# terms

id: PBO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC vitamin D binding protein","termid":"PBO:0048448"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt","GOC:kv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["GO:0071884","Reactome:R-HSA-163625","Reactome:R-HSA-381612"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: GO:0008096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the epoxide in a juvenile hormone to the corresponding diol.","definition_xrefs":["PMID:8396141","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"juvenile hormone epoxide hydrolase activity","termid":"GO:0008096"}


id: PBO:0065988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAF1 pseudogene 1","termid":"PBO:0065988"}


id: PBO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor 2","termid":"PBO:0043056"}


id: PR:O42868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase II subunit A C-terminal domain phosphatase SSU72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01329","PANTHER:PTHR20383:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A C-terminal domain phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.04","secondary_identifiers":["UniProtKB:O42868"],"synonyms":[{"name":"CTD phosphatase ssu72 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SSU72","type":"exact"},{"name":"suppressor of SUA7 protein 2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42868"}


id: FYPO:0000067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of brefeldin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to brefeldin A","synonyms":[{"name":"resistance to BFA","type":"exact"},{"name":"resistance to brefeldin A during mitotic cell cycle","type":"related"},{"name":"resistance to brefeldin A during vegetative growth","type":"exact"},{"name":"resistant to Brefeldin A","type":"exact"}],"termid":"FYPO:0000067"}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: MOD:01808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-leucine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:01808"}


id: PR:000027845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dma1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1","synonyms":[{"name":"dma1","type":"exact"}],"termid":"PR:000027845"}


id: GO:0032292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon ensheathment","synonyms":[{"name":"ensheathment of axons in peripheral nervous system","type":"exact"}],"termid":"GO:0032292"}


id: PBO:0085444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Porphobilinogen deaminase; catalyzes the conversion of 4-porphobilinogen to hydroxymethylbilane, the third step in heme biosynthesis; localizes to the cytoplasm and nucleus; expression is regulated by Hap2p-Hap3p, but not by levels of heme; human homolog HMBS can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0085444"}


id: PBO:0041704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 1 pseudogene 2","termid":"PBO:0041704"}


id: PBO:0082208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; adds the fourth and fifth alpha-1,3-linked mannose residues to O-linked glycans during protein O-glycosylation","termid":"PBO:0082208"}


id: GO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052220)","synonyms":[{"name":"positive aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"positive aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052220"}


id: FYPO:0006578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type). The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"normal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006578"}


id: GO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamin diphosphate = ADP + thiamin triphosphate.","definition_xrefs":["EC:2.7.4.15","MetaCyc:THIAMIN-DIPHOSPHATE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"thiamine-diphosphate kinase activity","secondary_identifiers":["Reactome:R-HSA-997381","RHEA:11240"],"synonyms":[{"name":"ATP:thiamin-diphosphate phosphotransferase activity","type":"related"},{"name":"ATP:thiamine-diphosphate phosphotransferase activity","type":"related"},{"name":"TDP kinase activity","type":"related"},{"name":"protein bound thiamin diphosphate:ATP phosphoryltransferase activity","type":"related"},{"name":"thiamin diphosphate kinase activity","type":"exact"},{"name":"thiamin diphosphate phosphotransferase activity","type":"related"},{"name":"thiamin pyrophosphate kinase activity","type":"related"},{"name":"thiamin-diphosphate kinase activity","type":"exact"},{"name":"thiamine diphosphate kinase activity","type":"related"}],"termid":"GO:0050331"}


id: PBO:0067272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 350, pseudogene","termid":"PBO:0067272"}


id: GO:0003730
data:
  {"annotated_genes":["SJAG_01813","SJAG_00686","SJAG_03283","SJAG_01650","SJAG_04818","SJAG_04946","SJAG_00759","SJAG_04084","SJAG_00670","SJAG_03853","SJAG_04427","SJAG_00391","SJAG_03214","SJAG_04825","SJAG_02036","SJAG_16457","SJAG_01222","SJAG_04682","SJAG_04880","SJAG_04271","SJAG_03476","SJAG_03696","SJAG_04824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72115,73610,84481,85552,85768,93154,94180,94546,96118,103724,107577,111150,114308,114904],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[100913,100417,105934,114307,77568,110705,101265,107075,109335,114300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035925"}]},"cv_name":"molecular_function","definition":"Binding to a 3' untranslated region of an mRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01813":null,"SJAG_02036":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03476":null,"SJAG_03696":null,"SJAG_03853":null,"SJAG_04084":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mRNA 3'-UTR binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mRNA 3' UTR binding","type":"exact"}],"termid":"GO:0003730","terms_by_termid":{"GO:0003730":null,"GO:0035925":null}}


id: PBO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRP-like ion calcium channel Trp1322","termid":"PBO:0034811"}


id: GO:0014886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of conversion of slow-contracting muscle fibers to a faster character. This may involve increasing of contractile rate, fast myosin gene induction, increase in glycolytic metabolic properties, altered electrophysiology and altered innervation. This process also regulates skeletal muscle adapatation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle adaptation","termid":"GO:0014733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transition between slow and fast fiber","synonyms":[{"name":"transition between slow and fast fibre","type":"exact"},{"name":"transition slow-fast fiber","type":"exact"},{"name":"transition slow-fast fibre","type":"exact"}],"termid":"GO:0014886"}


id: GO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydropterin + H2O = 7,8-dihydrolumazine + NH3.","definition_xrefs":["GOC:jl","PMID:19567870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dihydropterin deaminase activity","termid":"GO:0004153"}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: PBO:0066683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 1","termid":"PBO:0066683"}


id: PBO:0049770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 8","termid":"PBO:0049770"}


id: PR:O74309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm9 gene.","definition_xrefs":["UniProtKB:O74309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator slm9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.03","synonyms":[{"name":"Spom972h-slm9","type":"exact"}],"termid":"PR:O74309"}


id: PBO:0077069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3 pseudogene 1","termid":"PBO:0077069"}


id: PBO:0040120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 7","termid":"PBO:0040120"}


id: MOD:01851
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form S-(2-aminovinyl)-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminovinyl)-cysteine","synonyms":[{"name":"2-amino-3-([2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"}],"termid":"MOD:01851"}


id: GO:0140326
data:
  {"annotated_genes":["SJAG_00018","SJAG_02943","SJAG_01731","SJAG_00587","SJAG_02897","SJAG_02581","SJAG_02114","SJAG_05209","SJAG_03050","SJAG_02516","SJAG_01095","SJAG_00589","SJAG_02132","SJAG_01945","SJAG_03774","SJAG_00669","SJAG_02957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86588,86589,86590,86591,86592,86593,86594,86595,86596,98359,101077],"is_not":false,"summary":null,"term":"GO:0140326"},{"annotations":[108560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140333"},{"annotations":[90477,93969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[95498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[93971,90479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[96219,93972,90480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090554"},{"annotations":[90481,93973,95500,96220,108501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[95501,108503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"},{"annotations":[93974,95502,90482,108504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090556"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of lipids from one membrane leaflet to the other, driven by ATP hydrolysis. This includes flippases and floppases.","definition_xrefs":["PMID:16828084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03774":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0140303","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled intramembrane lipid transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008557","Reactome:R-HSA-939763","EC:7.6.2.1","MetaCyc:3.6.3.1-RXN","GO:0004012","Reactome:R-HSA-947591"],"synonyms":[{"name":"ATPase-coupled phospholipid transporter activity","type":"related"},{"name":"ATPase-dependent phospholipid transporter activity","type":"related"},{"name":"aminophospholipid-transporting ATPase","type":"related"},{"name":"phospholipid flippase activity","type":"narrow"},{"name":"phospholipid translocating ATPase activity","type":"related"},{"name":"phospholipid-translocating ATPase activity","type":"related"},{"name":"phospholipid-transporting ATPase activity","type":"related"}],"termid":"GO:0140326","terms_by_termid":{"GO:0090554":null,"GO:0090555":null,"GO:0090556":null,"GO:0140326":null,"GO:0140333":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: FYPO:0006957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidinol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular histidinol level","synonyms":[{"name":"increased cellular L-histidinol level","type":"exact"},{"name":"increased cellular histidinol level during mitotic cell cycle","type":"related"},{"name":"increased cellular histidinol level during vegetative growth","type":"exact"},{"name":"increased histidinol accumulation","type":"related"}],"termid":"FYPO:0006957"}


id: GO:0039696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription process that uses viral RNA as a template.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-templated viral transcription","termid":"GO:0039696"}


id: PBO:0071035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 37","termid":"PBO:0071035"}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: PBO:0065671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRS antisense RNA 1","termid":"PBO:0065671"}


id: PBO:0053588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 613","termid":"PBO:0053588"}


id: PBO:0078191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-1","termid":"PBO:0078191"}


id: PBO:0036554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant C2 domain protein, human FAM102A and FAM102B ortholog","termid":"PBO:0036554"}


id: GO:0043929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle), as part of the double layer follicle stage of oogenesis.","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ovarian follicle growth","termid":"GO:0001545"},{"relation_name":"part_of","term_name":"double layer follicle stage","termid":"GO:0048161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth involved in double layer follicle stage","synonyms":[{"name":"primary ovarian follicle growth during double layer follicle stage","type":"related"}],"termid":"GO:0043929"}


id: GO:0004616
data:
  {"annotated_genes":["SJAG_03852"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107584],"is_not":false,"summary":null,"term":"GO:0004616"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.","definition_xrefs":["EC:1.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phosphogluconate dehydrogenase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10116","Reactome:R-HSA-71299","MetaCyc:RXN-9952"],"synonyms":[{"name":"6-phospho-D-gluconate dehydrogenase activity","type":"related"},{"name":"6-phospho-D-gluconate:NADP+ 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"6-phosphogluconate dehydrogenase (decarboxylating)","type":"related"},{"name":"6-phosphogluconic carboxylase activity","type":"related"},{"name":"6-phosphogluconic dehydrogenase activity","type":"broad"},{"name":"6PGD activity","type":"related"},{"name":"phosphogluconic acid dehydrogenase activity","type":"related"}],"termid":"GO:0004616","terms_by_termid":{"GO:0004616":null}}


id: PBO:0063940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 1","termid":"PBO:0063940"}


id: PBO:0029703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_nitrogen_starvation","termid":"PBO:0029703"}


id: PBO:0053947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1250","termid":"PBO:0053947"}


id: PBO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q2, polyprenyltransferase","termid":"PBO:0043657"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: GO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=3 symmetry. The T=3 capsid is composed of 12 pentameric and 20 hexameric capsomeres.","definition_xrefs":["VZ:806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=3 icosahedral viral capsid","termid":"GO:0039617"}


id: PBO:0028054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_horsetail_movement","termid":"PBO:0028054"}


id: PBO:0079088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-1","termid":"PBO:0079088"}


id: GO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"group III metabotropic glutamate receptor activity","termid":"GO:0001642"}


id: GO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"positive regulation of cell killing","termid":"GO:0031343"},{"relation_name":"positively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"activation of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"positive regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"positive regulation of leucocyte mediated cytotoxicity","type":"exact"},{"name":"stimulation of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"up regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"up-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"upregulation of leukocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001912"}


id: GO:0009331
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of sn-glycerol 3-phosphate to dihydroxyacetone phosphate, with concurrent reduction of flavin adenine dinucleotide (FAD) to FADH2. In E. coli, the complex is either a GlpA-GlpB-GlpC heterotrimer that functions in anaerobic conditions, or a GlpD homodimer that functions in aerobic conditions.","definition_xrefs":["PMID:18296637","PMID:7576488","PMID:3286606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (FAD) complex","synonyms":[{"name":"aerobic glycerol 3-phosphate dehydrogenase","type":"narrow"},{"name":"anaerobic glycerol-3-phosphate dehydrogenase","type":"narrow"},{"name":"glycerol-3-phosphate dehydrogenase complex","type":"broad"}],"termid":"GO:0009331"}


id: PBO:0088047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme variant; involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088047"}


id: PBO:0031264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_G2/M_transition_of_mitotic_cell_cycle","termid":"PBO:0031264"}


id: PBO:0067192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 254, pseudogene","termid":"PBO:0067192"}


id: PBO:0013439
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor Overexpression Elongated","termid":"PBO:0013439"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: PBO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein R pseudogene 2","termid":"PBO:0050444"}


id: PBO:0027861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_S_phase","termid":"PBO:0027861"}


id: PBO:0046623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 4","termid":"PBO:0046623"}


id: GO:0198738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that mediates the transfer of information from one cell to another, medaited by a wnt family protein ligand. This process includes wnt signal transduction in the receiving cell, release of wnt ligand from a secreting cell as well as any processes that actively facilitate wnt transport and presentation to receptor on the receiving cell.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-cell signaling by wnt (obsolete GO:0198738)","termid":"GO:0198738"}


id: PBO:0043178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIRBP antisense RNA 1","termid":"PBO:0043178"}


id: GO:0032343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aldosterone, a corticosteroid hormone that is produced by the zona glomerulosa of the adrenal cortex and regulates salt (sodium and potassium) and water balance.","definition_xrefs":["PMID:16527843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineralocorticoid catabolic process","termid":"GO:0006712"},{"relation_name":"is_a","term_name":"C21-steroid hormone catabolic process","termid":"GO:0008208"},{"relation_name":"is_a","term_name":"aldosterone metabolic process","termid":"GO:0032341"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"aldosterone catabolic process","termid":"GO:0032343"}


id: GO:1900313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltohexaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hexasaccharide transport","termid":"GO:1900298"},{"relation_name":"is_a","term_name":"regulation of maltohexaose transport","termid":"GO:1900312"},{"relation_name":"negatively_regulates","term_name":"maltohexaose transport","termid":"GO:2001103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of maltohexaose transport","synonyms":[{"name":"down regulation of maltohexaose transport","type":"exact"},{"name":"down-regulation of maltohexaose transport","type":"exact"},{"name":"downregulation of maltohexaose transport","type":"exact"},{"name":"inhibition of maltohexaose transport","type":"narrow"}],"termid":"GO:1900313"}


id: GO:0021972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed after decussation through the spinal cord in response to a combination of attractive and repulsive cues.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dgh","GOC:cls","PMID:9878731","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through spinal cord","synonyms":[{"name":"corticospinal neuron axon pathfinding through spinal cord","type":"exact"}],"termid":"GO:0021972"}


id: PBO:0051596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22","termid":"PBO:0051596"}


id: SO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fusion gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"fusion_gene","termid":"SO:0000287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_fusion_gene","synonyms":[{"name":"engineered fusion gene","type":"exact"}],"termid":"SO:0000288"}


id: PBO:0038818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 21 pseudogene 1","termid":"PBO:0038818"}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: GO:0016826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid sulfur-nitrogen bond.","definition_xrefs":["EC:3.10.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid sulfur-nitrogen bonds","synonyms":[{"name":"hydrolase activity, acting on acid sulphur-nitrogen bonds","type":"exact"}],"termid":"GO:0016826"}


id: GO:0120271
data:
  {"annotated_genes":["SJAG_03883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85853],"is_not":false,"summary":null,"term":"GO:0120271"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selective degradation of meiosis-specific nuclear transcribed transcripts during vegetative growth, by a mechanism that requires determinant of selective removal (DSR) sequences in the targeted mRNAs and involves a YTH family protein.","definition_xrefs":["PMID:24920274","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0120270"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","termid":"GO:0033621"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120271","terms_by_termid":{"GO:0120271":null}}


id: PBO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 8","termid":"PBO:0060020"}


id: PBO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit Not3/5","termid":"PBO:0036356"}


