# terms

id: PBO:0059182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoregulin","termid":"PBO:0059182"}


id: GO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein toxin (obsolete GO:0015641)","synonyms":[{"name":"lipoprotein toxin","type":"exact"}],"termid":"GO:0015641"}


id: PATO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock.","definition_xrefs":["PATOC:flybase"],"direct_ancestors":[{"relation_name":"has_part","term_name":"paralysed","termid":"PATO:0000763"},{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bang sensitive","termid":"PATO:0000759"}


id: GO:0018416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of nickel into a 3Fe-2S complex by tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"nickel incorporation into metallo-sulfur cluster","termid":"GO:0018414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"nickel incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide","synonyms":[{"name":"nickel incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018416"}


id: PBO:0005315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L31 (predicted)","termid":"PBO:0005315"}


id: PBO:0004366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0004366"}


id: PBO:0016077
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dhp1 INteracting protein","termid":"PBO:0016077"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: PBO:0074935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 102","termid":"PBO:0074935"}


id: PBO:0002716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein, BUD22 family (predicted)","termid":"PBO:0002716"}


id: GO:1990461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of iron ion. These include transport of iron away from sensitive areas and to compartments or complexes whose purpose is sequestration of iron ion.","definition_xrefs":["PMID:23064556","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of iron ion","termid":"GO:1990461"}


id: PBO:0059885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 8","termid":"PBO:0059885"}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: SOFP:problem
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"True if the annotation for this feature is problematic in some way; more details can be found in the comments property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"problem","termid":"SOFP:problem"}


id: PBO:0047544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 3","termid":"PBO:0047544"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: GO:0048648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to environmental and/or genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination","termid":"GO:0048648"}


id: GO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral/basic amino acid(out) + Na+(out) + Cl-(out) = neutral/basic amino acid(in) + Na+(in) + Cl-(in).","definition_xrefs":["TC:2.A.22.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"neutral, basic amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral, cationic amino acid:sodium:chloride symporter activity","type":"related"}],"termid":"GO:0015374"}


id: MOD:01679
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha amino or imino hydrogen with a carbamoyl group.","definition_xrefs":["Unimod:5#N-term","OMSSA:32","DeltaMass:56","PubMed:10978403","PubMed:12203680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbamoylated residue","termid":"MOD:00398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-aminocarbamoylated residue","synonyms":[{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"related"},{"name":"N2CbmRes","type":"exact"},{"name":"ntermcarbamyl","type":"exact"}],"termid":"MOD:01679"}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GOC:TermGenie","PMID:22521784","GO_REF:0000060","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: GO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds that contain selenium, such as selenocysteine.","definition_xrefs":["PMID:12730456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenium compound metabolic process","synonyms":[{"name":"selenium compound metabolism","type":"exact"},{"name":"selenium metabolic process","type":"exact"},{"name":"selenium metabolism","type":"exact"}],"termid":"GO:0001887"}


id: PBO:0064753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 89","termid":"PBO:0064753"}


id: GO:0005624
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane fraction (obsolete GO:0005624)","synonyms":[{"name":"membrane fraction","type":"exact"}],"termid":"GO:0005624"}


id: PBO:0017822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 L associated factor 1 Laf1","termid":"PBO:0017822"}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107814],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191299","KEGG_REACTION:R02874","EC:1.14.14.17","MetaCyc:SQUALENE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: PATO:0000676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000676 relative temperature value (obsolete PATO:0000676)","termid":"PATO:0000676"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: GO:0038069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that contributes to cell wall biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of cell wall biogenesis (obsolete GO:0038069)","synonyms":[{"name":"Mpk1 phosphatase activity","type":"narrow"},{"name":"Slt2 phosphatase activity","type":"narrow"}],"termid":"GO:0038069"}


id: FYPO:0001432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethidium bromide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to ethidium bromide","synonyms":[{"name":"resistance to EtBr","type":"exact"},{"name":"resistance to ethidium bromide during mitotic cell cycle","type":"related"},{"name":"resistance to ethidium bromide during vegetative growth","type":"exact"},{"name":"resistant to ethidium bromide","type":"exact"}],"termid":"FYPO:0001432"}


id: PBO:0068059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 364","termid":"PBO:0068059"}


id: PATO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and orange hue with a slight amount of gray.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vermilion","termid":"PATO:0001302"}


id: PBO:0077607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 13","termid":"PBO:0077607"}


id: GO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + sugar phosphorylated on the terminal carbon = a sugar + phosphate.","definition_xrefs":["MetaCyc:SUGAR-TERMINAL-PHOSPHATASE-RXN","EC:3.1.3.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sugar-terminal-phosphatase activity","synonyms":[{"name":"sugar-omega-phosphate phosphohydrolase activity","type":"exact"},{"name":"xylitol-5-phosphatase activity","type":"narrow"}],"termid":"GO:0050309"}


id: PBO:0086061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; protein abundance increases in response to DNA replication stress; TMA10 has a paralog, STF2, that arose from the whole genome duplication","termid":"PBO:0086061"}


id: PBO:0017752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial methionine-tRNA ligase Msm1 (predicted)","termid":"PBO:0017752"}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: PBO:0068462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 39, pseudogene","termid":"PBO:0068462"}


id: FYPO:0004479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to salt stress.","definition_xrefs":["PMID:16928959","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to salt stress","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to salt stress","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to salt stress","type":"exact"}],"termid":"FYPO:0004479"}


id: GO:0106163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["GOC:vw","PMID:30601114"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106163)","termid":"GO:0106163"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz","EC:5.1.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-galactose 6-phosphate 1-epimerase activity","secondary_identifiers":["MetaCyc:RXN-14816"],"termid":"GO:0102541"}


id: PBO:0067925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 227","termid":"PBO:0067925"}


id: PBO:0038902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRB3 divergent transcript","termid":"PBO:0038902"}


id: GO:0097489
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the multivesicular body internal vesicle.","definition_xrefs":["PMID:21183070","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle lumen","termid":"GO:0031983"},{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"multivesicular body, internal vesicle","termid":"GO:0097487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"multivesicular body, internal vesicle lumen","termid":"GO:0097489"}


id: GO:0051878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which lateral elements are formed. Axial elements form a proteinaceous core between the two sister chromatids of each chromosome; the two axial elements then connect along their entire lengths by fine fibers known as transverse filaments, forming the lateral elements.","definition_xrefs":["PMID:11463847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"synaptonemal complex assembly","termid":"GO:0007130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"lateral element assembly","termid":"GO:0051878"}


id: MOD:01324
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:7744761","Unimod:254#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +26","termid":"MOD:00577"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26 - site H","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:01324"}


id: PBO:0030097
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_binding","termid":"PBO:0030097"}


id: GO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal snRNP complex that is formed by the association of the U4atac/U6atac and U5 snRNPs.","definition_xrefs":["GOC:krc","ISBN:0879695897","PMID:16201866","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U4atac/U6atac x U5 tri-snRNP complex","synonyms":[{"name":"U4atac/U6atac.U5 snRNP complex","type":"exact"}],"termid":"GO:0071009"}


id: GO:0032587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a ruffle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"ruffle","termid":"GO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"ruffle membrane","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0032587"}


id: GO:0009466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class I cytochrome c (obsolete GO:0009466)","synonyms":[{"name":"class I cytochrome c","type":"exact"}],"termid":"GO:0009466"}


id: PBO:0074056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 35","termid":"PBO:0074056"}


id: PBO:0072043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 13","termid":"PBO:0072043"}


id: PBO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf3 (predicted)","termid":"PBO:0001628"}


id: GO:0047870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-dimethylallyladenine + S-adenosyl-L-methionine(1+) = S-methyl-5'-thioadenosine + discadenine + H+.","definition_xrefs":["EC:2.5.1.24","RHEA:19581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"discadenine synthase activity","secondary_identifiers":["KEGG_REACTION:R03726","MetaCyc:DISCADENINE-SYNTHASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:6-N-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N6-(Delta2-isopentenyl)-adenine 3-(3-amino-3-carboxypropyl)-transferas","type":"related"},{"name":"discadenine synthetase activity","type":"related"}],"termid":"GO:0047870"}


