481"}


id: GO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of its symbiont's transcription.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of symbiont transcription","termid":"GO:0052472"}


id: GO:0021903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is divided into specific regions along the rostrocaudal axis.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:jid","PMID:11262869","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rostrocaudal neural tube patterning","synonyms":[{"name":"anterior-posterior neural tube patterning","type":"related"}],"termid":"GO:0021903"}


id: PBO:0047261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member D","termid":"PBO:0047261"}


id: PATO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated purple","synonyms":[{"name":"pale purple","type":"exact"}],"termid":"PATO:0001282"}


id: GO:0033924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in dextrans, to remove successive isomaltotriose units from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dextran 1,6-alpha-isomaltotriosidase activity","secondary_identifiers":["MetaCyc:3.2.1.95-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan isomaltotriohydrolase activity","type":"related"},{"name":"exo-isomaltotriohydrolase activity","type":"related"}],"termid":"GO:0033924"}


id: PBO:0031236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_formation","termid":"PBO:0031236"}


id: GO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an oocyte cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte fate determination","synonyms":[{"name":"oocyte cell fate determination","type":"exact"}],"termid":"GO:0030716"}


id: GO:1900129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G-protein activated inward rectifier potassium channel activity","termid":"GO:1900128"},{"relation_name":"is_a","term_name":"positive regulation of inward rectifier potassium channel activity","termid":"GO:1901980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of G-protein activated inward rectifier potassium channel activity","synonyms":[{"name":"activation of G protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900129"}


id: PBO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39 (predicted)","termid":"PBO:0001640"}


id: GO:1901122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bacitracin A.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacitracin A metabolic process","synonyms":[{"name":"bacitracin A metabolism","type":"exact"}],"termid":"GO:1901122"}


id: GO:0052134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near host (obsolete GO:0052134)","termid":"GO:0052134"}


id: PBO:0091249
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-One, Three-Galactosyltransferase","termid":"PBO:0091249"}


id: GO:1901559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ribavirin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ribavirin","termid":"GO:1901559"}


id: PBO:0064283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing N1","termid":"PBO:0064283"}


id: FYPO:0003584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is increased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["GO:0006303","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"increased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"increased NHEJ","type":"exact"},{"name":"increased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"increased nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003584"}


id: PBO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A lysine methyltransferase 3","termid":"PBO:0045864"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: PBO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ro60, Y RNA binding protein","termid":"PBO:0070373"}


id: GO:0048035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"heme O metabolic process","termid":"GO:0048033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme O catabolic process","synonyms":[{"name":"haem O catabolic process","type":"exact"},{"name":"haem O catabolism","type":"exact"},{"name":"heme O breakdown","type":"exact"},{"name":"heme O catabolism","type":"exact"},{"name":"heme O degradation","type":"exact"}],"termid":"GO:0048035"}


id: GO:0003339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephros.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003339"}


id: PBO:0052045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 1 pseudogene 1","termid":"PBO:0052045"}


id: GO:0010583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["PMID:18334669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cyclopentenone","termid":"GO:0010583"}


id: PBO:0015263
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with noncoding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015263"}


id: GO:2000161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in cardiac right atrium morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in cardiac right atrium morphogenesis (obsolete GO:2000161)","termid":"GO:2000161"}


id: PBO:0083730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential alpha-kleisin subunit of the cohesin complex; required for sister chromatid cohesion in mitosis; subject to proteolytic cleavage by separase Esp1p, resulting in dissociation of cohesin from chromatin and the separation of sister chromatids at the mitotic metaphase-to-anaphase transition; apoptosis induces cleavage and translocation of a C-terminal fragment to mitochondria; expression peaks in S phase","termid":"PBO:0083730"}


id: GO:0090223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from chromatin.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0065003","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"chromatin-templated microtubule nucleation","termid":"GO:0090223"}


id: GO:0030038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"contractile actin filament bundle assembly","termid":"GO:0030038"}


id: PBO:0088458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guard protein for 5'-capping of pre-mRNAs Srp2/Npl3","termid":"PBO:0088458"}


id: GO:0006469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of protein kinase activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"negative regulation of kinase activity","termid":"GO:0033673"},{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein kinase activity","synonyms":[{"name":"down regulation of protein kinase activity","type":"exact"},{"name":"down-regulation of protein kinase activity","type":"exact"},{"name":"downregulation of protein kinase activity","type":"exact"},{"name":"inhibition of protein kinase activity","type":"narrow"}],"termid":"GO:0006469"}


id: PBO:0063217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 7","termid":"PBO:0063217"}


id: PBO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_formation","termid":"PBO:0031643"}


id: PBO:0082476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; role in nutrient-stimulated growth via Ras-cAMP signaling; inhibited by regulatory subunit Bcy1p in cAMPs absence; phosphorylates and inhibits Whi3p to promote G1/S phase passage; phosphorylates Nej1p to regulate nonhomologous end joining (NHEJ); impairs mitochondrial import of pre-Tom40p via phosphorylation under non-respiratory conditions; partially redundant with Tpk2p and Tpk3p; human homolog PRKACB regulates NHEJ via NHEJ1 phosphorylation","termid":"PBO:0082476"}


id: GO:1990610
data:
  {"annotated_genes":["SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99310],"is_not":false,"summary":null,"term":"GO:1990610"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of acetolactate synthase.","definition_xrefs":["PMID:8972574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"acetolactate synthase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990610","terms_by_termid":{"GO:1990610":null}}


id: PBO:0082797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B","termid":"PBO:0082797"}


id: FYPO:0002862
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}],"single_locus_phenotype":[{"annotations":[115433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004105"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00514":null,"SJAG_04522":null},"genotype_count":2,"genotypes_by_uniquename":{"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028"],"name":"abnormal cell growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_00514"],"single_locus_genotype_uniquenames":["scd1delta"],"termid":"FYPO:0002862","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004105":null,"FYPO_EXT:0000001":null}}


id: PBO:0034666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle","termid":"PBO:0034666"}


id: PBO:0048802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 2","termid":"PBO:0048802"}


id: PR:Q9P6K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30C2.03 gene.","definition_xrefs":["UniProtKB:Q9P6K8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30C2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30C2.03","synonyms":[{"name":"Spom972h-SPAC30C2.03","type":"exact"}],"termid":"PR:Q9P6K8"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: PBO:0043548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type II alpha 1 chain","termid":"PBO:0043548"}


id: PBO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.10","termid":"PBO:0004485"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","CL:0000737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: FYPO:0006452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a histone H3 acetyltransferase activity is lower than normal. Processivity refers to the number of methylation reactions catalyzed (methyl residues added) per histone binding event.","definition_xrefs":["PMID:26401015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000641","FYPO:0000654"],"is_obsolete":false,"name":"decreased histone H3 acetyltransferase processivity","synonyms":[{"name":"decreased H3 histone acetyltransferase processivity","type":"exact"},{"name":"reduced histone H3 acetyltransferase processivity","type":"exact"}],"termid":"FYPO:0006452"}


id: FYPO:0006798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the nuclear MIS12/MIND complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah","PMID:29180432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal nuclear MIS12/MIND complex binding","synonyms":[{"name":"normal nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"normal nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"}],"termid":"FYPO:0006798"}


id: GO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont defense response (obsolete GO:0052196)","synonyms":[{"name":"down regulation by host of symbiont defense response","type":"exact"},{"name":"down-regulation by host of symbiont defense response","type":"exact"},{"name":"downregulation by host of symbiont defense response","type":"exact"},{"name":"inhibition by host of symbiont defense response","type":"narrow"}],"termid":"GO:0052196"}


id: GO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to thrombospondin.","definition_xrefs":["PMID:11358957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha3-beta1 integrin-thrombospondin complex","synonyms":[{"name":"ITGA3-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071095"}


