# terms

id: PBO:0089687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1","termid":"PBO:0089687"}


id: PR:Q1MTN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16D10.01c gene.","definition_xrefs":["UniProtKB:Q1MTN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone of rpl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.01c","synonyms":[{"name":"Spom972h-SPBC16D10.01c","type":"exact"}],"termid":"PR:Q1MTN8"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: PBO:0039283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 12, pseudogene","termid":"PBO:0039283"}


id: PBO:0048800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAS antisense RNA 1","termid":"PBO:0048800"}


id: PBO:0055578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3014","termid":"PBO:0055578"}


id: PR:O94666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.08c","secondary_identifiers":["UniProtKB:O94666"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC158 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR3A","type":"exact"}],"termid":"PR:O94666"}


id: PBO:0049218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 2","termid":"PBO:0049218"}


id: GO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in pronephros development","synonyms":[{"name":"cell proliferation involved in pronephric kidney development","type":"exact"}],"termid":"GO:0039015"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: GO:0002763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte differentiation","synonyms":[{"name":"activation of myeloid leukocyte differentiation","type":"narrow"},{"name":"stimulation of myeloid leukocyte differentiation","type":"narrow"},{"name":"up regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"up-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"upregulation of myeloid leukocyte differentiation","type":"exact"}],"termid":"GO:0002763"}


id: PBO:0112998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; regulates intracellular pH; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0112998"}


id: PBO:0040861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLVRB pseudogene 1","termid":"PBO:0040861"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: PBO:0039059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 8","termid":"PBO:0039059"}


id: PBO:0071220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 61","termid":"PBO:0071220"}


id: FYPO:0005694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules occurs to a lower extent than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased interphase microtubule nucleation","synonyms":[{"name":"decreased cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"decreased interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"decreased interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"decreased microtubule nucleation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased microtubule nucleation during mitotic interphase","type":"exact"},{"name":"reduced interphase microtubule nucleation","type":"exact"}],"termid":"FYPO:0005694"}


id: GO:0033971
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112385],"is_not":false,"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H+.","definition_xrefs":["EC:3.5.2.17","RHEA:23736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"hydroxyisourate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.5.2.17-RXN","KEGG_REACTION:R06601"],"synonyms":[{"name":"5-hydroxyisourate amidohydrolase activity","type":"related"},{"name":"5-hydroxyisourate hydrolase activity","type":"related"},{"name":"HIUHase activity","type":"related"}],"termid":"GO:0033971","terms_by_termid":{"GO:0033971":null}}


id: GO:0000978
data:
  {"annotated_genes":["SJAG_04036","SJAG_02956","SJAG_06599","SJAG_00979","SJAG_02311","SJAG_05343","SJAG_00124","SJAG_02810","SJAG_01062","SJAG_04855","SJAG_00163","SJAG_01243","SJAG_04749","SJAG_02472","SJAG_03183","SJAG_00987","SJAG_01532","SJAG_00802","SJAG_04381","SJAG_03519","SJAG_03484","SJAG_02218","SJAG_00698","SJAG_03918","SJAG_02149","SJAG_00861","SJAG_02709","SJAG_01157","SJAG_00693","SJAG_00386","SJAG_02938","SJAG_00210","SJAG_03879","SJAG_03473","SJAG_04421","SJAG_04092","SJAG_00792","SJAG_02406","SJAG_05247","SJAG_03143","SJAG_03735","SJAG_01307","SJAG_03241","SJAG_02326","SJAG_05153","SJAG_02730","SJAG_05288","SJAG_02048","SJAG_04584","SJAG_03346","SJAG_04839","SJAG_02569","SJAG_01343","SJAG_00304","SJAG_00037","SJAG_03538","SJAG_01441","SJAG_02252","SJAG_01930","SJAG_04249","SJAG_01583","SJAG_06576","SJAG_01740","SJAG_04712","SJAG_02138","SJAG_01725","SJAG_04388","SJAG_03388","SJAG_05006","SJAG_03911","SJAG_01694","SJAG_04191","SJAG_04009","SJAG_05337","SJAG_00266","SJAG_00664","SJAG_02052","SJAG_04813","SJAG_03622","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77188,79206,83673,84039,84109,84476,84532,85109,85532,86158,87960,88511,88800,89281,89341,89342,89758,90117,90771,90787,91741,92089,92330,92620,92971,93102,93341,93417,93566,93567,93568,93569,93570,94152,94457,95525,95830,96149,96521,97510,98067,98252,98304,98713,99572,99971,100455,100460,100780,101838,102108,102251,102366,102726,103001,103053,103582,103980,104226,104635,104808,105050,105186,105187,105354,105694,106732,106871,106887,106903,107065,107890,107929,107930,109416,109693,110093,110586,110839,112083,112488,112628,113492,114058,114345],"is_not":false,"summary":null,"term":"GO:0000978"},{"annotations":[104809,103054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding","termid":"GO:0000977"},{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA binding","termid":"GO:0000987"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00124":null,"SJAG_00163":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00304":null,"SJAG_00386":null,"SJAG_00664":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00979":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01157":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01343":null,"SJAG_01441":null,"SJAG_01532":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01725":null,"SJAG_01740":null,"SJAG_01930":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02406":null,"SJAG_02472":null,"SJAG_02569":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02810":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03346":null,"SJAG_03388":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03911":null,"SJAG_03918":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04191":null,"SJAG_04249":null,"SJAG_04381":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04584":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04813":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05006":null,"SJAG_05153":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05337":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0000976","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000980"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II promoter proximal region sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding","type":"related"}],"termid":"GO:0000978","terms_by_termid":{"GO:0000978":null,"GO:0044377":null}}


id: GO:1900116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of signal transduction that takes place in extracellular region.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"extracellular regulation of signal transduction","termid":"GO:1900115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extracellular negative regulation of signal transduction","synonyms":[{"name":"down regulation of signal transduction in extracellular region","type":"exact"},{"name":"down-regulation of signal transduction in extracellular region","type":"exact"},{"name":"downregulation of signal transduction in extracellular region","type":"exact"},{"name":"extracellular inhibition of signaling pathway","type":"narrow"},{"name":"inhibition of signal transduction in extracellular region","type":"narrow"},{"name":"negative regulation of signaling pathway in extracellular region","type":"exact"},{"name":"negative regulation of signalling pathway in extracellular region","type":"exact"}],"termid":"GO:1900116"}


id: FYPO:0003591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is abnormal. The protein whose binding to the protein complex is affected may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein complex binding","termid":"FYPO:0003591"}


id: GO:0007437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the adult salivary gland are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult salivary gland morphogenesis","termid":"GO:0007437"}


id: GO:0009213
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine deoxyribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate catabolic process","termid":"GO:0009149"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009213","terms_by_termid":{"GO:0046081":null}}


id: GO:0019773
data:
  {"annotated_genes":["SJAG_00778","SJAG_05316","SJAG_00808","SJAG_04306","SJAG_04357","SJAG_02562","SJAG_02502"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84585,92505,95776,97905,107399,110644,111569],"is_not":false,"summary":null,"term":"GO:0019773"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["PMID:10854779","GOC:rb","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00778":null,"SJAG_00808":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome core complex, alpha-subunit complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019773","terms_by_termid":{"GO:0019773":null}}


id: GO:1902924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate) from glucose.","definition_xrefs":["GOC:mengo_curators","PMID:24425304","GO_REF:0000092","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process from glucose","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) formation from glucose","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis from glucose","type":"exact"}],"termid":"GO:1902924"}


id: GO:0005106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of proteins that interact with the ephrin receptors.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete ephrin (obsolete GO:0005106)","synonyms":[{"name":"ephrin","type":"exact"}],"termid":"GO:0005106"}


id: PATO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001041 relative amplitude (obsolete PATO:0001041)","termid":"PATO:0001041"}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: GO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mitochondrion along a microfilament, mediated by motor proteins.","definition_xrefs":["GOC:mah","PMID:15979253","PMID:16306220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"establishment of mitochondrion localization","termid":"GO:0051654"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrion migration along actin filament","synonyms":[{"name":"mitochondrial migration along actin filament","type":"exact"},{"name":"mitochondrial migration along microfilament","type":"exact"},{"name":"mitochondrial migration, actin-mediated","type":"exact"},{"name":"mitochondrion migration along microfilament","type":"exact"},{"name":"mitochondrion transport along actin filament","type":"exact"}],"termid":"GO:0034642"}


id: PBO:0031377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle","termid":"PBO:0031377"}


id: PBO:0055780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 2","termid":"PBO:0055780"}


id: PBO:0002992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate O-methyltransferase Pcm2 (predicted)","termid":"PBO:0002992"}


id: GO:0018964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining. It is used mainly in the preparation of alkylates for gasoline and in the production of polypropylene, acrylonitrile, propylene oxide and a number of other industrial chemicals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"propylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene metabolism","type":"exact"}],"termid":"GO:0018964"}


id: MOD:00342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to N-methyl-L-leucine.","definition_xrefs":["PubMed:11875433","RESID:AA0337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"},{"relation_name":"is_a","term_name":"N-methylated leucine","termid":"MOD:01808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-leucine","synonyms":[{"name":"(S)-2-methylamino-4-methylpentanoic acid","type":"exact"},{"name":"2-(methylamino)-4-methyl-valeric acid","type":"exact"},{"name":"MOD_RES N-methylleucine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methyl-L-leucine","type":"exact"},{"name":"N-methylated L-leucine","type":"exact"},{"name":"N-methylleucine","type":"exact"},{"name":"NMe1Leu","type":"exact"}],"termid":"MOD:00342"}


id: GO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4-nitroquinoline N-oxide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 4-nitroquinoline N-oxide","termid":"GO:0072724"}


id: GO:0102457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(4-hydroxy-3-methoxybenzoyl)-beta-D-glucose + cyanidin 3-O-beta-D-glucoside = cyanidin 3,7-di-O-beta-D-glucoside + vanillate.","definition_xrefs":["RHEA:35431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 7-O-glucosyltransferase (acyl-glucose) activity","secondary_identifiers":["EC:2.4.1.300","MetaCyc:RXN-13969"],"synonyms":[{"name":"cyanidin 3-O-glucoside 7-O-glucosyltransferase (vanilloyl-glucose dependent) activity","type":"related"}],"termid":"GO:0102457"}


id: GO:1990540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a manganese ion is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:12890866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial manganese ion transmembrane transport","termid":"GO:1990540"}


id: FYPO:0005232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a protein complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the protein complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal protein complex binding","termid":"FYPO:0005232"}


id: PBO:0039417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angel homolog 2","termid":"PBO:0039417"}


id: PBO:0081669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 592","termid":"PBO:0081669"}


id: PBO:0077067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3","termid":"PBO:0077067"}


id: PBO:0086064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that influences nuclear pore distribution; co-purifies with ribosomes; contains a GYF domain, which bind proline-rich sequences; deletion extends chronological lifespan; SYH1 has a paralog, SMY2, that arose from the whole genome duplication","termid":"PBO:0086064"}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: GO:0032691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050713","GO:0050724"],"synonyms":[{"name":"down regulation of interleukin-1 beta production","type":"exact"},{"name":"down-regulation of interleukin-1 beta production","type":"exact"},{"name":"downregulation of interleukin-1 beta production","type":"exact"},{"name":"inhibition of interleukin-1 beta production","type":"narrow"},{"name":"negative regulation of IL-1 beta production","type":"exact"},{"name":"negative regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032691"}


id: PBO:0049097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 155","termid":"PBO:0049097"}


id: GO:0097023
data:
  {"annotated_genes":["SJAG_04242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96078,110605],"is_not":false,"summary":null,"term":"GO:0097023"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose-6-phosphate = dihydroxyacetone + D-glyceraldehyde-3-phosphate.","definition_xrefs":["PMID:11120740","GOC:imk","PMID:21290439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"fructose 6-phosphate aldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:28002"],"termid":"GO:0097023","terms_by_termid":{"GO:0097023":null}}


id: PBO:0077065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 1 pseudogene 1","termid":"PBO:0077065"}


id: PBO:0070647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 18","termid":"PBO:0070647"}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: PBO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization dependent on F-actin","termid":"PBO:0003528"}


id: GO:0006829
data:
  {"annotated_genes":["SJAG_01803","SJAG_00328","SJAG_03528","SJAG_00222","SJAG_04185","SJAG_01078","SJAG_01990","SJAG_02968"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[109221,100187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[89816,89817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[86505,100324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[86506,100325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062111"},{"annotations":[97249,100326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of zinc (Zn II) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc II ion transport","type":"exact"},{"name":"zinc transport","type":"exact"}],"termid":"GO:0006829","terms_by_termid":{"GO:0062111":null,"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: PBO:0029615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029615"}


id: PBO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule","termid":"PBO:0042368"}


id: FYPO:0001440
data:
  {"alleles_by_uniquename":{"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_04349:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04349","name":"vps28delta","uniquename":"SJAG_04349:allele-1"},"SJAG_04912:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04912","name":"vps25delta","uniquename":"SJAG_04912:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115251,115252,115253],"is_not":false,"summary":null,"term":"FYPO:0001440"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein complex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03250":null,"SJAG_04349":null,"SJAG_04912":null},"genotype_count":3,"genotypes_by_uniquename":{"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]},"vps25delta":{"display_name":"vps25delta","display_uniquename":"vps25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04912:allele-1","expression":"Null"}]}]},"vps28delta":{"display_name":"vps28delta","display_uniquename":"vps28delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04349:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein complex localization","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_04349","SJAG_04912","SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta","vps25delta","vps28delta"],"synonyms":[{"name":"abnormal cellular protein complex localization","type":"exact"},{"name":"abnormal protein complex localisation","type":"exact"},{"name":"abnormal protein complex localization during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex localization during vegetative growth","type":"exact"}],"termid":"FYPO:0001440","terms_by_termid":{"FYPO:0001440":null,"FYPO_EXT:0000001":null,"GO:0000815":null}}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: PBO:0078643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-1","termid":"PBO:0078643"}


