# genes

id: SPCC18.04
data:
  {"cv_annotations":{},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"gene","flags":["not_load_organism"],"genes_by_uniquename":{"SJAG_02753":null,"SPCC18.04":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:1.20.1280.50","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":107,"score":3.000000106112566e-7,"start":10}],"model":"2ovrB01","name":""},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF07393","interpro_id":"IPR048627","interpro_name":"Exocyst complex component Sec10-like, alpha-helical bundle","interpro_type":"Domain","locations":[{"end":860,"score":0.0,"start":208}],"model":"PF07393","name":"Exocyst complex component Sec10-like, alpha-helical bundle"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF12937","interpro_id":"IPR001810","interpro_name":"F-box domain","interpro_type":"Domain","locations":[{"end":70,"score":0.0015999999595806003,"start":38}],"model":"PF12937","name":"F-box-like"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12100","interpro_id":"IPR009976","interpro_name":"Exocyst complex component Sec10-like","interpro_type":"Family","locations":[{"end":860,"score":0.0,"start":47}],"model":"PTHR12100:SF1","name":"SEC10"},{"dbname":"SMART","evidence":"Smart scan","id":"SM00256","interpro_id":"IPR001810","interpro_name":"F-box domain","interpro_type":"Domain","locations":[{"end":73,"score":7.700000281829489e-8,"start":33}],"model":"SM00256","name":"A Receptor for Ubiquitination Targets"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF81383","interpro_id":"IPR036047","interpro_name":"F-box-like domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":82,"score":1.5699999522666985e-8,"start":30}],"model":"0041352","name":"F-box domain"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd22139","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":74,"score":2.6036999975758562e-14,"start":30}],"model":"cd22139","name":"F-box domain found in uncharacterized F-box protein group similar to F-box only protein 3 (FBXO3)"}],"name":"pof6","ortholog_annotations":[{"gene_uniquename":"SPCC18.04","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_02753","reference_uniquename":"PMID:21511999"}],"product":"exocyst complex subunit Exo5-like, F-box protein Pof6","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74854","uniquename":"SPCC18.04"}


id: SPCC18.05c
data:
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repeats"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF117289","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":258,"score":4.710000105213738e-29,"start":125}],"model":"0050981","name":"Nucleoporin domain"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50978","interpro_id":"IPR036322","interpro_name":"WD40-repeat-containing domain superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":501,"score":0.0,"start":217}],"model":"0047077","name":"WD40 repeat-like"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd00200","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":501,"score":0.0,"start":169}],"model":"cd00200","name":""}],"name":"rsa4","ortholog_annotations":[{"gene_uniquename":"SPCC18.05c","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_02754","reference_uniquename":"PMID:21511999"}],"product":"notchless-like ribosome biogenesis protein Rsa4","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74855","uniquename":"SPCC18.05c"}


id: SPCC18.06c
data:
  {"cv_annotations":{},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"gene","flags":["not_load_organism"],"genes_by_uniquename":{"SJAG_04407":null,"SPCC18.06c":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.420.10","interpro_id":"IPR036397","interpro_name":"Ribonuclease H superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":274,"score":0.0,"start":20}],"model":"2p51A00","name":"Ribonuclease H-like superfamily/Ribonuclease H"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF04857","interpro_id":"IPR006941","interpro_name":"Ribonuclease CAF1","interpro_type":"Family","locations":[{"end":145,"score":1.1999999882661427e-9,"start":28},{"end":229,"score":0.002400000113993883,"start":164}],"model":"PF04857","name":"CAF1 family ribonuclease"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR10797","interpro_id":"IPR039637","interpro_name":"CCR4-NOT transcription complex subunit 7/8/Pop2","interpro_type":"Family","locations":[{"end":277,"score":0.0,"start":25}],"model":"PTHR10797:SF0","name":"CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF53098","interpro_id":"IPR012337","interpro_name":"Ribonuclease H-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":271,"score":0.0,"start":24}],"model":"0053802","name":"Ribonuclease H-like"}],"name":"caf1","ortholog_annotations":[{"gene_uniquename":"SPCC18.06c","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_04407","reference_uniquename":"PMID:21511999"}],"product":"CCR4-Not complex CAF1 family ribonuclease subunit 7/8","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74856","uniquename":"SPCC18.06c"}