id: GO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003039"}


id: PBO:0085879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; inhibits haploid invasive growth when overexpressed; synthetically lethal with phospholipase C (PLC1); expression induced by mild heat-stress on a non-fermentable carbon source, upon entry into stationary phase and upon nitrogen deprivation; repressed by inosine and choline in an Opi1p-dependent manner; highly conserved from bacteria to human; Memo, the human homolog, is an ErbB2 interacting protein with an essential function in cell motility","termid":"PBO:0085879"}


id: PBO:0036508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP II adaptor Erv29 (predicted)","termid":"PBO:0036508"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: GO:0001786
data:
  {"annotated_genes":["SJAG_02572","SJAG_04077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84070,98448],"is_not":false,"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732","PMID:12000961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02572":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylserine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001786","terms_by_termid":{"GO:0001786":null}}


id: PBO:0064614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 4","termid":"PBO:0064614"}


id: PBO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 2","termid":"PBO:0048053"}


id: GO:0060577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the pulmonary venous blood vessels are generated and organized. Pulmonary veins are blood vessels that transport blood from the lungs to the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary vein morphogenesis","synonyms":[{"name":"pulmonary venous blood vessel morphogenesis","type":"related"}],"termid":"GO:0060577"}


id: PBO:0053443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 390","termid":"PBO:0053443"}


id: PBO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear mitotic apparatus protein 1","termid":"PBO:0061657"}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"gene_count":0,"genotype_count":0,"name":"obsolete isoproturon dimethylaminedehydrogenase activity (obsolete GO:0034568)","termid":"GO:0034568"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04369","PANTHER:PTHR13889:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: PBO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transporter Vrg4 (predicted)","termid":"PBO:0002635"}


id: GO:0004127
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111577],"is_not":false,"summary":null,"term":"GO:0004127"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP.","definition_xrefs":["EC:2.7.4.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"(d)CMP kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.4.14"],"synonyms":[{"name":"ATP:CMP phosphotransferase activity","type":"related"},{"name":"CMP kinase activity","type":"narrow"},{"name":"CTP:CMP phosphotransferase activity","type":"related"},{"name":"cytidine monophosphate kinase activity","type":"related"},{"name":"dCMP kinase activity","type":"narrow"},{"name":"deoxycytidine monophosphokinase activity","type":"related"},{"name":"deoxycytidylate kinase activity","type":"broad"}],"termid":"GO:0004127","terms_by_termid":{"GO:0004127":null}}


id: PBO:0077020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theg spermatid protein like","termid":"PBO:0077020"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674","GO:0140096","GO:0004672","GO:0038023"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: FYPO:0004975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending behind a moving spindle pole body occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization behind moving spindle pole body","synonyms":[{"name":"decreased microtubule shrinkage behind moving spindle pole body","type":"related"},{"name":"decreased rate of backward-extending microtubule depolymerization","type":"exact"},{"name":"decreased rate of microtubule catastrophe behind moving spindle pole body","type":"related"},{"name":"decreased rate of microtubule depolymerisation behind moving spindle pole body","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving SPB","type":"exact"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization behind moving spindle pole body during vegetative growth","type":"exact"},{"name":"increased microtubule stability behind moving spindle pole body","type":"related"},{"name":"increased stability of backwards-extending microtubules","type":"related"},{"name":"reduced rate of microtubule depolymerization behind moving spindle pole body","type":"exact"}],"termid":"FYPO:0004975"}


id: PBO:0043677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 2A","termid":"PBO:0043677"}


id: PBO:0027689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_curved,_elongated_cell","termid":"PBO:0027689"}


id: PBO:0090061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein Mug99","termid":"PBO:0090061"}


id: PBO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member B, pseudogene","termid":"PBO:0047158"}


id: GO:0021656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of rhombomere 2. This process pertains to the physical shaping of a rudimentary structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere structural organization","termid":"GO:0021595"},{"relation_name":"part_of","term_name":"rhombomere 2 morphogenesis","termid":"GO:0021655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 2 structural organization","synonyms":[{"name":"rhombomere 2 structural organisation","type":"exact"}],"termid":"GO:0021656"}


id: GO:0048095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-specific pigmentation","termid":"GO:0048071"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female pigmentation","termid":"GO:0048095"}


id: GO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3.","definition_xrefs":["EC:3.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"beta-ureidopropionase activity","secondary_identifiers":["RHEA:11184","Reactome:R-HSA-73591","MetaCyc:BETA-UREIDOPROPIONASE-RXN","Reactome:R-HSA-73620"],"synonyms":[{"name":"N-carbamoyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0003837"}


id: GO:0019856
data:
  {"annotated_genes":["SJAG_00964","SJAG_00444","SJAG_05024","SJAG_03164","SJAG_00694","SJAG_00779","SJAG_00392","SJAG_04354","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85518],"is_not":false,"summary":null,"term":"GO:0019856"},{"annotations":[94529,83866,107079,107917,111574,112736,89457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[88015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase biosynthetic process","termid":"GO:0046112"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound biosynthetic process","termid":"GO:0072528"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base formation","type":"exact"},{"name":"pyrimidine base synthesis","type":"exact"},{"name":"pyrimidine base anabolism","type":"exact"},{"name":"pyrimidine base biosynthesis","type":"exact"},{"name":"pyrimidine base biosynthetic process","type":"exact"}],"termid":"GO:0019856","terms_by_termid":{"GO:0006207":null,"GO:0006223":null,"GO:0019856":null}}


id: GO:2000783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000782"},{"relation_name":"negatively_regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000783"}


id: PBO:0058615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6747","termid":"PBO:0058615"}


id: GO:0102617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oryzalexin B + NAD(P) = oryzalexin C + H+ + NAD(P)H.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oryzalexin C synthase (oryzalexin B dependent) activity (obsolete GO:0102617)","termid":"GO:0102617"}


id: MOD:01631
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-alanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine removal","termid":"MOD:01631"}


id: GO:0033903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endohydrolysis of 1,3- or 1,4-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-1,3(4)-beta-glucanase activity (obsolete GO:0033903)","synonyms":[{"name":"endo-1,3(4)-beta-glucanase activity","type":"exact"}],"termid":"GO:0033903"}


id: PBO:0015239
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(8)","termid":"PBO:0015239"}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: PBO:0059516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded L-strand promoter","termid":"PBO:0059516"}


id: PBO:0076176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1D member 1 pseudogene 2","termid":"PBO:0076176"}


id: FYPO:0000675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein targeting during vegetative growth","synonyms":[{"name":"abnormal protein targeting during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000675"}


id: GO:0018126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a hydroxy group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein hydroxylation","synonyms":[{"name":"protein amino acid hydroxylation","type":"exact"}],"termid":"GO:0018126"}


id: PBO:0054937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2351","termid":"PBO:0054937"}


id: PBO:0030387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cortex_morphology_during_nitrogen_starvation","termid":"PBO:0030387"}


id: GO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platelet-derived growth factor","termid":"GO:0036119"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platelet-derived growth factor stimulus","synonyms":[{"name":"cellular response to PDGF stimulus","type":"exact"}],"termid":"GO:0036120"}


id: PBO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 6","termid":"PBO:0044120"}


id: _global:has_divisor_entity
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_entity","termid":"_global:has_divisor_entity"}


id: PBO:0055713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and cysteine rich domains 1","termid":"PBO:0055713"}


id: PBO:0090098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Rst2","termid":"PBO:0090098"}


id: GO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of trinitrotoluene, a methylated benzene molecule with three NO2 groups attached to it.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trinitrotoluene biosynthetic process (obsolete GO:0046259)","synonyms":[{"name":"trinitrotoluene anabolism","type":"exact"},{"name":"trinitrotoluene biosynthesis","type":"exact"},{"name":"trinitrotoluene biosynthetic process","type":"exact"},{"name":"trinitrotoluene formation","type":"exact"},{"name":"trinitrotoluene synthesis","type":"exact"}],"termid":"GO:0046259"}


id: PBO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_synthase_(NADH)_activity","termid":"PBO:0034527"}


id: GO:0015406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ABC-type uptake permease activity (obsolete GO:0015406)","synonyms":[{"name":"ABC-type uptake permease activity","type":"exact"}],"termid":"GO:0015406"}