id: GO:1902059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","PMID:23480775","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"negatively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"down regulation of ascus development","type":"narrow"},{"name":"down regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"down-regulation of ascus development","type":"narrow"},{"name":"down-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"down-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"down-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"down-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"downregulation of ascus development","type":"narrow"},{"name":"downregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"downregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"downregulation of perfect stage fruiting body development","type":"narrow"},{"name":"downregulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"inhibition of ascus development","type":"narrow"},{"name":"inhibition of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"inhibition of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"inhibition of perfect stage fruiting body development","type":"narrow"},{"name":"inhibition of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"negative regulation of ascus development","type":"narrow"},{"name":"negative regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"negative regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"negative regulation of perfect stage fruiting body development","type":"narrow"}],"termid":"GO:1902059"}


id: GO:0060794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the leaflet are generated and organized.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound leaf morphogenesis","termid":"GO:0060777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaflet morphogenesis","termid":"GO:0060794"}


id: PBO:0076728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcobalamin 1","termid":"PBO:0076728"}


id: PR:O60067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13G1.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum membrane protein 65 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.05","synonyms":[{"name":"Spom972h-SPBC13G1.05","type":"exact"}],"termid":"PR:O60067"}


id: PBO:0108623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO conjugating enzyme E2 Hus5/Ubc9","termid":"PBO:0108623"}


id: GO:0043380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of memory T cell differentiation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"memory T cell differentiation","termid":"GO:0043379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of memory T cell differentiation","synonyms":[{"name":"regulation of memory T cell development","type":"related"},{"name":"regulation of memory T lymphocyte differentiation","type":"exact"},{"name":"regulation of memory T-cell differentiation","type":"exact"},{"name":"regulation of memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043380"}


id: GO:0008291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:jl","GOC:nln","ISBN:0192800752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylcholine metabolic process","synonyms":[{"name":"acetylcholine metabolism","type":"exact"}],"termid":"GO:0008291"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.57","RHEA:24144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["KEGG_REACTION:R03493","MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN","UM-BBD_reactionID:r1167"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: GO:0033498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactose, via the intermediate D-galactonate.","definition_xrefs":["GOC:mah","MetaCyc:GALDEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose catabolic process","termid":"GO:0019388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactose catabolic process via D-galactonate","synonyms":[{"name":"galactose breakdown via D-galactonate","type":"exact"},{"name":"galactose catabolism via D-galactonate","type":"exact"},{"name":"galactose degradation via D-galactonate","type":"exact"}],"termid":"GO:0033498"}


id: GO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded DNA molecule, that contributes to the packing of viral DNA into a capsid.","definition_xrefs":["GOC:bm","PMID:17501915"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA translocase activity involved in viral DNA genome packaging (obsolete GO:0039631)","synonyms":[{"name":"viral DNA packaging activity","type":"related"},{"name":"viral DNA packaging motor activity","type":"related"}],"termid":"GO:0039631"}


id: PBO:0081694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 616","termid":"PBO:0081694"}


id: PBO:0073123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog A, signal peptidase complex subunit","termid":"PBO:0073123"}


id: PBO:0086772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5p of TOM (Translocase of the Mitochondrial Outer Membrane) complex; YDR056C is not an essential protein","termid":"PBO:0086772"}


id: PBO:0027584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ferrozine","termid":"PBO:0027584"}


id: PBO:0067761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 61","termid":"PBO:0067761"}


id: PBO:0062737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 4","termid":"PBO:0062737"}


id: PBO:0000534
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex binds MCB 5'-ACGCGT-3'","termid":"PBO:0000534"}


id: PATO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000774 bizarre gate (obsolete PATO:0000774)","termid":"PATO:0000774"}


id: PBO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 8","termid":"PBO:0050230"}


id: GO:0046679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to streptomycin","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"related"}],"termid":"GO:0046679"}


id: GO:0030163
data:
  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regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null,"PMID:35226668":null},"synonyms":[{"name":"down regulation of gene expression, epigenetic","type":"exact"},{"name":"down-regulation of gene expression, epigenetic","type":"exact"},{"name":"downregulation of gene expression, epigenetic","type":"exact"},{"name":"gene silencing","type":"related"},{"name":"inhibition of gene expression, epigenetic","type":"narrow"}],"termid":"GO:0045814","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0045814":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0141005":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 2","termid":"PBO:0043890"}


id: GO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1.","definition_xrefs":["GOC:mah","PMID:11865071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"VCB complex","synonyms":[{"name":"VHL complex","type":"exact"},{"name":"pVHL-elongin C-elongin B complex","type":"exact"},{"name":"von Hippel-Lindau tumor suppressor complex","type":"exact"}],"termid":"GO:0030891"}


id: GO:0050151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-10-hydroxystearate = H2O + oleate.","definition_xrefs":["EC:4.2.1.53","RHEA:21852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oleate hydratase activity","secondary_identifiers":["KEGG_REACTION:R02813","MetaCyc:OLEATE-HYDRATASE-RXN"],"synonyms":[{"name":"(R)-10-hydroxystearate 10-hydro-lyase (oleate-forming)","type":"related"},{"name":"(R)-10-hydroxystearate 10-hydro-lyase activity","type":"related"}],"termid":"GO:0050151"}


id: GO:0102199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dinitrogen oxide + H2O + NAD(P) = 2 nitric oxide + H+ + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.7.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitric oxide reductase (NAD(P)H) activity","secondary_identifiers":["MetaCyc:RXN-12112"],"synonyms":[{"name":"nitric oxide reductase activity (NAD(P)H-dependent) activity","type":"exact"}],"termid":"GO:0102199"}


id: SO:0000740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plastid_sequence","synonyms":[{"name":"plastid sequence","type":"exact"}],"termid":"SO:0000740"}


id: GO:0150004
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the dendritic spine neck where the spine arises from the dendritic shaft.","definition_xrefs":["PMID:9030614","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine neck","termid":"GO:0044326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine origin","termid":"GO:0150004"}


id: PBO:0075762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 2","termid":"PBO:0075762"}


id: GO:1904812
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88652],"is_not":false,"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"Any rRNA acetylation that is involved in maturation of SSU-rRNA.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25402480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA acetylation","termid":"GO:1990882"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"rRNA acetylation involved in maturation of SSU-rRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"rRNA acetylation involved in SSU-rRNA maturation","type":"exact"},{"name":"rRNA acetylation involved in processing of 20S pre-rRNA","type":"narrow"}],"termid":"GO:1904812","terms_by_termid":{"GO:1904812":null}}


id: PBO:0042045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 102A","termid":"PBO:0042045"}


id: PBO:0062711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily I member 1","termid":"PBO:0062711"}


id: PR:Q9USY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16H5.15 gene.","definition_xrefs":["UniProtKB:Q9USY8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16H5.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.15","synonyms":[{"name":"Spom972h-SPBC16H5.15","type":"exact"}],"termid":"PR:Q9USY8"}


id: FYPO:0002171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype observed in the vegetative growth phase of the life cycle in which a cell is able to survive at a low temperature.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable cell at low temperature (obsolete FYPO:0002171)","synonyms":[{"name":"cell viable at low temperature","type":"exact"},{"name":"viable cell at low temperature during mitotic cell cycle","type":"related"},{"name":"viable cell at low temperature during vegetative growth","type":"exact"}],"termid":"FYPO:0002171"}


id: PBO:0017834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siroheme synthase Met8 (predicted)","termid":"PBO:0017834"}


id: GO:0097262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eoxin C4 = eoxin D4 + 5-L-glutamyl amino acid.","definition_xrefs":["GOC:mw","PMID:18184802","PMID:18647347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"eoxin D4 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161945"],"termid":"GO:0097262"}


id: GO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + stipitatonate = CO2 + H+ + stipitatate.","definition_xrefs":["EC:4.1.1.60","RHEA:13885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"stipitatonate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03739","MetaCyc:STIPITATONATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"stipitatonate carboxy-lyase (decyclizing)","type":"related"},{"name":"stipitatonate carboxy-lyase (decyclizing, stipitatate-forming)","type":"related"}],"termid":"GO:0050296"}


id: PBO:0075469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 20","termid":"PBO:0075469"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: PBO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 29","termid":"PBO:0080059"}


id: PBO:0003785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein Lsm3 (predicted)","termid":"PBO:0003785"}


id: PBO:0041151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 6","termid":"PBO:0041151"}


id: PR:Q9P7X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03098","PANTHER:PTHR11851:SF58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.15c","secondary_identifiers":["UniProtKB:Q9P7X1"],"synonyms":[{"name":"PEP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMPCB","type":"exact"},{"name":"beta-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X1"}


id: PBO:0061893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive","termid":"PBO:0061893"}


id: FYECO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2,2'-dipyridyl was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2,2'-dipyridyl","synonyms":[{"name":"2,2'-dipyridyl added","type":"exact"}],"termid":"FYECO:0000409"}


id: GO:0008171
data:
  {"annotated_genes":["SJAG_00559","SJAG_03332","SJAG_02660","SJAG_02817","SJAG_04642","SJAG_03773","SJAG_05016","SJAG_00722","SJAG_01269","SJAG_01375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061542"},{"annotations":[109532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[83919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"},{"annotations":[104037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990276"},{"annotations":[85695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[85696,97369,104382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[105119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090486"},{"annotations":[93891,86993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00559":null,"SJAG_00722":null,"SJAG_01269":null,"SJAG_01375":null,"SJAG_02660":null,"SJAG_02817":null,"SJAG_03332":null,"SJAG_03773":null,"SJAG_04642":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5578717","Reactome:R-HSA-5629203","Reactome:R-HSA-5629237","Reactome:R-HSA-6790907","Reactome:R-HSA-5629218"],"termid":"GO:0008171","terms_by_termid":{"GO:0004671":null,"GO:0008650":null,"GO:0018423":null,"GO:0061542":null,"GO:0070039":null,"GO:0090486":null,"GO:0106050":null,"GO:1990276":null}}


id: FYPO:0007275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal during the meiotic cell cycle. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during meiotic cell cycle","synonyms":[{"name":"abnormal mitochondrial inheritance during meiotic cell cycle","type":"exact"},{"name":"abnormal mitochondrion inheritance during meiosis","type":"related"}],"termid":"FYPO:0007275"}


id: PATO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having the nature or characteristic of, a ligament; composed of the tissue proper to ligaments.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligamentous","termid":"PATO:0002314"}


id: GO:0102663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A34 + 2-oxoglutarate + O2 = H+ + gibberellin A34-catabolite + succinate + carbon dioxide + H2O.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin A34,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-292"],"termid":"GO:0102663"}


id: GO:1902177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie","PMID:11672522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902177"}


id: FYPO:0006817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006817"}


id: PBO:0031792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_cell_cycle_phase","termid":"PBO:0031792"}


id: PBO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GDA1","termid":"PBO:0001129"}


id: GO:2000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaxial/abaxial pattern formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaxial/abaxial pattern formation","synonyms":[{"name":"regulation of adaxial/abaxial pattern specification","type":"related"}],"termid":"GO:2000011"}


id: GO:0019588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process","synonyms":[{"name":"glycerol fermentation","type":"exact"}],"termid":"GO:0019588"}


id: PBO:0064051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 85","termid":"PBO:0064051"}


id: GO:0046236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mandelate metabolic process","termid":"GO:0018924"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mandelate biosynthetic process","synonyms":[{"name":"mandelate anabolism","type":"exact"},{"name":"mandelate biosynthesis","type":"exact"},{"name":"mandelate formation","type":"exact"},{"name":"mandelate synthesis","type":"exact"}],"termid":"GO:0046236"}


id: PBO:0017534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible chromosome segregation protein (predicted)","termid":"PBO:0017534"}


id: PR:P87136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.05 gene.","definition_xrefs":["UniProtKB:P87136","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.05","synonyms":[{"name":"Spom972h-SPAC57A7.05","type":"exact"}],"termid":"PR:P87136"}


id: PBO:0030683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_vegetative_cell","termid":"PBO:0030683"}


id: FYPO:0009060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of wortmannin than normal.","definition_xrefs":["PMID:26891792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to wortmannin","synonyms":[{"name":"resistance to wortmannin during vegetative growth","type":"exact"},{"name":"resistant to wortmannin","type":"exact"}],"termid":"FYPO:0009060"}


id: PBO:0076067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG3 antisense RNA 1","termid":"PBO:0076067"}


id: PBO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 1","termid":"PBO:0047682"}


id: GO:0035034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of histone acetyltransferase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"histone acetyltransferase regulator activity","synonyms":[{"name":"histone acetylase regulator activity","type":"exact"}],"termid":"GO:0035034"}


id: PBO:0027426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_double-strand_break_repair_junction_in_presence_of_persistent_double-strand_breaks","termid":"PBO:0027426"}


id: GO:0048729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tissue are generated and organized.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue morphogenesis","termid":"GO:0048729"}


id: MOD:01556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.205359 Da","termid":"MOD:01591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01556"}


id: PBO:0002977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM (predicted)","termid":"PBO:0002977"}


id: PBO:0028243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_glycosylated_protein_in_cell","termid":"PBO:0028243"}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: GO:0043295
data:
  {"annotated_genes":["SJAG_05181","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93061,95298],"is_not":false,"summary":null,"term":"GO:0043295"}]},"cv_name":"molecular_function","definition":"Binding to glutathione; a tripeptide composed of the three amino acids cysteine, glutamic acid and glycine.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01351":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glutathione binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043295","terms_by_termid":{"GO:0043295":null}}


id: FYPO:0002567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNAs transcribed from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcripts during vegetative growth","type":"exact"},{"name":"normal accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"normal centromeric outer repeat transcript accumulation","type":"related"},{"name":"normal centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"normal level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0002567"}


id: PBO:0063867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class A","termid":"PBO:0063867"}


id: GO:0042865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["GOC:jl","PMID:6794030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"siderophore catabolic process","termid":"GO:0046215"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"pyochelin catabolic process","synonyms":[{"name":"pyochelin breakdown","type":"exact"},{"name":"pyochelin catabolism","type":"exact"},{"name":"pyochelin degradation","type":"exact"}],"termid":"GO:0042865"}


id: PBO:0028461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_septin_ring","termid":"PBO:0028461"}


id: GO:1901159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose 5-phosphate.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose 5-phosphate metabolic process","termid":"GO:0051167"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylulose 5-phosphate biosynthetic process","synonyms":[{"name":"xylulose 5-phosphate anabolism","type":"exact"},{"name":"xylulose 5-phosphate biosynthesis","type":"exact"},{"name":"xylulose 5-phosphate formation","type":"exact"},{"name":"xylulose 5-phosphate synthesis","type":"exact"}],"termid":"GO:1901159"}