id: SPCC18.07
data:
  {"cv_annotations":{},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"gene","flags":["not_load_organism"],"genes_by_uniquename":{"SJAG_04408":null,"SPCC18.07":null},"has_protein_features":false,"interpro_matches":[{"dbname":"PFAM","evidence":"HMMPfam","id":"PF05132","interpro_id":"IPR007811","interpro_name":"DNA-directed RNA polymerase III subunit RPC4","interpro_type":"Family","locations":[{"end":330,"score":3.400000131152283e-27,"start":196}],"model":"PF05132","name":"RNA polymerase III RPC4"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR13408","interpro_id":"IPR007811","interpro_name":"DNA-directed RNA polymerase III subunit RPC4","interpro_type":"Family","locations":[{"end":330,"score":1.5999999857561263e-36,"start":2}],"model":"PTHR13408:SF0","name":"DNA-DIRECTED RNA POLYMERASE III"}],"name":"rpc53","ortholog_annotations":[{"gene_uniquename":"SPCC18.07","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_04408","reference_uniquename":"PMID:21511999"}],"product":"DNA-directed RNA polymerase III complex subunit Rpc53","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74857","uniquename":"SPCC18.07"}


id: SPCC18.08
data:
  {"cv_annotations":{},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"gene","flags":["not_load_organism"],"genes_by_uniquename":{"SJAG_04409":null,"SPCC18.08":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:2.40.50.140","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":179,"score":9.900000211949593e-28,"start":29}],"model":"6hcuB01","name":"Nucleic acid-binding proteins"},{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.930.10","interpro_id":"IPR045864","interpro_name":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_type":"Homologous_superfamily","locations":[{"end":531,"score":0.0,"start":180}],"model":"4upaA02","name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF00152","interpro_id":"IPR004364","interpro_name":"Aminoacyl-tRNA synthetase, class II (D/K/N)","interpro_type":"Domain","locations":[{"end":527,"score":0.0,"start":183}],"model":"PF00152","name":"tRNA synthetases class II (D, K and N)"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01336","interpro_id":"IPR004365","interpro_name":"OB-fold nucleic acid binding domain, AA-tRNA synthetase-type","interpro_type":"Domain","locations":[{"end":165,"score":2.2999999682582484e-9,"start":84}],"model":"PF01336","name":"OB-fold nucleic acid binding domain"},{"dbname":"PRINTS","evidence":"FPrintScan","id":"PR00982","interpro_id":"IPR018149","interpro_name":"Lysyl-tRNA synthetase, class II, C-terminal","interpro_type":"Domain","locations":[{"end":229,"score":2.1999999317447306e-30,"start":219},{"end":251,"score":2.1999999317447306e-30,"start":235},{"end":276,"score":2.1999999317447306e-30,"start":263},{"end":298,"score":2.1999999317447306e-30,"start":281},{"end":423,"score":2.1999999317447306e-30,"start":407}],"model":"PR00982","name":""},{"dbname":"PROFILE","evidence":"PrfScan","id":"PS50862","interpro_id":"IPR006195","interpro_name":"Aminoacyl-tRNA synthetase, class II","interpro_type":"Domain","locations":[{"end":524,"score":0.0,"start":209}],"model":"PS50862","name":"Aminoacyl-transfer RNA synthetases class-II family profile"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR42918","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":529,"score":0.0,"start":24}],"model":"PTHR42918:SF9","name":"LYSYL-TRNA SYNTHETASE"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF50249","interpro_id":"IPR012340","interpro_name":"Nucleic acid-binding, OB-fold","interpro_type":"Homologous_superfamily","locations":[{"end":177,"score":1.2699999596972136e-20,"start":32}],"model":"0045922","name":"Nucleic acid-binding proteins"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF55681","interpro_id":"IPR045864","interpro_name":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_type":"Homologous_superfamily","locations":[{"end":525,"score":0.0,"start":182}],"model":"0035444","name":"Class II aaRS and biotin synthetases"},{"dbname":"NCBIFAM","evidence":"HMMPfam","id":"TIGR00499","interpro_id":"IPR002313","interpro_name":"Lysine-tRNA ligase, class II","interpro_type":"Family","locations":[{"end":529,"score":0.0,"start":68}],"model":"TIGR00499","name":"lysine--tRNA ligase"},{"dbname":"CDD","evidence":"RPS-BLAST","id":"cd04322","interpro_id":"IPR044136","interpro_name":"Lysine-tRNA ligase, class II, N-terminal","interpro_type":"Domain","locations":[{"end":194,"score":2.723760059584118e-31,"start":83}],"model":"cd04322","name":""}],"name":"msk1","ortholog_annotations":[{"gene_uniquename":"SPCC18.08","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_04409","reference_uniquename":"PMID:21511999"}],"product":"mitochondrial lysine-tRNA ligase Msk1","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74858","uniquename":"SPCC18.08"}