id: GO:0060137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the mother that results in birth.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"parturition","termid":"GO:0007567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal process involved in parturition","termid":"GO:0060137"}


id: GO:0033729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavan-3-ol + 2 NAD(P)+ = an anthocyanidin + 2 NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"anthocyanidin reductase activity","secondary_identifiers":["MetaCyc:RXN-10693"],"synonyms":[{"name":"ANR","type":"related"},{"name":"AtANR","type":"related"},{"name":"MtANR","type":"related"},{"name":"flavan-3-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0033729"}


id: PBO:0076222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene","termid":"PBO:0076222"}


id: FYPO:0002759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pre-autophagosomal structure","synonyms":[{"name":"abolished protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"abolished protein localization to PAS","type":"exact"},{"name":"abolished protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"protein localization to pre-autophagosomal structure abolished","type":"exact"}],"termid":"FYPO:0002759"}


id: PBO:0062903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXR1 antisense RNA 1","termid":"PBO:0062903"}


id: PR:Q9URX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC93-like protein C922.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.05c","synonyms":[{"name":"Spom972h-SPAC922.05c","type":"exact"}],"termid":"PR:Q9URX1"}


id: PBO:0014593
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA Maintenance","termid":"PBO:0014593"}


id: PBO:0074323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ArfGAP 1","termid":"PBO:0074323"}


id: PR:Q9Y7P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.05c gene.","definition_xrefs":["UniProtKB:Q9Y7P9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.05c","synonyms":[{"name":"Spom972h-SPCC191.05c","type":"exact"}],"termid":"PR:Q9Y7P9"}


id: GO:0003417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cartilage that will provide a scaffold for mineralization of endochondral bones as they elongate or grow.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development involved in endochondral bone morphogenesis","termid":"GO:0060351"},{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"endochondral bone growth","termid":"GO:0003416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage development","termid":"GO:0003417"}


id: GO:1902605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a heterotrimeric G-protein complex.","definition_xrefs":["GOC:TermGenie","PMID:23637185","GOC:dph","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"heterotrimeric G-protein complex assembly","synonyms":[{"name":"heterotrimeric G-protein GTPase activity assembly","type":"related"},{"name":"heterotrimeric G-protein GTPase activity formation","type":"related"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit assembly","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit formation","type":"narrow"},{"name":"heterotrimeric G-protein complex formation","type":"exact"}],"termid":"GO:1902605"}


id: GO:1903228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthosine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:7007809","PMID:7559336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"xanthosine catabolic process","synonyms":[{"name":"xanthosine breakdown","type":"exact"},{"name":"xanthosine catabolism","type":"exact"},{"name":"xanthosine degradation","type":"exact"}],"termid":"GO:1903228"}


id: PBO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein","termid":"PBO:0000229"}


id: SO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been predicted using sequence similarity techniques.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supported_by_sequence_similarity","synonyms":[{"name":"supported by sequence similarity","type":"exact"}],"termid":"SO:0000907"}


id: PATO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decussate","synonyms":[{"name":"crosscutting","type":"exact"},{"name":"intercrossing","type":"exact"},{"name":"intersecting","type":"exact"}],"termid":"PATO:0001953"}


id: PBO:0074279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 1","termid":"PBO:0074279"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: MOD:00651
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a palmitoylamino group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-palmitoylated residue","synonyms":[{"name":"N-hexadecanoylated residue","type":"exact"},{"name":"NPamRes","type":"exact"}],"termid":"MOD:00651"}


id: PBO:0046590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 32, envelope","termid":"PBO:0046590"}


id: GO:0032987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a protein-lipid complex into its constituent components.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"},{"relation_name":"is_a","term_name":"protein-lipid complex organization","termid":"GO:0071825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-lipid complex disassembly","termid":"GO:0032987"}


id: PR:O43013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.14","synonyms":[{"name":"Spom972h-csi1","type":"exact"}],"termid":"PR:O43013"}


id: PBO:0036538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase Uro1","termid":"PBO:0036538"}


id: PBO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan glucosidase Exg2, unknown specificity","termid":"PBO:0002595"}


id: FYPO:0004418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, and in which the export of polyadenylated mRNA from the nucleus is decreased. The daughter cells produced by septation are both inviable. Export of all polyadenylated mRNAs or a specific mRNA may be affected.","definition_xrefs":["PomBase:vw","PMID:14511667","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"has_part","term_name":"decreased poly(A)+ mRNA export from nucleus","termid":"FYPO:0002522"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0006551","FYPO:0000631","FYPO:0000004","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"cut cell with decreased poly(A)+ mRNA export from nucleus","synonyms":[{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"cut cell with decreased poly(A)+ mRNA export from nucleus during vegetative growth","type":"exact"},{"name":"cut cell with reduced poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"cut with decreased poly(A)+ mRNA export from nucleus","type":"exact"},{"name":"decreased poly(A) mRNA export in cut","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with decreased poly(A)+ mRNA export from nucleus","type":"exact"}],"termid":"FYPO:0004418"}


id: PBO:0078059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 49","termid":"PBO:0078059"}


id: PBO:0039051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1","termid":"PBO:0039051"}


id: PR:O13846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fatty acid 2-hydroxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01681","PANTHER:PTHR12863:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.08","secondary_identifiers":["UniProtKB:O13846"],"synonyms":[{"name":"Spom972h-FA2H","type":"exact"}],"termid":"PR:O13846"}


id: _global:indirectly_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_causally_upstream_of","secondary_identifiers":["RO:0012011"],"termid":"_global:indirectly_causally_upstream_of"}


id: PBO:0028535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028535"}


id: GO:0061631
data:
  {"annotated_genes":["SJAG_04857","SJAG_01679","SJAG_02918","SJAG_04612","SJAG_05022","SJAG_05340","SJAG_00293","SJAG_00300","SJAG_00855","SJAG_04573","SJAG_00931","SJAG_00208"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83877,84090,84245,87289,97996,98133,98285,102447,104178,108994,110278,112803],"is_not":false,"summary":null,"term":"GO:0061631"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of ubiquitin from one protein to another via the reaction X-ubiquitin + Y = Y-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:BioGRID","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-protein transferase activity","termid":"GO:0004842"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01679":null,"SJAG_02918":null,"SJAG_04573":null,"SJAG_04612":null,"SJAG_04857":null,"SJAG_05022":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0019787","GO:0140096","GO:0003674","GO:0004842","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"ubiquitin conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.2.23"],"synonyms":[{"name":"E2","type":"broad"},{"name":"HECT E3","type":"related"}],"termid":"GO:0061631","terms_by_termid":{"GO:0061631":null}}


id: PBO:0049433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 10","termid":"PBO:0049433"}


id: PBO:0057740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1470","termid":"PBO:0057740"}


id: GO:0009740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin mediated signaling pathway","termid":"GO:0010476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway","synonyms":[{"name":"GA-signaling","type":"exact"},{"name":"gibberellic acid mediated signalling","type":"exact"},{"name":"gibberellic acid signaling","type":"exact"}],"termid":"GO:0009740"}


id: PBO:0074914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 84","termid":"PBO:0074914"}


id: FYPO:0006107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells mate and undergo meiotic nuclear division and sporulation in the presence of nutrients, notably nitrogen and glucose. Normally, fission yeast mate, undergo meiosis, and sporulate only under conditions of nitrogen and carbon starvation.","definition_xrefs":["PomBase:mah","PMID:27613427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"mating, meiosis, and sporulation without starvation","synonyms":[{"name":"conjugation, meiosis, and sporulation without starvation","type":"exact"},{"name":"deregulated sporulation","type":"related"},{"name":"mating, meiotic nuclear division, and sporulation without starvation","type":"exact"},{"name":"meiotic cell cycle in presence of nutrients","type":"exact"},{"name":"meiotic cell cycle without starvation","type":"exact"},{"name":"sporulation in presence of nutrients","type":"related"}],"termid":"FYPO:0006107"}