id: GO:0050147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribosyl-base1 + base2 = D-ribosyl-base2 + base1.","definition_xrefs":["EC:2.4.2.5","MetaCyc:NUCLEOSIDE-RIBOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"nucleoside ribosyltransferase activity","synonyms":[{"name":"nucleoside N-ribosyltransferase activity","type":"related"},{"name":"nucleoside:purine(pyrimidine) D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050147"}


id: PBO:0047635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four-jointed box kinase 1","termid":"PBO:0047635"}


id: FYPO:0003152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during cellular response to heat","synonyms":[{"name":"increased protein accumulation during cellular response to heat","type":"related"},{"name":"increased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003152"}


id: PBO:0070211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 140 pseudogene","termid":"PBO:0070211"}


id: GO:0051401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calponin homology protein domain, a domain of 100 residues that occurs in signaling and cytoskeletal proteins.","definition_xrefs":["PMID:11911887","Prosite:PDOC50021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CH domain binding","synonyms":[{"name":"calponin homology domain binding","type":"exact"}],"termid":"GO:0051401"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0007095","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: PBO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Par A family ATPase/WD repeat iron cluster assembly fusion protein (predicted)","termid":"PBO:0000227"}


id: GO:0033571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactoferrin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lactoferrin transport","termid":"GO:0033571"}


id: PBO:0079671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 1","termid":"PBO:0079671"}


id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: PBO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter","termid":"PBO:0002123"}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: GO:0010943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NMNH + ADP.","definition_xrefs":["PMID:12790796","GOC:tb","RHEA:60820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH pyrophosphatase activity","termid":"GO:0010943"}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0056654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 21","termid":"PBO:0056654"}


id: FYPO:0006301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a ribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"},{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished ribonuclease activity","synonyms":[{"name":"ribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0006301"}


id: PBO:0005534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor class II eRF3","termid":"PBO:0005534"}


id: PBO:0039158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 5","termid":"PBO:0039158"}


id: PBO:0113031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen; involved in recognition of N-acetylglucosamine; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0113031"}


id: PBO:0066731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 28","termid":"PBO:0066731"}


id: PBO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine supersensitive","termid":"PBO:0012259"}


id: PBO:0053652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 705","termid":"PBO:0053652"}


id: GO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a caloric restriction, insufficient food energy intake.","definition_xrefs":["PMID:15520862","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to caloric restriction","termid":"GO:0061771"}


id: PBO:0064631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome proliferator activated receptor gamma","termid":"PBO:0064631"}


id: GO:0048918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line nerve over time, from its formation to the mature structure. The posterior lateral line nerve innervates hair cells of the PLL and projects to an octavolateralis column in the hindbrain that consists of the medial octavolateralis nucleus (MON), the caudal octavolateralis nucleus, and the magnocellular nucleus.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve development","termid":"GO:0048892"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve development","secondary_identifiers":["GO:0021733"],"synonyms":[{"name":"PLLN development","type":"exact"},{"name":"caudal lateral line nerve development","type":"exact"}],"termid":"GO:0048918"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05060","PANTHER:PTHR12642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: GO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming a pro-T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell lineage commitment","synonyms":[{"name":"pro-T cell fate commitment","type":"exact"},{"name":"pro-T lymphocyte fate commitment","type":"exact"},{"name":"pro-T lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002680"}


id: GO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA1-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071091"}


id: PBO:0040752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B1","termid":"PBO:0040752"}


id: SO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_escaping","synonyms":[{"name":"splice donor variant-NMD escaping","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002326"}


id: PBO:0027373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_transferase_activity","termid":"PBO:0027373"}


id: GO:0010967
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107178],"is_not":false,"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010967","terms_by_termid":{"GO:0010967":null}}


id: PBO:0055602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3040","termid":"PBO:0055602"}


id: GO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-CoA = acryloyl-CoA + NH3.","definition_xrefs":["EC:4.3.1.6","MetaCyc:BETA-ALANYL-COA-AMMONIA-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"beta-alanyl-CoA ammonia-lyase activity","secondary_identifiers":["RHEA:12416"],"synonyms":[{"name":"b-alanyl-CoA ammonia-lyase activity","type":"exact"},{"name":"beta-alanyl coenzyme A ammonia-lyase activity","type":"related"},{"name":"beta-alanyl-CoA ammonia-lyase (acryloyl-CoA-forming)","type":"related"}],"termid":"GO:0047698"}


id: GO:0120311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the conversion of an immature and partially assembled ciliary pro-basal body into a mature basal body that is capable of nucleating a cilium.","definition_xrefs":["GOC:krc","GOC:ach","PMID:26862392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"ciliary basal body organization","termid":"GO:0032053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"ciliary pro-basal body maturation","synonyms":[{"name":"flagellar pro-basal body maturation","type":"related"},{"name":"flagellar probasal body maturation","type":"related"},{"name":"pro-basal body maturation","type":"related"}],"termid":"GO:0120311"}


id: MOD:00649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylated residue","synonyms":[{"name":"AcylRes","type":"exact"}],"termid":"MOD:00649"}


id: PBO:0017826
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Chromosome Segregation in meiosis","termid":"PBO:0017826"}


id: PBO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1 (predicted)","termid":"PBO:0017943"}


id: _global:existence_overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","secondary_identifiers":["RO:0002490"],"termid":"_global:existence_overlaps"}


id: PBO:0082400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the CAAX farnesyltransferase (FTase); this complex prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit","termid":"PBO:0082400"}


id: FYPO:0005541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the frequency of DNA recombination is normal (i.e. indistinguishable from wild type) in subtelomeric regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA recombination frequency at subtelomeric heterochromatin","synonyms":[{"name":"normal DNA recombination frequency at subtelomere","type":"exact"},{"name":"normal DNA recombination frequency at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal DNA recombination frequency at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0005541"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: PBO:0081021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1C","termid":"PBO:0081021"}


id: GO:0019701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-arginine on the internal nitrogen-5 (N5) atom (also called delta-nitrogen) to form peptidyl-N5-methyl-L-arginine.","definition_xrefs":["RESID:AA0305","GOC:bf","PMID:9792625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-arginine N-methylation","termid":"GO:0035246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-arginine N5-methylation","synonyms":[{"name":"peptidyl-arginine delta-N-methylation","type":"exact"}],"termid":"GO:0019701"}


id: GO:0008222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor antigen (obsolete GO:0008222)","synonyms":[{"name":"tumor antigen","type":"exact"}],"termid":"GO:0008222"}


id: PATO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000859 pinna reflex value (obsolete PATO:0000859)","termid":"PATO:0000859"}


id: GO:0085016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Exit from dormant state, also known as resuscitation, of the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy exit of symbiont in host","synonyms":[{"name":"resuscitation of symbiont","type":"exact"}],"termid":"GO:0085016"}


id: PBO:0003749
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.50","termid":"PBO:0003749"}


id: PBO:0063451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 9A","termid":"PBO:0063451"}


id: GO:0001073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to DNA, typically within region of the promoter and transcribed region, to promote readthrough of a transcription termination site and thus extending the length of the RNA transcript produced. Examples of antitermination factors which bind DNA include the lambda Q protein.","definition_xrefs":["GOC:txnOH","PMID:8332211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"transcription antitermination factor activity, DNA binding","synonyms":[{"name":"DNA binding transcription antitermination factor activity","type":"exact"}],"termid":"GO:0001073"}


id: GO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic ribosomal RNA (obsolete GO:0005567)","synonyms":[{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"GO:0005567"}


id: GO:0009256
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108416,104344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"10-formyltetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF metabolic process","type":"exact"},{"name":"10-formyl-THF metabolism","type":"exact"},{"name":"10-formyltetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0009256","terms_by_termid":{"GO:0009257":null}}


id: GO:1902502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a multivesicular body membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"HOPS complex","termid":"GO:0030897"},{"relation_name":"part_of","term_name":"multivesicular body membrane","termid":"GO:0032585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0031410","GO:0032991","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"multivesicular body HOPS complex","synonyms":[{"name":"multivesicular body membrane HOPS complex","type":"exact"}],"termid":"GO:1902502"}


id: GO:1990764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a myofibroblast.","definition_xrefs":["PMID:19239477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast contraction","synonyms":[{"name":"MF contraction","type":"exact"},{"name":"MFB contraction","type":"exact"}],"termid":"GO:1990764"}


id: GO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining a protein in an unfolded, soluble state.","definition_xrefs":["GOC:nc","GOC:bf","GOC:PARL","PMID:21636303","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein","termid":"GO:0036506"}