id: PBO:0068356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138 pseudogene 1","termid":"PBO:0068356"}


id: PR:O94238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11127:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.13","secondary_identifiers":["UniProtKB:O94238"],"synonyms":[{"name":"SPAC1805.13","type":"related"},{"name":"Spom972h-RPL14","type":"exact"}],"termid":"PR:O94238"}


id: PR:O59746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.11c gene.","definition_xrefs":["UniProtKB:O59746","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.11c","synonyms":[{"name":"Spom972h-SPBC530.11c","type":"exact"}],"termid":"PR:O59746"}


id: PBO:0074213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 2","termid":"PBO:0074213"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: PBO:0031191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_thickness_during_vegetative_growth","termid":"PBO:0031191"}


id: PBO:0085774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER to Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p","termid":"PBO:0085774"}


id: PBO:0011514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamideformyltransferase","termid":"PBO:0011514"}


id: PBO:0065254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20G","termid":"PBO:0065254"}


id: MOD:02006
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with a stearoylsulfanyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"stearoylated residue","termid":"MOD:02001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-stearoylated residue","termid":"MOD:02006"}


id: GO:1902335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive chemotaxis that is involved in neuron migration.","definition_xrefs":["PMID:21658587","GOC:rl","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis involved in neuron migration (obsolete GO:1902335)","synonyms":[{"name":"chemoattraction involved in neuron chemotaxis","type":"exact"},{"name":"chemoattraction involved in neuron guidance","type":"related"},{"name":"chemoattraction involved in neuron migration","type":"exact"},{"name":"chemoattraction involved in neuronal migration","type":"exact"},{"name":"positive chemotaxis involved in neuron chemotaxis","type":"exact"},{"name":"positive chemotaxis involved in neuron guidance","type":"related"},{"name":"positive chemotaxis involved in neuron migration","type":"exact"},{"name":"positive chemotaxis involved in neuronal migration","type":"exact"}],"termid":"GO:1902335"}


id: PBO:0027794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027794"}


id: GO:0031222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["ISBN:0198506732","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinan catabolic process","synonyms":[{"name":"arabinan breakdown","type":"exact"},{"name":"arabinan catabolism","type":"exact"},{"name":"arabinan degradation","type":"exact"}],"termid":"GO:0031222"}


id: PBO:0046316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enkurin domain containing 1","termid":"PBO:0046316"}


id: PBO:0053521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 515","termid":"PBO:0053521"}


id: GO:0036153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of triacylglycerol, through sequential deacylation and re-acylation reactions, to generate triacylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol acyl-chain remodeling","termid":"GO:0036155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride acyl-chain remodeling","synonyms":[{"name":"triacylglycerol acyl-chain remodeling","type":"exact"},{"name":"triglyceride acyl-chain remodelling","type":"exact"}],"termid":"GO:0036153"}


id: PBO:0029564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029564"}


id: PBO:0091329
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPP34 domain-containing protein","termid":"PBO:0091329"}


id: GO:0008202
data:
  {"annotated_genes":["SJAG_04059","SJAG_03715","SJAG_04790","SJAG_00235","SJAG_01307","SJAG_02982","SJAG_00413","SJAG_02291","SJAG_03235","SJAG_03509","SJAG_03598","SJAG_00580","SJAG_04810","SJAG_03249","SJAG_03352","SJAG_04018","SJAG_04124","SJAG_04270","SJAG_04499","SJAG_03531","SJAG_03750","SJAG_01326","SJAG_03349","SJAG_02104","SJAG_00770","SJAG_02044","SJAG_00624","SJAG_03024","SJAG_02855","SJAG_00717","SJAG_00158","SJAG_02068","SJAG_04865","SJAG_03018","SJAG_02719","SJAG_04217","SJAG_01474","SJAG_00261","SJAG_03929","SJAG_00370","SJAG_00453","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96687,97828,113534],"is_not":false,"summary":null,"term":"GO:0008202"},{"annotations":[88639,100278,102516,106082,112560,100695,84548,105478,107812,100464,94872,103531,105239,107310,94078,84769,90682,92631,103844,88586,111237,110905,90493,85725,84805,87537,95615,103710,114765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[84838,114865,100009,99370,111077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[89929],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[105850],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[105851],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[84637,101835,84636],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[97499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016125"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00235":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00580":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01326":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02291":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04124":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Steroid_metabolism"],"synonyms":[{"name":"steroid metabolism","type":"exact"}],"termid":"GO:0008202","terms_by_termid":{"GO:0006696":null,"GO:0008202":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0066547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 10","termid":"PBO:0066547"}


id: PATO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001125 absolute pressure value (obsolete PATO:0001125)","termid":"PATO:0001125"}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: PR:000044504
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein ypt5 (Schizosaccharomyces pombe) that is prenylated with Geranylgeranyl moieties on the Cys residues within the CxC motif. Example: UniProtKB:P36586-1, Cys-209/Cys-211, MOD:00113.","definition_xrefs":["PomBase:MAH","PMID:8226998","PMID:1597466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding protein ypt5 (Schizosaccharomyces pombe)","termid":"PR:000030005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ypt5/Ip(C209,C211)","pombase_gene_id":"SPAC6F6.15","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein ypt5 prenylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SpYPT5p prenylated","type":"related"},{"name":"ypt5/Ip(C209,C211)","type":"exact"}],"termid":"PR:000044504"}


id: PBO:0070324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 13","termid":"PBO:0070324"}


id: PBO:0039438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and EF-hand domain containing 1","termid":"PBO:0039438"}


id: PBO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPP38 divergent transcript","termid":"PBO:0071793"}


id: GO:0090518
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99847],"is_not":false,"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane import into vacuole","termid":"GO:0034490"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transport","termid":"GO:1903826"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-arginine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090458"],"synonyms":[{"name":"arginine transmembrane import into vacuole","type":"broad"},{"name":"vacuolar arginine import","type":"exact"}],"termid":"GO:0090518","terms_by_termid":{"GO:0090518":null}}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: PR:O75002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ran guanine nucleotide release factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05001","PANTHER:PTHR15837:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear import protein mog1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.01c","secondary_identifiers":["UniProtKB:O75002"],"synonyms":[{"name":"Spom972h-RANGRF","type":"exact"}],"termid":"PR:O75002"}


id: GO:0015474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Transports a passenger protein from the periplasm to the external milieu; the passenger protein and the porin are the N- and C-terminal regions of the same protein, respectively.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","TC:1.B.12.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"autotransporter activity","termid":"GO:0015474"}


id: GO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + heparan sulfate = adenosine 3',5'-bisphosphate + heparan sulfate 6-O-sulfate; results in 6-O-sulfation of glucosamine residues in heparan sulfate.","definition_xrefs":["PMID:8631808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate sulfotransferase activity","termid":"GO:0034483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2076419"],"synonyms":[{"name":"heparan sulphate 6-O-sulphotransferase activity","type":"exact"},{"name":"heparin 6-O-sulfotransferase activity","type":"related"}],"termid":"GO:0017095"}


id: PBO:0030599
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_vacuole","termid":"PBO:0030599"}


id: GO:0040034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which an integrated living unit or organism progresses from an initial condition to a later condition and the rate at which this time point is reached.","definition_xrefs":["PMID:9442909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of development, heterochronic","synonyms":[{"name":"developmental timing","type":"related"},{"name":"heterochronic regulation of development","type":"exact"},{"name":"temporal regulation of development","type":"exact"}],"termid":"GO:0040034"}


id: PATO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a shape not quite ovoid. approximately ovoid.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/subovoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subovoid","termid":"PATO:0002537"}


id: PBO:0068380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 181","termid":"PBO:0068380"}


id: GO:0031059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deacetylation at centromere (obsolete GO:0031059)","termid":"GO:0031059"}


id: GO:0010927
data:
  {"annotated_genes":["SJAG_01894","SJAG_00514","SJAG_02248","SJAG_00974","SJAG_01993","SJAG_04271","SJAG_03915","SJAG_02379","SJAG_04470","SJAG_03688","SJAG_04275","SJAG_04868","SJAG_00114","SJAG_02989","SJAG_02864","SJAG_04781","SJAG_00486","SJAG_04922","SJAG_03453","SJAG_03746","SJAG_01321","SJAG_01943","SJAG_01769","SJAG_04615","SJAG_02736","SJAG_04509","SJAG_03013","SJAG_00405","SJAG_04483","SJAG_00971","SJAG_03536","SJAG_02241","SJAG_03250","SJAG_02169","SJAG_02700","SJAG_04080","SJAG_01794","SJAG_00663","SJAG_00826","SJAG_05309","SJAG_02320","SJAG_04010","SJAG_00821","SJAG_04238","SJAG_02529","SJAG_04901","SJAG_01483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113777,84286,86307,87815,84776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[105299,100966,93623,106114,87545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[109943,95853,115004,87337,114527,112942,106115,93624,95852,114821,95922,94849,103384,97730,93583,91415,101284],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[102827,93584,109944,88335,98933,95855,95854,92911,103720,100141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[94920,84332,110327,95001,88553,94325],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[86784],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[107369,86901,83971,85934,89519],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[96140,95857,102007,95856,111973,90555],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular component assembly that is part of the initial shaping of the component during its developmental progression.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cellular anatomical entity morphogenesis","termid":"GO:0032989"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellular component assembly involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010927","terms_by_termid":{"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null,"GO:1902917":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0072894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C4-methyl oxidase pseudogene","termid":"PBO:0072894"}


id: PBO:0090025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Nfu1","termid":"PBO:0090025"}


id: PBO:0041699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 5","termid":"PBO:0041699"}


id: SO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SNVs are single nucleotide positions in genomic DNA at which different sequence alternatives exist.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNV","synonyms":[{"name":"single nucleotide variant","type":"exact"}],"termid":"SO:0001483"}


id: PBO:0109650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked (pseudogene)","termid":"PBO:0109650"}


id: FYPO:0001970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing aculeacin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on aculeacin A","termid":"FYPO:0001970"}


id: FYPO:0004134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to diethyl maleate","synonyms":[{"name":"decreased RNA accumulation during cellular response to diethyl maleate","type":"related"},{"name":"decreased RNA level during cellular response to DEM","type":"exact"},{"name":"decreased RNA level during cellular response to diethyl maleate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to diethyl maleate during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to diethyl maleate","type":"narrow"},{"name":"decreased transcript level during cellular response to diethyl maleate","type":"exact"},{"name":"reduced RNA level during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0004134"}


id: PBO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member B","termid":"PBO:0047160"}


id: GO:0000303
data:
  {"annotated_genes":["SJAG_01734","SJAG_03303","SJAG_05181","SJAG_03653","SJAG_04399","SJAG_04403","SJAG_04788","SJAG_04632","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85469,67551,64544,96180,89174,106134,58036,106091,95297,85051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen radical","termid":"GO:0000305"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to superoxide","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0000303","terms_by_termid":{"GO:0019430":null}}


id: PBO:0043399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 2","termid":"PBO:0043399"}


id: PBO:0062471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 162 pseudogene","termid":"PBO:0062471"}


id: PBO:0004073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein Bzz1 (predicted)","termid":"PBO:0004073"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["GOC:go_curators","ISBN:0123668387"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: PBO:0068603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 54, pseudogene","termid":"PBO:0068603"}


id: PBO:0059274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 3","termid":"PBO:0059274"}


id: PBO:0066421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 associated Eps domain containing 1","termid":"PBO:0066421"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of tyramine to form octopamine.","definition_xrefs":["PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","termid":"GO:0004836"}


id: PBO:0029124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_saccharopine_dehydrogenase_activity","termid":"PBO:0029124"}


id: GO:0005922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction.","definition_xrefs":["PMID:11146276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"gap junction","termid":"GO:0005921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"connexin complex","secondary_identifiers":["NIF_Subcellular:sao445019788"],"synonyms":[{"name":"connexon","type":"exact"},{"name":"connexon complex","type":"related"}],"termid":"GO:0005922"}


id: PBO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_camptothecin","termid":"PBO:0031345"}


id: GO:1902252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["PMID:14569084","GOC:rl","GOC:BHF","GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"positively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte apoptotic process","synonyms":[{"name":"activation of RBC apoptosis","type":"narrow"},{"name":"activation of RBC apoptotic process","type":"narrow"},{"name":"activation of erythrocyte apoptosis","type":"narrow"},{"name":"activation of erythrocyte apoptotic process","type":"narrow"},{"name":"activation of red blood cell apoptosis","type":"narrow"},{"name":"activation of red blood cell apoptotic process","type":"narrow"},{"name":"positive regulation of RBC apoptosis","type":"narrow"},{"name":"positive regulation of RBC apoptotic process","type":"exact"},{"name":"positive regulation of erythrocyte apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptosis","type":"narrow"},{"name":"positive regulation of red blood cell apoptotic process","type":"exact"},{"name":"up regulation of RBC apoptosis","type":"narrow"},{"name":"up regulation of RBC apoptotic process","type":"exact"},{"name":"up regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up regulation of red blood cell apoptosis","type":"narrow"},{"name":"up regulation of red blood cell apoptotic process","type":"exact"},{"name":"up-regulation of RBC apoptosis","type":"narrow"},{"name":"up-regulation of RBC apoptotic process","type":"exact"},{"name":"up-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"up-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"up-regulation of red blood cell apoptosis","type":"narrow"},{"name":"up-regulation of red blood cell apoptotic process","type":"exact"},{"name":"upregulation of RBC apoptosis","type":"narrow"},{"name":"upregulation of RBC apoptotic process","type":"exact"},{"name":"upregulation of erythrocyte apoptosis","type":"narrow"},{"name":"upregulation of erythrocyte apoptotic process","type":"exact"},{"name":"upregulation of red blood cell apoptosis","type":"narrow"},{"name":"upregulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902252"}


id: PBO:0040251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 7","termid":"PBO:0040251"}


id: PBO:0071761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 8","termid":"PBO:0071761"}


id: PBO:0080150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventral anterior homeobox 2","termid":"PBO:0080150"}


id: GO:0034768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (E)-beta-ocimene + diphosphate.","definition_xrefs":["PMID:12624761","EC:4.2.3.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(E)-beta-ocimene synthase activity","secondary_identifiers":["RHEA:32691","MetaCyc:RXN-5109"],"termid":"GO:0034768"}


id: GO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self-propelled movement of a mesendodermal cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lamellipodium assembly involved in mesendodermal cell migration","termid":"GO:0003364"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionary_variant_of","termid":"PBO:0034352"}