id: PR:P79015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3202 gene.","definition_xrefs":["UniProtKB:P79015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L32-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.10","synonyms":[{"name":"Spom972h-rpl3202","type":"exact"}],"termid":"PR:P79015"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"},{"relation_name":"is_a","term_name":"deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: PBO:0113235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitrogen-responsive activator of Start; nuclear microprotein with transcriptional activator activity; bypasses Start arrest in a cln3 bck2 double mutant when overexpressed; interacts with subunits of the SBF complex (Swi4p-Swi6p); induced by nitrogen limitation and rapamycin with peak abundance at Start; proposed to promote the G1/S transition by rewiring the G1/S transcriptional machinery under poor nitrogen conditions upstream of the Whi5-inhibited form of SBF and independent of Cln3 and Bck2","termid":"PBO:0113235"}


id: PBO:0051211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-61","termid":"PBO:0051211"}


id: PBO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase, spermatogenic","termid":"PBO:0048367"}


id: GO:0030576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Cajal bodies, nuclear bodies that appear ultrastructurally as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter and are enriched in ribonucleoproteins, and certain general RNA polymerase II transcription factors.","definition_xrefs":["GOC:mah","PMID:11031238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Cajal body organization","synonyms":[{"name":"Cajal body organisation","type":"exact"},{"name":"Cajal body organization and biogenesis","type":"related"}],"termid":"GO:0030576"}


id: PBO:0048283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 17","termid":"PBO:0048283"}


id: PR:000085729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:19362535","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht1/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085729"}


id: PR:Q9UU81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl4 gene.","definition_xrefs":["UniProtKB:Q9UU81","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit gamma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.06","synonyms":[{"name":"Spom972h-apl4","type":"exact"},{"name":"clathrin assembly protein complex 1 gamma-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large gamma-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU81"}


id: GO:0009301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"snRNA metabolic process","termid":"GO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0016073","GO:0008150"],"is_obsolete":false,"name":"snRNA transcription","termid":"GO:0009301"}


id: PBO:0065047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 1","termid":"PBO:0065047"}


id: PBO:0072945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26A","termid":"PBO:0072945"}


id: PBO:0075332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbin and SH3 domain containing 1","termid":"PBO:0075332"}


id: GO:0106153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone in which a residue has been modified by phosphorylation.","definition_xrefs":["PMID:20679485","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone binding","termid":"GO:0042393"},{"relation_name":"is_a","term_name":"phosphorylation-dependent protein binding","termid":"GO:0140031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phosphorylated histone binding","termid":"GO:0106153"}


id: GO:0010336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of an internal steady state of gibberellic acid; may involve transport, biosynthesis, catabolism or conjugation.","definition_xrefs":["PMID:17194763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gibberellic acid homeostasis","synonyms":[{"name":"gibberellin homeostasis","type":"broad"}],"termid":"GO:0010336"}


id: GO:0017093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds within a sterol regulatory element binding protein (SREBP). SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["PMID:12923525","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element-binding protein protease activity (obsolete GO:0017093)","synonyms":[{"name":"SREBP protease activity","type":"exact"},{"name":"sterol regulatory element-binding protein protease activity","type":"exact"}],"termid":"GO:0017093"}


id: PBO:0003748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA guanylyltransferase Ceg1","termid":"PBO:0003748"}


id: PBO:0081534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 444","termid":"PBO:0081534"}


id: FYPO:0002213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and the germinated spores have elongated germ tubes that are curved along the long axis. The population may be mixed with respect to other phenotypes (e.g. whether cell division occurs).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, elongated curved germ tubes (obsolete FYPO:0002213)","synonyms":[{"name":"cell population inviable after spore germination, with elongated, curved germ tubes","type":"exact"},{"name":"inviable germinated spore population, elongated curved germ tubes","type":"exact"}],"termid":"FYPO:0002213"}


id: PBO:0073805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 11","termid":"PBO:0073805"}


id: PBO:0039235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminolevulinate dehydratase","termid":"PBO:0039235"}


id: GO:0006742
data:
  {"annotated_genes":["SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101109],"is_not":false,"summary":null,"term":"GO:0006742"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; catabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"},{"relation_name":"is_a","term_name":"NADP metabolic process","termid":"GO:0006739"},{"relation_name":"is_a","term_name":"pyridine nucleotide catabolic process","termid":"GO:0019364"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"NADP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NADP (oxidized) catabolic process","type":"exact"},{"name":"NADP (oxidized) catabolism","type":"exact"},{"name":"NADP (reduced) catabolic process","type":"exact"},{"name":"NADP (reduced) catabolism","type":"exact"},{"name":"NADP breakdown","type":"exact"},{"name":"NADP catabolism","type":"exact"},{"name":"NADP degradation","type":"exact"},{"name":"NADPH catabolic process","type":"exact"},{"name":"NADPH catabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"oxidized NADP catabolic process","type":"exact"},{"name":"oxidized NADP catabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"},{"name":"reduced NADP catabolic process","type":"exact"},{"name":"reduced NADP catabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate catabolism","type":"exact"}],"termid":"GO:0006742","terms_by_termid":{"GO:0006742":null}}


id: PBO:0077328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 64","termid":"PBO:0077328"}


id: FYPO:0002252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains a single septum, has one nucleus, is elongated, and is inviable. The septum is in an abnormal location, and the nucleus is located in one compartment of the septated cell. The cell compartment containing the nucleus is swollen (i.e. has a larger diameter and volume than the other compartment).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate monoseptate vegetative cell","termid":"FYPO:0001917"},{"relation_name":"is_a","term_name":"inviable swollen mononucleate monoseptate vegetative cell","termid":"FYPO:0002103"},{"relation_name":"is_a","term_name":"normal septum location","termid":"FYPO:0002253"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0000005","FYPO:0000257"],"is_obsolete":false,"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum","synonyms":[{"name":"inviable elongated mononucleate vegetative cell with normally localized septum with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable large elongated mononucleate vegetative cell with normally localized septum","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localised septum","type":"exact"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally localized septum during mitotic cell cycle","type":"related"},{"name":"inviable swollen elongated mononucleate vegetative cell with normally positioned septum","type":"exact"},{"name":"lethal; swollen elongated mononucleate vegetative cell with normally localized septum","type":"exact"},{"name":"long swollen mononucleate cell with normally localized septum","type":"exact"},{"name":"swollen elongated mononucleate cell with normal septum position","type":"narrow"},{"name":"swollen elongated mononucleate cell with normally localized septum near new end during vegetative growth","type":"exact"},{"name":"swollen elongated mononucleate cell with normally placed septum","type":"exact"}],"termid":"FYPO:0002252"}


id: GO:0030691
data:
  {"annotated_genes":["SJAG_01494","SJAG_04346","SJAG_00311"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84011,88050,108438],"is_not":false,"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with 66S preribosomes; predominantly nucleoplasmic, but also locates to the nucleolus; involved in ribosomal large subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"preribosome, large subunit precursor","termid":"GO:0030687"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_01494":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0030684","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Noc2p-Noc3p complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030691","terms_by_termid":{"GO:0030691":null}}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: GO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"regulates","term_name":"eosinophil differentiation","termid":"GO:0030222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil differentiation","termid":"GO:0045643"}


id: PBO:0081492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385D","termid":"PBO:0081492"}


id: PBO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 6","termid":"PBO:0043246"}


id: PBO:0081300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 81","termid":"PBO:0081300"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: PBO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D3","termid":"PBO:0072551"}


id: PBO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Prw1","termid":"PBO:0002847"}


id: PBO:0053484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 459","termid":"PBO:0053484"}


id: SO:0000566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_C_cluster","synonyms":[{"name":"V VJ J C cluster","type":"exact"},{"name":"V-(VJ)-J-C-CLUSTER","type":"exact"}],"termid":"SO:0000566"}


id: PBO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 5","termid":"PBO:0052587"}