id: GO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R.","definition_xrefs":["EC:2.4.1.144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:15509","MetaCyc:2.4.1.144-RXN","Reactome:R-HSA-975926"],"synonyms":[{"name":"GnTIII activity","type":"related"},{"name":"N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:beta-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-4-acetylglucosaminyltransferase III activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta4-acetylglucosaminyltransferase III","type":"related"}],"termid":"GO:0003830"}


id: PBO:0035759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation_during_vegetative_growth","termid":"PBO:0035759"}


id: _global:relation_between_physical_entity_and_a_process_or_stage
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relation_between_physical_entity_and_a_process_or_stage","secondary_identifiers":["RO:0002487"],"termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}


id: PBO:0086713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant has long chronological lifespan; has homology to Staphylococcus aureus nuclease; GFP-fusion protein localizes to mitochondria; is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086713"}


id: PBO:0039465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13B","termid":"PBO:0039465"}


id: PBO:0088336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc exporter, ZIP family Zip3","termid":"PBO:0088336"}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["EC:2.7.7.77","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: GO:1904617
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91334,101144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin binding.","definition_xrefs":["GOC:TermGenie","GOC:mr","GO_REF:0000059","PMID:8621557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of actin binding","termid":"GO:1904616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of actin binding","type":"exact"},{"name":"down regulation of membrane associated actin binding","type":"narrow"},{"name":"down-regulation of actin binding","type":"exact"},{"name":"down-regulation of membrane associated actin binding","type":"narrow"},{"name":"downregulation of actin binding","type":"exact"},{"name":"downregulation of membrane associated actin binding","type":"narrow"},{"name":"inhibition of actin binding","type":"narrow"},{"name":"inhibition of membrane associated actin binding","type":"narrow"},{"name":"negative regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904617","terms_by_termid":{"GO:1904530":null}}


id: FYPO:0001788
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cytoplasm","synonyms":[{"name":"normal protein localisation to cytoplasm","type":"exact"},{"name":"normal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0001788"}


id: GO:0009314
data:
  {"annotated_genes":["SJAG_00863","SJAG_02199","SJAG_00272","SJAG_04791","SJAG_01648","SJAG_04190","SJAG_01010","SJAG_02334","SJAG_01262","SJAG_02818","SJAG_03898","SJAG_05197","SJAG_02828","SJAG_02200","SJAG_05242","SJAG_04150","SJAG_02182","SJAG_00729","SJAG_02860","SJAG_04877","SJAG_00814","SJAG_00208"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100002],"is_not":false,"summary":null,"term":"GO:0009314"},{"annotations":[65669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[115565,115564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[105108,98842,91280,100925],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[93167,84088,92062,106825,89702,102983,91105,100242,90014,107426,85642,108833,91314,108280,101936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.","definition_xrefs":["GOC:jl","Wikipedia:Electromagnetic_radiation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to radiation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"response to electromagnetic radiation stimulus","type":"exact"},{"name":"response to radiation stimulus","type":"exact"}],"termid":"GO:0009314","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: GO:0033194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydroperoxide stimulus. Hydroperoxides are monosubstitution products of hydrogen peroxide, HOOH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hydroperoxide","termid":"GO:0033194"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: PR:Q9P7T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.17 gene.","definition_xrefs":["UniProtKB:Q9P7T9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.17","synonyms":[{"name":"Spom972h-SPAC977.17","type":"exact"}],"termid":"PR:Q9P7T9"}


id: GO:0005998
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115012],"is_not":false,"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylulose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:XYLCAT-PWY"],"synonyms":[{"name":"xylulose degradation","type":"exact"},{"name":"xylulose breakdown","type":"exact"},{"name":"xylulose catabolism","type":"exact"}],"termid":"GO:0005998","terms_by_termid":{"GO:0005998":null}}


id: PBO:0059882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 5","termid":"PBO:0059882"}


id: PBO:0083766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential N-acetylglucosamine-phosphate mutase; converts GlcNAc-6-P to GlcNAc-1-P, which is a precursor for the biosynthesis of chitin and for the formation of N-glycosylated mannoproteins and glycosylphosphatidylinositol anchors","termid":"PBO:0083766"}


id: PBO:0030530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030530"}


id: PBO:0081820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 737","termid":"PBO:0081820"}


id: PBO:0082054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease; component of the mitochondrial degradosome along with the ATP-dependent RNA helicase Suv3p; the degradosome associates with the ribosome and mediates turnover of aberrant or unprocessed RNAs","termid":"PBO:0082054"}


id: PBO:0079204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR2 ribosome maturation factor","termid":"PBO:0079204"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: GO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell differentiation","synonyms":[{"name":"cytotoxic T cell development","type":"related"},{"name":"cytotoxic T lymphocyte selection","type":"exact"},{"name":"cytotoxic T-cell selection","type":"exact"},{"name":"cytotoxic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045065"}


id: PBO:0052331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671 antisense RNA 1","termid":"PBO:0052331"}


id: GO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of peptide hormone processing. Peptide hormone processing is the generation of a mature peptide hormone by posttranslational processing of a prohormone.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"regulation of peptide hormone processing","termid":"GO:0060568"},{"relation_name":"negatively_regulates","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"negative regulation of peptide hormone processing","termid":"GO:0060570"}


id: FYPO:0008051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is decreased.","definition_xrefs":["PMID:28572513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased ubiquitin ligase activity","termid":"FYPO:0008051"}


id: PBO:0003141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate N-acetyltransferase (predicted)","termid":"PBO:0003141"}


id: GO:0017103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.","definition_xrefs":["RHEA:14209","EC:2.7.7.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTP-monosaccharide-1-phosphate uridylyltransferase activity","termid":"GO:0051748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UTP:galactose-1-phosphate uridylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00502","MetaCyc:UTPHEXPURIDYLYLTRANS-RXN","GO:0003982"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDPgalactose pyrophosphorylase activity","type":"related"},{"name":"UTP-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:alpha-D-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UTP:hexose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"alpha-D-galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridyltransferase activity","type":"related"},{"name":"galactose 1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"uridine diphosphate galactose pyrophosphorylase activity","type":"related"},{"name":"uridine diphosphogalactose pyrophosphorylase activity","type":"related"}],"termid":"GO:0017103"}


id: GO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of enamel mineralization, the deposition of calcium salts in tooth enamel.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tooth mineralization","termid":"GO:0070171"},{"relation_name":"is_a","term_name":"regulation of enamel mineralization","termid":"GO:0070173"},{"relation_name":"negatively_regulates","term_name":"enamel mineralization","termid":"GO:0070166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of enamel mineralization","termid":"GO:0070174"}


id: _global:preceded_by
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"x is preceded by y if and only if the time point at which y ends is before or equivalent to the time point at which x starts. Formally: x preceded by y iff ω(y) <= α(x), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"ends_after","termid":"_global:ends_after"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preceded_by","secondary_identifiers":["BFO:0000062"],"termid":"_global:preceded_by"}


id: PBO:0011074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase (predicted)","termid":"PBO:0011074"}


id: PR:Q9P7W3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1703.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.07","synonyms":[{"name":"ATP-citrate (pro-S-)-lyase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC1703.07","type":"exact"},{"name":"citrate cleavage enzyme subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7W3"}


id: PBO:0066871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 171","termid":"PBO:0066871"}


id: PBO:0070136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 50 pseudogene","termid":"PBO:0070136"}


id: PBO:0083557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene INP52; identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0083557"}


id: PBO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin associated protein","termid":"PBO:0045665"}


id: GO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase in the context of cell wall biogenesis, the assembly and arrangement of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity involved in cell wall organization or biogenesis (obsolete GO:0000199)","synonyms":[{"name":"activation of MAPK activity involved in cell wall biogenesis","type":"narrow"},{"name":"activation of MAPK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPK activity","type":"exact"}],"termid":"GO:0000199"}


id: GO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-27p28 subunit (product of the IL27 gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:19161428","PMID:15999093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interleukin-27 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-27 complex","type":"exact"},{"name":"IL27","type":"narrow"},{"name":"p28","type":"narrow"}],"termid":"GO:0070744"}


id: GO:0035383
data:
  {"annotated_genes":["SJAG_02158","SJAG_02769","SJAG_03349","SJAG_03731","SJAG_04895","SJAG_03909","SJAG_03313","SJAG_01187","SJAG_00982","SJAG_01139","SJAG_00947","SJAG_01989","SJAG_03715","SJAG_03471","SJAG_00902","SJAG_02380","SJAG_03813","SJAG_01524","SJAG_01474","SJAG_03064","SJAG_00866","SJAG_03290","SJAG_02006","SJAG_04865","SJAG_02741","SJAG_01402","SJAG_04499","SJAG_04007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89295,94412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[95054,104590,114451,110243,91050,83505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[111760,87486,110350,94077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006084"},{"annotations":[92858,104710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006637"},{"annotations":[92633,110907,90495,84771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[103473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[109427,101595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"},{"annotations":[94391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[107376,111478],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[110974,85980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a thioester, a compound of general formula RC(=O)SR' in which the linking oxygen in an ester is replaced by a sulfur atom. They are the product of esterification between a carboxylic acid and a thiol.","definition_xrefs":["Wikipedia:Thioester","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_00982":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01524":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03349":null,"SJAG_03471":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_03813":null,"SJAG_03909":null,"SJAG_04007":null,"SJAG_04499":null,"SJAG_04865":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thioester metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thioester metabolism","type":"exact"}],"termid":"GO:0035383","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0006104":null,"GO:0006637":null,"GO:0019287":null,"GO:0019427":null,"GO:0035336":null,"GO:0035338":null,"GO:1990181":null,"GO:2001211":null,"GO:2001295":null}}


id: GO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the W-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear tungsten ion (W) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"W-molybdopterin cofactor metabolic process","synonyms":[{"name":"Moco metabolic process","type":"broad"},{"name":"Moco metabolism","type":"broad"},{"name":"W-molybdopterin cofactor metabolism","type":"exact"}],"termid":"GO:0042046"}


id: PBO:0058215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4507","termid":"PBO:0058215"}


id: PBO:0038807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 11","termid":"PBO:0038807"}


id: GO:1903906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plasma membrane raft polarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane raft polarization","termid":"GO:0044858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane raft polarization","termid":"GO:1903906"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: FYPO:0003738
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115420],"is_not":false,"summary":null,"term":"FYPO:0003738"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested when cells have condensed chromosomes, but show no other signs of having entered mitosis or M phase, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle arrest with condensed chromosomes during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0003738","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003738":null}}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: PBO:0039339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, pseudogene","termid":"PBO:0039339"}


id: PATO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000933 red light sensitivity (obsolete PATO:0000933)","termid":"PATO:0000933"}


id: FYPO:0003260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used is decreased.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA splicing at cryptic splice sites","synonyms":[{"name":"decreased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"decreased RNA splicing of cryptic introns","type":"exact"},{"name":"reduced RNA splicing at cryptic splice sites","type":"exact"}],"termid":"FYPO:0003260"}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: PBO:0088519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1","termid":"PBO:0088519"}


id: FYPO:0004403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of JM216 (also called satraplatin) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to JM216","synonyms":[{"name":"resistance to JM216 during mitotic cell cycle","type":"related"},{"name":"resistance to JM216 during vegetative growth","type":"exact"},{"name":"resistance to satraplatin","type":"exact"},{"name":"resistant to JM216","type":"exact"}],"termid":"FYPO:0004403"}


id: GO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Unc13b (or orthologs thereof).","definition_xrefs":["PMID:8999968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Unc13 complex","synonyms":[{"name":"SNARE complex (Snap25, Syt1, Unc13b, Vamp2, Stx1b2, Stx1a)","type":"narrow"},{"name":"Snap25-Syt1-Unc13b-Vamp2-Stx1b2-Stx1a complex","type":"narrow"}],"termid":"GO:0070768"}


id: PBO:0108909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 3","termid":"PBO:0108909"}


id: GO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanosine pentaphosphate biosynthetic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine pentaphosphate anabolism","type":"exact"},{"name":"guanosine pentaphosphate biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate formation","type":"exact"},{"name":"guanosine pentaphosphate synthesis","type":"exact"}],"termid":"GO:0015973"}


id: PBO:0071799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P RNA component H1, 3 pseudogene","termid":"PBO:0071799"}


id: PBO:0054305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1697","termid":"PBO:0054305"}


id: PBO:0004323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf22","termid":"PBO:0004323"}


id: GO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: PBO:0049402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1ANB-GUCA1A readthrough","termid":"PBO:0049402"}


id: GO:0098711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iron ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:mah","PMID:8321236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0098771","GO:0055085"],"is_obsolete":false,"name":"iron ion import across plasma membrane","secondary_identifiers":["GO:0098707","GO:0097459","GO:0097460"],"synonyms":[{"name":"ferrous ion import into cell","type":"related"},{"name":"ferrous iron import across plasma membrane","type":"related"},{"name":"ferrous iron import into cell","type":"related"},{"name":"iron import into cell","type":"related"},{"name":"iron ion import into cell","type":"exact"}],"termid":"GO:0098711"}


id: GO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex found in mammals that transfers tail-anchored (TA) proteins from SGTA to GET3 (ASNA1/TRC4) for targeting to the endoplasmic reticulum membrane. Also chaperones polypeptides from the endoplasmic reticulum retrotranslocation machinery to the proteasome, maintaining the solubility of substrates to improve ER-associated protein degradation (ERAD). Consists of BAG6 (BAT3) and its cofactors GET4 (TRC35) and UBL4A.","definition_xrefs":["PMID:21636303","GOC:bm","PMID:20676083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"BAT3 complex","synonyms":[{"name":"BAG6-UBL4A-TRC35 complex","type":"exact"},{"name":"BAT3-TRC35-UBL4A complex","type":"related"},{"name":"Bag6 complex","type":"exact"}],"termid":"GO:0071818"}


id: PBO:0029869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation","termid":"PBO:0029869"}


id: PBO:0044128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 14, pseudogene","termid":"PBO:0044128"}


id: PBO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F associated phosphoprotein","termid":"PBO:0045734"}


id: PBO:0004813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase subunit Arg5 (predicted)","termid":"PBO:0004813"}


id: PBO:0079002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 2-1","termid":"PBO:0079002"}


id: SO:0000434
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of the target DNA that is duplicated when a transposable element or phage inserts; usually found at each end the insertion.","direct_ancestors":[{"relation_name":"derives_from","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"direct_repeat","termid":"SO:0000314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target_site_duplication","synonyms":[{"name":"target site duplication","type":"exact"}],"termid":"SO:0000434"}


id: PBO:0084350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the nuclear mRNA cap-binding protein complex; interacts with Npl3p to carry nuclear poly(A)+ mRNA to cytoplasm; also involved in nuclear mRNA degradation and telomere maintenance; orthologous to mammalian CBP80","termid":"PBO:0084350"}


id: PBO:0059556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Tyr (UAU/C)","termid":"PBO:0059556"}


id: GO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the embryonic heart tube by the cells of the heart field along a linear axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube formation","termid":"GO:0003144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube formation via epithelial folding","termid":"GO:0003145"}


id: PBO:0045741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF3 antisense RNA 1","termid":"PBO:0045741"}


id: PR:O94364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wpl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wings apart-like protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.17c","synonyms":[{"name":"Spom972h-wpl1","type":"exact"}],"termid":"PR:O94364"}


id: PBO:0056299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 beta pseudogene 1","termid":"PBO:0056299"}


id: PBO:0086940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication","termid":"PBO:0086940"}