id: GO:0043954
data:
  {"annotated_genes":["SJAG_03812","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[93327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a cellular component in a stable functional or structural state.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03812":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular component maintenance","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0071956"],"synonyms":[{"name":"cellular component maintenance at cellular level","type":"exact"}],"termid":"GO:0043954","terms_by_termid":{"GO:0062195":null,"GO:0071788":null}}


id: PBO:0075261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 14","termid":"PBO:0075261"}


id: PBO:0028386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028386"}


id: GO:0006805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:cab2","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"part_of","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xenobiotic metabolic process","secondary_identifiers":["Wikipedia:Xenobiotic_metabolism","GO:0017144","Wikipedia:Drug_metabolism"],"synonyms":[{"name":"drug metabolic process","type":"related"},{"name":"drug metabolism","type":"related"},{"name":"xenobiotic metabolism","type":"exact"}],"termid":"GO:0006805"}


id: GO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions downstream of the MRN complex to promote DNA repair and the G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and is composed of SOSS-B (SOSS-B1/OBFC2B or SOSS-B2/OBFC2A), SOSS-A/INTS3 and SOSS-C/C9orf80.","definition_xrefs":["PMID:19683501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SOSS complex","termid":"GO:0070876"}


id: PBO:0052818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 84","termid":"PBO:0052818"}


id: PBO:0065898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB41, member RAS oncogene family","termid":"PBO:0065898"}


id: GO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amino acid:sodium symporter activity","secondary_identifiers":["GO:0005284","GO:0005285"],"synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"},{"name":"insulin-activated sodium/amino acid transporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid symporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid transporter activity","type":"narrow"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"sodium/amino acid transporter activity","type":"broad"},{"name":"sodium/excitatory amino acid cotransporter activity","type":"broad"},{"name":"sodium/excitatory amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"narrow"}],"termid":"GO:0005283"}


id: GO:0042343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole glucosinolates. Glucosinolates are sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan; indoles are biologically active substances based on 2,3-benzopyrrole, formed during the catabolism of tryptophan.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"indole glucosinolate metabolic process","synonyms":[{"name":"indole glucosinolate metabolism","type":"exact"}],"termid":"GO:0042343"}


id: PBO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 4","termid":"PBO:0047741"}


id: FYPO:0006730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which strand elongation during nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic DNA replication elongation","synonyms":[{"name":"abnormal DNA replication elongation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication elongation during vegetative growth","type":"exact"},{"name":"abnormal DNA replication strand elongation","type":"exact"},{"name":"abnormal DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"FYPO:0006730"}


id: PBO:0081585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 512B","termid":"PBO:0081585"}


id: GO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"prosthetic group catabolic process","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"prosthetic group breakdown","type":"exact"},{"name":"prosthetic group catabolism","type":"exact"},{"name":"prosthetic group degradation","type":"exact"}],"termid":"GO:0051190"}


id: GO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lithium ion","termid":"GO:0010226"}


id: PBO:0108540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 1B","termid":"PBO:0108540"}


id: GO:0015420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: vitamin B12(out) + ATP + H2O = ADP + an vitamin B12(in) + H+ + phosphate. Vitamin B12 is alkylcob(III)alamin.","definition_xrefs":["GOC:pz","RHEA:17873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type vitamin B12 transporter activity","secondary_identifiers":["Reactome:R-HSA-5683325","EC:7.6.2.8","GO:0102023","Reactome:R-HSA-9759206","Reactome:R-HSA-5223313","GO:0015235","MetaCyc:3.6.3.33-RXN","Reactome:R-HSA-3095901"],"synonyms":[{"name":"ATP-dependent cobalamin transmembrane transporter activity","type":"related"},{"name":"ATP-dependent vitamin B12 transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cobalamin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled vitamin B12 transmembrane transporter activity","type":"related"},{"name":"cobalamin ABC transporter","type":"exact"},{"name":"cobalamin porter activity","type":"broad"},{"name":"cobalamin transporter activity","type":"broad"},{"name":"cobalamin-transporting ATPase activity","type":"related"},{"name":"vitamin B12 ABC transporter activity","type":"exact"},{"name":"vitamin B12 porter activity","type":"broad"},{"name":"vitamin B12 transporter activity","type":"broad"},{"name":"vitamin B12-transporting ATPase activity","type":"broad"}],"termid":"GO:0015420"}


id: PBO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-3-phosphate synthase 1","termid":"PBO:0051882"}


id: _global:part_of_structure_that_is_capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","secondary_identifiers":["RO:0002329"],"termid":"_global:part_of_structure_that_is_capable_of"}


id: PBO:0062974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4 like","termid":"PBO:0062974"}


id: GO:0018594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tert-butanol + 1/2 O2 = 2-methyl-2-hydroxy-1-propanol.","definition_xrefs":["UM-BBD_reactionID:r0615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tert-butanol 2-monooxygenase activity","synonyms":[{"name":"tert-butyl alcohol 2-monooxygenase activity","type":"exact"}],"termid":"GO:0018594"}


id: GO:1903199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lyase activity","termid":"GO:0051350"},{"relation_name":"is_a","term_name":"regulation of L-dopa decarboxylase activity","termid":"GO:1903198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-dopa decarboxylase activity","synonyms":[{"name":"down regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"down regulation of DDC activity","type":"exact"},{"name":"down regulation of DOPA decarboxylase activity","type":"exact"},{"name":"down regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"down-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"down-regulation of DDC activity","type":"exact"},{"name":"down-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"down-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"downregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"downregulation of DDC activity","type":"exact"},{"name":"downregulation of DOPA decarboxylase activity","type":"exact"},{"name":"downregulation of L-dopa decarboxylase activity","type":"exact"},{"name":"inhibition of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"inhibition of DDC activity","type":"narrow"},{"name":"inhibition of DOPA decarboxylase activity","type":"narrow"},{"name":"inhibition of L-dopa decarboxylase activity","type":"narrow"},{"name":"negative regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"negative regulation of DDC activity","type":"exact"},{"name":"negative regulation of DOPA decarboxylase activity","type":"exact"}],"termid":"GO:1903199"}


id: PBO:0005839
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.99.8","termid":"PBO:0005839"}


id: PBO:0060568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 4","termid":"PBO:0060568"}


id: PBO:0083678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein of unknown function; contains a phox (PX) homology domain; binds to both phosphatidylinositol-3-phosphate (PtdIns(3)P) and proteins involved in ER-Golgi or vesicular transport","termid":"PBO:0083678"}


id: GO:0032216
data:
  {"annotated_genes":["SJAG_00068"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84996],"is_not":false,"summary":null,"term":"GO:0032216"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosaminyl-phosphatidylinositol + fatty acyl-CoA = glucosaminyl-acyl-phasphotidylinositol + CoA.","definition_xrefs":["PMID:29484956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00068":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"glucosaminyl-phosphatidylinositol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-inositol acyltransferase","type":"related"},{"name":"glucosaminyl-phosphotidylinositol O-acyltransferase activity","type":"exact"}],"termid":"GO:0032216","terms_by_termid":{"GO:0032216":null}}


id: PBO:0080846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 10","termid":"PBO:0080846"}


id: GO:0140250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse.","definition_xrefs":["PMID:23083742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}


id: PBO:0109372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6B","termid":"PBO:0109372"}


id: PBO:0039794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAP1 antisense RNA 1","termid":"PBO:0039794"}


id: PBO:0079505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 3","termid":"PBO:0079505"}


id: PBO:0086987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repressible vacuolar alkaline phosphatase; controls polyphosphate content; regulated by levels of Pi and by Pho4p, Pho9p, Pho80p, Pho81p and Pho85p; dephosphorylates phosphotyrosyl peptides; contributes to NAD+ metabolism by producing nicotinamide riboside from NMN","termid":"PBO:0086987"}


id: GO:0018548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pentaerythritol trinitrate + NADPH = NADP+ + nitrate + pentaerythritol dinitrate.","definition_xrefs":["PMID:29168057","PMID:31119061"],"gene_count":0,"genotype_count":0,"name":"obsolete pentaerythritol trinitrate reductase activity (obsolete GO:0018548)","termid":"GO:0018548"}