id: GO:0016107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquiterpenoid catabolic process","synonyms":[{"name":"sesquiterpenoid breakdown","type":"exact"},{"name":"sesquiterpenoid catabolism","type":"exact"},{"name":"sesquiterpenoid degradation","type":"exact"}],"termid":"GO:0016107"}


id: GO:0150072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arginase activity.","definition_xrefs":["GOC:bc","PMID:26670206","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of arginase activity","termid":"GO:0150070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of arginase activity","termid":"GO:0150072"}


id: GO:0102516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-feruloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102516)","termid":"GO:0102516"}


id: PR:O94421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf22 gene.","definition_xrefs":["UniProtKB:O94421","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.14c","synonyms":[{"name":"ATP-dependent helicase snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf22","type":"exact"}],"termid":"PR:O94421"}


id: PBO:0069773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1056, pseudogene","termid":"PBO:0069773"}


id: GO:0140131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte chemotaxis.","definition_xrefs":["PMID:19255442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte migration","termid":"GO:2000403"},{"relation_name":"positively_regulates","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"}


id: PBO:0072827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM domain, SH3 domain and nuclear localization signals 1","termid":"PBO:0072827"}


id: PR:Q9UTG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.15c","synonyms":[{"name":"Spom972h-pub2","type":"exact"}],"termid":"PR:Q9UTG2"}


id: GO:1904192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte apoptotic process","synonyms":[{"name":"regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904192"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","PMID:12626695","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: PBO:0113531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); involved in potassium homeostasis and salt tolerance; localizes to sites of contact between vacuole and mitochondria (vCLAMPs); targeted to vacuole via AP-3 pathway; similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0113531"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PBO:0079140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 3","termid":"PBO:0079140"}


id: GO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inward rectifier channel (obsolete GO:0005241)","synonyms":[{"name":"inward rectifier channel","type":"exact"}],"termid":"GO:0005241"}


id: PBO:0054635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2040","termid":"PBO:0054635"}


id: GO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-N6,N6,N6-trimethyl-L-lysine to form peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N6,N6,N6-trimethyl-lysine hydroxylation to peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine","synonyms":[{"name":"peptidyl trimethyl lysine hydroxylase activity","type":"exact"},{"name":"peptidyl-trimethyl-lysine hydroxylase activity","type":"exact"}],"termid":"GO:0050841"}


id: GO:0140814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine betaine(out) + Na+(out) + Cl-(out)= glycine betaine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:10358010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine transmembrane transporter activity","termid":"GO:0015199"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycine betaine:sodium:chloride symporter activity","secondary_identifiers":["RHEA:71175"],"synonyms":[{"name":"sodium/chloride-dependent glycine betaine transporter activity","type":"broad"}],"termid":"GO:0140814"}


id: PBO:0088959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","termid":"PBO:0088959"}


id: PBO:0065936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 2","termid":"PBO:0065936"}


id: GO:1901508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acylglycerol transport.","definition_xrefs":["GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of acylglycerol transport","termid":"GO:1901506"},{"relation_name":"positively_regulates","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of acylglycerol transport","synonyms":[{"name":"activation of acylglycerol transport","type":"narrow"},{"name":"activation of glyceride transport","type":"narrow"},{"name":"positive regulation of glyceride transport","type":"exact"},{"name":"up regulation of acylglycerol transport","type":"exact"},{"name":"up regulation of glyceride transport","type":"exact"},{"name":"up-regulation of acylglycerol transport","type":"exact"},{"name":"up-regulation of glyceride transport","type":"exact"},{"name":"upregulation of acylglycerol transport","type":"exact"},{"name":"upregulation of glyceride transport","type":"exact"}],"termid":"GO:1901508"}


id: GO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial axis specification","synonyms":[{"name":"adaxial/abaxial determination","type":"related"}],"termid":"GO:0009943"}


id: PBO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein, human apoptosis-inducing factor ortholog (predicted)","termid":"PBO:0016569"}


id: PBO:0072900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR-related CTD associated factor 11","termid":"PBO:0072900"}


id: GO:0039023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric duct are generated and organized. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the kidney.","definition_xrefs":["XAO:0000063","ZFA:0000150","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"pronephric duct development","termid":"GO:0039022"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct morphogenesis","termid":"GO:0039023"}


id: FYPO:0002656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased actin filament binding","synonyms":[{"name":"decreased F-actin binding","type":"exact"},{"name":"decreased filamentous actin binding","type":"related"},{"name":"decreased protein-protein interaction with actin filament","type":"exact"},{"name":"reduced actin filament binding","type":"exact"}],"termid":"FYPO:0002656"}


id: GO:0015961
data:
  {"annotated_genes":["SJAG_04169","SJAG_04939","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[113096,107452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine polyphosphate, a derivative of the nucleoside adenosine with phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04870":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"diadenosine polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine polyphosphate breakdown","type":"exact"},{"name":"diadenosine polyphosphate catabolism","type":"exact"},{"name":"diadenosine polyphosphate degradation","type":"exact"}],"termid":"GO:0015961","terms_by_termid":{"GO:0015964":null,"GO:1901907":null,"GO:1901909":null}}


id: PBO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 2","termid":"PBO:0070732"}


id: PBO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar carboxypeptidase","termid":"PBO:0090228"}


id: PBO:0040361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit k","termid":"PBO:0040361"}


id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: PBO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 23","termid":"PBO:0070350"}


id: _global:has_component_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"w 'has process component' p if p and w are processes,  w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component","termid":"_global:has_component"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_process","secondary_identifiers":["RO:0002018"],"termid":"_global:has_component_process"}


id: PBO:0002975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WW domain binding protein-2 ortholog","termid":"PBO:0002975"}


id: GO:2000185
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95418],"is_not":false,"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate transport","termid":"GO:0010966"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of phosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000185","terms_by_termid":{"GO:2000185":null}}


id: GO:0010745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage derived foam cell differentiation","termid":"GO:0010745"}


id: GO:0033420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"CUG codon-amino acid adaptor activity","synonyms":[{"name":"CTG codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033420"}


id: PBO:0090769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip4","termid":"PBO:0090769"}


id: PBO:0029456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_leucine_import","termid":"PBO:0029456"}


id: PBO:0084840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL10 and YmL18) on two-dimensional SDS gels","termid":"PBO:0084840"}


id: PBO:0085443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication","termid":"PBO:0085443"}


id: PBO:0064468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 2","termid":"PBO:0064468"}


id: FYPO:0004992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during interphase of the meiotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiotic cell cycle","termid":"FYPO:0004991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during meiotic interphase","synonyms":[{"name":"decreased protein accumulation during meiotic interphase","type":"related"},{"name":"decreased protein level during interphase of meiotic cell cycle","type":"exact"},{"name":"reduced protein level during meiotic interphase","type":"exact"}],"termid":"FYPO:0004992"}


id: PBO:0058081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4299","termid":"PBO:0058081"}


id: FYPO:0001172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to form a 2,2,7-trimethylguanosine cap structure is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 7-methylguanosine cap hypermethylation","synonyms":[{"name":"abnormal 2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"abnormal 7-methylguanosine cap hypermethylation during mitotic cell cycle","type":"related"},{"name":"abnormal 7-methylguanosine cap hypermethylation during vegetative growth","type":"exact"},{"name":"abnormal TMG cap formation","type":"exact"},{"name":"abnormal conversion of m(7)G to m(3)G","type":"exact"},{"name":"abnormal snRNA capping","type":"narrow"},{"name":"abnormal snoRNA capping","type":"narrow"}],"termid":"FYPO:0001172"}


id: FYPO:0007116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein in the actomyosin contractile ring is lower than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:23615450","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0004803","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level in actomyosin contractile ring during mitotic interphase","synonyms":[{"name":"decreased protein level in actomyosin contractile ring during interphase during vegetative growth","type":"exact"},{"name":"decreased protein level in actomyosin contractile ring during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level in contractile ring during mitotic interphase","type":"exact"},{"name":"reduced protein level in actomyosin contractile ring during mitotic interphase","type":"exact"}],"termid":"FYPO:0007116"}


id: PATO:0002066
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A solid configuration inhering in a material entity by virtue of its constituent atoms, molecules, or ions being arranged in an orderly repeating pattern extending in all three spatial dimensions.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Crystal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solid configuration","termid":"PATO:0001736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal configuration","termid":"PATO:0002066"}


id: PBO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 74","termid":"PBO:0050371"}


id: PBO:0038358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-over-expressed_in","termid":"PBO:0038358"}


id: PBO:0068982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 226, pseudogene","termid":"PBO:0068982"}


id: PBO:0058169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4464","termid":"PBO:0058169"}


id: PBO:0047483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 10","termid":"PBO:0047483"}


id: GO:0097578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of binding or confining copper ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:mr","PMID:3099306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular copper ion homeostasis","termid":"GO:0006878"},{"relation_name":"is_a","term_name":"sequestering of metal ion","termid":"GO:0051238"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"sequestering of copper ion","synonyms":[{"name":"copper ion retention","type":"exact"},{"name":"copper ion sequestering","type":"exact"},{"name":"copper ion sequestration","type":"exact"},{"name":"copper ion storage","type":"exact"},{"name":"retention of copper ion","type":"exact"},{"name":"sequestration of copper ion","type":"exact"},{"name":"storage of copper ion","type":"exact"}],"termid":"GO:0097578"}


id: PBO:0066797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 96","termid":"PBO:0066797"}


id: PBO:0087456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi mannosyltransferase complex; this complex also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p, and mediates elongation of the polysaccharide mannan backbone; has homology to Mnn10p","termid":"PBO:0087456"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: GO:0017163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity that prevents or downregulates basal transcription. Basal transcription results from transcription that is controlled by the minimal complement of proteins necessary to reconstitute transcription from a minimal promoter.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete basal transcription repressor activity (obsolete GO:0017163)","synonyms":[{"name":"basal transcription repressor activity","type":"exact"}],"termid":"GO:0017163"}


id: GO:0106035
data:
  {"annotated_genes":["SJAG_02866","SJAG_01147","SJAG_03532","SJAG_04016","SJAG_03913","SJAG_02497","SJAG_02745","SJAG_00040","SJAG_02895","SJAG_03222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83722,85037,91693,96056,100283,100764,105863,110767,112120,113024],"is_not":false,"summary":null,"term":"GO:0106035"}]},"cv_name":"biological_process","definition":"The transfer of an assembled 4Fe-4S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation by iron-sulfur cluster transfer","termid":"GO:0097428"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_01147":null,"SJAG_02497":null,"SJAG_02745":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03913":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"protein maturation by [4Fe-4S] cluster transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106035","terms_by_termid":{"GO:0106035":null}}


id: GO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by cytosolic resident proteases during antigen processing and presentation.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis by cytosolic proteases associated with antigen processing and presentation","termid":"GO:0002203"}


id: GO:0120142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"positively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"positive regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120142"}


id: GO:1901279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose 5-phosphate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-ribose 5-phosphate metabolic process","termid":"GO:1901278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate catabolic process","synonyms":[{"name":"D-ribose 5-phosphate breakdown","type":"exact"},{"name":"D-ribose 5-phosphate catabolism","type":"exact"},{"name":"D-ribose 5-phosphate degradation","type":"exact"}],"termid":"GO:1901279"}


id: PBO:0081474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 347","termid":"PBO:0081474"}


id: PBO:0066655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3","termid":"PBO:0066655"}


id: PBO:0048391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS1 adjacent regulatory RNA","termid":"PBO:0048391"}


id: PBO:0035915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0035915"}


id: PBO:0090462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta subunit","termid":"PBO:0090462"}


id: PBO:0011501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific BAR domain protein Meu14","termid":"PBO:0011501"}


id: GO:0021770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the parahippocampal gyrus over time from its initial formation until its mature state. The parahippocampal gyrus is a ridge in the cerebral cortex.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","ISBN:0878937420","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parahippocampal gyrus development","secondary_identifiers":["Wikipedia:parahippocampal_gyrus"],"synonyms":[{"name":"hippocampal gyrus development","type":"exact"}],"termid":"GO:0021770"}


id: PBO:0041514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 39","termid":"PBO:0041514"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: PBO:0056808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD4A antisense RNA 1","termid":"PBO:0056808"}


id: FYPO:0007457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more nuclear envelope than normal during interphase of the mitotic cell cycle. Excess nuclear envelopes may take the form of intranuclear membrane stacks or invaginations, or small cytoplasmic spheres that are attached to the nucleus, have double lipid bilayer membranes, and may contain structures resembling nuclear pores.","definition_xrefs":["PMID:32848252","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excess nuclear envelope present","termid":"FYPO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"excess nuclear envelope present during mitotic interphase","synonyms":[{"name":"excess nuclear envelope present during interphase of mitotic cell cycle","type":"exact"},{"name":"excess nuclear envelope present during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007457"}


id: PBO:0040481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2 like","termid":"PBO:0040481"}


id: PR:Q10299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA cleavage complex II protein Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12755:SF0","OMA:SCHPO00989","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation factor clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.05c","secondary_identifiers":["UniProtKB:Q10299"],"synonyms":[{"name":"Spom972h-CLP1","type":"exact"}],"termid":"PR:Q10299"}


id: PBO:0088146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs)","termid":"PBO:0088146"}


id: PBO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 4","termid":"PBO:0050677"}


id: PBO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double-strand-specific ribonuclease Pac1","termid":"PBO:0003316"}


id: PBO:0074073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 47 pseudogene 1","termid":"PBO:0074073"}


id: GO:1905642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA methylation.","definition_xrefs":["PMID:27336847","GOC:TermGenie","GOC:bc","GO_REF:0000058","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA methylation (obsolete GO:1905642)","synonyms":[{"name":"down regulation of DNA methylation","type":"exact"},{"name":"down-regulation of DNA methylation","type":"exact"},{"name":"downregulation of DNA methylation","type":"exact"},{"name":"inhibition of DNA methylation","type":"narrow"}],"termid":"GO:1905642"}


id: FYPO:0002180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which cells in the population are viable, some cells are longer than normal, and the rest of the cells are of normal morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:mah","PomBase:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete viable mixed vegetative cell population including cell with normal morphology and long cells (obsolete FYPO:0002180)","synonyms":[{"name":"long low penetrance","type":"related"}],"termid":"FYPO:0002180"}