id: GO:0070763
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of homodimer of the Notch ligand Delta1.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Delta1 complex","synonyms":[{"name":"Delta1 homodimer complex","type":"exact"}],"termid":"GO:0070763"}


id: PBO:0087910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA","termid":"PBO:0087910"}


id: GO:0070184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-tRNA aminoacylation","termid":"GO:0006437"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0010467","GO:0006399","GO:0140053"],"is_obsolete":false,"name":"mitochondrial tyrosyl-tRNA aminoacylation","termid":"GO:0070184"}


id: PBO:0070662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 33","termid":"PBO:0070662"}


id: FYPO:0008178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at normal levels (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal centromeric inner repeat transcript level","termid":"FYPO:0008178"}


id: FYPO:0005335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through mitotic cell cycle arrest at the mitotic G2/M phase transition occurs abnormally when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:26804466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose starvation","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose deprivation","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during glucose limitation","type":"related"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during glucose depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during glucose starvation","type":"exact"},{"name":"abolished mitotic G2/M phase transition during glucose starvation","type":"related"}],"termid":"FYPO:0005335"}


id: GO:0070390
data:
  {"annotated_genes":["SJAG_04656","SJAG_00298","SJAG_04472","SJAG_04347","SJAG_00641"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68987,97982,107753,113391,114010],"is_not":false,"summary":null,"term":"GO:0070390"}]},"cv_name":"cellular_component","definition":"A protein complex that couples SAGA-dependent gene expression to mRNA export at the inner side of the nuclear pore complex (NPC). The TREX-2 complex is tethered to the inner side of the NPC via the nucleoporins Nup1 and Nup60; in S. cerevisiae it contains Sac3p, Thp1p, Sem1, Sus1p and Cdc31p.","definition_xrefs":["GOC:dgf","PMID:17786152","GOC:mah","PMID:19289793","PMID:28334829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_00641":null,"SJAG_04347":null,"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transcription export complex 2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sac3-Thp1-Sus1-Sem1-Cdc31 complex","type":"exact"},{"name":"TREX-2 complex","type":"exact"}],"termid":"GO:0070390","terms_by_termid":{"GO:0070390":null}}


id: GO:0140662
data:
  {"annotated_genes":["SJAG_01664","SJAG_02926","SJAG_02378","SJAG_01186","SJAG_01615","SJAG_04121","SJAG_00609","SJAG_04055","SJAG_01510","SJAG_00564","SJAG_02875","SJAG_03320","SJAG_01002","SJAG_04511","SJAG_00790","SJAG_03237","SJAG_03570","SJAG_01874","SJAG_00447"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64007,83991,84411,84822,84823,84921,88172,88382,89139,94598,95270,96737,97847,98853,100686,102221,103339,105220,107360,111504,111505],"is_not":false,"summary":null,"term":"GO:0140662"}]},"cv_name":"molecular_function","definition":"Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis.","definition_xrefs":["PMID:27365453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone","termid":"GO:0044183"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00564":null,"SJAG_00609":null,"SJAG_00790":null,"SJAG_01002":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01664":null,"SJAG_01874":null,"SJAG_02378":null,"SJAG_02875":null,"SJAG_02926":null,"SJAG_03237":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04055":null,"SJAG_04121":null,"SJAG_04511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein folding chaperone","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0140662","terms_by_termid":{"GO:0140662":null}}


id: PR:O94497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C18E5.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.07","synonyms":[{"name":"Spom972h-SPBC18E5.07","type":"exact"}],"termid":"PR:O94497"}


id: GO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the endoplasmic reticulum lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["PMID:3458237","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"GDP-fucose import into endoplasmic reticulum lumen","synonyms":[{"name":"GDP-fucose import into endoplasmic reticulum","type":"exact"},{"name":"GDP-fucose transport across endoplasmic reticulum membrane","type":"exact"},{"name":"GDP-fucose transport into endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0036084"}


id: PBO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-box protein 1","termid":"PBO:0001042"}


id: PBO:0049366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1 pseudogene 1","termid":"PBO:0049366"}


id: SO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding arginyl tRNA (SO:0000255).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine_tRNA_primary_transcript","synonyms":[{"name":"arginine tRNA primary transcript","type":"exact"}],"termid":"SO:0000212"}


id: PBO:0058485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5680","termid":"PBO:0058485"}


id: PBO:0052287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like ECH associated protein 1","termid":"PBO:0052287"}


id: GO:0008475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2.","definition_xrefs":["EC:1.14.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine 5-dioxygenase activity","termid":"GO:0070815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"procollagen-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1981104","MetaCyc:PROCOLLAGEN-LYSINE-5-DIOXYGENASE-RXN","RHEA:16569"],"synonyms":[{"name":"collagen lysine hydroxylase activity","type":"related"},{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"lysylprotocollagen dioxygenase activity","type":"related"},{"name":"procollagen-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase activity","type":"related"},{"name":"protocollagen lysine dioxygenase activity","type":"related"},{"name":"protocollagen lysine hydroxylase activity","type":"related"},{"name":"protocollagen lysyl hydroxylase activity","type":"related"}],"termid":"GO:0008475"}


id: PBO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(p12.1)","termid":"PBO:0047948"}


id: PBO:0057711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1297","termid":"PBO:0057711"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_03300","SJAG_04768","SJAG_03048","SJAG_00471","SJAG_04055","SJAG_04855","SJAG_03745","SJAG_00335","SJAG_00082","SJAG_03161","SJAG_04187","SJAG_01374","SJAG_01186","SJAG_01837","SJAG_03543","SJAG_04601","SJAG_01805","SJAG_00302","SJAG_04140","SJAG_00178","SJAG_01408","SJAG_04645"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85066,98293,84811,100308,110894,111487,95061,101377,86051,88280,100217,107196,108049,108597,101738,111486,83570,84810,108596,87000,112682,108598,89837,98373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["GOC:mah","PMID:11121744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao120573470","Wikipedia:Inclusion_bodies"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: PBO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 9","termid":"PBO:0050971"}


id: PBO:0068458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 34, pseudogene","termid":"PBO:0068458"}


id: GO:0004555
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107518],"is_not":false,"summary":null,"term":"GO:0004555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose.","definition_xrefs":["PMID:19897915","RHEA:32675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TREHALA-RXN","EC:3.2.1.28","Reactome:R-HSA-188985"],"synonyms":[{"name":"alpha,alpha-trehalose glucohydrolase activity","type":"related"}],"termid":"GO:0004555","terms_by_termid":{"GO:0004555":null}}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:go_curators","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PBO:0084507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific subunit of the t-SNARE complex; required for prospore membrane formation during sporulation; similar to but not functionally redundant with Sec9p; binds to phosphatidic acid; SNAP-25 homolog","termid":"PBO:0084507"}


id: PBO:0076646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBX2 antisense RNA 1","termid":"PBO:0076646"}


id: GO:0170003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme B from one side of a membrane to the other.","definition_xrefs":["PMID:15369674","PMID:9657107","PMID:20610401","PMID:32121449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme transmembrane transporter activity","termid":"GO:0015232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"heme B transmembrane transporter activity","secondary_identifiers":["RHEA:75443"],"termid":"GO:0170003"}


id: SO:0002340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An abundant small nuclear RNA that, together with associated cellular proteins, regulates the activity of the positive transcription elongation factor b (P-TEFb). It is often described in literature as similar to a snRNA, except of longer length.","definition_xrefs":["PMID:21853533","PMID:27369380","PMID:19246988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_7SK","synonyms":[{"name":"7SK RNA","type":"exact"},{"name":"RNA 7SK","type":"exact"}],"termid":"SO:0002340"}


id: GO:0015293
data:
  {"annotated_genes":["SJAG_02958","SJAG_03960","SJAG_03401","SJAG_04506","SJAG_02779","SJAG_04714","SJAG_03595","SJAG_03820","SJAG_04905","SJAG_02780","SJAG_03608","SJAG_03606","SJAG_00057","SJAG_04673","SJAG_01406","SJAG_04068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98997,106653,72163,113214,110174,74969,88533,110181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[88614,94085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[101698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[88108,88102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[91584,84521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["PMID:10839820","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotransporter activity","type":"broad"},{"name":"porter activity","type":"broad"},{"name":"symport","type":"related"}],"termid":"GO:0015293","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0015379":null,"GO:0015505":null,"GO:0034216":null,"GO:0097434":null}}


id: PBO:0041454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 67","termid":"PBO:0041454"}


id: GO:0031505
data:
  {"annotated_genes":["SJAG_00667","SJAG_01835","SJAG_01290","SJAG_02649","SJAG_02192","SJAG_03631","SJAG_04868","SJAG_04620","SJAG_01321","SJAG_00218","SJAG_01017","SJAG_01888","SJAG_03646","SJAG_01171","SJAG_04238","SJAG_00974","SJAG_00163","SJAG_04462","SJAG_02590","SJAG_04483","SJAG_05001","SJAG_02446","SJAG_04073","SJAG_03295","SJAG_03013","SJAG_01227","SJAG_03444","SJAG_02718","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83525,84146,84356,85400,86652,87630,90266,91149,94687,98476,103778,104391,105301,109366],"is_not":false,"summary":null,"term":"GO:0031505"},{"annotations":[84776,84286,87815,86307,113777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[96169,107321,90071,97965,84355,85163,97966,104070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[101341,106984,83671],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"is_a","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00218":null,"SJAG_00667":null,"SJAG_00974":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01181":null,"SJAG_01227":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01835":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02649":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03295":null,"SJAG_03444":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_04073":null,"SJAG_04238":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04620":null,"SJAG_04868":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan-containing cell wall organization and biogenesis","type":"related"},{"name":"chitin- and beta-glucan-containing cell wall organisation","type":"narrow"},{"name":"chitin- and beta-glucan-containing cell wall organization and biogenesis","type":"narrow"},{"name":"chitin-containing cell wall organization and biogenesis","type":"related"},{"name":"fungal-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0031505","terms_by_termid":{"GO:0030476":null,"GO:0031505":null,"GO:0060237":null,"GO:1904541":null}}


id: GO:0052502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052502)","synonyms":[{"name":"activation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related symbiont MAPK-mediated signal transduction pathway","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont mitogen-activated protein kinase-mediated signal transduction pathway","type":"exact"},{"name":"stimulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"},{"name":"up regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"up-regulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"exact"},{"name":"upregulation by organism of defense-related symbiont MAP kinase-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052502"}


id: PBO:0108922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 2","termid":"PBO:0108922"}


id: PBO:0031835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleolar_morphology","termid":"PBO:0031835"}


id: PBO:0077402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 135","termid":"PBO:0077402"}


id: GO:0005346
data:
  {"annotated_genes":["SJAG_03334","SJAG_04325","SJAG_03452","SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine ribonucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005346","terms_by_termid":{"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0140987":null,"GO:1902557":null}}


id: PATO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A lobed quality inhering in a bearer by virtue of the bearer's being divided into or having two lobes.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/bilobed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lobed","termid":"PATO:0001979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilobed","termid":"PATO:0002214"}


id: GO:0102598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-sandaracopimaradien-3-beta-ol + NADPH + H+ + O2 = oryzalexin D + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.14.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3alpha-hydroxy-ent-sandaracopimardiene 7-beta-monooxygenase activity","secondary_identifiers":["RHEA:41472","MetaCyc:RXN-15382"],"termid":"GO:0102598"}


id: GO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ATP-dependent RNA helicase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host ATP-dependent RNA helicase activity (obsolete GO:0039510)","synonyms":[{"name":"down-regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"downregulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"inhibition by virus of host ATP-dependent RNA helicase activity","type":"narrow"},{"name":"negative regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0039510"}


id: GO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-15 production","termid":"GO:0032658"},{"relation_name":"negatively_regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-15 production","secondary_identifiers":["GO:0045373"],"synonyms":[{"name":"down regulation of interleukin-15 production","type":"exact"},{"name":"down-regulation of interleukin-15 production","type":"exact"},{"name":"downregulation of interleukin-15 production","type":"exact"},{"name":"inhibition of interleukin-15 production","type":"narrow"},{"name":"negative regulation of IL-15 production","type":"exact"},{"name":"negative regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032698"}


id: PBO:0058655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6783","termid":"PBO:0058655"}


id: PBO:0068615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 66, pseudogene","termid":"PBO:0068615"}


id: PBO:0048370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein and VPS9 domains 1","termid":"PBO:0048370"}


id: PBO:0029367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029367"}


id: PBO:0085773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; involved in vesicle formation and incorporation of specific secretory cargo; protein abundance increases in response to DNA replication stress","termid":"PBO:0085773"}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: GO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + H2O + N6-methyl-AMP = IMP + methylamine. Can also use N6-methyl-dAMP as a substrate.","definition_xrefs":["RHEA:16001","PMID:29884623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N6-methyl-AMP deaminase activity","secondary_identifiers":["Reactome:R-HSA-2161187","Reactome:R-HSA-2161195","Reactome:R-HSA-9731661"],"synonyms":[{"name":"MAPDA","type":"exact"},{"name":"N6-mAMP deaminase activity","type":"exact"},{"name":"N6-methyl-AMP/dAMP aminohydrolase","type":"exact"}],"termid":"GO:0062154"}


id: PBO:0053901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1191","termid":"PBO:0053901"}


id: SO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one V-gene, one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_J_cluster","synonyms":[{"name":"V D J cluster","type":"exact"},{"name":"V-D-J-CLUSTER","type":"exact"}],"termid":"SO:0000532"}


id: PBO:0081639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF566 antisense RNA 1","termid":"PBO:0081639"}


id: PBO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub2","termid":"PBO:0016534"}


id: PR:Q9C1W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC713.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1W8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endopolyphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.07c","synonyms":[{"name":"Spom972h-SPBC713.07c","type":"exact"}],"termid":"PR:Q9C1W8"}


id: GO:1905412
data:
  {"annotated_genes":["SJAG_01716","SJAG_01825","SJAG_03591","SJAG_05978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87786,102254,102349,111337],"is_not":false,"summary":null,"term":"GO:1905412"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin loading.","definition_xrefs":["GOC:TermGenie","PMID:26687354","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cohesin loading","termid":"GO:0071923"},{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"negatively_regulates","term_name":"mitotic cohesin loading","termid":"GO:0061780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic cohesin loading","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905412","terms_by_termid":{"GO:1905412":null}}


id: RO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite-of in which the parasite is partially an endoparasite and partially an ectoparasite","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoparasite_of","termid":"RO:0002636"}


id: PR:O94260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nxt3 gene.","definition_xrefs":["UniProtKB:O94260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.11","synonyms":[{"name":"Spom972h-nxt3","type":"exact"}],"termid":"PR:O94260"}


id: PBO:0048245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12F","termid":"PBO:0048245"}


id: GO:0046809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Globular nuclear domains where the transcription and replication of the viral genome occurs. More than one site can be present simultaneously.","definition_xrefs":["PMID:9499108","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"replication compartment","synonyms":[{"name":"RC","type":"exact"}],"termid":"GO:0046809"}


id: PBO:0057174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR325 host gene","termid":"PBO:0057174"}