id: GO:0106350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 5 isopentenyl diphosphate = 5 diphosphate + all-trans-octaprenyl diphosphate.","definition_xrefs":["PMID:8037730","RHEA:27798","PMID:3519603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"octaprenyl pyrophosphate synthase activity","secondary_identifiers":["EC:2.5.1.90"],"termid":"GO:0106350"}


id: PBO:0070169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 83 pseudogene","termid":"PBO:0070169"}


id: PBO:0091460
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens MOGS","termid":"PBO:0091460"}


id: GO:1905006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial to mesenchymal transition involved in endocardial cushion formation.","definition_xrefs":["PMID:18718461","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"},{"relation_name":"is_a","term_name":"regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:1905005"},{"relation_name":"negatively_regulates","term_name":"epithelial to mesenchymal transition involved in endocardial cushion formation","termid":"GO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","synonyms":[{"name":"down regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"down-regulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"downregulation of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"exact"},{"name":"inhibition of epithelial to mesenchymal transition involved in endocardial cushion formation","type":"narrow"}],"termid":"GO:1905006"}


id: PBO:0058685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6813","termid":"PBO:0058685"}


id: PBO:0055778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 2, peroxisomal","termid":"PBO:0055778"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GOC:BHF","GO_REF:0000058","GOC:TermGenie","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: PATO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity that arises by virtue of whether the bearer exhibits the ability to perform a regular function(s).","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionality","termid":"PATO:0001509"}


id: PBO:0045076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 3","termid":"PBO:0045076"}


id: PBO:0071921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 6","termid":"PBO:0071921"}


id: GO:0035700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an astrocyte guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:BHF","PMID:12271471","CL:0000127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte cell migration","termid":"GO:0043615"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte chemotaxis","termid":"GO:0035700"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: PBO:0034118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-helper_property","termid":"PBO:0034118"}


id: PBO:0084553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; active during alcoholic fermentation; regulated by anaerobiosis, negatively regulated by oxygen; repressed by heme; identical to Pau14p","termid":"PBO:0084553"}


id: PR:P87316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp15 gene.","definition_xrefs":["UniProtKB:P87316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit epsilon, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.15c","synonyms":[{"name":"ATPase subunit epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp15","type":"exact"}],"termid":"PR:P87316"}


id: GO:0042432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole metabolic process","termid":"GO:0042431"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole biosynthetic process","synonyms":[{"name":"indole anabolism","type":"exact"},{"name":"indole biosynthesis","type":"exact"},{"name":"indole formation","type":"exact"},{"name":"indole synthesis","type":"exact"}],"termid":"GO:0042432"}


id: PBO:0072096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 27","termid":"PBO:0072096"}


id: PBO:0091002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated signalling scaffold, receptor of activated C kinase (RACK1) ortholog Cpc2","termid":"PBO:0091002"}


id: PBO:0030891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress_during_vegetative_growth","termid":"PBO:0030891"}


id: PBO:0111766
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family","termid":"PBO:0111766"}


id: GO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"}


id: GO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The decanoylation of peptidyl-serine to form peptidyl-O3-decanoyl-L-serine, typical of the protein ghrelin.","definition_xrefs":["GOC:jsg","PMID:12630926","RESID:AA0385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"protein decanoylation","termid":"GO:0051366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042158"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine decanoylation","termid":"GO:0051367"}


id: FYPO:0007115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abolished, and the protein is present in the cytoplasm instead, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm","termid":"FYPO:0004735"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortical node during mitotic interphase","termid":"FYPO:0007139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","synonyms":[{"name":"abolished protein localisation to medial cortical node, with protein mislocalised to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cortical medial dot, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytokinetic nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortical node, with protein mislocalized to cytoplasm, during interphase of mitotic cell cycle","type":"exact"},{"name":"abolished protein localization to medial cortical nodes, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein recruitment to medial cortical node, with protein mislocalized to cytoplasm during mitotic interphase","type":"related"},{"name":"protein localization to medial cortical node abolished, with protein mislocalized to cytoplasm during mitotic interphase","type":"exact"}],"termid":"FYPO:0007115"}


id: GO:0051132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature natural killer T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["PMID:9133426","PMID:12154375","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell activation","synonyms":[{"name":"NK T lymphocyte activation","type":"exact"},{"name":"NK T-cell activation","type":"exact"},{"name":"NK T-lymphocyte activation","type":"exact"},{"name":"NKT cell activation","type":"exact"},{"name":"NT cell activation","type":"exact"},{"name":"natural T cell activation","type":"exact"},{"name":"natural killer T cell activation","type":"exact"}],"termid":"GO:0051132"}


id: GO:0048684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an intact axon as a result of injury to an axon.","definition_xrefs":["GOC:lm","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of axon regeneration","termid":"GO:0048680"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of intact axon in response to injury","termid":"GO:0048683"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of intact axon in response to injury","synonyms":[{"name":"activation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"stimulation of collateral sprouting of intact axon in response to injury","type":"narrow"},{"name":"up regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"up-regulation of collateral sprouting of intact axon in response to injury","type":"exact"},{"name":"upregulation of collateral sprouting of intact axon in response to injury","type":"exact"}],"termid":"GO:0048684"}


id: PATO:0002385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being marked by narrow lines, usually parallel, with at least one salient angle on the margin","definition_xrefs":["FNA:FNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated","termid":"PATO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striate-angular","termid":"PATO:0002385"}


id: PR:P37818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An arginase-2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase Car1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP26C9.02c","secondary_identifiers":["UniProtKB:P37818"],"synonyms":[{"name":"SPBP26C9.02c","type":"related"},{"name":"Spom972h-ARG2","type":"exact"}],"termid":"PR:P37818"}


id: PBO:0029388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleoplasm","termid":"PBO:0029388"}


id: GO:1990587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB, FtsL and FtsQ.","definition_xrefs":["PMID:21784946","GOC:bhm","PMID:15165235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"divisome complex","termid":"GO:1990586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FtsQBL complex","synonyms":[{"name":"FtsB-FtsL-FtsQ complex","type":"exact"}],"termid":"GO:1990587"}


id: GO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During conjugation without cellular fusion, the process that results in pairing complementary mating types. Localized morphological, cytological, and cytoskeletal changes connect the mating types without cytoplasmic mixing.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"},{"relation_name":"part_of","term_name":"conjugation with mutual genetic exchange","termid":"GO:0000748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"conjugant formation","termid":"GO:0000761"}


id: PBO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member C2, pseudogene","termid":"PBO:0046979"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: PBO:0046067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 2","termid":"PBO:0046067"}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: PBO:0004224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.6.1.1","termid":"PBO:0004224"}


id: PBO:0083519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C","termid":"PBO:0083519"}


id: PBO:0054891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2305","termid":"PBO:0054891"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","PMID:12626695","GOC:dgh","GOC:cls"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: PBO:0083206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YJL065C/DLS1","termid":"PBO:0083206"}


id: FYPO:0005621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains more adducts formed between a topoisomerase and DNA than normal.","definition_xrefs":["PMID:22730331","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased topoisomerase-DNA adduct level","synonyms":[{"name":"increased Top1-DNA adduct level","type":"narrow"},{"name":"increased Top1cc level","type":"narrow"},{"name":"increased topoisomerase I-DNA adduct level","type":"narrow"},{"name":"increased topoisomerase-DNA adduct level during mitotic cell cycle","type":"related"},{"name":"increased topoisomerase-DNA adduct level during vegetative growth","type":"exact"}],"termid":"FYPO:0005621"}


id: PBO:0091103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER exit protein","termid":"PBO:0091103"}


id: FYECO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiment was performed in the presence of mating pheromone.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000027 presence of mating pheromone (obsolete FYECO:0000027)","termid":"FYECO:0000027"}


id: GO:0009127
data:
  {"annotated_genes":["SJAG_01814","SJAG_04634","SJAG_01070","SJAG_03140","SJAG_01081","SJAG_01859","SJAG_01298","SJAG_04123","SJAG_00044","SJAG_02850","SJAG_04681","SJAG_00964","SJAG_06634","SJAG_02364","SJAG_03355","SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99435,84948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[106247,99436,95592,110509,113358,114968,93842,106358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[112857,89578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[59003,97213,104271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[89799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[114969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006188"},{"annotations":[89801,97832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[89803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine nucleoside monophosphate anabolism","type":"exact"},{"name":"purine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine nucleoside monophosphate formation","type":"exact"},{"name":"purine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009127","terms_by_termid":{"GO:0006177":null,"GO:0006188":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: PBO:0064523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D","termid":"PBO:0064523"}