id: SPCC18.09c
data:
  {"cv_annotations":{},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"gene","flags":["not_load_organism"],"genes_by_uniquename":{"SJAG_04410":null,"SPCC18.09c":null},"has_protein_features":false,"interpro_matches":[{"dbname":"CATHGENE3D","evidence":"HMMPfam","id":"G3DSA:3.30.428.10","interpro_id":"IPR036265","interpro_name":"HIT-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":232,"score":0.0,"start":33}],"model":"4xbaB00","name":"HIT-like"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF01230","interpro_id":"IPR011146","interpro_name":"HIT-like domain","interpro_type":"Domain","locations":[{"end":155,"score":4.800000054469661e-18,"start":45}],"model":"PF01230","name":"HIT domain"},{"dbname":"PFAM","evidence":"HMMPfam","id":"PF16278","interpro_id":"IPR032566","interpro_name":"Aprataxin, C2HE/C2H2/C2HC zinc finger","interpro_type":"Domain","locations":[{"end":223,"score":1.999999987845058e-8,"start":170}],"model":"PF16278","name":"C2HE / C2H2 / C2HC zinc-binding finger"},{"dbname":"PANTHER","evidence":"HMMPfam","id":"PTHR12486","interpro_id":"","interpro_name":"","interpro_type":"","locations":[{"end":222,"score":8.300000307263088e-34,"start":31}],"model":"PTHR12486:SF4","name":"APRATAXIN-RELATED"},{"dbname":"SSF","evidence":"HMMPfam","id":"SSF54197","interpro_id":"IPR036265","interpro_name":"HIT-like superfamily","interpro_type":"Homologous_superfamily","locations":[{"end":203,"score":1.1699999628706614e-20,"start":37}],"model":"0044881","name":"HIT-like"}],"name":"hnt3","ortholog_annotations":[{"gene_uniquename":"SPCC18.09c","ortholog_taxonid":4897,"ortholog_uniquename":"SJAG_04410","reference_uniquename":"PMID:21511999"}],"product":"aprataxin Hnt3","references_by_uniquename":{"PMID:21511999":null},"taxonid":4896,"taxonomic_distribution":"not curated","transcript_so_termid":null,"uniprot_identifier":"O74859","uniquename":"SPCC18.09c"}