id: MOD:00257
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to dipyrrolylmethanemethyl-L-cysteine.","definition_xrefs":["PubMed:3196304","RESID:AA0252","PubMed:3421931","PubMed:3042456","Unimod:416","PubMed:8727319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipyrrolylmethanemethyl-L-cysteine","synonyms":[{"name":"3-[5-(3-acetic acid-4-propanoic acid-1-pyrrol-2-yl)methyl-3-acetic acid-4-propanoic acid-1-pyrrol-2-yl]methylthio-2-aminopropanoic acid","type":"exact"},{"name":"(2S)-3-[5-[4-(2-carboxy)ethyl-3-carboxymethyl-1-pyrrol-2-yl]methyl-4-(2-carboxy)ethyl-3-carboxymethyl-1-pyrrol-2-yl]methylthio-2-aminopropanoic acid","type":"exact"},{"name":"Dipyrrolylmethanemethyl","type":"related"},{"name":"MOD_RES S-(dipyrrolylmethanemethyl)cysteine","type":"exact"},{"name":"dipyrrole cofactor","type":"exact"},{"name":"dipyrrolylmethanemethyl","type":"related"},{"name":"dipyrrolylmethanemethyl-L-cysteine","type":"exact"},{"name":"dipyrrolylmethyl-L-cysteine","type":"exact"},{"name":"dipyrromethane cofactor","type":"exact"},{"name":"pyrromethane cofactor","type":"exact"}],"termid":"MOD:00257"}


id: FYPO:0004954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more prospore membrane than normal. Excess prospore membrane may take the form of bubble-like structures continuous with the rest of the membrane.","definition_xrefs":["PomBase:mah","PMID:17951524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal prospore membrane","termid":"FYPO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"excess prospore membrane present","synonyms":[{"name":"excess forespore membrane present","type":"exact"},{"name":"forespore membrane bubble formation","type":"related"},{"name":"prospore membrane present in greater amount","type":"exact"}],"termid":"FYPO:0004954"}


id: GO:0050265
data:
  {"annotated_genes":["SJAG_02370","SJAG_02383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86841,87720],"is_not":false,"summary":null,"term":"GO:0050265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["MetaCyc:RNA-URIDYLYLTRANSFERASE-RXN","EC:2.7.7.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"RNA uridylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14785","Reactome:R-HSA-8941312"],"synonyms":[{"name":"TUT activity","type":"related"},{"name":"UTP:RNA uridylyltransferase activity","type":"exact"},{"name":"poly(U) polymerase activity","type":"exact"},{"name":"polynucleotide uridylyltransferase activity","type":"exact"},{"name":"terminal uridylyltransferase activity","type":"related"}],"termid":"GO:0050265","terms_by_termid":{"GO:0050265":null}}


id: PR:O94550
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prohibitin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04636","PANTHER:PTHR23222:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.16","secondary_identifiers":["UniProtKB:O94550"],"synonyms":[{"name":"Spom972h-PHB2","type":"exact"}],"termid":"PR:O94550"}


id: GO:0052088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the jasmonic acid-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont defense to host-produced jasmonic acid","secondary_identifiers":["GO:0052082","GO:0052283","GO:0052443","GO:0052267","GO:0052271","GO:0052073","GO:0052266","GO:0052069","GO:0052068"],"synonyms":[{"name":"activation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"activation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"activation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"down regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"down-regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"downregulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"induction by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"induction by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"inhibition by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"modulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by organism of host JA-mediated defense response","type":"narrow"},{"name":"modulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by organism of jasmonic acid-mediated defense response of other organism involved in symbiotic interaction","type":"narrow"},{"name":"negative regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"negative regulation by symbiont of host jasmonic acid-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"positive regulation by organism of defense-related jasmonic acid-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"narrow"},{"name":"positive regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"stimulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"suppression by organism of host JA-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host jasmonic acid-mediated defense response","type":"related"},{"name":"up regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"up-regulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host SA-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by organism of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"},{"name":"upregulation by symbiont of defense-related host jasmonic acid-mediated signal transduction pathway","type":"narrow"}],"termid":"GO:0052088"}


id: GO:0061435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from a mobile element promoter.","definition_xrefs":["PMID:12230120","GOC:dph","PMID:9271107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription from a mobile element promoter","termid":"GO:0061435"}


id: SO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence is representative of a class of similar sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar","termid":"SO:0000864"}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32610081","PMID:32289254","PMID:36638793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: GO:0010717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"}


id: PBO:0029641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_calcium_ion_during_cellular_hypotonic_response","termid":"PBO:0029641"}


id: PBO:0087098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal lysine methyltransferase; specific for monomethylation of Rpl42ap and Rpl42bp (lysine 40); nuclear SET domain containing protein; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087098"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: PBO:0056084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY75-CD302 readthrough","termid":"PBO:0056084"}


id: PBO:0000570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA (N6-adenosine)-methyltransferase (predicted)","termid":"PBO:0000570"}


id: GO:0140938
data:
  {"annotated_genes":["SJAG_02873","SJAG_00769","SJAG_04574","SJAG_03487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[112512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[112556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[112557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[106490,106491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046974"},{"annotations":[106492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H3 = S-adenosyl-L-homocysteine + a methylated histone H3. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0008276","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone H3 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4827383","Reactome:R-HSA-5244692","Reactome:R-HSA-5634802","Reactome:R-HSA-5638333","Reactome:R-HSA-8936584","Reactome:R-HSA-8936608","Reactome:R-HSA-5159245","Reactome:R-HSA-5661117","Reactome:R-HSA-5649799","Reactome:R-HSA-5205799","Reactome:R-HSA-3788748","Reactome:R-HSA-4827382","Reactome:R-HSA-5634729","Reactome:R-HSA-5638332","Reactome:R-HSA-5649802","Reactome:R-HSA-5634750","Reactome:R-HSA-8937022","Reactome:R-HSA-5637686","Reactome:R-HSA-3788745","Reactome:R-HSA-5638141","Reactome:R-HSA-5638157","Reactome:R-HSA-5649764","Reactome:R-HSA-5649800","Reactome:R-HSA-5649801","Reactome:R-HSA-9842833","Reactome:R-HSA-9844006","Reactome:R-HSA-9844057","Reactome:R-HSA-8937113"],"synonyms":[{"name":"histone H3 methylase activity","type":"exact"},{"name":"histone H3 methylation","type":"related"}],"termid":"GO:0140938","terms_by_termid":{"GO:0042800":null,"GO:0046974":null,"GO:0062122":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: GO:0010026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epidermal cell acquires the specialized features of a trichome cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["PMID:9367433","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome differentiation","secondary_identifiers":["GO:0048271"],"synonyms":[{"name":"trichome cell differentiation","type":"exact"}],"termid":"GO:0010026"}


id: PR:Q9USR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnp3 gene.","definition_xrefs":["UniProtKB:Q9USR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.01c","synonyms":[{"name":"CENP-C homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp3","type":"exact"}],"termid":"PR:Q9USR9"}


id: GO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a compound eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell fate commitment","termid":"GO:0042706"},{"relation_name":"part_of","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye photoreceptor fate commitment","secondary_identifiers":["GO:0007459"],"termid":"GO:0001752"}


id: GO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,3',5'-triiodo-L-thyronine + iodide + A + H+ = L-thyroxine + AH2.","definition_xrefs":["EC:1.21.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"thyroxine 5-deiodinase activity","secondary_identifiers":["RHEA:18897","MetaCyc:1.97.1.11-RXN"],"synonyms":[{"name":"acceptor:3,3',5'-triiodo-L-thyronine oxidoreductase (iodinating) activity","type":"related"},{"name":"diiodothyronine 5'-deiodinase activity","type":"broad"},{"name":"inner ring-deiodinating pathway","type":"exact"},{"name":"iodothyronine 5-deiodinase activity","type":"related"},{"name":"iodothyronine inner ring monodeiodinase activity","type":"related"},{"name":"type III iodothyronine deiodinase activity","type":"narrow"}],"termid":"GO:0033798"}


id: SO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double-stranded DNA used to control macromolecular structure and function.","direct_ancestors":[{"relation_name":"is_a","term_name":"ds_oligo","termid":"SO:0000442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_constraint_sequence","synonyms":[{"name":"DNA constraint","type":"exact"},{"name":"DNA constraint sequence","type":"exact"}],"termid":"SO:0001009"}


id: PBO:0036238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human c22orf39 ortholog","termid":"PBO:0036238"}


id: PR:Q10270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoadenosine phosphosulfate reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.06","secondary_identifiers":["UniProtKB:Q10270"],"synonyms":[{"name":"3'-phosphoadenylylsulfate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAPS reductase, thioredoxin dependent (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAdoPS reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cysH","type":"exact"}],"termid":"PR:Q10270"}


id: GO:0102889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-elemene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"beta-elemene synthase activity","secondary_identifiers":["MetaCyc:RXN-8432"],"termid":"GO:0102889"}


id: PBO:0083764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential light chain for Myo1p; light chain for Myo2p; stabilizes Myo2p by binding to the neck region; interacts with Myo1p, Iqg1p, and Myo2p to coordinate formation and contraction of the actomyosin ring with targeted membrane deposition","termid":"PBO:0083764"}


id: GO:0034532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-7-hydroxymethylchromene-2-carboxylate = 2-hydroxy-4-hydroxymethylbenzalpyruvate.","definition_xrefs":["UM-BBD_reactionID:r0765"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-7-hydroxymethylchromene-2-carboxylate isomerase activity (obsolete GO:0034532)","termid":"GO:0034532"}


id: GO:1902666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained in, a location within a Mmi1 nuclear focus complex.","definition_xrefs":["PMID:23980030","GO_REF:0000087","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to Mmi1 nuclear focus complex (obsolete GO:1902666)","synonyms":[{"name":"protein localisation in Mmi1 nuclear focus complex","type":"exact"},{"name":"protein localisation to Mmi1 nuclear focus complex","type":"exact"},{"name":"protein localization in Mmi1 nuclear focus complex","type":"exact"}],"termid":"GO:1902666"}


id: GO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Oplophorus luciferin + O2 = oxidized Oplophorus luciferin + CO2 + hnu.","definition_xrefs":["EC:1.13.12.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"Oplophorus-luciferin 2-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-3361","RHEA:20417"],"synonyms":[{"name":"Oplophorus luciferase activity","type":"related"},{"name":"Oplophorus-luciferin:oxygen 2-oxidoreductase (decarboxylating) activity","type":"related"}],"termid":"GO:0033756"}


id: FYECO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an experiment was performed in diploid cells.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000203 diploid cells (obsolete FYECO:0000203)","synonyms":[{"name":"2N cells","type":"exact"}],"termid":"FYECO:0000203"}


id: PBO:0083608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps essential RRN5 gene which encodes a member of the UAF transcription factor involved in transcription of rDNA by RNA polymerase I","termid":"PBO:0083608"}


id: GO:0045984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pyrimidine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyrimidine nucleobase metabolic process","termid":"GO:0006142"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of pyrimidine nucleobase metabolic process","synonyms":[{"name":"down regulation of pyrimidine base metabolic process","type":"exact"},{"name":"down-regulation of pyrimidine base metabolic process","type":"exact"},{"name":"downregulation of pyrimidine base metabolic process","type":"exact"},{"name":"inhibition of pyrimidine base metabolic process","type":"narrow"},{"name":"negative regulation of pyrimidine base metabolic process","type":"exact"},{"name":"negative regulation of pyrimidine base metabolism","type":"exact"}],"termid":"GO:0045984"}


id: PBO:0091386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b translation regulator Cbp8","termid":"PBO:0091386"}


id: PBO:0091334
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Z Homolog","termid":"PBO:0091334"}


id: PBO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 6","termid":"PBO:0080171"}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: GO:1901058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-hydroxyphenyl lignin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin metabolic process","synonyms":[{"name":"H-lignin metabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin metabolism","type":"exact"}],"termid":"GO:1901058"}


id: PBO:0065184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich 2","termid":"PBO:0065184"}


id: PBO:0084963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs; MLP1 has a paralog, MLP2, that arose from the whole genome duplication","termid":"PBO:0084963"}


id: PBO:0001012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc transferase associated protein Alg14 (predicted)","termid":"PBO:0001012"}


id: PBO:0091691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crazy cell surface glycoprotein","termid":"PBO:0091691"}


id: FYPO:0001879
data:
  {"alleles_by_uniquename":{"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115430,115437,115431],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a smaller diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"thin cell","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_03581","SJAG_04280"],"single_locus_genotype_uniquenames":["gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased cell diameter","type":"exact"},{"name":"decreased cell thickness","type":"exact"},{"name":"decreased cell width","type":"exact"}],"termid":"FYPO:0001879","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PATO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000653 addictive substance value (obsolete PATO:0000653)","termid":"PATO:0000653"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85129],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[103967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: GO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process","synonyms":[{"name":"apoptosis regulator activity","type":"related"},{"name":"regulation of apoptosis","type":"narrow"}],"termid":"GO:0042981"}


id: GO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a D4 dopamine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine receptor binding","termid":"GO:0050780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"D4 dopamine receptor binding","synonyms":[{"name":"D4 dopamine receptor ligand","type":"narrow"}],"termid":"GO:0031751"}


id: PBO:0082012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 9","termid":"PBO:0082012"}


id: GO:0010573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of vascular endothelial growth factor production due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"vascular endothelial growth factor production","synonyms":[{"name":"VEGF production","type":"exact"}],"termid":"GO:0010573"}


id: PBO:0058362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4734","termid":"PBO:0058362"}


id: PBO:0071855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 50","termid":"PBO:0071855"}


id: PBO:0035896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035896"}


id: MOD:00768
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Oxidation of methionine to methionine sulfone with neutral loss of CH3SO2H.","definition_xrefs":["PubMed:18688235","PubMed:9004526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine oxidation with neutral loss of 80 Da","termid":"MOD:00768"}


id: GO:1905451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["PMID:18832707","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060369"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"positively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"activation of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"activation of IgG-mediated phagocytosis","type":"narrow"},{"name":"positive regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"positive regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"positive regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"positive regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"upregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"upregulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905451"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: GO:0033052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanoamino acids, amino acid derivatives that contain a cyanide group.","definition_xrefs":["GOC:mah","PMID:11575729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"cyanoamino acid metabolic process","synonyms":[{"name":"cyanoamino acid metabolism","type":"exact"}],"termid":"GO:0033052"}


id: GO:0030658
data:
  {"annotated_genes":["SJAG_04565","SJAG_02349","SJAG_05344","SJAG_00379","SJAG_04609","SJAG_00906","SJAG_01809","SJAG_03907","SJAG_01633","SJAG_00557","SJAG_04513","SJAG_01939","SJAG_00284","SJAG_03153","SJAG_03558","SJAG_00072","SJAG_04023","SJAG_02282","SJAG_05345","SJAG_02539","SJAG_04517"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97148,108784,114868,109003],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[90935,108907],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[89397,91555,104724,106203,107976,102555,74031,108715,112609,70492],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[105796,97100,91594,110196,104023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a transport vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"transport vesicle","termid":"GO:0030133"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"transport vesicle membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0030658","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030127":null,"GO:0030130":null}}


id: GO:0032345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of aldosterone metabolic process","termid":"GO:0032344"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"negative regulation of aldosterone metabolic process","synonyms":[{"name":"down regulation of aldosterone metabolic process","type":"exact"},{"name":"down-regulation of aldosterone metabolic process","type":"exact"},{"name":"downregulation of aldosterone metabolic process","type":"exact"},{"name":"inhibition of aldosterone metabolic process","type":"narrow"},{"name":"negative regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032345"}


id: FYPO:0004057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is increased. Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:19436749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased intragenic meiotic recombination","synonyms":[{"name":"increased meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0004057"}


id: PBO:0055440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2871","termid":"PBO:0055440"}