id: PBO:0076301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic Ras GTPase activating protein 1","termid":"PBO:0076301"}


id: GO:1904312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gold(3+) stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16206274","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to gold(3+)","termid":"GO:1904311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gold(3+)","termid":"GO:1904312"}


id: PBO:0067097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 135, pseudogene","termid":"PBO:0067097"}


id: GO:0034732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor TFIIIB-beta complex that contains the TATA-binding protein (TBP), B'' and a specialized homolog of the conserved subunit BRF referred to as BRFU or TFIIIB50, which found in human but not conserved in yeast; the complex is involved in the regulation of transcription from type 3 (upstream) RNA polymerase III promoters.","definition_xrefs":["PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIIB complex","termid":"GO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIIIB-alpha complex","termid":"GO:0034732"}


id: PBO:0034524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_bundle_during_G0_to_G1_transition","termid":"PBO:0034524"}


id: GO:0061640
data:
  {"annotated_genes":["SJAG_05179","SJAG_02831","SJAG_04781","SJAG_00279","SJAG_04375","SJAG_00268","SJAG_03123","SJAG_04690","SJAG_03596","SJAG_03374","SJAG_02431","SJAG_03342","SJAG_02916","SJAG_04982","SJAG_04943","SJAG_02222","SJAG_03887","SJAG_02700","SJAG_01464","SJAG_05290","SJAG_04621","SJAG_00228","SJAG_00845","SJAG_01863","SJAG_01453","SJAG_04776","SJAG_01769","SJAG_04597","SJAG_01215","SJAG_00442","SJAG_01143","SJAG_01837","SJAG_03264","SJAG_04358","SJAG_00514","SJAG_03025","SJAG_01665","SJAG_01456","SJAG_03045","SJAG_02392","SJAG_03376","SJAG_01889","SJAG_05285","SJAG_03692","SJAG_04412","SJAG_01732","SJAG_02807","SJAG_00938","SJAG_00807","SJAG_00663","SJAG_03915","SJAG_04703","SJAG_01114","SJAG_03011","SJAG_02215","SJAG_01386","SJAG_03564","SJAG_03631","SJAG_03309","SJAG_04551","SJAG_04077","SJAG_00082","SJAG_02838","SJAG_03703","SJAG_03048","SJAG_03936","SJAG_02592","SJAG_03088","SJAG_02232","SJAG_04930","SJAG_02380","SJAG_01277","SJAG_02657","SJAG_03581","SJAG_04468","SJAG_03688","SJAG_04887","SJAG_00256","SJAG_01188","SJAG_02864","SJAG_03704","SJAG_00700","SJAG_01894","SJAG_04470","SJAG_04498","SJAG_04001","SJAG_03379","SJAG_01805","SJAG_04666","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90554,102006,111972],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[106802],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[85393,94323,94068,104136],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[106803,101141],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[95788,87340],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[88582,98443,97285,114455,115144,94069,108309,94921,98581,88368,88628,93761,113046,114633,93685,107875,113876,84333,91331,93960],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[94070],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98444,108310,96724,96956,93686,91332,113877,84334,94071,94922],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[78651,114963,95311,108311,108770,93687,87341,96138,99272,91333,113878,93936,93961,94326,104138,99934,112191,96986,102198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000281"},{"annotations":[92364,106766,115337,104851,84348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[96957,95312,100662,103041,104612,109087,98656,102116,102100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[98387],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[99713],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[98388,88884,98165,103093,95690],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[98392],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90460,86060],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[90631,90461,106524,83612,109369],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[86061,89848],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903490"},{"annotations":[106768,99718,86826,115338,91896],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[85304,111469,101174,85935,102376,109370,103043,88461,113889,89849],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[88462,90464,83613],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[110388,102101],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[88369,114634,106804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[90427,89855,115609],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[85881,105209,112697,86066,87888,113521,114684,99506,96967,109372,111470,83615,103141],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[83932,97406,107380],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[113890],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140279"},{"annotations":[111821],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule 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id: PBO:0086562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR103C is not an essential gene","termid":"PBO:0086562"}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an oxysterol + NADPH + O2 = 7-alpha-hydroxylated oxysterol + NADP+ + H2O.","definition_xrefs":["PMID:10882791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192065","Reactome:R-HSA-192178","Reactome:R-HSA-5602885","Reactome:R-HSA-191972"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: PBO:0012545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lsh1 (predicted)","termid":"PBO:0012545"}


id: GO:0043676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer of sexine which forms a roof over the columella, granules or other infratectal elements.","definition_xrefs":["PMID:33706055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tectum","synonyms":[{"name":"sexine 2","type":"exact"}],"termid":"GO:0043676"}


id: GO:2001224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"positively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron migration","synonyms":[{"name":"positive regulation of neuron chemotaxis","type":"exact"},{"name":"positive regulation of neuron guidance","type":"related"},{"name":"positive regulation of neuronal migration","type":"exact"}],"termid":"GO:2001224"}


id: GO:0009072
data:
  {"annotated_genes":["SJAG_03312","SJAG_01346","SJAG_01137","SJAG_03775","SJAG_03055","SJAG_04652","SJAG_02734","SJAG_02400","SJAG_03580","SJAG_00224","SJAG_02505","SJAG_04747","SJAG_00248","SJAG_01455","SJAG_00493","SJAG_00518","SJAG_05007","SJAG_03743","SJAG_03485","SJAG_03124","SJAG_03167","SJAG_00592","SJAG_00337","SJAG_04842"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90639,87147,97276,110096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009073"},{"annotations":[94380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009074"},{"annotations":[84577,93301,93302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[100836,102934,106410,90794,103861,111019,93082,98324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[85902,104607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[100394,87619,110665,99513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[99514,87620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006568"},{"annotations":[85903,110809,94382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"},{"annotations":[102774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00248":null,"SJAG_00337":null,"SJAG_00493":null,"SJAG_00518":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02400":null,"SJAG_02505":null,"SJAG_02734":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_03743":null,"SJAG_03775":null,"SJAG_04652":null,"SJAG_04747":null,"SJAG_04842":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"aromatic amino acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aromatic amino acid family metabolic process","type":"exact"},{"name":"aromatic amino acid family metabolism","type":"exact"}],"termid":"GO:0009072","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0000949":null,"GO:0006568":null,"GO:0006571":null,"GO:0006572":null,"GO:0009073":null,"GO:0009074":null,"GO:0009094":null}}


id: PBO:0057840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3155b","termid":"PBO:0057840"}


id: GO:1990364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete response to aldehyde (obsolete GO:1990364)","synonyms":[{"name":"response to aldehyde","type":"exact"}],"termid":"GO:1990364"}


id: FYPO:0005641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which kinetochores become separated during the first meiotic nuclear division, and in which homologous chromosomes do not move towards the spindle poles at the same time during anaphase, but are eventually separated normally.","definition_xrefs":["PomBase:mah","PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging chromosomes during meiosis I","termid":"FYPO:0004393"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II","termid":"FYPO:0005633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","synonyms":[{"name":"abnormal chromosome segregation during first meiotic nuclear division with premature sister kinetochore separation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with precocious centromeric dissociation, lagging chromosomes, and normal chromosome separation","type":"exact"},{"name":"abnormal chromosome segregation during meiosis I with premature sister kinetochore separation, lagging chromosomes, and normal chromosome segregation","type":"related"},{"name":"abnormal chromosome segregation during meiosis I with split kinetochores, lagging chromosomes, and normal chromosome separation","type":"related"}],"termid":"FYPO:0005641"}


id: PBO:0085770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase with similarity to mammalian PDK1 and yeast Pkh1p/Phk2p; yeast Pkh1p and Pkh2p are two redundant upstream activators of Pkc1p; identified as a multicopy suppressor of a pkh1 pkh2 double mutant","termid":"PBO:0085770"}


id: GO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neurotensin, a neuropeptide active in the central and peripheral nervous system in mammals, and transmitting the signal from one side of the membrane to the other by a mechanism independent of coupling to G proteins.","definition_xrefs":["PMID:9756851","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotensin receptor activity, non-G protein-coupled","synonyms":[{"name":"neurotensin receptor activity, non G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, non-G-protein coupled","type":"exact"},{"name":"non G protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein-coupled neurotensin receptor activity","type":"exact"}],"termid":"GO:0030379"}