id: GO:0033486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of delphinidin 3-O-glucoside, a basic, water-soluble anthocyanin responsible for blue coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5153","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"delphinidin 3-O-glucoside anabolism","type":"exact"},{"name":"delphinidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"delphinidin 3-O-glucoside formation","type":"exact"},{"name":"delphinidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033486"}


id: PBO:0077410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 145","termid":"PBO:0077410"}


id: PBO:0001063
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy","termid":"PBO:0001063"}


id: PBO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum aminopeptidase 1","termid":"PBO:0046465"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114101],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit Pka1","termid":"PBO:0003165"}


id: PBO:0111874
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter family","termid":"PBO:0111874"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: PBO:0063561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELO antisense RNA 1","termid":"PBO:0063561"}


id: PBO:0065430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 3","termid":"PBO:0065430"}


id: PBO:0075019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-30","termid":"PBO:0075019"}


id: GO:0140975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cellular component of another organism, leading to damage or temporary subversion of that structure. In some cases this can cause malfunctioning of the cells and death of the target organism.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cellular anatomical structure in another organism","synonyms":[{"name":"disruption of cellular component of another organism","type":"broad"}],"termid":"GO:0140975"}


id: GO:0102422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiotrioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiotrioside 1,6-glucosyltransferase activity (obsolete GO:0102422)","termid":"GO:0102422"}


id: PR:O60109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.13c","synonyms":[{"name":"Spom972h-pho8","type":"exact"}],"termid":"PR:O60109"}


id: PBO:0058457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5186","termid":"PBO:0058457"}


id: PBO:0076310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 2","termid":"PBO:0076310"}


id: PBO:0056398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 3","termid":"PBO:0056398"}


id: GO:0006824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cobalt (Co2+) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"cobalt ion transport","synonyms":[{"name":"cobalt transport","type":"exact"}],"termid":"GO:0006824"}


id: GO:0021888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a hypothalamus gonadotrophin-releasing hormone neuron over time, from initial commitment of its fate, to the fully functional differentiated cell.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron development","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron development","type":"related"}],"termid":"GO:0021888"}


id: PBO:0040472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR interacting protein","termid":"PBO:0040472"}


id: PBO:0005908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid uptake transporter (predicted)","termid":"PBO:0005908"}


id: PBO:0057280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 501","termid":"PBO:0057280"}


id: GO:0046670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal cell programmed cell death","synonyms":[{"name":"activation of retinal programmed cell death","type":"narrow"},{"name":"positive regulation of retinal programmed cell death","type":"exact"},{"name":"stimulation of retinal programmed cell death","type":"narrow"},{"name":"up regulation of retinal programmed cell death","type":"exact"},{"name":"up-regulation of retinal programmed cell death","type":"exact"},{"name":"upregulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046670"}


id: GO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrol + X-SO3(-) = HX + phenanthrylsulfate.","definition_xrefs":["EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phenanthrol sulfotransferase activity","synonyms":[{"name":"phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0019111"}


id: GO:1903339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"negatively_regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell wall organization or biogenesis","synonyms":[{"name":"down regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis","type":"exact"},{"name":"down-regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"down-regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"down-regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis","type":"exact"},{"name":"downregulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"downregulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"downregulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"inhibition of cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis","type":"narrow"},{"name":"inhibition of cell wall organization or biogenesis at cellular level","type":"narrow"},{"name":"inhibition of cellular cell wall organisation or biogenesis","type":"narrow"},{"name":"inhibition of cellular cell wall organization or biogenesis","type":"narrow"},{"name":"negative regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"negative regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"negative regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903339"}


id: GO:0090186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pancreatic juice secretion","termid":"GO:0090186"}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: _global:has_input
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has input c iff: p is a process, c is a material entity, c is a participant in p, c is present at the start of p, and the state of c is modified during p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_input","secondary_identifiers":["_global:has_target","RO:0002233","_global:localizes","GOREL:0000016","GOREL:0000503","GOREL:0000753"],"synonyms":[{"name":"has_target","type":"exact"},{"name":"localizes","type":"narrow"}],"termid":"_global:has_input"}


id: PATO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000215 respiratory function (obsolete PATO:0000215)","termid":"PATO:0000215"}


id: PR:O42973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20F10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.03","synonyms":[{"name":"Spom972h-SPBC20F10.03","type":"exact"}],"termid":"PR:O42973"}


id: PBO:0076772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 12","termid":"PBO:0076772"}


id: FYPO:0002316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular squalene level","synonyms":[{"name":"normal cellular squalene accumulation","type":"related"},{"name":"normal cellular squalene level during mitotic cell cycle","type":"related"},{"name":"normal cellular squalene level during vegetative growth","type":"exact"}],"termid":"FYPO:0002316"}


id: PATO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000034 protein concentration (obsolete PATO:0000034)","termid":"PATO:0000034"}


id: PBO:0075548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1 pseudogene 2","termid":"PBO:0075548"}


id: SO:0000500
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type of non-canonical base-pairing. This is less energetically favourable than watson crick base pairing. Hoogsteen GC base pairs only have two hydrogen bonds.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hoogsteen_base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Hoogsteen_base_pair"],"synonyms":[{"name":"Hoogsteen base pair","type":"exact"}],"termid":"SO:0000500"}


id: PBO:0054201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1581","termid":"PBO:0054201"}


id: PBO:0074793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 12B","termid":"PBO:0074793"}


id: GO:0071000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnetism","synonyms":[{"name":"response to magnetic stimulus","type":"exact"}],"termid":"GO:0071000"}


id: FYPO:0000967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000965"},{"relation_name":"is_a","term_name":"decreased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0001458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000967"}


id: PBO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 6","termid":"PBO:0070334"}


id: PR:O60135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lcf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.02","synonyms":[{"name":"Spom972h-lcf1","type":"exact"},{"name":"fatty acid activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60135"}


id: GO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroethene + chloride + acceptor = tetrachloroethene + reduced acceptor. The reaction occurs in the reverse direction.","definition_xrefs":["RHEA:20353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tetrachloroethene reductive dehalogenase activity","secondary_identifiers":["EC:1.21.99.5","MetaCyc:1.97.1.8-RXN"],"synonyms":[{"name":"acceptor:trichloroethene oxidoreductase (chlorinating)","type":"related"},{"name":"tetrachloroethene reductase activity","type":"related"}],"termid":"GO:0050629"}


id: PBO:0062019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 13","termid":"PBO:0062019"}


id: PBO:0074097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 11","termid":"PBO:0074097"}


id: GO:0048140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the male gonad.","definition_xrefs":["GOC:jid","PMID:11591336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst encapsulation","termid":"GO:0048138"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line cyst encapsulation","termid":"GO:0048140"}


id: PBO:0075289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29 pseudogene 2","termid":"PBO:0075289"}


id: PBO:0076950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1","termid":"PBO:0076950"}


id: PBO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 53","termid":"PBO:0072367"}


id: PBO:0059570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 1","termid":"PBO:0059570"}


id: GO:0075159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075159)","synonyms":[{"name":"regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075159"}


id: GO:0045258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme, located in the plasma membrane, that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["ISBN:0198547684","GOC:kd","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045258)","termid":"GO:0045258"}


id: PBO:0090610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase","termid":"PBO:0090610"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: PR:O14210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies2 gene.","definition_xrefs":["UniProtKB:O14210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.05c","synonyms":[{"name":"Spom972h-ies2","type":"exact"}],"termid":"PR:O14210"}


id: PBO:0071783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 11","termid":"PBO:0071783"}


id: GO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major histocompatibility complex class II receptor. These display processed antigens from virally-infected or transformed cells. Class-II-positive cells ('antigen-presenting cells') can take up antigens from outside by endocytosis, degrade them into small peptides, and re-export the peptides (now bound to MHC class II protein) to the cell surface. These peptide-MHC class II complexes can then be recognized by specific CD4+ lymphocytes.","definition_xrefs":["ISBN:0879694971","ISBN:081533642X"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC class II receptor activity (obsolete GO:0045012)","synonyms":[{"name":"MHC class II receptor activity","type":"exact"},{"name":"class II major histocompatibility complex antigen","type":"related"},{"name":"major histocompatibility complex class II receptor","type":"exact"}],"termid":"GO:0045012"}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: PBO:0036450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in ER delivery of tail-anchored membrane proteins (predicted)","termid":"PBO:0036450"}