id: PBO:0089722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane lipid metabolism regulator Opa3","termid":"PBO:0089722"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: FYPO:0007518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage occurring as a side effect of transcription in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased transcription-induced DNA damage","synonyms":[{"name":"increased DNA damage by transcription","type":"exact"},{"name":"increased transcription-induced DNA damage during mitotic cell cycle","type":"related"},{"name":"increased transcription-induced DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0007518"}


id: GO:0042382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei.","definition_xrefs":["PMID:11790299","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"paraspeckles","secondary_identifiers":["Wikipedia:Paraspeckle"],"termid":"GO:0042382"}


id: PBO:0071924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 1","termid":"PBO:0071924"}


id: PBO:0088729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did2","termid":"PBO:0088729"}


id: GO:1904619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dimethyl sulfoxide stimulus.","definition_xrefs":["PMID:12873812","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dimethyl sulfoxide","synonyms":[{"name":"response to DMSO","type":"exact"}],"termid":"GO:1904619"}


id: PBO:0070150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 64 pseudogene","termid":"PBO:0070150"}


id: PR:O13915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpn1 gene.","definition_xrefs":["UniProtKB:O13915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.10","synonyms":[{"name":"Spom972h-mpn1","type":"exact"}],"termid":"PR:O13915"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: PBO:0029821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_swollen_cells,_abnormal_cell_shape_(obsolete_FYPO:0002416)","termid":"PBO:0029821"}


id: PR:O14199
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transferase subunit ALG14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12154:SF0","PRO:DNx","OMA:SCHPO00606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.06c","secondary_identifiers":["UniProtKB:O14199"],"synonyms":[{"name":"Spom972h-ALG14","type":"exact"},{"name":"asparagine-linked glycosylation protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14199"}


id: GO:0051087
data:
  {"annotated_genes":["SJAG_04014","SJAG_00574","SJAG_04817","SJAG_01545","SJAG_04518","SJAG_01121","SJAG_00403","SJAG_03955","SJAG_03135","SJAG_04336","SJAG_04228","SJAG_01914","SJAG_02077","SJAG_03794","SJAG_00564","SJAG_00436","SJAG_03094","SJAG_04187","SJAG_01737","SJAG_03784","SJAG_01684","SJAG_01160"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58163,58907,60636,66108,67327,69115,69420,70766,71959,73591,74983,75349,76462,77867,78000],"is_not":false,"summary":null,"term":"GO:0051087"},{"annotations":[66138,65643,78914,76736,70075,58419,78554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.","definition_xrefs":["PMID:10585443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00564":null,"SJAG_00574":null,"SJAG_01121":null,"SJAG_01160":null,"SJAG_01545":null,"SJAG_01684":null,"SJAG_01737":null,"SJAG_01914":null,"SJAG_02077":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03784":null,"SJAG_03794":null,"SJAG_03955":null,"SJAG_04014":null,"SJAG_04187":null,"SJAG_04228":null,"SJAG_04336":null,"SJAG_04518":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein-folding chaperone binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"chaperone binding","type":"broad"},{"name":"chaperone protein binding","type":"exact"},{"name":"co-chaperone activity","type":"related"},{"name":"co-chaperonin activity","type":"related"}],"termid":"GO:0051087","terms_by_termid":{"GO:0030544":null,"GO:0051087":null}}


id: PBO:0027023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_punctate_nuclear_protein_localization,_with_protein_distributed_in_nucleus","termid":"PBO:0027023"}


id: PBO:0026798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_regulatory_particle_binding","termid":"PBO:0026798"}


id: GO:0033684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"}


id: PBO:0065003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM8 antisense RNA 1","termid":"PBO:0065003"}


id: PBO:0108543
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0108543"}


id: GO:1903365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fear response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:8677262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fear response","synonyms":[{"name":"regulation of physiological fear response","type":"exact"}],"termid":"GO:1903365"}


id: GO:1990472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dual-strand piRNA clusters, double-stranded DNA regions that give rise to PIWI-interacting RNAs (piRNAs) where piRNAs originate from both DNA strands via noncanonical transcription.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA cluster binding","termid":"GO:1990470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"piRNA dual-strand cluster binding","termid":"GO:1990472"}


id: PBO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation","termid":"PBO:0030975"}


id: GO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesonephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell proliferation involved in mesonephros development","termid":"GO:0061222"}


id: GO:0015629
data:
  {"annotated_genes":["SJAG_03357","SJAG_02177","SJAG_04982","SJAG_04901","SJAG_05185","SJAG_02320","SJAG_02486","SJAG_02266","SJAG_04724","SJAG_01993","SJAG_00152","SJAG_03564","SJAG_01114","SJAG_01017","SJAG_03681","SJAG_02838","SJAG_01268","SJAG_02169","SJAG_03581","SJAG_02511","SJAG_03374","SJAG_00663","SJAG_03025","SJAG_00268","SJAG_01277","SJAG_04517","SJAG_04509","SJAG_00279","SJAG_01143","SJAG_04498","SJAG_01665","SJAG_00700","SJAG_02075","SJAG_00082","SJAG_00667","SJAG_03465","SJAG_03088","SJAG_02431","SJAG_03455","SJAG_02864","SJAG_04375","SJAG_02718","SJAG_02831","SJAG_00228","SJAG_03379","SJAG_03453","SJAG_04621","SJAG_04465","SJAG_02202","SJAG_00185","SJAG_03704","SJAG_00750","SJAG_04001","SJAG_03044","SJAG_04624","SJAG_02278","SJAG_00807","SJAG_04479","SJAG_01748","SJAG_03011","SJAG_02228","SJAG_01384","SJAG_03380","SJAG_01171","SJAG_03444","SJAG_02392","SJAG_03887","SJAG_00920","SJAG_01943","SJAG_05285","SJAG_02700","SJAG_03631","SJAG_04100","SJAG_04703","SJAG_01894","SJAG_02282","SJAG_03145","SJAG_03146","SJAG_00649","SJAG_02566","SJAG_01964","SJAG_01787","SJAG_00397","SJAG_03596","SJAG_03646","SJAG_03086","SJAG_04781","SJAG_03375","SJAG_02245","SJAG_00229","SJAG_00938","SJAG_05001","SJAG_02737","SJAG_03673","SJAG_04886","SJAG_03703","SJAG_00140","SJAG_04644","SJAG_01889","SJAG_00677","SJAG_03625","SJAG_04052","SJAG_03119","SJAG_04461","SJAG_00907","SJAG_00521","SJAG_04887","SJAG_00845","SJAG_04597","SJAG_01732","SJAG_01888","SJAG_04077","SJAG_00970","SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97764,94910,101130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099079"},{"annotations":[85430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[101344,103155,104735,110881,103029,95878,107867,114841,105051,86724,85886,95335,97765,101131,88615,96972,96941,99073,108190,112176,106688,89689,107669,84220,89863,110320,114483,108906,97735,99256,108164,86925,102881,103995,95698,91322,93754,84325,90836,88574,99318,93952,98749,102014,101149,102842,107021,98526,94850,94911,90934],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[105052,97766,101132,91323,110321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005884"},{"annotations":[101133,85388,115474],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032432"},{"annotations":[115178,115141,115177,115179,115180,115181,115473,98437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[84221,86725,95699,95879,99319,101150,94851],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005885"},{"annotations":[91247,98978,109958,107051,79204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005869"},{"annotations":[94914,84328],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008290"},{"annotations":[94320,91326,104127,115315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070648"},{"annotations":[97961,86894,107316,89866,96166,88550,90066,104067,91408,115317,97962,84352,110624,104128,112183,91327,95569,85160],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[85390,90453,86822,97289,104131,102884,106800,115350,88578,90981,86046,92360,94321,90627,97282,108304,115316,109362,113042,88364,96954,111899,89867,115341,115343,94065,113869,86775,114820,101348,113636,91329,111814,96720,103037,114628,93240,84346,102196,88623,93681,98441,106759,99710,85878,115348,83963,113887,115346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[96551,105057,113870,96721,101136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[108305,96955,106801,92361,105058,90982,99711,86047,113871,91885,84347,93241,102197,109363,113888,86823,90454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[93933,94066,88365,104132,112951,96134,113043,88624,105059,96982,99932,113872,103038,93682,98442],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"},{"annotations":[112186,104133],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016459"},{"annotations":[91411,92907,99264],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045160"},{"annotations":[78650,113874,97283,96722,93684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016460"},{"annotations":[65281],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.","definition_xrefs":["ISBN:0815316194","GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":114,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00397":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01017":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01171":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01384":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01739":null,"SJAG_01748":null,"SJAG_01787":null,"SJAG_01888":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02169":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02282":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02486":null,"SJAG_02511":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03357":null,"SJAG_03374":null,"SJAG_03375":null,"SJAG_03379":null,"SJAG_03380":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03646":null,"SJAG_03673":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04644":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04781":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05185":null,"SJAG_05285":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"actin cytoskeleton","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"termid":"GO:0015629","terms_by_termid":{"GO:0001725":null,"GO:0005826":null,"GO:0005869":null,"GO:0005884":null,"GO:0005885":null,"GO:0008290":null,"GO:0016459":null,"GO:0016460":null,"GO:0030478":null,"GO:0030479":null,"GO:0032432":null,"GO:0045160":null,"GO:0070648":null,"GO:0099079":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:1990819":null}}


id: PBO:0082533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-4 has a paralog, ASP3-2, that arose from a segmental duplication","termid":"PBO:0082533"}


id: PBO:0085336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoenolpyruvate carboxykinase; key enzyme in gluconeogenesis, catalyzes early reaction in carbohydrate biosynthesis, glucose represses transcription and accelerates mRNA degradation, regulated by Mcm1p and Cat8p, located in the cytosol","termid":"PBO:0085336"}


id: GO:0006349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic mechanism of regulation of gene expression in which epigenetic modifications (imprints) are established during gametogenesis. For a given gene to show parentally biased expression, the imprint are established exclusively in one of the two parental genomes, thus generating an asymmetry between the maternal and paternal alleles.","definition_xrefs":["PMID:31896690","PMID:7502071","PMID:11498578"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression by genomic imprinting (obsolete GO:0006349)","synonyms":[{"name":"regulation of gene expression by DNA imprinting","type":"exact"},{"name":"regulation of gene expression by genetic imprinting","type":"related"}],"termid":"GO:0006349"}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: PBO:0066201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 2","termid":"PBO:0066201"}


id: PBO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 24","termid":"PBO:0071559"}


id: PR:Q8TFH4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8TFH4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA methyltransferase PB17E12.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.10c","synonyms":[{"name":"Spom972h-SPAPB17E12.10c","type":"exact"},{"name":"rRNA (uridine-2'-O-)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH4"}


id: GO:0031151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 79) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 79). This reaction is the addition of a methyl group to the lysine residue at position 79 of the histone H3 protein.","definition_xrefs":["PMID:15371351","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0008276","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K79 methyltransferase activity","synonyms":[{"name":"histone H3K79 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone methylase activity (H3-K79 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K79 specific)","type":"exact"},{"name":"histone-H3K79 methyltransferase activity","type":"exact"}],"termid":"GO:0031151"}


id: GO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of signal promoting pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (pseudohyphal growth) (obsolete GO:0000190)","synonyms":[{"name":"MAPKKK cascade (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000190"}


id: GO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dimer consisting of an alpha and a beta-subunit that imports proteins with an NLS into the nucleus through a nuclear pore.","definition_xrefs":["PMID:9323134","GOC:jl","PMID:9323123","Wikipedia:Importin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport complex","termid":"GO:0031074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NLS-dependent protein nuclear import complex","termid":"GO:0042564"}


id: PBO:0091960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase, type B family protein","termid":"PBO:0091960"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: PBO:0075179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 9","termid":"PBO:0075179"}


id: GO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","PMID:19223472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of Wnt protein secretion","termid":"GO:0061356"}


id: PBO:0034397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_upstream_target_(obsolete_has_upstream_target)","termid":"PBO:0034397"}


id: GO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphodiester bond hydrolysis involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage involved in rRNA processing (obsolete GO:0000469)","synonyms":[{"name":"cleavage during rRNA processing","type":"related"}],"termid":"GO:0000469"}


id: PR:Q10279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fur4 gene.","definition_xrefs":["UniProtKB:Q10279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.03","synonyms":[{"name":"Spom972h-fur4","type":"exact"}],"termid":"PR:Q10279"}


id: PBO:0057171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 323b","termid":"PBO:0057171"}


id: PBO:0066105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1C","termid":"PBO:0066105"}


id: GO:0007580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance, as cells age, of circular DNA molecules that originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:9891807"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in cell aging (obsolete GO:0007580)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during cell aging","type":"related"}],"termid":"GO:0007580"}


id: GO:1904183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["PMID:25525879","GO_REF:0000059","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of pyruvate dehydrogenase activity","termid":"GO:1904182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyruvate dehydrogenase activity","synonyms":[{"name":"down regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"down-regulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvate dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"downregulation of pyruvic dehydrogenase activity","type":"exact"},{"name":"inhibition of pyruvate dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic acid dehydrogenase activity","type":"narrow"},{"name":"inhibition of pyruvic dehydrogenase activity","type":"narrow"},{"name":"negative regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"negative regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904183"}


id: PBO:0066574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh blood group D antigen","termid":"PBO:0066574"}


id: PBO:0054721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2130","termid":"PBO:0054721"}


id: GO:2000049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000049"}


id: FYPO:0003994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal succinate dehydrogenase activity","termid":"FYPO:0003994"}


id: GO:0034915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methyl-3-oxooctanoyl-CoA + CoA = acetyl-CoA + 2-methylhexanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0927"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylhexanoyl-CoA C-acetyltransferase activity (obsolete GO:0034915)","termid":"GO:0034915"}


id: PBO:0029438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029438"}


id: PR:000050564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PRO:DAN","PMID:34382996","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 42 (Schizosaccharomyces pombe)","termid":"PR:000044798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc42/GDP+","pombase_gene_id":"SPAC110.03","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 42, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc42/GDP+","type":"exact"},{"name":"cdc42/GDP+","type":"exact"}],"termid":"PR:000050564"}


id: PBO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5 (predicted)","termid":"PBO:0004196"}


id: GO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"proline-rich region binding","termid":"GO:0070064"}


id: GO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADPH + H+ + O2 = 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1150"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-HSA hydroxylase activity (obsolete GO:0034819)","termid":"GO:0034819"}


id: PBO:0057205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 375","termid":"PBO:0057205"}


id: GO:0010819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell chemotaxis","termid":"GO:0010819"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"modulation by symbiont of host anion transport","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: FYPO:0007325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a transfer RNA (tRNA) is increased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-RNA interaction","termid":"FYPO:0002135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002131","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased tRNA binding","synonyms":[{"name":"increased protein-tRNA interaction","type":"exact"},{"name":"increased protein-transfer RNA interaction","type":"exact"},{"name":"increased transfer RNA binding","type":"exact"}],"termid":"FYPO:0007325"}


id: FYPO:0002949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of substance in cell during G0","synonyms":[{"name":"increased accumulation of substance in cell during G0","type":"related"},{"name":"increased level of substance in cell during cell quiescence","type":"exact"},{"name":"increased level of substance in cell during quiescence","type":"exact"},{"name":"increased substance level during G0","type":"exact"}],"termid":"FYPO:0002949"}


id: PATO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality in which events occur in sequence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"time","termid":"PATO:0000165"}


id: PBO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 109","termid":"PBO:0071107"}


id: PBO:0039716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 2","termid":"PBO:0039716"}


id: GO:0036527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from an arginine residue of a glycated protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25416785","PMID:14568004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine deglycation","synonyms":[{"name":"deglycation of N-acetylarginine","type":"related"}],"termid":"GO:0036527"}