id: GO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses 4-amino-4-deoxychorismate synthase activity.","definition_xrefs":["PMID:2251281","PMID:7592344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"aminodeoxychorismate synthase complex","synonyms":[{"name":"4-amino-4-deoxychorismate synthase complex","type":"related"},{"name":"ADC synthase complex","type":"exact"},{"name":"p-aminobenzoate synthetase complex","type":"related"}],"termid":"GO:0009356"}


id: GO:0061073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ciliary body morphogenesis","termid":"GO:0061073"}


id: GO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit protein complex which, in Drosophila, is a heterohexamer of three subunits, alpha, beta and gamma. The complex is thought to store amino acids for synthesis of adult proteins.","definition_xrefs":["GOC:jl","PMID:6781759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"larval serum protein complex","termid":"GO:0005616"}


id: PBO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 1","termid":"PBO:0061931"}


id: PBO:0081196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger imprinted 2","termid":"PBO:0081196"}


id: GO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homodimeric receptor complex that consists of two TGF-beta receptor monomers.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor complex (obsolete GO:0070022)","synonyms":[{"name":"TGF-beta receptor complex","type":"broad"},{"name":"transforming growth factor beta receptor complex","type":"exact"}],"termid":"GO:0070022"}


id: FYPO:0002459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"viable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002458"],"synonyms":[{"name":"viable branched cell during vegetative growth","type":"exact"},{"name":"viable branched elongated vegetative cell","type":"exact"},{"name":"viable branched vegetative cell","type":"exact"},{"name":"viable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, septated cell","type":"exact"},{"name":"viable branched, long, septated cell","type":"exact"},{"name":"viable branched, septated cell","type":"exact"},{"name":"viable elongated branched cell","type":"exact"}],"termid":"FYPO:0002459"}


id: PBO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad1","termid":"PBO:0001876"}


id: GO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor.","definition_xrefs":["EC:2.7.11.15","MetaCyc:BETA-ADRENERGIC-RECEPTOR-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0016740","GO:0003674","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"beta-adrenergic receptor kinase activity","secondary_identifiers":["Reactome:R-HSA-8851797","RHEA:19429","Reactome:R-HSA-8866268"],"synonyms":[{"name":"ADRBK1","type":"related"},{"name":"ATP:beta-adrenergic-receptor phosphotransferase activity","type":"broad"},{"name":"BARK1","type":"related"},{"name":"GRK2","type":"related"},{"name":"GRK3","type":"related"},{"name":"STK15","type":"related"},{"name":"[b-adrenergic-receptor] kinase activity","type":"related"},{"name":"adrenergic receptor kinase activity","type":"broad"},{"name":"beta-AR kinase activity","type":"related"},{"name":"beta-ARK","type":"related"},{"name":"beta-ARK 1","type":"related"},{"name":"beta-ARK 2","type":"related"},{"name":"beta-adrenergic receptor-specific kinase activity","type":"related"},{"name":"beta-adrenergic-receptor kinase (phosphorylating) activity","type":"related"},{"name":"beta-adrenergic-receptor kinase activity","type":"related"},{"name":"beta-adrenoceptor kinase 1 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase 2 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase activity","type":"related"},{"name":"beta-receptor kinase activity","type":"related"},{"name":"beta2ARK","type":"related"},{"name":"betaARK1","type":"related"}],"termid":"GO:0047696"}


id: PBO:0064923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 5 catalytic subunit","termid":"PBO:0064923"}


id: PBO:0045470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 2","termid":"PBO:0045470"}


id: PBO:0070987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 11","termid":"PBO:0070987"}


id: GO:0102975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: versiconol acetate + NADP = versiconal hemiacetal acetate + NADPH.","definition_xrefs":["GOC:pz","EC:1.1.1.353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"versiconal hemiacetal acetate reductase activity","secondary_identifiers":["RHEA:35695","MetaCyc:RXN-9490"],"termid":"GO:0102975"}


id: PBO:0031665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_modification","termid":"PBO:0031665"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:expert_pt","GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle remodeling","synonyms":[{"name":"LDL remodeling","type":"exact"},{"name":"LDL remodelling","type":"exact"},{"name":"low-density lipoprotein particle remodelling","type":"exact"},{"name":"small dense LDL formation","type":"related"},{"name":"small dense low-density lipoprotein particle formation","type":"related"}],"termid":"GO:0034374"}


id: FYPO:0001947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested in anaphase under conditions where arrest does not normally occur, and sister chromatids have not separated. The unseparated chromosomes remain condensed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids (obsolete FYPO:0001947)","synonyms":[{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated sister chromatids, during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed chromosomes","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic anaphase, with unseparated, condensed sister chromatids","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in anaphase, with unseparated sister chromatids","type":"exact"},{"name":"absence of chromosome separation, abnormal mitotic anaphase arrest with condensed chromosomes","type":"exact"}],"termid":"FYPO:0001947"}


id: FYPO:0007808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of valproic acid than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to valproic acid","synonyms":[{"name":"resistance to valproic acid during mitotic cell cycle","type":"related"},{"name":"resistance to valproic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0007808"}


id: PBO:0085112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclease required for DNA single- and double-strand break repair; acts at a post-incision step in repair of breaks that result from interstrand cross-links produced by a variety of mono- and bi-functional psoralen derivatives; induced by UV-irradiation; forms nuclear foci upon DNA replication stress","termid":"PBO:0085112"}


id: PBO:0025510
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosemia","termid":"PBO:0025510"}


id: PBO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_3'-5'-exoribonuclease_activity","termid":"PBO:0030177"}


id: PBO:0084682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial C1-tetrahydrofolate synthase; involved in interconversion between different oxidation states of tetrahydrofolate (THF); provides activities of formyl-THF synthetase, methenyl-THF cyclohydrolase, and methylene-THF dehydrogenase","termid":"PBO:0084682"}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_03221","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103665,106300],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0044085","GO:0006281","GO:0007049","GO:0065003","GO:0140013"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: GO:0031514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium which may have a variable arrangement of axonemal microtubules and also contains molecular motors. It may beat with a whip-like pattern that promotes cell motility or transport of fluids and other cells across a cell surface, such as on epithelial cells that line the lumenal ducts of various tissues; or they may display a distinct twirling motion that directs fluid flow asymmetrically across the cellular surface to affect asymmetric body plan organization. Motile cilia can be found in single as well as multiple copies per cell.","definition_xrefs":["GOC:dgh","PMID:17009929","PMID:20144998","PMID:22118931","GOC:kmv","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"motile cilium","secondary_identifiers":["GO:0031512","GO:0009434"],"synonyms":[{"name":"microtubule-based flagellum","type":"related"},{"name":"motile cilia","type":"exact"},{"name":"motile primary cilia","type":"related"},{"name":"motile primary cilium","type":"related"},{"name":"motile secondary cilium","type":"related"},{"name":"nodal cilium","type":"related"}],"termid":"GO:0031514"}


id: GO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in).","definition_xrefs":["TC:2.A.31.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"monoatomic cation:bicarbonate symporter activity","termid":"GO:0140410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:bicarbonate symporter activity","secondary_identifiers":["Reactome:R-HSA-425483","Reactome:R-HSA-5656219","Reactome:R-HSA-8878664","RHEA:70267"],"synonyms":[{"name":"sodium/bicarbonate cotransporter activity","type":"broad"},{"name":"sodium:bicarbonate cotransporter activity","type":"broad"},{"name":"sodium:hydrogencarbonate symporter activity","type":"exact"}],"termid":"GO:0008510"}


id: PBO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.13.-","termid":"PBO:0004706"}


id: PBO:0079313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6B","termid":"PBO:0079313"}


id: PBO:0078030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 20","termid":"PBO:0078030"}


id: GO:0007433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination in a larval organism of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["GOC:tb","PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland boundary specification","termid":"GO:0007432"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland boundary specification","synonyms":[{"name":"larval salivary gland determination","type":"broad"}],"termid":"GO:0007433"}


id: PBO:0051221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-40 (pseudogene)","termid":"PBO:0051221"}


id: GO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"follicle-stimulating hormone secretion","synonyms":[{"name":"FSH secretion","type":"exact"},{"name":"follicle stimulating hormone secretion","type":"exact"},{"name":"follitropin secretion","type":"exact"}],"termid":"GO:0046884"}