id: GO:0006362
data:
  {"annotated_genes":["SJAG_01128","SJAG_00731","SJAG_01765","SJAG_02653","SJAG_02871","SJAG_03578","SJAG_01698","SJAG_02070","SJAG_01948","SJAG_01444","SJAG_03956","SJAG_01313","SJAG_02101","SJAG_01562","SJAG_03144","SJAG_04261","SJAG_00139","SJAG_04106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83759,83760,85623,86440,88077,89957,91257,91788,98697,99355,100875,101790,105779,106685,109147,109522,109523,109810,110220,111525],"is_not":false,"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase I specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase I.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"nucleolar large rRNA transcription by RNA polymerase I","termid":"GO:0042790"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase I","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001183"],"synonyms":[{"name":"RNA elongation from Pol I promoter","type":"exact"},{"name":"RNA polymerase I transcription elongation factor activity","type":"related"},{"name":"transcription elongation from RNA polymerase I promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0006362","terms_by_termid":{"GO:0006362":null}}


id: PBO:0028578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation","termid":"PBO:0028578"}


id: PBO:0076004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal interaction molecule 2","termid":"PBO:0076004"}


id: PBO:0003136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter (predicted)","termid":"PBO:0003136"}


id: PBO:0079556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 9","termid":"PBO:0079556"}


id: PBO:0073722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAIN motif family member 2","termid":"PBO:0073722"}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0044444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 22","termid":"PBO:0044444"}


id: PBO:0109195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRR1 family protein, DNA-repair associated protein, Srr1","termid":"PBO:0109195"}


id: PBO:0065232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13","termid":"PBO:0065232"}


id: PBO:0064348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin B2","termid":"PBO:0064348"}


id: FYPO:0003354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains a lower amount of galactose residues than normal. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:8782411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0003290","FYPO:0002494"],"is_obsolete":false,"name":"decreased galactose level in glycoprotein glycan","synonyms":[{"name":"decreased galactose level in glycoprotein oligosaccharide","type":"related"},{"name":"decreased level of alpha 1,2-linked galactose residues in glycoprotein glycan","type":"exact"},{"name":"decreased protein glycan galactosylation","type":"related"},{"name":"reduced galactose level in glycoprotein glycan","type":"exact"}],"termid":"FYPO:0003354"}


id: GO:0035290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk segmentation","termid":"GO:0035290"}


id: PBO:0049017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6B pseudogene 2","termid":"PBO:0049017"}


id: PBO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam11","termid":"PBO:0017041"}


id: PBO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Dph1","termid":"PBO:0002017"}


id: RO:HOM0000014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves complex structures from which only a fraction of the elements that can be isolated are separately homologous.","definition_xrefs":["ISBN:978-0471984931","ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_partial_homology_relationship_with","synonyms":[{"name":"fractional homology","type":"exact"},{"name":"mixed homology","type":"related"},{"name":"modular homology","type":"related"},{"name":"partial correspondence","type":"related"},{"name":"partial homologous to","type":"exact"},{"name":"percent homology","type":"related"},{"name":"segmental homology","type":"exact"}],"termid":"RO:HOM0000014"}


id: PBO:0047943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(15)(q22)","termid":"PBO:0047943"}


id: PR:Q09731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bun107 gene.","definition_xrefs":["UniProtKB:Q09731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBP9-binding protein bun107 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.14","synonyms":[{"name":"Spom972h-bun107","type":"exact"},{"name":"binding ubp9 protein of 107 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09731"}


id: GO:0070201
data:
  {"annotated_genes":["SJAG_04343","SJAG_01311","SJAG_03453","SJAG_01245","SJAG_03048","SJAG_04509","SJAG_00906","SJAG_04312","SJAG_01805","SJAG_03970","SJAG_02592","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[101807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[104731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[89852,97870,96464,107015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86903,90422,98405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[88061,83978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of establishment of protein localisation","type":"exact"}],"termid":"GO:0070201","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0070863":null}}


id: GO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of locomotion involved in locomotory behavior","termid":"GO:0090325"},{"relation_name":"positively_regulates","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion involved in locomotory behavior","termid":"GO:0090326"}


id: PBO:0085486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processivity factor; required for the ubiquitination activity of the anaphase promoting complex (APC), mediates the activity of the APC by contributing to substrate recognition; involved in cyclin proteolysis; contains a conserved DOC1 homology domain","termid":"PBO:0085486"}


id: PBO:0042202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2","termid":"PBO:0042202"}


id: GO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: rhamnose(out) + H+(out) = rhamnose(in) + H+(in).","definition_xrefs":["TC:2.A.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"rhamnose transmembrane transporter activity","termid":"GO:0015153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"rhamnose:proton symporter activity","synonyms":[{"name":"rhamnose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015561"}


id: GO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological process in which the brain senses excessive caloric intake.","definition_xrefs":["PMID:12161655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of dietary excess","termid":"GO:0002022"}


id: PBO:0056280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2B member 2","termid":"PBO:0056280"}


id: PBO:0039050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with FG repeats 2","termid":"PBO:0039050"}


id: PBO:0075492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 2, pseudogene","termid":"PBO:0075492"}


id: GO:0061097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}


id: GO:0052807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aflatoxin + 1,5-dihydrocoenzyme F420 = aflatoxin with reduced furanocoumarin moiety + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aflatoxin reductase (coenzyme F420) activity","synonyms":[{"name":"aflatoxin:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"aflatoxin:reduced coenzyme F420 reductase activity","type":"exact"},{"name":"coenzyme F420-aflatoxin reductase activity","type":"exact"},{"name":"coenzyme F420-dependent aflatoxin reductase activity","type":"exact"}],"termid":"GO:0052807"}


id: GO:0009707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"chloroplast membrane","termid":"GO:0031969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast outer membrane","synonyms":[{"name":"chloroplast outer envelope","type":"exact"}],"termid":"GO:0009707"}


id: PBO:0067256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 330, pseudogene","termid":"PBO:0067256"}


id: PBO:0086790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; transcribed during sporulation; null mutant exhibits increased resistance to rapamycin","termid":"PBO:0086790"}


id: GO:0098669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a preexisting viral infection prevents a secondary infection with the same or a closely related virus. Typically some aspect of viral entry is inhibited, but post entry mechanisms have also been documented.","definition_xrefs":["PMID:11985726","PMID:24089557","PMID:8012757","VZ:3971","PMID:23692331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superinfection exclusion","termid":"GO:0098669"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: PBO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding SET domain protein 3","termid":"PBO:0061520"}


id: PBO:0085179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of several homologs of bacterial chaperone DnaJ; located in the ER lumen where it cooperates with Kar2p to mediate maturation of proteins","termid":"PBO:0085179"}


id: PBO:0076544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine aminotransferase","termid":"PBO:0076544"}


id: GO:0006623
data:
  {"annotated_genes":["SJAG_00380","SJAG_01488","SJAG_00181","SJAG_03976","SJAG_00108","SJAG_00204","SJAG_01981","SJAG_03385","SJAG_03970","SJAG_16459","SJAG_00208","SJAG_03250","SJAG_01229","SJAG_01088","SJAG_05210","SJAG_01281","SJAG_01360","SJAG_04552"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84977,86240,88162,93438,97145,98153,100058,100078,102737],"is_not":false,"summary":null,"term":"GO:0006623"},{"annotations":[84163,101750,87115,84086,87546,109316,110451,84198,87681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole, usually using signals contained within the protein.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01488":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04552":null,"SJAG_05210":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein targeting to vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein vacuolar targeting","type":"exact"},{"name":"protein-vacuolar targeting","type":"exact"},{"name":"protein-vacuole targeting","type":"exact"},{"name":"vacuolar protein sorting","type":"exact"}],"termid":"GO:0006623","terms_by_termid":{"GO:0006623":null,"GO:0120113":null}}


id: PBO:0085048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p","termid":"PBO:0085048"}


id: GO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.","definition_xrefs":["ISBN:0395825172","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"},{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic limb morphogenesis","termid":"GO:0030326"}


id: PBO:0059783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 9","termid":"PBO:0059783"}


id: GO:0035675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuromast hair cell over time, from its formation to the mature structure. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["CL:0000856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell development","termid":"GO:0035675"}


id: SO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ref_miRNA (RefSeq-miRNA) sequence is assigned at the creation of a new mature miRNA entry in a database. The ref_miRNA sequence designation remains unchanged even if a different isomiR is later shown to be expressed at a higher level. A ref_miRNA can be produced by one or multiple pre-miRNA.","definition_xrefs":["PMID:26453491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA","termid":"SO:0000276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ref_miRNA","synonyms":[{"name":"RefSeq miRNA","type":"exact"},{"name":"RefSeq-miRNA","type":"exact"},{"name":"ref miRNA","type":"exact"}],"termid":"SO:0002166"}


id: PBO:0028337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028337"}


id: SO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genome is the sum of genetic material within a cell or virion.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"has_part","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome"],"termid":"SO:0001026"}


id: PBO:0065210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog B","termid":"PBO:0065210"}


id: PBO:0088672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein","termid":"PBO:0088672"}


id: PBO:0082744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Ldb7p, and Htl1p to form a module important for a broad range of RSC functions","termid":"PBO:0082744"}


id: PBO:0067335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 428, pseudogene","termid":"PBO:0067335"}


id: PBO:0002150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc complex subunit Noc2 family (predicted)","termid":"PBO:0002150"}


id: GO:0050018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-amino acid + H2O + NAD+ = a 2-oxo acid + NH3 + NADH.","definition_xrefs":["EC:1.4.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-amino-acid dehydrogenase activity","secondary_identifiers":["MetaCyc:L-AMINO-ACID-DEHYDROGENASE-RXN","RHEA:10396"],"synonyms":[{"name":"L-amino-acid:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050018"}


id: GO:0140870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of RNA polymerase.","definition_xrefs":["PMID:31048766","PMID:15300239","PMID:18313387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0003674","GO:0098772","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}


id: PBO:0055284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2711","termid":"PBO:0055284"}


id: GO:1990531
data:
  {"annotated_genes":["SJAG_01731","SJAG_03050","SJAG_02516","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90471,93964,98355,101073],"is_not":false,"summary":null,"term":"GO:1990531"}]},"cv_name":"cellular_component","definition":"A protein complex that functions as a phospholipid-translocating P-Type ATPase.","definition_xrefs":["GOC:rb","GOC:dph","PMID:15090616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02516":null,"SJAG_02897":null,"SJAG_03050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phospholipid-translocating ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"APLT complex","type":"exact"},{"name":"CDC50-DRS2 complex","type":"narrow"},{"name":"CRF1-DNF3 complex","type":"narrow"},{"name":"DNF3-CRF1 complex","type":"narrow"},{"name":"DRS2-CDC50 complex","type":"narrow"},{"name":"Dnf1-Lem3 complex","type":"narrow"},{"name":"Dnf2-Lem3 complex","type":"narrow"},{"name":"Lem3-Dnf1 complex","type":"narrow"},{"name":"Lem3p-Dnf1p complex","type":"narrow"},{"name":"P4-ATPase complex","type":"exact"},{"name":"aminophospholipid translocase complex","type":"exact"},{"name":"phospholipid flippase complex","type":"exact"}],"termid":"GO:1990531","terms_by_termid":{"GO:1990531":null}}


id: GO:0070850
data:
  {"annotated_genes":["SJAG_03540","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96402,114651],"is_not":false,"summary":null,"term":"GO:0070850"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transforming acidic coiled coil (TACC) protein and the TOG protein (Mia1p/Alp7p and Alp14, respectively, in fission yeast), and is involved in microtubule array remodeling as cells progress through the cell cycle. The TACC/TOG complex is conserved in eukaryotes, associates with microtubules, and shuttles between the nucleus and the cytoplasm during interphase.","definition_xrefs":["PMID:19606211","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02761":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TACC/TOG complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070850","terms_by_termid":{"GO:0070850":null}}


id: GO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GPI anchor binding","synonyms":[{"name":"glycosylphosphatidylinositol binding","type":"exact"}],"termid":"GO:0034235"}


id: PBO:0067415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 526, pseudogene","termid":"PBO:0067415"}


id: FYPO:0001383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA content","termid":"FYPO:0001383"}


id: PBO:0057968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3689a","termid":"PBO:0057968"}


id: PBO:0011416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_using","termid":"PBO:0011416"}


id: PR:Q09729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rod1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin domain-containing protein C31A2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.12","synonyms":[{"name":"Spom972h-rod1","type":"exact"}],"termid":"PR:Q09729"}


id: GO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cytosine.","definition_xrefs":["GOC:hjd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cytosine binding","termid":"GO:0002056"}


id: GO:0018889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["UM-BBD_pathwayID:ppc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide metabolic process","synonyms":[{"name":"2-chloro-N-isopropylacetanilide metabolism","type":"exact"},{"name":"propachlor metabolic process","type":"exact"},{"name":"propachlor metabolism","type":"exact"}],"termid":"GO:0018889"}


id: PR:Q9UTD4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.05","secondary_identifiers":["UniProtKB:Q9UTD4"],"synonyms":[{"name":"Spom972h-PFDN4","type":"exact"}],"termid":"PR:Q9UTD4"}


id: PBO:0058400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4771-2","termid":"PBO:0058400"}


id: PBO:0083493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YIP3/YNL044W","termid":"PBO:0083493"}


id: PBO:0066306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region like","termid":"PBO:0066306"}


id: PBO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-4","termid":"PBO:0051200"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: PBO:0086045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in prospore membrane assembly; involved in the assembly of the prospore membrane during sporulation; interacts with Spo14p","termid":"PBO:0086045"}


id: PBO:0074483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET and MYND domain containing 2","termid":"PBO:0074483"}


id: GO:0050189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoenolpyruvate = phosphate + pyruvate.","definition_xrefs":["RHEA:19997","EC:3.1.3.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate phosphatase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-PHOSPHATASE-RXN","KEGG_REACTION:R00208"],"synonyms":[{"name":"PEP phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate phosphohydrolase activity","type":"related"}],"termid":"GO:0050189"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: PBO:0054343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1736","termid":"PBO:0054343"}


id: PBO:0070030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1327, pseudogene","termid":"PBO:0070030"}


id: PBO:0079188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 17, pseudogene","termid":"PBO:0079188"}