id: PBO:0089833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Mak5","termid":"PBO:0089833"}


id: PBO:0088505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-3) methyltransferase Trm140","termid":"PBO:0088505"}


id: GO:0047657
data:
  {"annotated_genes":["SJAG_01028","SJAG_02916","SJAG_04184","SJAG_03057","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85214,100185,105074,110389,113789],"is_not":false,"summary":null,"term":"GO:0047657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [alpha-D-glucosyl-(1,3)]n = UDP + [alpha-D-glucosyl-(1,3)]n+1.","definition_xrefs":["MetaCyc:ALPHA-13-GLUCAN-SYNTHASE-RXN","EC:2.4.1.183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01028":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alpha-1,3-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:19749"],"synonyms":[{"name":"1,3-alpha-D-glucan synthase activity","type":"related"},{"name":"1,3-alpha-glucan synthase activity","type":"exact"},{"name":"UDP-glucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:alpha-D-(1->3)-glucan 3-alpha-D-glucosyltransferase activity","type":"related"},{"name":"a-1,3-glucan synthase activity","type":"exact"},{"name":"uridine diphosphoglucose-1,3-alpha-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0047657","terms_by_termid":{"GO:0047657":null}}


id: GO:0008908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + isochorismate = 2,3-dihydroxy-2,3-dihydrobenzoate + pyruvate.","definition_xrefs":["EC:3.3.2.1","RHEA:11112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene-A4 hydrolase activity","termid":"GO:0004463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"isochorismatase activity","secondary_identifiers":["MetaCyc:ISOCHORMAT-RXN","KEGG_REACTION:R03037"],"synonyms":[{"name":"2,3 dihydro-2,3 dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoic synthase activity","type":"related"},{"name":"isochorismate pyruvate-hydrolase activity","type":"related"}],"termid":"GO:0008908"}


id: PBO:0027196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules_following_spindle_microtubule_fragmentation","termid":"PBO:0027196"}


id: PBO:0079825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 4","termid":"PBO:0079825"}


id: PBO:0046472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBIN divergent transcript","termid":"PBO:0046472"}


id: PBO:0071515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 18","termid":"PBO:0071515"}


id: PBO:0076660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 22","termid":"PBO:0076660"}


id: PBO:0057885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3189","termid":"PBO:0057885"}


id: PBO:0056324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 7","termid":"PBO:0056324"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_01521","SJAG_01252","SJAG_04084","SJAG_04321","SJAG_04056","SJAG_00507","SJAG_03179","SJAG_03805","SJAG_04824","SJAG_01818","SJAG_00226","SJAG_03223","SJAG_00854","SJAG_04360","SJAG_04153","SJAG_05014","SJAG_03886","SJAG_01218","SJAG_05276","SJAG_01830","SJAG_03276","SJAG_04818","SJAG_04006","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85866,85970,86371,87567,95796,100757,101886,109588,111375],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[84826,89115,112158,104823,97259,111889,100409,93290,85865,91959,87566,102459,101257,103458,113234,98101,114292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03276":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nonsense-mediated_decay","Wikipedia:Nonsense-mediated_mRNA_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: GO:0021792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone is directed to a specific target site in response to an attractive chemical signal. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:14699587","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor axon","synonyms":[{"name":"positive chemotaxis of branchiomotor axon","type":"exact"}],"termid":"GO:0021792"}


id: PBO:0053406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 339","termid":"PBO:0053406"}


id: PBO:0087837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiosulfate sulfurtransferase; contains a rhodanese-like domain; localized to the mitochondrial outer membrane; protein abundance increases in response to DNA replication stress; similar to the human TSTD gene","termid":"PBO:0087837"}


id: PBO:0060626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5","termid":"PBO:0060626"}


id: GO:0042056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0140677","GO:0098772","GO:0005515"],"is_obsolete":false,"name":"chemoattractant activity","synonyms":[{"name":"attractant","type":"broad"}],"termid":"GO:0042056"}


id: PBO:0077597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 9","termid":"PBO:0077597"}


id: CHEBI:27641
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cycloheximide","termid":"CHEBI:27641"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: PBO:0067022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 35, pseudogene","termid":"PBO:0067022"}


id: PBO:0070380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 1 pseudogene 1","termid":"PBO:0070380"}


id: PBO:0075839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 homolog, RNA polymerase II CTD phosphatase","termid":"PBO:0075839"}


id: FYPO:0000514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import does not occur. Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear import","synonyms":[{"name":"abolished nuclear import during mitotic cell cycle","type":"related"},{"name":"absent nuclear import","type":"exact"},{"name":"nuclear import abolished","type":"exact"},{"name":"nuclear import abolished during vegetative growth","type":"exact"},{"name":"nuclear import: absent","type":"related"}],"termid":"FYPO:0000514"}


id: GO:0036468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + H+ = CO2 + dopamine.","definition_xrefs":["RHEA:12272","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-dopa decarboxylase activity","synonyms":[{"name":"4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"DDC activity","type":"exact"},{"name":"DOPA decarboxylase activity","type":"related"}],"termid":"GO:0036468"}


id: PBO:0065647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type A","termid":"PBO:0065647"}


id: GO:0106002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to, and promotes stabilization of, mRNA molecules containing the major coding region instability determinant (mCRD) by bridging the mCRD domain and the poly(A) tail of the mRNA. In human, it consists of CSDE1, HNRPD, PABPC1, PAIP1 and SYNCRIP.","definition_xrefs":["GOC:bhm","PMID:11051545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mCRD-mediated mRNA stability complex","synonyms":[{"name":"mCRD-poly(A)-bridging complex","type":"exact"},{"name":"major coding region determinant of instability-mediated mRNA stability complex","type":"exact"},{"name":"major coding region instability determinant-mediated mRNA stability complex","type":"exact"},{"name":"major coding region instability determinant-poly(A)-bridging complex","type":"exact"},{"name":"major coding-region determinant of instability - poly(A) tail-bridging complex","type":"exact"}],"termid":"GO:0106002"}


id: GO:0016612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:11566366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"molybdenum-iron nitrogenase complex","secondary_identifiers":["MetaCyc:CPLX-525","MetaCyc:CPLX-186"],"synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"related"}],"termid":"GO:0016612"}


id: PBO:0080966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 7C","termid":"PBO:0080966"}


id: FYPO:0004470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring during mitosis","termid":"FYPO:0005467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring during mitotic anaphase","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during anaphase of mitosis","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring during mitotic anaphase","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring during mitotic anaphase","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring during mitotic anaphase","type":"exact"}],"termid":"FYPO:0004470"}


id: GO:0051914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chemical substance increases synaptic plasticity, the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity","termid":"GO:0031915"},{"relation_name":"is_a","term_name":"regulation of synaptic plasticity by chemical substance","termid":"GO:0051913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of synaptic plasticity by chemical substance","synonyms":[{"name":"activation of synaptic plasticity by chemical substance","type":"narrow"},{"name":"positive regulation of synaptic plasticity by drug","type":"narrow"},{"name":"stimulation of synaptic plasticity by chemical substance","type":"narrow"},{"name":"up regulation of synaptic plasticity by chemical substance","type":"exact"},{"name":"up-regulation of synaptic plasticity by chemical substance","type":"exact"},{"name":"upregulation of synaptic plasticity by chemical substance","type":"exact"}],"termid":"GO:0051914"}


id: PBO:0054668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2074","termid":"PBO:0054668"}


id: PBO:0055252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2679","termid":"PBO:0055252"}


id: PBO:0041230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 52","termid":"PBO:0041230"}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: GO:0061804
data:
  {"annotated_genes":["SJAG_00794","SJAG_04745","SJAG_02332","SJAG_02761","SJAG_01297","SJAG_04841","SJAG_02246","SJAG_01224","SJAG_03073","SJAG_02336","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90817,93329,94655,95876,96411,97457,99914,104262],"is_not":false,"summary":null,"term":"GO:0061804"},{"annotations":[74529,90813,91353],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[107439],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase.","definition_xrefs":["GOC:dph","GOC:vw","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"part_of","term_name":"mitotic spindle elongation","termid":"GO:0000022"},{"relation_name":"part_of","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0000070","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle formation (spindle phase one)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle elongation during mitotic prophase","type":"exact"},{"name":"mitotic spindle elongation during prophase","type":"exact"},{"name":"mitotic spindle elongation during prophase and prometaphase","type":"exact"}],"termid":"GO:0061804","terms_by_termid":{"GO:0000073":null,"GO:0061804":null,"GO:0110161":null}}


id: PBO:0076470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 6 homolog","termid":"PBO:0076470"}


id: GO:0005899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A disulfide-bonded, heterotetrameric receptor complex. The alpha chains are entirely extracellular, while each beta chain has one transmembrane domain. The ligand binds to the alpha subunit extracellular domain and the kinase is associated with the beta subunit intracellular domain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"insulin receptor complex","termid":"GO:0005899"}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016301","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9821982","Reactome:R-HSA-9821967","Reactome:R-HSA-9729330"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: GO:0005873
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99905,104251],"is_not":false,"summary":null,"term":"GO:0005873"}]},"cv_name":"cellular_component","definition":"Any complex that includes a dimer of molecules from the kinesin superfamily and any associated proteins, and moves towards the plus end of a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin complex","termid":"GO:0005871"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"plus-end kinesin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005873","terms_by_termid":{"GO:0005873":null}}


id: PATO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000802 sensory function value (obsolete PATO:0000802)","termid":"PATO:0000802"}


id: PBO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ2 antisense RNA 1","termid":"PBO:0052206"}


id: PBO:0078458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 10 (non-functional)","termid":"PBO:0078458"}


id: GO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-arginine to form omega-N-phospho-L-arginine.","definition_xrefs":["RESID:AA0222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine phosphorylation","termid":"GO:0018109"}


id: PBO:0085052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; has structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to the nucleus and cytoplasm","termid":"PBO:0085052"}


id: PBO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25 (predicted)","termid":"PBO:0004756"}


id: PBO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 4","termid":"PBO:0043196"}


id: PBO:0074962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-4","termid":"PBO:0074962"}


id: FYPO:0003569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of a spindle pole body (SPB) into the nuclear envelope is abnormal, and the SPB enters the cytoplasm. An open fenestra remains present in the nuclear envelope.","definition_xrefs":["PMID:24963130","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body insertion into nuclear envelope","termid":"FYPO:0003567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm","synonyms":[{"name":"SPB unanchored to nuclear envelope","type":"related"},{"name":"abnormal establishment of mitotic spindle pole body localization to nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope, with spindle pole body in cytoplasm","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope, with spindle pole body in cytoplasm, during vegetative growth","type":"exact"},{"name":"spindle pole body in cytoplasm, unanchored to nuclear envelope","type":"related"},{"name":"spindle pole body unanchored to nuclear envelope","type":"related"},{"name":"unanchored spindle pole bodies","type":"related"}],"termid":"FYPO:0003569"}


id: PBO:0058628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6760","termid":"PBO:0058628"}


id: PBO:0091210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit ribosomal RNA","termid":"PBO:0091210"}


id: GO:0140522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of joining two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:32641474","PMID:11493675","PMID:12600315","PMID:10332732","PMID:32100701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"fusogenic activity","termid":"GO:0140522"}


id: PBO:0059862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoregulin","termid":"PBO:0059862"}


id: _global:causally_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within,_positive_effect","termid":"_global:causally_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_positive_effect","secondary_identifiers":["RO:0002304"],"termid":"_global:causally_upstream_of,_positive_effect"}


id: GO:0001840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neural plate over time, from its formation to the mature structure. The neural plate is a flat, thickened layer of ectodermal cells. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["GOC:ef","ISBN:0878932585","GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate development","termid":"GO:0001840"}


id: GO:0034859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole + 1/2 O2 = 2-hydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole monooxygenase activity (obsolete GO:0034859)","termid":"GO:0034859"}


id: PBO:0047135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 172 member A","termid":"PBO:0047135"}


id: FYPO:0007530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 does not occur at heterochromatin islands near genes that are normally expressed during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:22144463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at heterochromatin island at meiotic gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007530"}


id: PBO:0039544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD40 C-terminal like","termid":"PBO:0039544"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113518],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0077946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 6-1","termid":"PBO:0077946"}


id: PBO:0061375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 35","termid":"PBO:0061375"}


id: PBO:0027947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_mitosis","termid":"PBO:0027947"}


id: FYPO:0008154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric heterochromatin is normal (i.e. indistinguishable from wild type.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}


id: GO:0102220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 dihydrogen + NAD + 2 an oxidized ferredoxin = NADH + 3 H+ + 2 a reduced ferredoxin.","definition_xrefs":["GOC:pz","RHEA:30279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydrogenase activity (NAD+, ferredoxin)","secondary_identifiers":["MetaCyc:RXN-12215","EC:1.12.1.4"],"termid":"GO:0102220"}


id: PBO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_import","termid":"PBO:0031695"}


id: PBO:0028525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9K14_acetylation","termid":"PBO:0028525"}


id: PBO:0076967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like X-linked","termid":"PBO:0076967"}


id: PBO:0069848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1134, pseudogene","termid":"PBO:0069848"}


id: PBO:0036087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0036087"}


id: RO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q inheres in part of w if and only if there exists some p such that q inheres in p and p part of w.","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in_part_of","termid":"RO:0002314"}


id: PBO:0062526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 1","termid":"PBO:0062526"}


id: FYPO:0001237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cadmium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cadmium","synonyms":[{"name":"normal cell population growth in presence of cadmium","type":"exact"},{"name":"normal cell population growth on cadmium","type":"exact"},{"name":"normal cell population growth on cadmium ion","type":"exact"},{"name":"normal cellular response to cadmium","type":"related"},{"name":"normal growth on cadmium ions","type":"exact"},{"name":"normal vegetative cell population growth on cadmium","type":"exact"}],"termid":"FYPO:0001237"}


id: PBO:0075336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 1","termid":"PBO:0075336"}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: GO:1902005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline biosynthetic process.","definition_xrefs":["PMID:23415322","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of proline biosynthetic process","synonyms":[{"name":"regulation of proline anabolism","type":"exact"},{"name":"regulation of proline biosynthesis","type":"exact"},{"name":"regulation of proline formation","type":"exact"},{"name":"regulation of proline synthesis","type":"exact"}],"termid":"GO:1902005"}


id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: PBO:0018171
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0018171"}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: PBO:0054838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2252","termid":"PBO:0054838"}


id: PBO:0063346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin","termid":"PBO:0063346"}


id: PBO:0012549
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens Rab6","termid":"PBO:0012549"}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: PBO:0038494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 5","termid":"PBO:0038494"}


id: GO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrograde extension","termid":"GO:0003389"}


id: GO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-1,2-oxide + H2O = trans-1,2-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-1,2-epoxide hydrolase activity (obsolete GO:0018747)","termid":"GO:0018747"}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: GO:0005853
data:
  {"annotated_genes":["SJAG_02180","SJAG_04157","SJAG_02493","SJAG_01851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89636,89637,89638,108400,108401,108402,110728,114464,114465,114466],"is_not":false,"summary":null,"term":"GO:0005853"}]},"cv_name":"cellular_component","definition":"A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma.","definition_xrefs":["GOC:jl","PMID:10216950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01851":null,"SJAG_02180":null,"SJAG_02493":null,"SJAG_04157":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005853","terms_by_termid":{"GO:0005853":null}}


id: PBO:0077374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 115","termid":"PBO:0077374"}