id: PBO:0086556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YHL005C is not an essential gene","termid":"PBO:0086556"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: PBO:0048069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 20","termid":"PBO:0048069"}


id: PBO:0066011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY RNA binding protein like","termid":"PBO:0066011"}


id: MOD:01242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-glutamic acid 5-methyl ester.","definition_xrefs":["PubMed:1326520","OMSSA:20","Unimod:298#E"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-glutamic acid 5-methyl ester (Glu)","termid":"MOD:00081"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-glutamic acid 5-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyle","type":"exact"}],"termid":"MOD:01242"}


id: PBO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 neighbor","termid":"PBO:0047725"}


id: PBO:0088214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type","termid":"PBO:0088214"}


id: PBO:0040537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-galactosyltransferase 4","termid":"PBO:0040537"}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: GO:1990535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a neuron projection in a stable functional or structural state. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:kmv","PMID:25359212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection maintenance","synonyms":[{"name":"axon homeostasis","type":"related"},{"name":"axon maintenance","type":"related"},{"name":"neurite maintenance","type":"narrow"},{"name":"neuron process maintenance","type":"exact"},{"name":"neuron protrusion maintenance","type":"exact"},{"name":"neuronal cell projection maintenance","type":"exact"}],"termid":"GO:1990535"}


id: GO:0051205
data:
  {"annotated_genes":["SJAG_01240","SJAG_01940","SJAG_04684","SJAG_01178","SJAG_00603","SJAG_03633","SJAG_00959","SJAG_02914","SJAG_01223","SJAG_04294","SJAG_05300","SJAG_01782","SJAG_03315","SJAG_00064","SJAG_02437","SJAG_03865","SJAG_01999","SJAG_05302","SJAG_05414","SJAG_02208","SJAG_01405","SJAG_00277","SJAG_01127","SJAG_02330","SJAG_02065","SJAG_03930","SJAG_01917"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87292,109850,104310,100783,90875,94623,97211,105335,108256,94399,110394,111097,94090,87711,99527,106398,104396,102165,100486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[109356,96939,95031,84870,110699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[84023,107005,110132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in the incorporation of a protein into a biological membrane. Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"part_of","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01405":null,"SJAG_01782":null,"SJAG_01917":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03633":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05300":null,"SJAG_05302":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral membrane protein localization","type":"exact"},{"name":"integral membrane protein positioning","type":"exact"},{"name":"membrane protein localization","type":"exact"},{"name":"membrane protein positioning","type":"exact"},{"name":"protein-membrane insertion","type":"exact"}],"termid":"GO:0051205","terms_by_termid":{"GO:0032979":null,"GO:0045048":null,"GO:0051204":null,"GO:0071816":null}}


id: PBO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 2","termid":"PBO:0061669"}


id: GO:1904533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:nc","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:22579284","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"regulation of telomeric loop disassembly","synonyms":[{"name":"regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904533"}


id: PBO:0039243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A3","termid":"PBO:0039243"}


id: PATO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the back or upper surface of an organism.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised dorsally","termid":"PATO:0001919"}


id: PBO:0065054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 8","termid":"PBO:0065054"}


id: PBO:0041586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 1","termid":"PBO:0041586"}


id: SO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant whereby a region of a chromosome has been transferred to another position. Among interchromosomal rearrangements, the term transposition is reserved for that class in which the telomeres of the chromosomes involved are coupled (that is to say, form the two ends of a single DNA molecule) as in wild-type.","definition_xrefs":["FB:reference_manual","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_transposition","synonyms":[{"name":"chromosomal transposition","type":"exact"},{"name":"transposition","type":"narrow"}],"termid":"SO:0000453"}


id: PBO:0040141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 4","termid":"PBO:0040141"}


id: GO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"positively_regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte activation","synonyms":[{"name":"activation of lymphocyte activation","type":"narrow"},{"name":"stimulation of lymphocyte activation","type":"narrow"},{"name":"up regulation of lymphocyte activation","type":"exact"},{"name":"up-regulation of lymphocyte activation","type":"exact"},{"name":"upregulation of lymphocyte activation","type":"exact"}],"termid":"GO:0051251"}


id: PBO:0055744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1B divergent transcript","termid":"PBO:0055744"}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PBO:0076388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 1","termid":"PBO:0076388"}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PBO:0046520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroblast membrane associated protein (Scianna blood group)","termid":"PBO:0046520"}


id: GO:0098852
data:
  {"annotated_genes":["SJAG_01112","SJAG_00771","SJAG_01236","SJAG_03909","SJAG_02433","SJAG_01817","SJAG_05294","SJAG_02656","SJAG_01571","SJAG_04616","SJAG_01795","SJAG_07012","SJAG_02289","SJAG_04966","SJAG_03848","SJAG_04867","SJAG_03400","SJAG_03511","SJAG_02356","SJAG_02315","SJAG_04471","SJAG_03406","SJAG_00209","SJAG_03928","SJAG_00824","SJAG_03138","SJAG_01036","SJAG_04232","SJAG_03895","SJAG_00534","SJAG_01619","SJAG_00212","SJAG_00051","SJAG_02665","SJAG_01783","SJAG_03100","SJAG_05210","SJAG_01299","SJAG_04015","SJAG_03137","SJAG_01505","SJAG_04963","SJAG_00821","SJAG_03450","SJAG_03072","SJAG_03497","SJAG_01509","SJAG_04698","SJAG_02414","SJAG_04955","SJAG_01990","SJAG_01991","SJAG_03656","SJAG_01319","SJAG_00732","SJAG_02603","SJAG_01400","SJAG_02029","SJAG_00638","SJAG_02117","SJAG_02782","SJAG_03403","SJAG_01320","SJAG_03725","SJAG_03371","SJAG_01803","SJAG_00516","SJAG_04506","SJAG_04725","SJAG_02565","SJAG_01913","SJAG_00688","SJAG_00877","SJAG_03987","SJAG_01080","SJAG_02853","SJAG_01027","SJAG_01324","SJAG_03667","SJAG_00457","SJAG_03442","SJAG_02578","SJAG_04502","SJAG_02902","SJAG_03960","SJAG_00299","SJAG_04643","SJAG_03447","SJAG_00570","SJAG_02699","SJAG_00029","SJAG_03250","SJAG_01471","SJAG_03256","SJAG_05184","SJAG_03009","SJAG_01344","SJAG_02716","SJAG_03313","SJAG_01941","SJAG_02103","SJAG_01032","SJAG_04975","SJAG_03899","SJAG_02023","SJAG_01145","SJAG_01078","SJAG_03089","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114189,112910,99921,87542,107790,90670,92734,110876,85909,86452,91697,105371,97988,86277,85134,85168,94629,94725,85155,96250,83808,96303,89015,89570,91937,99809,99599,105421,106020,108570,109241,109651,94883,110514,89811,90103,97646,92024,97463,101122,92651,110337,112564,113542,114353,88934,85215,85377,86218,99447,102666,99845,100891,105868,109422,106389,109562,113384,84110,113603,85202,88158,89752,90362,103191,94584,106254,106259,111559,103395,113806,93655,94843,96033,89810,103289,96273,95996,105986,112206,90077,88094,106346,103847,114715,113033,90641,93091,92453,101705,94388,102673,104277,92178,105256,112637,91809,94081,98814,100962,110344,104677,89939,92068,93397,95958,105283,84092,113258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lytic vacuole and separating its contents from the cytoplasm of the cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar membrane","termid":"GO:0005774"},{"relation_name":"part_of","term_name":"lytic 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id: PR:Q10316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arc5 gene.","definition_xrefs":["UniProtKB:Q10316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2/3 complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.04c","synonyms":[{"name":"Spom972h-arc5","type":"exact"},{"name":"arp2/3 complex 16 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p16-ARC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10316"}


id: FYPO:0007338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 methylation at centromere during vegetative growth","termid":"FYPO:0007337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K4 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3-K4 trimethylation at centromere during mitotic cell cycle during vegetative growth","type":"related"},{"name":"increased histone H3-K4 trimethylation at centromeric region","type":"exact"},{"name":"increased histone H3K4 trimethylation at centromere","type":"exact"},{"name":"increased histone H3K4me3 at centromere","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at centromere","type":"exact"}],"termid":"FYPO:0007338"}


id: PBO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 54","termid":"PBO:0071213"}