id: GO:0060730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of intestinal epithelial structure maintenance, a tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"intestinal epithelial structure maintenance","termid":"GO:0060729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal epithelial structure maintenance","termid":"GO:0060730"}


id: PBO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 4","termid":"PBO:0003013"}


id: PBO:0059133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 10","termid":"PBO:0059133"}


id: SO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAAT, bound by a protein complex that represses transcription in response to low iron levels.","definition_xrefs":["PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT_motif","synonyms":[{"name":"CCAAT motif","type":"exact"}],"termid":"SO:0001856"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: GO:1903601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thermospermine.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:24906355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine metabolic process","synonyms":[{"name":"thermospermine metabolism","type":"exact"}],"termid":"GO:1903601"}


id: PBO:0067904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 206","termid":"PBO:0067904"}


id: PBO:0067330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 422, pseudogene","termid":"PBO:0067330"}


id: PBO:0005685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein (predicted)","termid":"PBO:0005685"}


id: PBO:0088161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of the vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane","termid":"PBO:0088161"}


id: GO:0071606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 4 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"CCL4 production","type":"exact"},{"name":"MIP-1b production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071606"}


id: PBO:0027128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_late_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027128"}


id: GO:0043138
data:
  {"annotated_genes":["SJAG_04372","SJAG_02294","SJAG_03206","SJAG_05353","SJAG_02690","SJAG_05105","SJAG_05173","SJAG_00884","SJAG_06597","SJAG_03898","SJAG_01221","SJAG_01354","SJAG_05372","SJAG_06642","SJAG_00857","SJAG_04210","SJAG_02200","SJAG_02822","SJAG_02348"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86320,88007,88690,88772,88773,88774,88775,89703,92063,94285,96671,106222,106950,108953,108954,108955,108956,108957,110292],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[102423,103253,111289,105088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix in the direction 5' to 3', driven by ATP hydrolysis.","definition_xrefs":["EC:5.6.2.4","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01221":null,"SJAG_01354":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02348":null,"SJAG_02690":null,"SJAG_02822":null,"SJAG_03206":null,"SJAG_03898":null,"SJAG_04210":null,"SJAG_04372":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-5' DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9613497","Reactome:R-HSA-75949","Reactome:R-HSA-9613490","Reactome:R-HSA-167097","Reactome:R-HSA-9613498","Reactome:R-HSA-174438","Reactome:R-HSA-9613494","GO:0043140","Reactome:R-HSA-9684118"],"synonyms":[{"name":"3' to 5' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 3' to 5' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 3'-5' DNA helicase activity","type":"exact"}],"termid":"GO:0043138","terms_by_termid":{"GO:0043138":null,"GO:1990518":null}}


id: PBO:0030358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytokinesis_during_cellular_hyperosmotic_response","termid":"PBO:0030358"}


id: GO:1905612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:bc","GOC:PARL","GO_REF:0000059","GOC:TermGenie","PMID:23409027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA binding","termid":"GO:1902416"},{"relation_name":"is_a","term_name":"regulation of mRNA cap binding","termid":"GO:1905610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA cap binding","synonyms":[{"name":"activation of mRNA cap binding","type":"narrow"},{"name":"up regulation of mRNA cap binding","type":"exact"},{"name":"up-regulation of mRNA cap binding","type":"exact"},{"name":"upregulation of mRNA cap binding","type":"exact"}],"termid":"GO:1905612"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: PBO:0113262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidic acid (PA)-binding nuclear envelope (NE)-specific ESCRT; homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of ESCRT-III like complex","termid":"PBO:0113262"}


id: GO:0090716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["GOC:add","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"},{"relation_name":"is_a","term_name":"immunological memory process","termid":"GO:0090713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response","termid":"GO:0090716"}


id: FYPO:0005037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen deprivation","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during nitrogen depletion","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005037"}


id: GO:0015601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + polar amino acid(out) = ADP + phosphate + polar amino acid(in).","definition_xrefs":["TC:3.A.1.3.10","EC:3.6.3.21"],"gene_count":0,"genotype_count":0,"name":"obsolete cystine/diaminopimelate porter activity (obsolete GO:0015601)","synonyms":[{"name":"cystine/diaminopimelate porter activity","type":"exact"}],"termid":"GO:0015601"}


id: PBO:0032767
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1 kinase consensus phosphorylation site is [RK]-X-[ST]","termid":"PBO:0032767"}


id: PBO:0090372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type ATPase, calcium transporting Pmr1","termid":"PBO:0090372"}


id: PBO:0056734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 3","termid":"PBO:0056734"}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: GO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","secondary_identifiers":["EC:3.5.5.-"],"termid":"GO:0016815"}


id: PBO:0036405
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ7 with an S. pombe MTS","termid":"PBO:0036405"}


id: PBO:0073052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 10 (gene/pseudogene)","termid":"PBO:0073052"}


id: GO:0030316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized monocyte acquires the specialized features of an osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["ISBN:0781735149","CL:0000092","GOC:add","PMID:12161749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast differentiation","synonyms":[{"name":"osteoclast cell differentiation","type":"exact"}],"termid":"GO:0030316"}


id: FYECO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zymolyase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zymolyase","termid":"FYECO:0000298"}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: GO:1990979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of copper ions passing through the blood-brain barrier.","definition_xrefs":["PMID:24614235"],"gene_count":0,"genotype_count":0,"name":"obsolete copper ion transport across blood-brain barrier (obsolete GO:1990979)","synonyms":[{"name":"copper ion transport across BBB","type":"related"}],"termid":"GO:1990979"}


id: PBO:0087257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; involved in sphingolipid-mediated signaling pathway that controls endocytosis; activates Ypk1p and Ypk2p, components of signaling cascade required for maintenance of cell wall integrity; contains a PH-like domain; redundant with Pkh2p; PKH1 has a paralog, PKH2, that arose from the whole genome duplication","termid":"PBO:0087257"}


id: GO:0032421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked stereocilia, arranged around a kinocilium on the apical surface of a sensory hair cell (e.g. a neuromast, auditory or vestibular hair cell). Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes.","definition_xrefs":["PMID:15661519","GOC:ecd","PMID:7840137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cluster of actin-based cell projections","termid":"GO:0098862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium bundle","synonyms":[{"name":"stereocilia bundle","type":"exact"}],"termid":"GO:0032421"}


id: GO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"lipoprotein localization","termid":"GO:0044872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipoprotein transport","termid":"GO:0042953"}


id: FYECO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Zn ions","synonyms":[{"name":"zinc ions added","type":"exact"}],"termid":"FYECO:0000172"}


id: MOD:01874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carboxy-L-valine.","definition_xrefs":["PubMed:4647257","PubMed:8312270","PubMed:18688235","PubMed:4593770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-valine","synonyms":[{"name":"(S)-2-carboxyamino-propanoic acid","type":"exact"},{"name":"2-carbamic-propanoic acid","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:01874"}


id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["EC:3.4.17.16","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"},{"name":"carboxypeptidase P activity","type":"narrow"},{"name":"membrane Pro-X carboxypeptidase activity","type":"narrow"},{"name":"membrane Pro-Xaa carboxypeptidase","type":"narrow"},{"name":"microsomal carboxypeptidase activity","type":"narrow"}],"termid":"GO:0031368"}


id: PBO:0024868
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pediatric medulloblastoma","termid":"PBO:0024868"}


id: PBO:0071196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 37","termid":"PBO:0071196"}


id: PATO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being in opposition round a common axis.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whorled","termid":"PATO:0001951"}


id: GO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase activity (obsolete GO:0051974)","synonyms":[{"name":"down regulation of telomerase activity","type":"exact"},{"name":"down-regulation of telomerase activity","type":"exact"},{"name":"downregulation of telomerase activity","type":"exact"},{"name":"inhibition of telomerase activity","type":"narrow"},{"name":"telomerase inhibitor","type":"related"}],"termid":"GO:0051974"}


id: PBO:0091323
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0091323"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: PBO:0069932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1225, pseudogene","termid":"PBO:0069932"}


id: PBO:0052153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ2 antisense RNA 1","termid":"PBO:0052153"}


id: GO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate determination","termid":"GO:0048374"},{"relation_name":"positively_regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"activation of lateral mesodermal cell fate determination","type":"narrow"},{"name":"positive regulation of lateral plate mesodermal cell fate determination","type":"exact"},{"name":"stimulation of lateral mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"upregulation of lateral mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048376"}


id: FYPO:0004849
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115595,115596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal protein metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular protein metabolic process","type":"exact"},{"name":"normal protein metabolism","type":"exact"}],"termid":"FYPO:0004849","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PATO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000848 relative auditory acuity (obsolete PATO:0000848)","termid":"PATO:0000848"}


id: GO:0051821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from a second organism to another place in the environment, where the two organisms are in a symbiotic interaction. The first organism may also move to a different organism.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of organism from other organism involved in symbiotic interaction (obsolete GO:0051821)","synonyms":[{"name":"dissemination or transmission of organism from other organism during symbiotic interaction","type":"related"}],"termid":"GO:0051821"}


id: GO:0008482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + sulfite = H2O2 + H+ + sulfate.","definition_xrefs":["RHEA:24600","EC:1.8.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sulfite oxidase activity","secondary_identifiers":["KEGG_REACTION:R00533","Reactome:R-HSA-1614544","MetaCyc:SULFITE-OXIDASE-RXN","MetaCyc:PWY-5326"],"synonyms":[{"name":"sulfite:oxygen oxidoreductase activity","type":"related"},{"name":"sulphite oxidase activity","type":"exact"}],"termid":"GO:0008482"}


id: PBO:0078378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 2","termid":"PBO:0078378"}


id: FYPO:0003296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ribosome binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal ribosome binding","termid":"FYPO:0003296"}


id: PBO:0060571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 7, pseudogene","termid":"PBO:0060571"}


id: MOD:00824
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to dehydroalanine.","definition_xrefs":["PubMed:6838602","Unimod:400","PubMed:10220322","PubMed:1547888","RESID:AA0181#TYR","PubMed:1815586","PubMed:7947813","PubMed:8239649","PubMed:2914619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Tyr)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dHAla(Tyr)","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:00824"}


id: GO:0032870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hormone stimulus","termid":"GO:0032870"}


id: PBO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp6","termid":"PBO:0005416"}


id: PBO:0046980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member D, pseudogene","termid":"PBO:0046980"}


id: PBO:0027395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027395"}


id: PBO:0091509
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3855791delG","termid":"PBO:0091509"}


id: GO:0072120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the pronephros to attain its fully functional state. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros maturation","synonyms":[{"name":"pronephric kidney maturation","type":"exact"}],"termid":"GO:0072120"}


id: GO:0032557
data:
  {"annotated_genes":["SJAG_02288","SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83817,86907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002135"},{"annotations":[87721,86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to a pyrimidine ribonucleotide, any compound consisting of a pyrimidine ribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide binding","termid":"GO:0019103"},{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02288":null,"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrimidine ribonucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032557","terms_by_termid":{"GO:0002134":null,"GO:0002135":null}}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: PBO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like","termid":"PBO:0042571"}


id: PBO:0072117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 6","termid":"PBO:0072117"}


id: PBO:0017503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glutamate O-methyltransferase (predicted)","termid":"PBO:0017503"}


id: PATO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lobate","termid":"PATO:0001367"}


id: PBO:0058634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6766","termid":"PBO:0058634"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: PBO:0059377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 2","termid":"PBO:0059377"}


id: PomGeneEx:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a lower level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level decreased","synonyms":[{"name":"decreased protein level","type":"exact"},{"name":"protein expression decreased","type":"exact"}],"termid":"PomGeneEx:0000019"}


id: GO:0042594
data:
  {"annotated_genes":["SJAG_01184","SJAG_04873","SJAG_02973","SJAG_00534","SJAG_02380","SJAG_00233","SJAG_00457","SJAG_03371","SJAG_02474","SJAG_03519","SJAG_02424","SJAG_00781","SJAG_03048","SJAG_00209","SJAG_04031","SJAG_02026","SJAG_01245","SJAG_04032","SJAG_01509","SJAG_03309","SJAG_03486","SJAG_01970","SJAG_00169","SJAG_02699","SJAG_04067","SJAG_00380","SJAG_00256","SJAG_04677","SJAG_04725","SJAG_04743","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84097,87353,91266,105668,106959,85485,90723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[89017,107375,96462,112497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[90153,90161,99802,88495,96504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[103578,111790,109346,109345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[94587,97140,105259,114356,90675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[111583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[98817,99851],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[97404,83930],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[98408],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042594","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: FYPO:0003432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to histone H3 methylated on the lysine at position 9 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3K9me binding","synonyms":[{"name":"normal K9-methylated histone H3 binding","type":"exact"},{"name":"normal methylated histone H3K9me binding","type":"exact"}],"termid":"FYPO:0003432"}


id: GO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density lipoprotein (obsolete GO:0005322)","synonyms":[{"name":"LDL","type":"exact"},{"name":"low-density lipoprotein","type":"exact"}],"termid":"GO:0005322"}


id: SO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA fragment generated by sonication. Sonication is a technique used to sheer DNA into smaller fragments.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonicate_fragment","synonyms":[{"name":"sonicate fragment","type":"exact"}],"termid":"SO:0001253"}


id: PBO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, highly conserved across species; homolog of human CYB5R4; null mutant displays reduced frequency of mitochondrial genome loss; AIM33 has a paralog, PGA3, that arose from the whole genome duplication","termid":"PBO:0086038"}


id: PBO:0088328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit E","termid":"PBO:0088328"}


id: PR:P39750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flap endonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02239","PANTHER:PTHR11081:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap endonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.06c","secondary_identifiers":["UniProtKB:P39750"],"synonyms":[{"name":"DNA repair protein rad2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FEN-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FEN1","type":"exact"},{"name":"flap structure-specific endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39750"}


id: SO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by pyrosequencing technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrosequenced_read","synonyms":[{"name":"pyorsequenced read","type":"related"}],"termid":"SO:0001424"}


id: GO:1903191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyoxal.","definition_xrefs":["GO_REF:0000068","GOC:bf","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal biosynthetic process","synonyms":[{"name":"glyoxal anabolism","type":"exact"},{"name":"glyoxal biosynthesis","type":"exact"},{"name":"glyoxal formation","type":"exact"},{"name":"glyoxal synthesis","type":"exact"}],"termid":"GO:1903191"}