id: GO:0021767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary body over time from its initial formation until its mature state. The mammillary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei.","definition_xrefs":["ISBN:0878937420","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary body development","termid":"GO:0021767"}


id: PBO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member A","termid":"PBO:0048875"}


id: SO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A point in nucleic acid where a cleavage event occurs.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_cleavage_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:nucleotide_cleavage_site","type":"exact"},{"name":"nucleotide cleavage site","type":"exact"}],"termid":"SO:0002204"}


id: PBO:0072354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 40","termid":"PBO:0072354"}


id: PBO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1","termid":"PBO:0090208"}


id: GO:0009970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfate starvation","synonyms":[{"name":"cellular response to sulphate starvation","type":"exact"}],"termid":"GO:0009970"}


id: GO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + indolin-2-one + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indole-2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07403","EC:1.14.14.153"],"termid":"GO:0036190"}


id: PBO:0092019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan (cca), mitochondrial","termid":"PBO:0092019"}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: PBO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 31, pseudogene","termid":"PBO:0044452"}


id: PBO:0082213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 2 subunit of the 20S proteasome","termid":"PBO:0082213"}


id: PBO:0076026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK24 antisense RNA 1","termid":"PBO:0076026"}


id: PBO:0003663
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TArgeting complex Subunit","termid":"PBO:0003663"}


id: PR:A6X980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfc7 gene.","definition_xrefs":["UniProtKB:A6X980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor tau subunit sfc7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.07","synonyms":[{"name":"Spom972h-sfc7","type":"exact"},{"name":"TFIIIC subunit sfc7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor C subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:A6X980"}


id: GO:0099180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of Zn2+ ions from the cytoplasm into the lumen of a cytoplasmic vesicle.","definition_xrefs":["PMID:9990090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into synaptic vesicle","synonyms":[{"name":"Zn2+ import into synaptic vesicle","type":"exact"},{"name":"zinc import into synaptic vesicle","type":"exact"}],"termid":"GO:0099180"}


id: GO:2000276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"negative regulation of cation transmembrane transport","termid":"GO:1904063"},{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation uncoupler activity","termid":"GO:2000275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"negative regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"negative regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000276"}


id: GO:0050514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + putrescine = sym-homospermidine + propane-1,3-diamine.","definition_xrefs":["EC:2.5.1.45","MetaCyc:2.5.1.45-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"homospermidine synthase (spermidine-specific) activity","secondary_identifiers":["RHEA:11236"],"synonyms":[{"name":"spermidine:putrescine 4-aminobutyltransferase (propane-1,3-diamine-forming)","type":"related"}],"termid":"GO:0050514"}


id: PBO:0089778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific serine/threonine protein kinase (NDR family) Mug27/Slk1","termid":"PBO:0089778"}


id: GO:0000969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous ATP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in vertebrate species.","definition_xrefs":["PMID:17786051","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA exon ligation utilizing ATP as source of linkage phosphate (obsolete GO:0000969)","termid":"GO:0000969"}


id: PBO:0006822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase Bst1 (predicted)","termid":"PBO:0006822"}


id: PBO:0071840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 35","termid":"PBO:0071840"}


id: GO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transporter of heavy metal ions that utilizes a carrier-mediated process to catalyze uniport, symport or antiport between aqueous phases on either side of a lipid membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion porter activity (obsolete GO:0005373)","synonyms":[{"name":"heavy metal ion porter activity","type":"exact"},{"name":"metal ion transporter","type":"broad"}],"termid":"GO:0005373"}


id: GO:0061428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hypoxia stimulus.","definition_xrefs":["GOC:dph","PMID:17785431"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hypoxia (obsolete GO:0061428)","termid":"GO:0061428"}


id: PBO:0087849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-aconitate methyltransferase; cytosolic enzyme that catalyzes the methyl esterification of 3-isopropylmalate, an intermediate of the leucine biosynthetic pathway, and trans-aconitate, which inhibits the citric acid cycle","termid":"PBO:0087849"}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: PBO:0066480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"refilin A","termid":"PBO:0066480"}


id: GO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + ergosterol = UDP + O-glucosyl-ergosterol.","definition_xrefs":["RHEA:61836","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ergosterol UDP-glucosyltransferase activity (obsolete GO:0051506)","termid":"GO:0051506"}


id: PBO:0046108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 1B","termid":"PBO:0046108"}


id: PBO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga6 (predicted)","termid":"PBO:0003250"}


id: PBO:0088744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane OPT oligopeptide transmembrane transporter family Isp4","termid":"PBO:0088744"}


id: PBO:0064650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA1 pseudogene 1","termid":"PBO:0064650"}


id: GO:1990507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone, and independent of ATP hydrolysis.","definition_xrefs":["GOC:rb","PMID:25242142"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-independent chaperone mediated protein folding (obsolete GO:1990507)","termid":"GO:1990507"}


id: GO:1902805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle transport.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:23527112","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle transport","termid":"GO:1902803"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle transport","termid":"GO:0048489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle transport","synonyms":[{"name":"activation of synaptic vesicle fission","type":"related"},{"name":"activation of synaptic vesicle fusion","type":"related"},{"name":"activation of synaptic vesicle transport","type":"narrow"},{"name":"positive regulation of synaptic vesicle fission","type":"related"},{"name":"positive regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle fission","type":"related"},{"name":"up regulation of synaptic vesicle fusion","type":"related"},{"name":"up regulation of synaptic vesicle transport","type":"exact"},{"name":"up-regulation of synaptic vesicle fission","type":"related"},{"name":"up-regulation of synaptic vesicle fusion","type":"related"},{"name":"up-regulation of synaptic vesicle transport","type":"exact"},{"name":"upregulation of synaptic vesicle fission","type":"related"},{"name":"upregulation of synaptic vesicle fusion","type":"related"},{"name":"upregulation of synaptic vesicle transport","type":"exact"}],"termid":"GO:1902805"}


id: GO:1901053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sarcosine.","definition_xrefs":["GOC:TermGenie","PMID:17951379","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"sarcosine metabolic process","termid":"GO:1901052"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sarcosine catabolic process","synonyms":[{"name":"sarcosine breakdown","type":"exact"},{"name":"sarcosine catabolism","type":"exact"},{"name":"sarcosine degradation","type":"exact"}],"termid":"GO:1901053"}


id: PBO:0087781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087781"}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: GO:0005725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the regions of heterochromatin that form a reproducible set of dense bands scattered along the euchromatic arms in polytene chromosomes.","definition_xrefs":["PMID:14579245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"intercalary heterochromatin","termid":"GO:0005725"}


id: PBO:0113181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; role in chromatin organization at replication origins, along with chromatin remodellers; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0113181"}


id: PBO:0003695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi five-dependent recombination repair protein Sfr1","termid":"PBO:0003695"}


id: GO:0047981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + acetyl-CoA = N(alpha)-acetyl-L-histidine + CoA + H+.","definition_xrefs":["RHEA:24596","EC:2.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"histidine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01160","MetaCyc:HISTIDINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:L-histidine N-acetyltransferase activity","type":"related"},{"name":"acetylhistidine synthetase activity","type":"related"},{"name":"histidine acetyltransferase activity","type":"related"}],"termid":"GO:0047981"}


id: PBO:0087326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor1p sorbitol dehydrogenase","termid":"PBO:0087326"}


id: PBO:0084353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase; reduces intracellular ROS and contributes to L-proline analog resistance and tolerance to ethanol and freezing; member of N-acetyltransferase superfamily; not found in S288C, only present in strains with Sigma1278b background; located on left arm of chromosome XIV approximately 15 kb from telomere","termid":"PBO:0084353"}


id: PR:Q09883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.12","synonyms":[{"name":"Spom972h-spn6","type":"exact"}],"termid":"PR:Q09883"}


id: GO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in females of species in which the female is the heterogametic sex; generally, the sex chromosome that pairs with the Z chromosome in the heterogametic sex. The W chromosome is absent from the cells of males and present in one copy in the somatic cells of females.","definition_xrefs":["GOC:mr","GOC:mah","PMID:20622855","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"W chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000804"}


id: PBO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1B2, pseudogene","termid":"PBO:0043025"}


id: PBO:0027594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027594"}


id: SO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed_pseudogene overlapped by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_processed_pseudogene","synonyms":[{"name":"transcribed processed pseudogene","type":"exact"}],"termid":"SO:0002109"}


id: PBO:0044356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 43","termid":"PBO:0044356"}


id: PBO:0051670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 1","termid":"PBO:0051670"}


id: GO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the centrosome cycle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centrosome cycle","termid":"GO:0046605"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"negatively_regulates","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of centrosome cycle","synonyms":[{"name":"down regulation of centrosome cycle","type":"exact"},{"name":"down-regulation of centrosome cycle","type":"exact"},{"name":"downregulation of centrosome cycle","type":"exact"},{"name":"inhibition of centrosome cycle","type":"narrow"}],"termid":"GO:0046606"}


id: FYPO:0001858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal fatty acid synthase activity","termid":"FYPO:0000720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased fatty acid synthase activity","synonyms":[{"name":"increased FAS activity","type":"exact"}],"termid":"FYPO:0001858"}


id: PBO:0081516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 425","termid":"PBO:0081516"}


id: GO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:cab2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic metabolic process","synonyms":[{"name":"antibiotic metabolism","type":"exact"}],"termid":"GO:0016999"}


id: PBO:0052635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 3","termid":"PBO:0052635"}


id: GO:2000725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell differentiation","synonyms":[{"name":"regulation of cardiomyocyte differentiation","type":"exact"},{"name":"regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000725"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: GO:0004219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyroglutamyl-peptide + H2O = pyroglutamate + peptide.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete pyroglutamyl-peptidase I activity (obsolete GO:0004219)","synonyms":[{"name":"pyroglutamyl-peptidase I activity","type":"exact"}],"termid":"GO:0004219"}


id: PBO:0072815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 10","termid":"PBO:0072815"}


id: GO:1904176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of carbon phosphorus lyase activity.","definition_xrefs":["PMID:23830682","PMID:17993513","PMID:22089136","GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:21705661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"carbon phosphorus lyase complex","termid":"GO:1904176"}


id: GO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminomuconate + H2O + H+ = (Z)-5-oxohex-2-enedioate + NH4.","definition_xrefs":["EC:3.5.99.5","RHEA:20996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"2-aminomuconate deaminase activity","secondary_identifiers":["KEGG_REACTION:R03887","MetaCyc:3.5.99.5-RXN"],"synonyms":[{"name":"2-aminomuconate aminohydrolase activity","type":"related"}],"termid":"GO:0050540"}


id: GO:0044224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of an axon near a node of Ranvier that is between the paranode and internode regions.","definition_xrefs":["GOC:jl","GOC:BHF","PMID:10624965","PMID:14682359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"juxtaparanode region of axon","secondary_identifiers":["NIF_Subcellular:sao758620702"],"synonyms":[{"name":"juxta paranode axon","type":"related"},{"name":"juxtaparanodal region","type":"exact"},{"name":"juxtaparanode","type":"exact"}],"termid":"GO:0044224"}


id: GO:0102452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 4-coumaryl-CoA + malonyl-CoA + H2O + H+ = 3 coenzyme A + bisdemethoxycurcumin + 2 carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bisdemethoxycurcumin synthase activity","secondary_identifiers":["MetaCyc:RXN-13958","RHEA:34803"],"termid":"GO:0102452"}


id: SO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-formyl-2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_formyl_two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:095"],"synonyms":[{"name":"5-formyl-2'-O-methylcytidine","type":"exact"},{"name":"f5Cm","type":"exact"},{"name":"five formyl two prime O methylcytidine","type":"exact"}],"termid":"SO:0001293"}


id: PBO:0058352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4725","termid":"PBO:0058352"}


id: FYPO:0004459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more translation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of translation gene mRNA during nitrogen starvation","synonyms":[{"name":"increased level of translation gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of translation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of translation gene transcripts nitrogen starvation","type":"exact"},{"name":"increased translation gene mRNA accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004459"}


id: RO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of","termid":"RO:0002215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enables","termid":"RO:0002327"}


id: PBO:0005887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine, mitochondrial","termid":"PBO:0005887"}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: GO:0030079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bacteriochlorophyll a binding complex that is peripherally associated to the bacterial reaction center.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}


id: FYECO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lithium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Li ions","synonyms":[{"name":"lithium ions added","type":"exact"}],"termid":"FYECO:0000093"}


id: GO:0022018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: PBO:0034736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs120","termid":"PBO:0034736"}


id: PBO:0056192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A4","termid":"PBO:0056192"}


id: GO:1902663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23444136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"down regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"inhibition of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902663"}


id: PBO:0046166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF3 antisense RNA 1","termid":"PBO:0046166"}


id: GO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plant acquires the ability to respond to a floral inductive signal.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of plant reproductive competence","synonyms":[{"name":"acquisition of reproductive competence","type":"broad"}],"termid":"GO:0010049"}


id: PBO:0053351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 242","termid":"PBO:0053351"}


id: GO:2001206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of osteoclast differentiation","termid":"GO:0045672"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"positively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast development","synonyms":[{"name":"positive regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001206"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: PR:O74515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cia1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone cia1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.05c","synonyms":[{"name":"Spom972h-cia1","type":"exact"},{"name":"anti-silencing function protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74515"}


id: PBO:0076249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 polycomb repressive complex 2 subunit","termid":"PBO:0076249"}


id: PBO:0051232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-30-21 (pseudogene)","termid":"PBO:0051232"}


id: PBO:0028000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_spherical_vegetative_cell","termid":"PBO:0028000"}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: GO:0062123
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98412],"is_not":false,"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element maturation.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of linear element assembly","termid":"GO:0090006"},{"relation_name":"regulates","term_name":"linear element maturation","termid":"GO:0062121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"regulation of linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062123","terms_by_termid":{"GO:0062123":null}}


id: PBO:0026998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_exit_from_mitosis","termid":"PBO:0026998"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: GO:0061624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose that results in the formation of dihydroxyacetone phosphate and glyceraldehyde-3-phosphate.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate","termid":"GO:0061624"}


id: GO:0004126
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85263],"is_not":false,"summary":null,"term":"GO:0004126"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine + H+ + H2O = uridine + NH4 and deoxycytidine + H+ + H2O = deoxyuridine + NH4+.","definition_xrefs":["EC:3.5.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"cytidine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9817513","Reactome:R-HSA-83677","Reactome:R-HSA-73608"],"synonyms":[{"name":"(deoxy)cytidine deaminase activity","type":"exact"},{"name":"cytidine aminohydrolase activity","type":"related"},{"name":"cytosine nucleoside deaminase activity","type":"related"},{"name":"deoxycytidine deaminase activity","type":"related"}],"termid":"GO:0004126","terms_by_termid":{"GO:0004126":null}}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["PubMed:2989287","ChEBI:30013","DeltaMass:0","PubMed:6692818","RESID:AA0017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: GO:0006883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sodium ions within a cell.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular sodium ion homeostasis","synonyms":[{"name":"cellular sodium ion homeostasis","type":"exact"}],"termid":"GO:0006883"}