id: GO:0065004
data:
  {"annotated_genes":["SJAG_00766","SJAG_03217","SJAG_02119","SJAG_00692","SJAG_02607","SJAG_02198","SJAG_01823","SJAG_02303","SJAG_04274","SJAG_03095","SJAG_01378","SJAG_04989","SJAG_02664","SJAG_03956","SJAG_03183","SJAG_05273","SJAG_03900","SJAG_03685","SJAG_00247","SJAG_01475","SJAG_02708","SJAG_03905","SJAG_00307","SJAG_00684","SJAG_04547","SJAG_01771","SJAG_03619","SJAG_01808","SJAG_02458","SJAG_03285","SJAG_04879","SJAG_02465","SJAG_02074","SJAG_03120","SJAG_04272","SJAG_03048","SJAG_02691","SJAG_02908","SJAG_02667","SJAG_02513","SJAG_04257","SJAG_00045","SJAG_01523","SJAG_01708","SJAG_04654","SJAG_02906","SJAG_01707","SJAG_00939","SJAG_02267","SJAG_04696","SJAG_00873","SJAG_04581","SJAG_00756","SJAG_01410","SJAG_04530","SJAG_03867","SJAG_00757","SJAG_02813","SJAG_02872","SJAG_05321","SJAG_00327","SJAG_03007","SJAG_01207","SJAG_04038","SJAG_03220","SJAG_00741","SJAG_04638","SJAG_02174","SJAG_01837","SJAG_04177","SJAG_01611","SJAG_02079","SJAG_04995","SJAG_00718","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102356,95165,98083,90741,88833,107183,91515,109123,112484,114838,113692,84942,95413,86124,98921,103344,85755,111084,110225,114803],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[103346,105942,111403,109572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[92215,96565,88711,103660,106294,98212,95079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[106312,101475,86835,101545,108186,109559,113448],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[99333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[92959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[103665,106300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[86498,106562,95447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[99335,106563,111024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[113941],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905560"},{"annotations":[91118,103734,92489,110546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[104979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[85715,112692,98396],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"},{"annotations":[85775,111192],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[105150,63608,91787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[90194,111384,113347,85975,66462,110800,84675,64271,85345,104495,83464,84416,92074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[99083,112216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[95747,104121,111950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"protein-DNA complex 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complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"DNA-protein complex assembly","type":"exact"}],"termid":"GO:0065004","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0001188":null,"GO:0006294":null,"GO:0006334":null,"GO:0010772":null,"GO:0034080":null,"GO:0045899":null,"GO:0051123":null,"GO:0051382":null,"GO:0070898":null,"GO:0140529":null,"GO:0140530":null,"GO:1902977":null,"GO:1902985":null,"GO:1905324":null,"GO:1905560":null,"GO:1905561":null}}


id: PBO:0071113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 115","termid":"PBO:0071113"}


id: GO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-aspartate transmembrane export from vacuole","termid":"GO:0089703"}


id: GO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism effects a change in the structure or function of its symbiont organism, mediated by a substance secreted by a type IV secretion system in the organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system (obsolete GO:0052426)","synonyms":[{"name":"modification by organism of symbiont morphology or physiology via substance secreted by type IV secretion system","type":"exact"}],"termid":"GO:0052426"}


id: GO:1990733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed between the N-terminus of the giant sarcomeric filament protein titin and the Z-disk ligand, telethonin. The complex is part of the Z-disk of the skeletal and cardiac sarcomere. Telethonin binding to titin might be essential for the initial assembly, stabilization and functional integrity of the titin filament, and hence important for muscle contraction relaxation in mature myofibrils.","definition_xrefs":["GOC:ame","PMID:16407954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Z disc","termid":"GO:0030018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"titin-telethonin complex","synonyms":[{"name":"Titin-Tcap complex","type":"related"}],"termid":"GO:1990733"}


id: GO:0140290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of ADP-ribose from ADP-ribosylserine.","definition_xrefs":["PMID:29234005","PMID:28650317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein de-ADP-ribosylation","termid":"GO:0051725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine ADP-deribosylation","termid":"GO:0140290"}


id: GO:0102550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 2-methyl-6-geranylgeranyl-1,4-benzoquinol = S-adenosyl-L-homocysteine + 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity","secondary_identifiers":["RHEA:38007","MetaCyc:RXN-14917"],"termid":"GO:0102550"}


id: PBO:0055682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member K","termid":"PBO:0055682"}


id: PBO:0040365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 2","termid":"PBO:0040365"}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0079468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 1","termid":"PBO:0079468"}


id: GO:0120021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes oxysterol from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","PMID:20823909","GOC:krc","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transfer activity","termid":"GO:0120015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"oxysterol transfer activity","synonyms":[{"name":"intermembrane oxysterol transfer activity","type":"narrow"},{"name":"oxysterol carrier activity","type":"exact"}],"termid":"GO:0120021"}


id: GO:0038146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the chemokine CXCL12 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling","Wikipedia:Stromal_cell-derived_factor-1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 12 signaling pathway","synonyms":[{"name":"CXCL12 signaling pathway","type":"exact"},{"name":"CXCL12-activated CXCR7 signaling pathway","type":"narrow"},{"name":"SDF1 signaling pathway","type":"exact"},{"name":"stromal cell-derived factor-1 signaling pathway","type":"exact"}],"termid":"GO:0038146"}


id: PBO:0056045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 maturation factor of ABCE1","termid":"PBO:0056045"}


id: GO:0004643
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114971],"is_not":false,"summary":null,"term":"GO:0004643"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide.","definition_xrefs":["EC:2.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:22192","Reactome:R-HSA-73798","MetaCyc:AICARTRANSFORM-RXN"],"synonyms":[{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazole-carboxamide N-formyltransferase activity","type":"related"},{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5-amino-1-ribosyl-4-imidazolecarboxamide 5'-phosphate transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribonucleotide transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribotide transformylase activity","type":"related"},{"name":"AICAR formyltransferase activity","type":"related"},{"name":"AICAR transformylase activity","type":"related"},{"name":"aminoimidazolecarboxamide ribonucleotide transformylase activity","type":"related"}],"termid":"GO:0004643","terms_by_termid":{"GO:0004643":null}}


id: PBO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-V, dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (predicted)","termid":"PBO:0000274"}


id: PBO:0089142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain Sre1 cleavage protein","termid":"PBO:0089142"}


id: GO:0071106
data:
  {"annotated_genes":["SJAG_04325","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[86885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106","terms_by_termid":{"GO:0035348":null,"GO:1990559":null}}


id: PBO:0072387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 13","termid":"PBO:0072387"}


id: PBO:0070183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 99 pseudogene","termid":"PBO:0070183"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: PBO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin","termid":"PBO:0001696"}


id: PBO:0060214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase","termid":"PBO:0060214"}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: PBO:0040608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAH domain and coiled-coil containing 1","termid":"PBO:0040608"}


id: GO:0070472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle contraction","synonyms":[{"name":"regulation of myometrial contraction","type":"exact"},{"name":"regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"regulation of myometrium contraction","type":"exact"}],"termid":"GO:0070472"}


id: PBO:0030026
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_agglutination","termid":"PBO:0030026"}


id: GO:0004689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a.","definition_xrefs":["EC:2.7.11.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium/calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"phosphorylase kinase activity","secondary_identifiers":["MetaCyc:2.7.11.19-RXN","GO:0008606","Reactome:R-HSA-71588","Reactome:R-HSA-71541","Reactome:R-HSA-453337"],"synonyms":[{"name":"ATP:phosphorylase-b phosphotransferase activity","type":"related"},{"name":"PHK","type":"related"},{"name":"STK17","type":"related"},{"name":"dephosphophosphorylase kinase activity","type":"related"},{"name":"glycogen phosphorylase kinase activity","type":"related"},{"name":"phosphorylase B kinase activity","type":"related"},{"name":"phosphorylase kinase (phosphorylating) activity","type":"related"},{"name":"phosphorylase kinase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004689"}