id: SPCC18.10
data:
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id: SPCC18.11c
data:
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id: SPCC18.12c
data:
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id: SPCC18.13
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id: SPCC18.14c
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id: SPCC18.15
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id: SPCC18.16c
data:
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id: SPCC18.17c
data:
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id: SPCC18.18c
data:
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id: SPCC18.19c
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id: SPCC18.20
data:
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id: SPCC1827.01c
data:
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id: SPCC1827.02c
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id: SPCC1827.03c
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id: SPCC1827.04
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id: SPCC1827.05c
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id: SPCC1827.06c
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id: SPCC1827.07c
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id: SPCC1827.08c
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id: SPCC1840.01c
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id: SPCC1840.02c
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id: SPCC1840.03
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id: SPCC1840.04
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id: SPCC1840.05c
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id: SPCC1840.06
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id: SPCC1840.07c
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id: SPCC1840.08c
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id: SPCC1840.09
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id: SPCC1840.10
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id: SPCC1840.11
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id: SPCC1840.12
data:
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id: SPCC1840.13
data:
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id: SPCC188.02
data:
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id: SPCC188.03
data:
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id: SPCC188.04c
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id: SPCC188.06c
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id: SPCC188.07
data:
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id: SPCC188.08c
data:
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id: SPCC188.09c
data:
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id: SPCC188.11
data:
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id: SPCC188.12
data:
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id: SPCC188.13c
data:
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id: SPCC188.14
data:
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id: SPCC1884.01
data:
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id: SPCC1884.02
data:
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id: SPCC18B5.01c
data:
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id: SPCC18B5.03
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id: SPCC18B5.04
data:
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id: SPCC18B5.05c
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id: SPCC18B5.06
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id: SPCC18B5.07c
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id: SPCC18B5.08c
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id: SPCC18B5.09c
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id: SPCC18B5.10c
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id: SPCC18B5.11c
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id: SPCC1902.01
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id: SPCC1902.02
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id: SPCC1906.01
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id: SPCC1906.02c
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id: SPCC1906.03
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id: SPCC1906.04
data:
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id: SPCC191.01
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id: SPCC191.02c
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id: SPCC191.03c
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id: SPCC191.04c
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id: SPCC191.05c
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id: SPCC191.06
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id: SPCC191.07
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id: SPCC191.08
data:
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id: SPCC191.09c
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id: SPCC191.10
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id: SPCC191.11
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id: SPCC1919.01
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id: SPCC1919.02
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id: SPCC1919.03c
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id: SPCC1919.04
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id: SPCC1919.05
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id: SPCC1919.06c
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id: SPCC1919.07
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id: SPCC1919.08c
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id: SPCC1919.09
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id: SPCC1919.10c
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id: SPCC1919.11
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id: SPCC1919.12c
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id: SPCC1919.13c
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id: SPCC1919.14c
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id: SPCC1919.15
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id: SPCC23B6.01c
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id: SPCC23B6.02c
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id: SPCC23B6.03c
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id: SPCC23B6.04c
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id: SPCC23B6.05c
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id: SPCC24B10.02c
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id: SPCC24B10.03
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id: SPCC24B10.04
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id: SPCC24B10.05
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id: SPCC24B10.06
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id: SPCC24B10.07
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id: SPCC24B10.08c
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id: SPCC24B10.09
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id: SPCC24B10.10c
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id: SPCC24B10.11c
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id: SPCC24B10.12
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id: SPCC24B10.13
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id: SPCC24B10.14c
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id: SPCC24B10.15
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id: SPCC24B10.16c
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id: SPCC24B10.17
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id: SPCC24B10.18
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id: SPCC24B10.19c
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id: SPCC24B10.20
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id: SPCC24B10.21
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id: SPCC24B10.22
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id: SPCC285.03
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id: SPCC285.04
data:
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id: SPCC285.05
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id: SPCC285.07c
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id: SPCC285.08
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id: SPCC285.09c
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id: SPCC285.10c
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id: SPCC285.11
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id: SPCC285.12
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id: SPCC285.13c
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id: SPCC285.14
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id: SPCC285.15c
data:
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id: SPCC285.16c
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id: SPCC285.17
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id: SPCC290.02
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id: SPCC290.03c
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id: SPCC290.04
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id: SPCC297.03
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id: SPCC297.04c
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id: SPCC297.05
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id: SPCC297.06c
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id: SPCC2H8.02
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id: SPCC2H8.04
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id: SPCC2H8.05c
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id: SPCC306.02c
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id: SPCC306.03c
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id: SPCC306.04c
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id: SPCC306.05c
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id: SPCC306.06c
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id: SPCC306.07c
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id: SPCC306.08c
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id: SPCC306.09c
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id: SPCC306.11
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id: SPCC31H12.02c
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id: SPCC31H12.03c
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id: SPCC31H12.04c
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id: SPCC31H12.05c
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id: SPCC31H12.06
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id: SPCC31H12.07
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id: SPCC31H12.08c
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id: SPCC320.03
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id: SPCC320.04c
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