id: GO:0005216
data:
  {"annotated_genes":["SJAG_MIT37","SJAG_MIT15","SJAG_00048","SJAG_03925","SJAG_02598","SJAG_04122","SJAG_03895","SJAG_02019","SJAG_02564","SJAG_00915","SJAG_01090","SJAG_01168","SJAG_MIT09","SJAG_00133","SJAG_05204","SJAG_07003","SJAG_00836","SJAG_04668","SJAG_02532","SJAG_00438","SJAG_00985","SJAG_02877","SJAG_03114","SJAG_02322","SJAG_05229","SJAG_05342","SJAG_02105","SJAG_00542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110440,88449,91730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[105370,92028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[107668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[95652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[99784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[91732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[103813,88900,85201,99669,101002,89322,90889,104788,97838,103903,88901,89918,115049,115061,99051,111848,115055,99699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[88450,109937,88391,95653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[85565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a monoatomic ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).","definition_xrefs":["GOC:mtg_transport","GOC:cy","GOC:pr","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"},{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04668":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ion channel activity","type":"broad"}],"termid":"GO:0005216","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: PBO:0046617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 2","termid":"PBO:0046617"}


id: GO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetate + ATP + CoA = AMP + diphosphate + 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity","secondary_identifiers":["EC:6.2.1.38","RHEA:33419"],"termid":"GO:0018855"}


id: PBO:0031841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_endoplasmic_reticulum_morphology","termid":"PBO:0031841"}


id: GO:0102065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + gamma-patchoulene.","definition_xrefs":["EC:4.2.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"patchoulene synthase activity","secondary_identifiers":["MetaCyc:RXN-10602"],"termid":"GO:0102065"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["GOC:yaf","PMID:18431508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: PBO:0088560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi family nuclear import carrier Opi10","termid":"PBO:0088560"}


id: PBO:0074474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMU1 DNA replication regulator and spliceosomal factor","termid":"PBO:0074474"}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: PBO:0111443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid family peptidase Rbd3","termid":"PBO:0111443"}


id: GO:0002917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"regulates","term_name":"peripheral B cell anergy","termid":"GO:0002453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral B cell anergy","termid":"GO:0002917"}


id: PBO:0050202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 19","termid":"PBO:0050202"}


id: PBO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat","termid":"PBO:0051871"}


id: PBO:0046690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein regulatory factor 1","termid":"PBO:0046690"}


id: GO:0061345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via effectors other than beta-catenin and contributing to a cardioblast being committed to a cardiac muscle cell fate.","definition_xrefs":["PMID:16860783","GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway, planar cell polarity pathway","termid":"GO:0060071"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway involved in heart development","termid":"GO:0061341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"planar cell polarity pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061345"}


id: PBO:0049659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 13","termid":"PBO:0049659"}


id: GO:0047683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic aldehyde + NADP+ + AMP + diphosphate + H2O = an aromatic acid + NADPH + ATP.","definition_xrefs":["RHEA:19229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aryl-aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.2.1.30-RXN","EC:1.2.1.30"],"synonyms":[{"name":"aromatic acid reductase activity","type":"related"},{"name":"aryl-aldehyde:NADP+ oxidoreductase (ATP-forming)","type":"related"}],"termid":"GO:0047683"}


id: PBO:0039756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APP divergent transcript","termid":"PBO:0039756"}


id: PBO:0111337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, symplekin scaffold subunit Pta1","termid":"PBO:0111337"}


id: GO:0033333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fin development","termid":"GO:0033333"}


id: PBO:0000675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family (predicted)","termid":"PBO:0000675"}


id: FYPO:0000243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on proline nitrogen source","synonyms":[{"name":"growth defect, normal growth with proline nitrogen source","type":"related"},{"name":"normal cell population growth on proline nitrogen source","type":"exact"},{"name":"normal vegetative cell population growth on proline nitrogen source","type":"exact"}],"termid":"FYPO:0000243"}


id: PBO:0110236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex/ Las1 complex endonuclease Las1","termid":"PBO:0110236"}


id: FYPO:0003825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","termid":"FYPO:0005689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation","synonyms":[{"name":"inviable binucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition before cell separation during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with cell cycle arrest in mitotic G2 phase before cell separation","type":"related"},{"name":"inviable binucleate aseptate cell with mitotic G2/M phase transition arrest before cell separation","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cytokinesis","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest at G2/M phase transition before cell separation","type":"exact"},{"name":"inviable binucleate cell with mitotic cell cycle arrest at G2/M before division septum assembly","type":"exact"},{"name":"inviable cell with mitotic G2/M arrest after failed cytokinesis","type":"related"},{"name":"inviable cell with nuclear division arrest at G2/M without septation (normal cell length)","type":"exact"},{"name":"lethal; binucleate aseptate cell with mitotic cell cycle arrest at G2/M before cell separation","type":"exact"},{"name":"mitotic cell cycle arrest at G2/M before cell separation with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0003825"}


id: GO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: PBO:0061266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notum, palmitoleoyl-protein carboxylesterase","termid":"PBO:0061266"}


id: PBO:0068336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 44","termid":"PBO:0068336"}


id: PBO:0055788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase","termid":"PBO:0055788"}


id: GO:0097235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:1899286"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097235)","termid":"GO:0097235"}


id: PBO:0086094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las17p and with the SH3 domains of Type I myosins Myo3p and Myo5p; localized predominantly to cortical actin patches","termid":"PBO:0086094"}


id: PBO:0030244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_freezing","termid":"PBO:0030244"}


id: PATO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality restricted to a particular wavelength.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"albedo","termid":"PATO:0001295"}


id: GO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chenodeoxycholoyltaurine + H2O = chenodeoxycholate + taurine.","definition_xrefs":["EC:3.5.1.74","MetaCyc:CHENODEOXYCHOLOYLTAURINE-HYDROLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"chenodeoxycholoyltaurine hydrolase activity","secondary_identifiers":["RHEA:16309"],"synonyms":[{"name":"chenodeoxycholoyltaurine amidohydrolase activity","type":"related"}],"termid":"GO:0047742"}


id: PBO:0090244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIK complex ubiquitin-protein ligase E3 subunit, Pmh1","termid":"PBO:0090244"}


id: PBO:0082708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0082708"}


id: PBO:0045169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 3","termid":"PBO:0045169"}


id: PBO:0001420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt3","termid":"PBO:0001420"}


id: PBO:0062713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily J member 1","termid":"PBO:0062713"}


id: GO:0051701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An interaction between two organisms living together in more or less intimate association. The term host is used for the larger (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interaction with host","secondary_identifiers":["GO:0044119","GO:0044121","GO:0044112","GO:0044123","GO:0044125","GO:0044116","GO:0044117"],"synonyms":[{"name":"growth of symbiont in host","type":"narrow"},{"name":"growth of symbiont in host cell","type":"narrow"},{"name":"growth of symbiont in host organelle","type":"narrow"},{"name":"growth of symbiont in host vacuole","type":"narrow"},{"name":"interaction with host","type":"exact"}],"termid":"GO:0051701"}


id: PBO:0041918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR1 antisense RNA 1","termid":"PBO:0041918"}


id: PR:O14190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.02c","secondary_identifiers":["UniProtKB:O14190"],"synonyms":[{"name":"Spom972h-ALG13","type":"exact"},{"name":"asparagine-linked glycosylation protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14190"}


id: PBO:0059705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 13","termid":"PBO:0059705"}


id: PBO:0039331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3 pseudogene 1","termid":"PBO:0039331"}


id: PBO:0042542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 1","termid":"PBO:0042542"}


id: PBO:0091433
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of N7-methylguanine = 2.6 x 10^-3 s-1","termid":"PBO:0091433"}


id: PR:O13911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional polynucleotide phosphatase/kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00882","PRO:DNx","PANTHER:PTHR12083:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional polynucleotide phosphatase/kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.04c","secondary_identifiers":["UniProtKB:O13911"],"synonyms":[{"name":"DNA 5'-kinase/3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNKP","type":"exact"},{"name":"polynucleotide kinase-3'-phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13911"}


id: GO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species biosynthetic process","termid":"GO:1903428"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"positive regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010729"}


id: GO:0150177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150177"}


id: PBO:0089008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VI","termid":"PBO:0089008"}


id: PBO:0053835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1100","termid":"PBO:0053835"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: GO:0072258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial fibroblasts of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast differentiation","synonyms":[{"name":"metanephros interstitial cell differentiation","type":"exact"}],"termid":"GO:0072258"}


id: GO:0080118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a brassinosteroid + 3'-phosphoadenosine-5'-phosphosulfate = sulfated brassinosteroid + adenosine-3',5'-diphosphate. This reaction is the transfer of a sulfate group to the hydroxyl group of a brassinosteroid acceptor, producing the sulfated brassinosteroid derivative.","definition_xrefs":["PMID:10409637","PMID:17039368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"brassinosteroid sulfotransferase activity","termid":"GO:0080118"}


id: PBO:0003790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 co-chaperone Cdc37","termid":"PBO:0003790"}


id: PBO:0064921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3C","termid":"PBO:0064921"}


id: FYPO:0001584
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"}],"single_locus_phenotype":[{"annotations":[115448,115326,115445,115446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005503"},{"annotations":[115447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_01143":null,"SJAG_01794":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_02392"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell end during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001584","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null,"FYPO:0005503":null}}


id: GO:2000858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of aldosterone secretion","termid":"GO:2000858"}


id: PBO:0074659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 48B","termid":"PBO:0074659"}


id: PBO:0036257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2 (predicted)","termid":"PBO:0036257"}


id: GO:0009166
data:
  {"annotated_genes":["SJAG_04487","SJAG_02135","SJAG_03373","SJAG_03828","SJAG_05314","SJAG_00685","SJAG_04169","SJAG_04192","SJAG_02247","SJAG_02481","SJAG_02796","SJAG_03852","SJAG_06622","SJAG_04495","SJAG_02009","SJAG_03903","SJAG_00461","SJAG_02107","SJAG_06621","SJAG_03091","SJAG_00605","SJAG_02945","SJAG_00633","SJAG_04939","SJAG_04048","SJAG_03676","SJAG_04870","SJAG_02369","SJAG_01310","SJAG_00839","SJAG_00027","SJAG_04334","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901911"},{"annotations":[112394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"},{"annotations":[112364,94303,101455,105390,104929,94033,104925,101820,99399,105388,104928,105389,105392,104924,90575,105387,101453,91060,101454,99655,101819,104927,100471,104923,104926,105391,105393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015938"},{"annotations":[84782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901909"},{"annotations":[84783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"},{"annotations":[113096,107452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"},{"annotations":[95010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[95012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[100473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107581,94221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[101107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[101109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[72107,74925],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[109971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02481":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04169":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04487":null,"SJAG_04495":null,"SJAG_04870":null,"SJAG_04939":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleotide breakdown","type":"exact"},{"name":"nucleotide catabolism","type":"exact"},{"name":"nucleotide degradation","type":"exact"}],"termid":"GO:0009166","terms_by_termid":{"GO:0006096":null,"GO:0006198":null,"GO:0006256":null,"GO:0006742":null,"GO:0015938":null,"GO:0015964":null,"GO:0019677":null,"GO:0035863":null,"GO:0045820":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1901907":null,"GO:1901909":null,"GO:1901911":null}}


id: PBO:0045699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 4","termid":"PBO:0045699"}


id: PBO:0085573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO","termid":"PBO:0085573"}


id: GO:0032355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["ISBN:0911910123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estradiol","synonyms":[{"name":"response to E2 stimulus","type":"exact"},{"name":"response to estradiol stimulus","type":"exact"}],"termid":"GO:0032355"}


id: GO:1905586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24472721","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"regulation of outer hair cell apoptotic process","termid":"GO:1905585"},{"relation_name":"negatively_regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of outer hair cell apoptotic process","synonyms":[{"name":"down regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down regulation of outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"down-regulation of outer hair cell apoptosis","type":"narrow"},{"name":"down-regulation of outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"downregulation of outer hair cell apoptosis","type":"narrow"},{"name":"downregulation of outer hair cell apoptotic process","type":"exact"},{"name":"inhibition of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of cochlear outer hair cell apoptotic process","type":"narrow"},{"name":"inhibition of outer hair cell apoptosis","type":"narrow"},{"name":"inhibition of outer hair cell apoptotic process","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"negative regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"negative regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905586"}


id: PBO:0038517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2","termid":"PBO:0038517"}


id: GO:1990483
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex involved in chromatin organization. In Schizosaccharomyces pombe this complex consists of Clr6, Nts1, Mug165, and Png3.","definition_xrefs":["PMID:25002536"],"gene_count":0,"genotype_count":0,"name":"obsolete Clr6 histone deacetylase complex I'' (obsolete GO:1990483)","termid":"GO:1990483"}


id: PBO:0066194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 14","termid":"PBO:0066194"}


id: GO:0035882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythmic process of defecation that consists of an intestinal oscillator which regulates calcium waves. These waves in turn control a stereotypical, three-part pattern of muscle contractions. In some organisms, defecation can recur with a regularity more frequent than every 24 hours. For example, in a well-fed Caenorhabditis elegans, the defecation motor program occurs approximately every 45 seconds, and is temperature- and touch-compensated.","definition_xrefs":["GOC:kmv","GOC:bf","PMID:7479775","PMID:8158250","PMID:9066270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ultradian rhythm","termid":"GO:0007624"},{"relation_name":"part_of","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defecation rhythm","synonyms":[{"name":"DMP","type":"exact"},{"name":"defecation behavior","type":"related"},{"name":"defecation cycle","type":"exact"},{"name":"defecation motor program","type":"exact"}],"termid":"GO:0035882"}


id: PBO:0003776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr2","termid":"PBO:0003776"}


id: GO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the site of cytokinesis in the bud neck of a budding cell; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins. In S. cerevisiae, this structure forms at the time of bud emergence and the septins show a high rate of exchange.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin ring","termid":"GO:0000144"}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: PBO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41","termid":"PBO:0080079"}


id: PBO:0055942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 51","termid":"PBO:0055942"}


id: PBO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Cut12","termid":"PBO:0003238"}


id: FYPO:0002516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins earlier than normal. The duration of G2 phase is thus shorter than normal. The mitotic G2/M transition is the point at which a cell commits to entering M phase, and begins when the kinase activity of M cyclin/CDK complex reaches a threshold high enough for the cell cycle to proceed.","definition_xrefs":["GO:0000086","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"premature mitosis","termid":"FYPO:0001046"},{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 phase progression","termid":"FYPO:0000563"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"premature mitotic G2/M phase transition","synonyms":[{"name":"advanced mitotic G2 phase progression","type":"related"},{"name":"advanced mitotic G2/M transition","type":"exact"},{"name":"cell cycle, mitotic G2 advance","type":"related"},{"name":"decreased duration of mitotic G2 phase","type":"related"},{"name":"decreased duration of mitotic G2 phase during vegetative growth","type":"related"},{"name":"decreased mitotic G2 duration","type":"related"},{"name":"increased rate of mitotic G2 phase progression","type":"related"},{"name":"mitotic G2 advance","type":"related"},{"name":"mitotic G2/M transition advance","type":"exact"},{"name":"mitotic G2/M transition advance during vegetative growth","type":"exact"},{"name":"mitotic cell cycle advance at G2/M transition","type":"exact"},{"name":"premature G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"premature mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"premature mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0002516"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: GO:0071522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ureidoglycine + H2O = S-ureidoglycolate + NH3.","definition_xrefs":["MetaCyc:URUR-RXN","PMID:19935661","PMID:20038185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"ureidoglycine aminohydrolase activity","secondary_identifiers":["EC:3.5.3.26","RHEA:25241"],"termid":"GO:0071522"}


id: RO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between a continuant and a process, in which the continuant is somehow involved in the process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in","termid":"RO:0000056"}


id: PBO:0056412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 9","termid":"PBO:0056412"}


id: PBO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_organization","termid":"PBO:0031033"}


id: PBO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b (predicted)","termid":"PBO:0036311"}