id: PBO:0028806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028806"}


id: PBO:0056555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM3AP antisense RNA 1","termid":"PBO:0056555"}


id: PBO:0076858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 2","termid":"PBO:0076858"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: FYPO:0002280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:vw","PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division","synonyms":[{"name":"inviable following spore germination, single cell division","type":"exact"},{"name":"inviable germinated spore, single cell division","type":"exact"},{"name":"lethal after spore germination, single cell division","type":"exact"}],"termid":"FYPO:0002280"}


id: GO:2001094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xylotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"xylotriose transport","termid":"GO:2001094"}


id: FYPO:0001443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"},{"relation_name":"is_a","term_name":"abolished transcription","termid":"FYPO:0002877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"abolished transcription during vegetative growth","synonyms":[{"name":"abolished transcription during mitotic cell cycle","type":"related"},{"name":"transcription abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001443"}


id: GO:2001154
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ethanol fermentation","type":"exact"},{"name":"regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001154","terms_by_termid":{"GO:2001172":null}}


id: GO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"positively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: PBO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 17","termid":"PBO:0062234"}


id: PBO:0066724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 21","termid":"PBO:0066724"}


id: GO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell differentiation involved in amphid sensory organ development","termid":"GO:0003398"}


id: PBO:0057729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1304","termid":"PBO:0057729"}


id: PBO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Z, alpha-1,2-mannosyltransferase Smp3","termid":"PBO:0090387"}


id: PBO:0062890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 2","termid":"PBO:0062890"}


id: PBO:0046589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 31","termid":"PBO:0046589"}


id: PBO:0082968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for sporulation","termid":"PBO:0082968"}


id: PBO:0089944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane alpha-1,3-glucan synthase Mok12","termid":"PBO:0089944"}


id: PBO:0056271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1A member 2","termid":"PBO:0056271"}


id: FYPO:0004582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"increased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"increased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"increased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"increased nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004582"}


id: GO:0071264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to starvation","termid":"GO:0071262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to starvation","synonyms":[{"name":"activation of translation initiation in response to starvation","type":"narrow"},{"name":"positive regulation of translational initiation in response to nutrient starvation","type":"exact"},{"name":"stimulation of translation initiation in response to starvation","type":"narrow"},{"name":"up regulation of translation initiation in response to starvation","type":"exact"},{"name":"up-regulation of translation initiation in response to starvation","type":"exact"},{"name":"upregulation of translation initiation in response to starvation","type":"exact"}],"termid":"GO:0071264"}


id: PBO:0071190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 31","termid":"PBO:0071190"}


id: GO:0097597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:11432808","PMID:4777416","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc","synonyms":[{"name":"adhesive disc","type":"related"},{"name":"ventral adhesive disc","type":"exact"},{"name":"ventral disk","type":"related"}],"termid":"GO:0097597"}


id: PBO:0080988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 4","termid":"PBO:0080988"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["PubMed:8382902","Unimod:366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: GO:0045267
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85196],"is_not":false,"summary":null,"term":"GO:0045267"}]},"cv_name":"cellular_component","definition":"The hexamer that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting ATP synthase, catalytic core","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, catalytic core","type":"exact"}],"termid":"GO:0045267","terms_by_termid":{"GO:0045267":null}}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: MOD:00300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl-5-poly(ADP-ribose).","definition_xrefs":["Unimod:213#E","PubMed:11246023","RESID:AA0295","PubMed:8533153","DeltaMass:0","PubMed:15842200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamyl-5-poly(ADP-ribose)","synonyms":[{"name":"(S)-2-amino-5-poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl]oxy-5-oxopentanoic acid","type":"exact"},{"name":"ADP Ribose addition","type":"related"},{"name":"ADP-Ribosyl","type":"related"},{"name":"L-glutamyl-5-poly(ADP-ribose)","type":"exact"},{"name":"L-isoglutamyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES PolyADP-ribosyl glutamic acid","type":"exact"},{"name":"O-ADP-ribosylation (on Glutamate or C terminus)","type":"exact"}],"termid":"MOD:00300"}


id: GO:1990864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone-releasing hormone stimulus. Growth hormone-releasing hormone regulates the release of growth hormone, as well as some pancreatic proteins, and possibly other proteins.","definition_xrefs":["PMID:7720628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to growth hormone-releasing hormone","synonyms":[{"name":"response to GHRF","type":"exact"},{"name":"response to GRF","type":"exact"},{"name":"response to growth hormone-releasing factor","type":"exact"},{"name":"response to sermorelin","type":"related"},{"name":"response to somatocrinin","type":"exact"},{"name":"response to somatoliberin","type":"exact"},{"name":"response to somatorelin","type":"exact"}],"termid":"GO:1990864"}


id: PBO:0077164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 5, transcriptional modulator","termid":"PBO:0077164"}


id: GO:0097081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a vascular smooth muscle cell fate and their capacity to differentiate into vascular smooth muscle cells. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate commitment","termid":"GO:0042693"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate commitment","synonyms":[{"name":"vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0097081"}


id: SO:0001609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide","synonyms":[{"name":"elongated polypeptide","type":"exact"}],"termid":"SO:0001609"}


id: PBO:0109030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR7 divergent transcript","termid":"PBO:0109030"}


id: PBO:0029351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydroxyurea","termid":"PBO:0029351"}


id: GO:0018184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein amino acid by polyamination.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein polyamination","synonyms":[{"name":"protein amino acid polyamination","type":"exact"}],"termid":"GO:0018184"}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: FYPO:0004002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of protein phosphorylation is longer than normal during a cellular response to hydroxyurea. All phosphorylation may be affected, or only phosphorylation of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein modification during vegetative growth","termid":"FYPO:0000548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased duration of protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"increased duration of protein phosphorylation during cellular response to HU","type":"exact"},{"name":"increased duration of protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased duration of protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"prolonged protein phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004002"}


id: SO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_taurinomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_taurinomethyluridine","secondary_identifiers":["RNAMOD:098"],"synonyms":[{"name":"5-taurinomethyluridine","type":"exact"},{"name":"five taurinomethyluridine","type":"exact"},{"name":"tm5U","type":"exact"}],"termid":"SO:0001378"}


id: PBO:0082267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes the human Rh factors; expression is under the nitrogen catabolite repression regulation; activity regulated by TORC1 effectors, Npr1p and Par32p; human homolog RHCG complements yeast null mutant; mutations in human homolog RHCG implicated in metabolic acidosis; MEP1 has a paralog, MEP3, that arose from the whole genome duplication","termid":"PBO:0082267"}


id: GO:1900649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"regulation of dehydroaustinol anabolism","type":"exact"},{"name":"regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"regulation of dehydroaustinol formation","type":"exact"},{"name":"regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900649"}


id: GO:0030270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydromethanopterin + N-formylmethanofuran + H+ = N(5)-formyl-5,6,7,8-tetrahydromethanopterin + methanofuran.","definition_xrefs":["EC:2.3.1.101","RHEA:18061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.101-RXN","UM-BBD_reactionID:r0346","GO:0018714","KEGG_REACTION:R03390"],"synonyms":[{"name":"FTR","type":"related"},{"name":"N-formylmethanofuran(CHO-MFR):tetrahydromethanopterin(H4MPT) formyltransferase activity","type":"related"},{"name":"formylmethanofuran-tetrahydromethanopterin formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin 5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:5,6,7,8-tetrahydromethanopterin N5-formyltransferase activity","type":"related"},{"name":"formylmethanofuran:tetrahydromethanopterin formyltransferase activity","type":"related"}],"termid":"GO:0030270"}


id: PBO:0065795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing 2 pseudogene 1","termid":"PBO:0065795"}


id: GO:0052927
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73951,83818],"is_not":false,"summary":null,"term":"GO:0052927"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + CTP = a tRNA with a 3' CC end + 2 diphosphate.","definition_xrefs":["PMID:31936900","PMID:33095240","RHEA:60008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003824","GO:0140101","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"CTP:tRNA cytidylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0052928"],"synonyms":[{"name":"CTP:3'-cytidine-tRNA cytidylyltransferase activity","type":"related"}],"termid":"GO:0052927","terms_by_termid":{"GO:0052927":null}}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: GO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to arsenic-containing substance","synonyms":[{"name":"cellular response to arsenic","type":"exact"}],"termid":"GO:0071243"}


id: PBO:0068226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 533","termid":"PBO:0068226"}


id: PBO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030983"}


id: GO:0033953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,3-alpha-L-galactosidic linkages in agarose, yielding agarotetraose as the major product.","definition_xrefs":["EC:3.2.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alpha-agarase activity","secondary_identifiers":["MetaCyc:3.2.1.158-RXN"],"synonyms":[{"name":"agarase A33 activity","type":"narrow"},{"name":"agarase activity","type":"broad"},{"name":"agarose 3-glycanohydrolase activity","type":"broad"}],"termid":"GO:0033953"}


id: PBO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 5A","termid":"PBO:0042826"}


id: GO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}


id: PBO:0088619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk31","termid":"PBO:0088619"}


id: PBO:0074042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 25","termid":"PBO:0074042"}


id: PBO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 8 subfamily B member 1","termid":"PBO:0044470"}


id: PBO:0063947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINK1 antisense RNA","termid":"PBO:0063947"}


id: PBO:0078054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 44","termid":"PBO:0078054"}


id: GO:0052695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an organic chemical by the conjugation of glucuronic acid. The substances resulting from glucuronidation are known as glucuronosides (or glucuronides) and are often much more water-soluble than the non-glucuronic acid-containing precursor.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cellular glucuronidation","synonyms":[{"name":"cellular glucuronide biosynthesis","type":"exact"},{"name":"cellular glucuronide biosynthetic process","type":"exact"},{"name":"cellular glucuronoside biosynthesis","type":"exact"},{"name":"cellular glucuronoside biosynthetic process","type":"exact"}],"termid":"GO:0052695"}


id: GO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cesium stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cesium ion","termid":"GO:0010164"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cesium ion","synonyms":[{"name":"cellular response to cesium","type":"exact"}],"termid":"GO:0071278"}


id: PBO:0072528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 57","termid":"PBO:0072528"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: FYPO:0007727
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of late endosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal late endosome morphology","synonyms":[{"name":"abnormal PVE morphology","type":"exact"},{"name":"abnormal late endosome morphology during mitotic cell cycle","type":"related"},{"name":"abnormal late endosome morphology during vegetative growth","type":"exact"},{"name":"abnormal prevacuolar compartment morphology","type":"exact"},{"name":"abnormal prevacuolar endosome morphology","type":"exact"}],"termid":"FYPO:0007727"}


id: GO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through gene conversion.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"is_a","term_name":"somatic cell DNA recombination","termid":"GO:0016444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"}


id: PBO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-U ortholog Mis17","termid":"PBO:0025517"}


id: PBO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spondyloepiphyseal dysplasia tarda","termid":"PBO:0002189"}


id: PBO:0047611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 3","termid":"PBO:0047611"}


id: SO:1000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The insertion of one or more amino acids from the polypeptide, without affecting the surrounding sequence.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000096 sequence_variant_causing_amino_acid_insertion (obsolete SO:1000096)","synonyms":[{"name":"mutation causing amino acid insertion","type":"related"},{"name":"sequence variant causing amino acid insertion","type":"exact"}],"termid":"SO:1000096"}


id: GO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular polysaccharide biosynthetic process","termid":"GO:0045226"},{"relation_name":"is_a","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"capsule polysaccharide biosynthetic process","synonyms":[{"name":"capsular polysaccharide biosynthesis","type":"exact"},{"name":"capsular polysaccharide biosynthetic process","type":"exact"},{"name":"capsule polysaccharide anabolism","type":"exact"},{"name":"capsule polysaccharide biosynthesis","type":"exact"},{"name":"capsule polysaccharide formation","type":"exact"},{"name":"capsule polysaccharide synthesis","type":"exact"}],"termid":"GO:0045227"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: PBO:0011120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa1","termid":"PBO:0011120"}


id: PBO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 5","termid":"PBO:0047504"}


id: GO:1905445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["PMID:15533940","GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"positively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of clathrin coat assembly","synonyms":[{"name":"activation of clathrin cage assembly","type":"narrow"},{"name":"activation of clathrin coat assembly","type":"narrow"},{"name":"positive regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin cage assembly","type":"exact"},{"name":"up regulation of clathrin coat assembly","type":"exact"},{"name":"up-regulation of clathrin cage assembly","type":"exact"},{"name":"up-regulation of clathrin coat assembly","type":"exact"},{"name":"upregulation of clathrin cage assembly","type":"exact"},{"name":"upregulation of clathrin coat assembly","type":"exact"}],"termid":"GO:1905445"}


id: GO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process whereby karyomere membranes fuse during interphase to form a single lobed nucleus.","definition_xrefs":["GOC:dph","PMID:2734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"karyomere membrane fusion","termid":"GO:0061472"}


id: PBO:0043799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPLANE1 antisense RNA 1","termid":"PBO:0043799"}


id: GO:1904671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of cell differentiation that is involved in stem cell population maintenance.","definition_xrefs":["GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000060","GOC:rph","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation involved in stem cell population maintenance","synonyms":[{"name":"down regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"down-regulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"down-regulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"downregulation of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"downregulation of cell differentiation involved in stem cell population maintenance","type":"exact"},{"name":"inhibition of cell differentiation involved in maintenance of pluripotency","type":"related"},{"name":"inhibition of cell differentiation involved in stem cell population maintenance","type":"narrow"},{"name":"negative regulation of cell differentiation involved in maintenance of pluripotency","type":"related"}],"termid":"GO:1904671"}


id: GO:0071074
data:
  {"annotated_genes":["SJAG_02390"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71173],"is_not":false,"summary":null,"term":"GO:0071074"}]},"cv_name":"molecular_function","definition":"Binding to eukaryotic initiation factor eIF2, a protein complex involved in the initiation of ribosome-mediated translation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation initiation factor binding","termid":"GO:0031369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02390":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"eukaryotic initiation factor eIF2 binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071074","terms_by_termid":{"GO:0071074":null}}


id: PBO:0011492
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tagging Tra1 at its C-terminus is as detrimental as deletion","termid":"PBO:0011492"}


id: PBO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16","termid":"PBO:0061635"}