id: PBO:0058676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6804","termid":"PBO:0058676"}


id: PBO:0038870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aarF domain containing kinase 1","termid":"PBO:0038870"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: PBO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 19, pseudogene","termid":"PBO:0070062"}


id: PBO:0069817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1103, pseudogene","termid":"PBO:0069817"}


id: GO:1901928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cadinene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cadinene biosynthetic process","synonyms":[{"name":"cadinene anabolism","type":"exact"},{"name":"cadinene biosynthesis","type":"exact"},{"name":"cadinene formation","type":"exact"},{"name":"cadinene synthesis","type":"exact"}],"termid":"GO:1901928"}


id: PBO:0077668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13C","termid":"PBO:0077668"}


id: PBO:0046291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 1","termid":"PBO:0046291"}


id: PBO:0031156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_mitotic_cell_cycle_phase","termid":"PBO:0031156"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: PBO:0027350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_cell_separation_after_cytokinesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027350"}


id: PBO:0080961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 4","termid":"PBO:0080961"}


id: GO:0000786
data:
  {"annotated_genes":["SJAG_03542","SJAG_03941","SJAG_00302","SJAG_00303","SJAG_00336","SJAG_01873","SJAG_00335","SJAG_03543","SJAG_03942","SJAG_00307","SJAG_03047"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87155,87156,87157,87830,98012,98013,98014,98048,98049,98050,98423,108575,108576,108577,108599,108600,108601,113699,113712],"is_not":false,"summary":null,"term":"GO:0000786"},{"annotations":[98077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043505"},{"annotations":[115159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nucleosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"secondary_identifiers":["Wikipedia:Nucleosome","GO:0005718","GO:0000788","GO:0000787"],"synonyms":[{"name":"cytoplasmic nucleosome","type":"narrow"},{"name":"nuclear nucleosome","type":"narrow"}],"termid":"GO:0000786","terms_by_termid":{"GO:0000786":null,"GO:0043505":null,"GO:0140573":null}}


id: GO:0039677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the viral genome or a viral particle out of the host cell nucleus that involves disruption of the nuclear membrane envelope by the virus.","definition_xrefs":["VZ:2176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exit of virus from host cell nucleus","termid":"GO:0039674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit of virus from host cell nucleus via nuclear envelope disassembly","synonyms":[{"name":"exit of virus from host cell nucleus via nuclear envelope breakdown","type":"exact"}],"termid":"GO:0039677"}


id: GO:0030258
data:
  {"annotated_genes":["SJAG_02788","SJAG_00706","SJAG_00413","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99989],"is_not":false,"summary":null,"term":"GO:0030258"},{"annotations":[107837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[102518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[88245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more fatty acids in a lipid, resulting in a change in the properties of the lipid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02788":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030258","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0019395":null,"GO:0030258":null}}


id: PBO:0080862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 3","termid":"PBO:0080862"}


id: PBO:0057452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 571","termid":"PBO:0057452"}


id: PBO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.49","termid":"PBO:0003201"}


id: GO:0097523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA-RNA complex composed of RNA polymerase, template DNA, and an RNA transcript.","definition_xrefs":["GOC:txnOH","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex","termid":"GO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription ternary complex","synonyms":[{"name":"transcription protein-DNA-RNA complex","type":"exact"}],"termid":"GO:0097523"}


id: PBO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof6","termid":"PBO:0005704"}


id: GO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast outer membrane (obsolete GO:0031359)","synonyms":[{"name":"integral to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031359"}


id: PBO:0048991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 3","termid":"PBO:0048991"}


id: PBO:0029734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_aculeacin_A","termid":"PBO:0029734"}


id: PBO:0048102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO pseudogene 1","termid":"PBO:0048102"}


id: PBO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family","termid":"PBO:0000156"}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: GO:0021619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the hypoglossal nerve to attain its fully functional state. This motor nerve innervates all the intrinsic and all but one of the extrinsic muscles of the tongue.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"hypoglossal nerve development","termid":"GO:0021566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoglossal nerve maturation","synonyms":[{"name":"CN XII maturation","type":"related"}],"termid":"GO:0021619"}


id: GO:0099188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}


id: PBO:0069859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1146, pseudogene","termid":"PBO:0069859"}


id: GO:0034056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen response element (ERE), a conserved sequence found in the promoters of genes whose expression is regulated in response to estrogen.","definition_xrefs":["PMID:15036253","PMID:17975005","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"estrogen response element binding","synonyms":[{"name":"ERE binding","type":"exact"}],"termid":"GO:0034056"}


id: PBO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1","termid":"PBO:0090736"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: GO:0075102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont MAP kinase-mediated signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont MAP kinase-mediated signal transduction (obsolete GO:0075102)","termid":"GO:0075102"}


id: PBO:0070273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 8","termid":"PBO:0070273"}


id: SO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls in an intergenic region that is 1 kb or less between 2 genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_1kb_variant","synonyms":[{"name":"ANNOVAR:upstream;downstream","type":"exact"}],"termid":"SO:0002074"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: PR:Q9UTE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MAK16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23405:SF4","OMA:SCHPO00377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mak16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.06","secondary_identifiers":["UniProtKB:Q9UTE6"],"synonyms":[{"name":"Spom972h-MAK16","type":"exact"}],"termid":"PR:Q9UTE6"}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_02605","SJAG_03591","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89370,106541,87787,94900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[87788,94901,89371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[89372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0071422
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97678],"is_not":false,"summary":null,"term":"GO:0071422"},{"annotations":[97677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The process in which succinate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transport","termid":"GO:0015744"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"succinate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"succinate membrane transport","type":"exact"},{"name":"transmembrane succinate transport","type":"exact"}],"termid":"GO:0071422","terms_by_termid":{"GO:0071422":null,"GO:0098720":null}}


id: GO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell acquires specialized features of a squamous basal epithelial stem cell of the prostate.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"squamous basal epithelial stem cell differentiation involved in prostate gland acinus development","termid":"GO:0060529"}


id: GO:0033988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7alpha,12alpha-dihydroxy-3-oxochol-4-en-24-oate = 12alpha-hydroxy-3-oxochola-4,6-dien-24-oate + H2O.","definition_xrefs":["RHEA:10436","PMID:26650892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"bile-acid 7alpha-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R07318","EC:4.2.1.106","MetaCyc:BA7DEHYDRA-RXN"],"synonyms":[{"name":"7alpha,12alpha-dihydroxy-3-oxochol-4-enoate hydro-lyase (12alpha-hydroxy-3-oxochola-4,6-dienoate-forming) activity","type":"related"},{"name":"7alpha,12alpha-dihydroxy-3-oxochol-4-enoate hydro-lyase activity","type":"related"},{"name":"BA7 alpha dehydratase activity","type":"related"}],"termid":"GO:0033988"}


id: PBO:0045376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 2, regulatory","termid":"PBO:0045376"}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: GO:0140707
data:
  {"annotated_genes":["SJAG_01745","SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115176,87400,85147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"}]},"cv_name":"molecular_function","definition":"Binding to chromatin and the nuclear inner membrane, in order to establish and maintain the heterochromatin location and organization, or to enable equal segregation of the nuclear membrane during mitosis.","definition_xrefs":["PMID:24184107","PMID:31048766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"chromatin-nuclear membrane anchor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0140707","terms_by_termid":{"GO:0062239":null}}


id: PBO:0089941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S15","termid":"PBO:0089941"}


id: PBO:0068163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 470","termid":"PBO:0068163"}