id: GO:0180041
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99056],"is_not":false,"summary":null,"term":"GO:0180041"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->4)-D-mannosyl-D-mannose linkage.","definition_xrefs":["PMID:11226175","PMID:15635094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid mannosyltransferase activity","termid":"GO:0004376"},{"relation_name":"is_a","term_name":"alpha-1,4-mannosyltransferase activity","termid":"GO:0051751"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"glycolipid 1,4-alpha-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I activity","type":"exact"},{"name":"glycosylphosphatidylinositol-mannosyltransferase I","type":"exact"}],"termid":"GO:0180041","terms_by_termid":{"GO:0180041":null}}


id: PBO:0077129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TINCR ubiquitin domain containing","termid":"PBO:0077129"}


id: GO:0052124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism within its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis within host (obsolete GO:0052124)","termid":"GO:0052124"}


id: PBO:0074681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63C","termid":"PBO:0074681"}


id: GO:2001043
data:
  {"annotated_genes":["SJAG_01774","SJAG_02645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85798,103953],"is_not":false,"summary":null,"term":"GO:2001043"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01774":null,"SJAG_02645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of septum digestion after cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cell separation after cytokinesis","type":"related"},{"name":"positive regulation of cytokinetic cell separation","type":"related"}],"termid":"GO:2001043","terms_by_termid":{"GO:2001043":null}}


id: PBO:0064340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmalemma vesicle associated protein","termid":"PBO:0064340"}


id: PBO:0012053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein (predicted)","termid":"PBO:0012053"}


id: PBO:0038773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTRT1 pseudogene 1","termid":"PBO:0038773"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: PBO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein","termid":"PBO:0000133"}


id: GO:0150033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to lysosome.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:24305806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to lysosome","termid":"GO:0150031"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to lysosome","termid":"GO:0061462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to lysosome","termid":"GO:0150033"}


id: PBO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornulin","termid":"PBO:0043919"}


id: PBO:0003461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transporter (predicted)","termid":"PBO:0003461"}


id: GO:1904343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24170253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"is_a","term_name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"},{"relation_name":"positively_regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of colon smooth muscle contraction","synonyms":[{"name":"activation of colon smooth muscle contraction","type":"narrow"},{"name":"up regulation of colon smooth muscle contraction","type":"exact"},{"name":"up-regulation of colon smooth muscle contraction","type":"exact"},{"name":"upregulation of colon smooth muscle contraction","type":"exact"}],"termid":"GO:1904343"}


id: GO:0050472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrozeatin + NADP+ = H+ + NADPH + zeatin.","definition_xrefs":["RHEA:12757","EC:1.3.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zeatin reductase activity","secondary_identifiers":["MetaCyc:ZEATIN-REDUCTASE-RXN","KEGG_REACTION:R05702"],"synonyms":[{"name":"dihydrozeatin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050472"}


id: GO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of necroptotic process","termid":"GO:0060544"},{"relation_name":"is_a","term_name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"},{"relation_name":"negatively_regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of necroptotic process","synonyms":[{"name":"negative regulation of necroptosis","type":"narrow"}],"termid":"GO:0060546"}


id: FYPO:0003552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA catabolic process","synonyms":[{"name":"decreased RNA breakdown","type":"exact"},{"name":"decreased RNA catabolism","type":"exact"},{"name":"decreased RNA degradation","type":"exact"},{"name":"reduced RNA catabolic process","type":"exact"}],"termid":"FYPO:0003552"}


id: GO:1900525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:dgf","GOC:TermGenie","PMID:8614637"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900525)","synonyms":[{"name":"activation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900525"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: GO:1901009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (S)-scoulerine.","definition_xrefs":["PMID:15672841","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(S)-scoulerine biosynthetic process","synonyms":[{"name":"(S)-scoulerine anabolism","type":"exact"},{"name":"(S)-scoulerine biosynthesis","type":"exact"},{"name":"(S)-scoulerine formation","type":"exact"},{"name":"(S)-scoulerine synthesis","type":"exact"}],"termid":"GO:1901009"}


id: GO:1905219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet formation.","definition_xrefs":["PMID:10606160","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of myeloid cell differentiation","termid":"GO:0045637"},{"relation_name":"regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of platelet formation","synonyms":[{"name":"regulation of platelet extrusion","type":"exact"}],"termid":"GO:1905219"}


id: FYPO:0002346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the outer repeat region of the centromere is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere outer repeat","synonyms":[{"name":"abnormal centromere outer repeat region chromatin silencing","type":"exact"},{"name":"abnormal chromatin silencing at centromere otr","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at centromere outer repeat region during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"abnormal chromatin silencing at pericentric region","type":"related"},{"name":"abnormal chromatin silencing at pericentromeric region","type":"related"},{"name":"abnormal heterochromatic silencing at centromere outer repeat region","type":"exact"},{"name":"abnormal heterochromatin silencing at centromere outer repeat region","type":"exact"}],"termid":"FYPO:0002346"}


id: PBO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Mvp1 (predicted)","termid":"PBO:0002062"}


id: GO:0060962
data:
  {"annotated_genes":["SJAG_02723","SJAG_01243","SJAG_02671","SJAG_03241"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102651,84037,89535,85529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01243":null,"SJAG_02671":null,"SJAG_02723":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of ribosomal protein gene transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060962","terms_by_termid":{"GO:0060963":null}}


id: PBO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell","termid":"PBO:0030367"}


id: PBO:0028910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_organization_during_vegetative_growth","termid":"PBO:0028910"}


id: GO:0098670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that mediates/triggers viral entry by endocytosis/pinocytosis or by inducing fusion/penetration.","definition_xrefs":["VZ:3942","PMID:18351291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host entry receptor","type":"exact"}],"termid":"GO:0098670"}


id: PBO:0089756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H dehydrogenase (quinone)","termid":"PBO:0089756"}


id: PBO:0044917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome chromosome region","termid":"PBO:0044917"}


id: GO:0032407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MutSalpha complex binding","termid":"GO:0032407"}


id: PBO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_rDNA","termid":"PBO:0031227"}


id: GO:0016031
data:
  {"annotated_genes":["SJAG_03358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95562],"is_not":false,"summary":null,"term":"GO:0016031"}]},"cv_name":"biological_process","definition":"The process in which a tRNA is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:10988073","PMID:11121736","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into mitochondrion","termid":"GO:0035927"},{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"tRNA import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic tRNA import into mitochondria","type":"exact"},{"name":"cytoplasmic tRNA import into mitochondrion","type":"narrow"},{"name":"cytoplasmic tRNA transport into mitochondrion","type":"exact"},{"name":"cytoplasmic tRNA, mitochondrial import","type":"exact"},{"name":"mitochondrial import of cytoplasmic tRNA","type":"narrow"},{"name":"nuclear-encoded tRNA import into mitochondrion","type":"narrow"}],"termid":"GO:0016031","terms_by_termid":{"GO:0016031":null}}


id: PBO:0046907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 27 member B","termid":"PBO:0046907"}


id: GO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutive glucose:proton symporter activity (obsolete GO:0005357)","synonyms":[{"name":"constitutive hydrogen/glucose transporter activity","type":"broad"},{"name":"constitutive hydrogen:glucose symporter activity","type":"exact"},{"name":"constitutive hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005357"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: PBO:0029616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029616"}


id: PBO:0017898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex ATP-dependent DNA helicase subunit Mit1","termid":"PBO:0017898"}


id: GO:0015416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + phosphonate(out) = ADP + phosphate + phosphonate(in). A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["RHEA:18065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type phosphonate transporter activity","secondary_identifiers":["GO:0042917","GO:0015604","GO:0102017","EC:7.3.2.2","MetaCyc:3.6.3.28-RXN"],"synonyms":[{"name":"ATP phosphohydrolase (phosphonate-transporting)","type":"related"},{"name":"ATPase-coupled alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled organic phosphonate transmembrane transporter activity","type":"related"},{"name":"alkylphosphonate ABC transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane transporter activity","type":"narrow"},{"name":"alkylphosphonate transmembrane-transporting ATPase activity","type":"narrow"},{"name":"organic phosphonate transmembrane transporter activity","type":"broad"},{"name":"organic phosphonate transmembrane-transporting ATPase activity","type":"related"},{"name":"phosphonate ABC transporter","type":"exact"},{"name":"phosphonate transporting ATPase activity","type":"related"},{"name":"phosphonate-transporting ATPase activity","type":"related"}],"termid":"GO:0015416"}


id: PR:Q09699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.08c","synonyms":[{"name":"SWI/SNF complex subunit snf5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf5","type":"exact"}],"termid":"PR:Q09699"}


id: PBO:0050330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 32","termid":"PBO:0050330"}


id: PBO:0075008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-19","termid":"PBO:0075008"}


id: PBO:0062124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 2","termid":"PBO:0062124"}


id: FYPO:0009076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on sucrose carbon source","synonyms":[{"name":"increased growth on sucrose carbon source","type":"broad"},{"name":"increased vegetative cell growth on sucrose carbon source","type":"exact"}],"termid":"FYPO:0009076"}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: GO:0099164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane component of the postsynaptic specialization of a symmetric synapse. This is the region of the postsynaptic membrane in which the population of neurotransmitter receptors involved in synaptic transmission are concentrated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization membrane of symmetric synapse","termid":"GO:0099164"}


id: PBO:0075768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 1","termid":"PBO:0075768"}


id: PBO:0058546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6125","termid":"PBO:0058546"}


id: GO:0044028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An decrease in the epigenetic methylation of cytosine and adenosine residues in DNA.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA hypomethylation (obsolete GO:0044028)","termid":"GO:0044028"}


id: GO:1901484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transcription factor catabolic process.","definition_xrefs":["GOC:al","GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription factor catabolic process (obsolete GO:1901484)","synonyms":[{"name":"down regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor breakdown","type":"exact"},{"name":"down regulation of transcription factor catabolic process","type":"exact"},{"name":"down regulation of transcription factor catabolism","type":"exact"},{"name":"down regulation of transcription factor degradation","type":"exact"},{"name":"down-regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"down-regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor breakdown","type":"exact"},{"name":"down-regulation of transcription factor catabolic process","type":"exact"},{"name":"down-regulation of transcription factor catabolism","type":"exact"},{"name":"down-regulation of transcription factor degradation","type":"exact"},{"name":"downregulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"downregulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor breakdown","type":"exact"},{"name":"downregulation of transcription factor catabolic process","type":"exact"},{"name":"downregulation of transcription factor catabolism","type":"exact"},{"name":"downregulation of transcription factor degradation","type":"exact"},{"name":"inhibition of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"inhibition of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"inhibition of transcription factor breakdown","type":"exact"},{"name":"inhibition of transcription factor catabolic process","type":"narrow"},{"name":"inhibition of transcription factor catabolism","type":"exact"},{"name":"inhibition of transcription factor degradation","type":"exact"},{"name":"negative regulation of proteasome-mediated transcription factor catabolism","type":"exact"},{"name":"negative regulation of sequence-specific DNA binding transcription factor catabolic process","type":"exact"},{"name":"negative regulation of transcription factor breakdown","type":"exact"},{"name":"negative regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of transcription factor degradation","type":"exact"}],"termid":"GO:1901484"}


id: GO:0018884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbazole metabolic process","secondary_identifiers":["UM-BBD_pathwayID:car"],"synonyms":[{"name":"CAR metabolic process","type":"exact"},{"name":"CAR metabolism","type":"exact"},{"name":"carbazole metabolism","type":"exact"}],"termid":"GO:0018884"}


id: GO:0071808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axoneme part that is found in the flagella of mammalian sperm and is located in the middle piece between the outer dense fibers (on the concave side of outer dense fibers as seen in cross-section).","definition_xrefs":["GOC:sl","PMID:20108326","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"satellite fibril","termid":"GO:0071808"}


id: PBO:0045299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 51","termid":"PBO:0045299"}


id: PBO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-8 (pseudogene)","termid":"PBO:0051356"}


id: FYPO:0002334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a diploid cell with a single functional copy of a gene grows faster than a diploid with two (on no) functional copies.","definition_xrefs":["PMID:23531409","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"haploproficient","synonyms":[{"name":"haploproficient during mitotic cell cycle","type":"related"},{"name":"haploproficient during vegetative growth","type":"exact"}],"termid":"FYPO:0002334"}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: FYPO:0002651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division results in the connection of a single kinetochore to both spindle poles.","definition_xrefs":["PMID:17426725","PMID:21306900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"merotelic kinetochore attachment","synonyms":[{"name":"merotelic attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"FYPO:0002651"}


id: FYPO:0007055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which  endosome organization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0007032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal endosome organization","synonyms":[{"name":"during vegetative growth during mitotic cell cycle","type":"related"},{"name":"normal endosome organisation","type":"exact"},{"name":"normal endosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007055"}


id: PBO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 3","termid":"PBO:0046017"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: GO:0009697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"salicylic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-981"],"synonyms":[{"name":"salicylate biosynthetic process","type":"exact"},{"name":"salicylic acid anabolism","type":"exact"},{"name":"salicylic acid biosynthesis","type":"exact"},{"name":"salicylic acid formation","type":"exact"},{"name":"salicylic acid synthesis","type":"exact"}],"termid":"GO:0009697"}


id: FYPO:0004485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein deacetylation during vegetative growth","synonyms":[{"name":"abnormal protein deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004485"}


id: GO:0007095
data:
  {"annotated_genes":["SJAG_02771","SJAG_02098","SJAG_00640","SJAG_03942","SJAG_01146","SJAG_02266","SJAG_02576","SJAG_01873","SJAG_01429","SJAG_01680","SJAG_00364","SJAG_02563","SJAG_04671","SJAG_01205","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84619,85188,86272,87478,87839,89992,95381,96559,97075,102608,105315,107733,110265,113030,113708],"is_not":false,"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["GOC:mtg_cell_cycle","PMID:16299494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03942":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1902504","GO:0072434","GO:0072425","GO:1902505","GO:1902506","GO:0031572"],"synonyms":[{"name":"G2 DNA damage checkpoint","type":"related"},{"name":"G2/M transition DNA damage checkpoint","type":"exact"},{"name":"down regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"inhibition of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"negative regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"negative regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"signal transduction involved in G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0007095","terms_by_termid":{"GO:0007095":null}}


id: GO:0140200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in regulation of heart rate (obsolete GO:0140200)","termid":"GO:0140200"}


id: GO:0106112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0106111"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cohesin loading","termid":"GO:1905412"},{"relation_name":"negatively_regulates","term_name":"mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0062022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0106112"}