id: GO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that catalyzes the cleavage of complement components C3 and C5, and acts in the classical pathway of complement activation; consists of one monomer of C2a and one monomer of C4b; C2a is the catalytic subunit, but cannot catalyze cleavage alone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"classical-complement-pathway C3/C5 convertase complex","termid":"GO:0005601"}


id: PBO:0078061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 51 (pseudogene)","termid":"PBO:0078061"}


id: PR:Q9P7Q7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.08","synonyms":[{"name":"Spom972h-mak1","type":"exact"},{"name":"his-Asp phosphorelay kinase phk3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q7"}


id: PBO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase interacting protein involved in vesicle tethering at the Golgi","termid":"PBO:0090108"}


id: PBO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 3","termid":"PBO:0075226"}


id: GO:1901170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of naphthalene.","definition_xrefs":["PMID:11133965","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"naphthalene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:naph","GO:0018931"],"synonyms":[{"name":"naphthalene breakdown","type":"exact"},{"name":"naphthalene catabolism","type":"exact"},{"name":"naphthalene degradation","type":"exact"},{"name":"naphthalene metabolic process","type":"related"},{"name":"naphthalene metabolism","type":"related"}],"termid":"GO:1901170"}


id: GO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenine + H2O = hypoxanthine + NH3.","definition_xrefs":["EC:3.5.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"adenine deaminase activity","secondary_identifiers":["RHEA:23688","MetaCyc:ADENINE-DEAMINASE-RXN"],"synonyms":[{"name":"ADase activity","type":"related"},{"name":"adenase activity","type":"related"},{"name":"adenine aminase activity","type":"related"},{"name":"adenine aminohydrolase activity","type":"related"}],"termid":"GO:0000034"}


id: PBO:0109129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 1","termid":"PBO:0109129"}


id: GO:0018546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrobenzene + 2 NADPH + 2 H+ = hydroxyaminobenzene + 2 NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-8815","PMID:16517619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrobenzene nitroreductase activity","secondary_identifiers":["EC:1.7.1.16","UM-BBD_enzymeID:r0303","MetaCyc:RXN-8833","RHEA:52884"],"termid":"GO:0018546"}


id: PBO:0083320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF IRC24/YIR036C","termid":"PBO:0083320"}


id: PBO:0062553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily R member 1 pseudogene","termid":"PBO:0062553"}


id: PBO:0001924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor (predicted)","termid":"PBO:0001924"}


id: PBO:0080562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 2","termid":"PBO:0080562"}


id: PR:P87171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prs5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.06c","synonyms":[{"name":"Spom972h-prs5","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87171"}


id: GO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","GOC:mah","GOC:tb","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031447"}


id: GO:0045341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of major histocompatibility protein class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"MHC class I biosynthetic process","synonyms":[{"name":"MHC class I anabolism","type":"exact"},{"name":"MHC class I biosynthesis","type":"exact"},{"name":"MHC class I formation","type":"exact"},{"name":"MHC class I synthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045341"}


id: PATO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's penetrating or permeating another substance or area.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrative","synonyms":[{"name":"infiltrating","type":"exact"}],"termid":"PATO:0002103"}


id: FYPO:0003305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which polar microtubules fail to interdigitate properly, and two partially or completely separated microtubule structures, usually V-shaped, each corresponding to one half of the spindle, are present.","definition_xrefs":["PomBase:mah","PMID:9348288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0000631","FYPO:0002399","FYPO:0005447"],"is_obsolete":false,"name":"separate mitotic half spindles present","synonyms":[{"name":"broken spindle interzone","type":"related"},{"name":"broken spindle midzone","type":"related"},{"name":"loss of interdigitation between mitotic half spindles","type":"exact"},{"name":"separate half spindles present during mitosis","type":"exact"},{"name":"separate half spindles present during mitotic cell cycle","type":"related"},{"name":"separate mitotic half spindles present during vegetative growth","type":"exact"},{"name":"spindle fraying","type":"related"}],"termid":"FYPO:0003305"}


id: PBO:0110065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Pan1","termid":"PBO:0110065"}


id: GO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + L-pipecolate = NADPH + delta1-piperideine-2-carboxylate.","definition_xrefs":["EC:1.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"delta1-piperideine-2-carboxylate reductase activity","secondary_identifiers":["RHEA:12524","MetaCyc:RXN-8166"],"synonyms":[{"name":"1,2-didehydropipecolate reductase activity","type":"related"},{"name":"1,2-didehydropipecolic reductase activity","type":"related"},{"name":"D1-piperideine-2-carboxylate reductase activity","type":"exact"},{"name":"L-pipecolate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"P2C reductase activity","type":"related"},{"name":"delta 1-piperideine-2-carboxylate reductase activity","type":"exact"}],"termid":"GO:0047125"}


id: PBO:0086610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086610"}


id: MOD:01881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-valine residue by a free radical process effectively releasing a hydrogen molecule and forming 3-(L-phenylalan-2'-yl)-L-valine.","definition_xrefs":["RESID:AA0565","PubMed:21596985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-valine residue","termid":"MOD:02059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(L-phenylalan-2'-yl)-L-valine","synonyms":[{"name":"(2S)-2-amino-4-(2-[(2S)-2-amino-2-carboxyethyl]phenyl)-3-methylbutanoic acid","type":"exact"},{"name":"3-(L-phenylalan-2'-yl)-L-valine","type":"exact"},{"name":"symerythrin valine-phenylalanine cross-link","type":"exact"}],"termid":"MOD:01881"}


id: GO:0102429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: genistin + UDP-alpha-D-glucose = genistin 7-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete genistein-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102429)","termid":"GO:0102429"}


id: PBO:0001138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR39","termid":"PBO:0001138"}


id: GO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a protein.","definition_xrefs":["PMID:26906419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein ubiquitination","synonyms":[{"name":"protein ubiquitinylation","type":"exact"},{"name":"protein ubiquitylation","type":"exact"}],"termid":"GO:0016567"}


id: GO:1900052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"retinoic acid biosynthetic process","termid":"GO:0002138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"regulation of retinoic acid biosynthetic process","synonyms":[{"name":"regulation of retinoic acid anabolic process","type":"exact"}],"termid":"GO:1900052"}


id: PBO:0041488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C11orf98 pseudogene 3","termid":"PBO:0041488"}


id: PBO:0078962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-5","termid":"PBO:0078962"}


id: FYPO:0007347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 36 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K36 methylation during vegetative growth","termid":"FYPO:0002920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K36 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H3 K36 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K36 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K36me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K36 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007347"}


id: GO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-19 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-19 production","termid":"GO:0032662"},{"relation_name":"negatively_regulates","term_name":"interleukin-19 production","termid":"GO:0032622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-19 production","secondary_identifiers":["GO:0045385"],"synonyms":[{"name":"down regulation of interleukin-19 production","type":"exact"},{"name":"down-regulation of interleukin-19 production","type":"exact"},{"name":"downregulation of interleukin-19 production","type":"exact"},{"name":"inhibition of interleukin-19 production","type":"narrow"},{"name":"negative regulation of IL-19 production","type":"exact"},{"name":"negative regulation of interleukin-19 biosynthetic process","type":"narrow"}],"termid":"GO:0032702"}


id: MOD:01143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:8420941","PubMed:2222853","RESID:AA0429","PubMed:3208761","PubMed:1559975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15,16-dihydrobiliverdin-bis-L-cysteine","synonyms":[{"name":"(16R)-8,12-bis(2-carboxyethyl)-3-[2-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-[(1Xi)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"15,16-dihydrobiliverdin-bis-L-cysteine","type":"exact"},{"name":"3'',18'-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3beta,18alpha-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-18-(1-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"BINDING  15,16-dihydrobiliverdin (covalent; via 2 links)","type":"exact"},{"name":"DBV","type":"exact"}],"termid":"MOD:01143"}


id: GO:0052615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-kaur-16-ene + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = ent-kaur-16-en-19-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:32323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ent-kaurene oxidase activity","secondary_identifiers":["EC:1.14.14.86","MetaCyc:1.14.13.78-RXN","MetaCyc:RXN-7580"],"termid":"GO:0052615"}