id: GO:0052194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an organism or motile cell on or near its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete movement on or near symbiont (obsolete GO:0052194)","termid":"GO:0052194"}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: PBO:0001835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein Pac2","termid":"PBO:0001835"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: PBO:0066472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and FYVE like domain containing E3 ubiquitin protein ligase","termid":"PBO:0066472"}


id: GO:1905443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:TermGenie","PMID:15533940","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of clathrin coat assembly","synonyms":[{"name":"regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905443"}


id: PR:O74467
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set5 gene.","definition_xrefs":["UniProtKB:O74467","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.05","synonyms":[{"name":"Spom972h-set5","type":"exact"}],"termid":"PR:O74467"}


id: PBO:0042308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 2","termid":"PBO:0042308"}


id: PBO:0079427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 10","termid":"PBO:0079427"}


id: SO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:011"],"synonyms":[{"name":"N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-threonylcarbamoyladenosine","type":"exact"},{"name":"t6A","type":"exact"}],"termid":"SO:0001305"}


id: GO:0010530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition (obsolete GO:0010530)","termid":"GO:0010530"}


id: GO:1902686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of a programmed cell death process.","definition_xrefs":["PMID:20151314","GO_REF:0000060","GOC:mtg_apoptosis","GOC:pg","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability","termid":"GO:0035794"},{"relation_name":"part_of","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization involved in programmed cell death","synonyms":[{"name":"MPT involved in PCD","type":"narrow"},{"name":"MPT involved in caspase-independent apoptosis","type":"related"},{"name":"MPT involved in caspase-independent cell death","type":"narrow"},{"name":"MPT involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"MPT involved in programmed cell death","type":"narrow"},{"name":"MPT involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrial membrane permeabilization involved in PCD","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial membrane permeabilization involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in programmed cell death","type":"narrow"},{"name":"mitochondrial membrane permeabilization involved in regulated cell death","type":"related"},{"name":"mitochondrial outer membrane permeabilization during programmed cell death","type":"exact"},{"name":"mitochondrial permeability transition involved in PCD","type":"narrow"},{"name":"mitochondrial permeability transition involved in caspase-independent apoptosis","type":"related"},{"name":"mitochondrial permeability transition involved in caspase-independent cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in programmed cell death","type":"narrow"},{"name":"mitochondrial permeability transition involved in regulated cell death","type":"related"},{"name":"mitochondrion outer membrane permeabilization involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in PCD","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of mitochondrial membrane permeability involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of mitochondrial membrane permeability involved in programmed cell death","type":"exact"},{"name":"positive regulation of mitochondrial membrane permeability involved in regulated cell death","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in PCD","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent apoptosis","type":"related"},{"name":"positive regulation of transport across mitochondrial membrane involved in caspase-independent cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in non-apoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in nonapoptotic programmed cell death","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane involved in programmed cell death","type":"exact"},{"name":"positive regulation of transport across mitochondrial membrane involved in regulated cell death","type":"related"}],"termid":"GO:1902686"}


id: PBO:0058466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5195","termid":"PBO:0058466"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: PBO:0068852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 90, pseudogene","termid":"PBO:0068852"}


id: PR:O74386
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C3H7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.11","secondary_identifiers":["UniProtKB:O74386"],"synonyms":[{"name":"Spom972h-METTL6","type":"exact"}],"termid":"PR:O74386"}


id: PR:P30821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavoprotein wrbA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P25 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.14c","secondary_identifiers":["UniProtKB:P30821"],"synonyms":[{"name":"Spom972h-wrbA","type":"exact"},{"name":"brefeldin A resistance protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30821"}


id: PBO:0069111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 360, pseudogene","termid":"PBO:0069111"}


id: GO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An N-terminal peptidyl-proline dimethylation process that contributes to translation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-proline dimethylation","termid":"GO:0018016"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-proline dimethylation involved in translation","termid":"GO:0071891"}


id: GO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-[(R)-3-hydroxybutanoyloxy]butanoate + H2O = 2 (R)-3-hydroxybutanoate + H+.","definition_xrefs":["EC:3.1.1.22","RHEA:10172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydroxybutyrate-dimer hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00048","MetaCyc:HYDROXYBUTYRATE-DIMER-HYDROLASE-RXN"],"synonyms":[{"name":"(R)-3-((R)-3-hydroxybutanoyloxy)butanoate hydroxybutanoylhydrolase activity","type":"related"},{"name":"D-(-)-3-hydroxybutyrate-dimer hydrolase activity","type":"related"}],"termid":"GO:0047989"}


id: PR:000027513
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prz1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:12637524","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulator prz1","pombase_gene_id":"SPAC4G8.13c","synonyms":[{"name":"Pbp1-responsive zinc finger protein 1","type":"exact"},{"name":"prz1","type":"exact"}],"termid":"PR:000027513"}


id: SO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a transcript that will be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_region","synonyms":[{"name":"pre edited region","type":"exact"},{"name":"pre-edited region","type":"exact"}],"termid":"SO:0000583"}


id: SO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable_element that is engineered and foreign.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"foreign_transposable_element","termid":"SO:0000720"},{"relation_name":"is_a","term_name":"engineered_transposable_element","termid":"SO:0000798"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_transposable_element","synonyms":[{"name":"engineered foreign transposable element","type":"exact"}],"termid":"SO:0000799"}


id: GO:1905566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GO_REF:0000058","PMID:22848640","GOC:nc","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905566)","synonyms":[{"name":"down regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"down regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"down regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"down-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"down-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"down-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"downregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"downregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"downregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"inhibition of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"inhibition of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"inhibition of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"negative regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"negative regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"}],"termid":"GO:1905566"}


id: GO:1903340
data:
  {"annotated_genes":["SJAG_01181","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98168,106983],"is_not":false,"summary":null,"term":"GO:1903340"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"positively_regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01181":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell wall organisation or biogenesis","type":"narrow"},{"name":"activation of cell wall organization or biogenesis","type":"narrow"},{"name":"activation of cell wall organization or biogenesis at cellular level","type":"narrow"},{"name":"activation of cellular cell wall organisation or biogenesis","type":"narrow"},{"name":"activation of cellular cell wall organization or biogenesis","type":"narrow"},{"name":"positive regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"positive regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"positive regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"positive regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"up regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"up regulation of cell wall organization or biogenesis","type":"exact"},{"name":"up regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"up regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"up regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"up-regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"up-regulation of cell wall organization or biogenesis","type":"exact"},{"name":"up-regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"up-regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"up-regulation of cellular cell wall organization or biogenesis","type":"exact"},{"name":"upregulation of cell wall organisation or biogenesis","type":"exact"},{"name":"upregulation of cell wall organization or biogenesis","type":"exact"},{"name":"upregulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"upregulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"upregulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903340","terms_by_termid":{"GO:1903340":null}}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["PMID:15066286","GOC:bf","PMID:1116643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: PBO:0075754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked","termid":"PBO:0075754"}


id: GO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.","definition_xrefs":["ISBN:0120781859","GOC:add","GOC:jl","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class II protein complex","termid":"GO:0042613"}


id: GO:0006108
data:
  {"annotated_genes":["SJAG_01753","SJAG_04843","SJAG_02176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61435,111743,114498],"is_not":false,"summary":null,"term":"GO:0006108"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01753":null,"SJAG_02176":null,"SJAG_04843":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"malate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"malate metabolism","type":"exact"}],"termid":"GO:0006108","terms_by_termid":{"GO:0006108":null}}


id: GO:0098021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Component of the virus capsid (head), located on the outer head surface. Involved in the stabilization of the head structure and usually non-essential.","definition_xrefs":["VZ:4398","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid, decoration","synonyms":[{"name":"decoration protein","type":"related"}],"termid":"GO:0098021"}


id: GO:2000288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"positively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast proliferation","termid":"GO:2000288"}


id: PBO:0088484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase, RRM-containing Rct1","termid":"PBO:0088484"}


id: GO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Peyer's patch is generated and organized. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"Peyer's patch development","termid":"GO:0048541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch morphogenesis","termid":"GO:0061146"}


id: GO:0022605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process that is a step in the formation and maturation of an ovum or female gamete from a primordial female germ cell.","definition_xrefs":["GOC:mtg_sensu","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammalian oogenesis stage","synonyms":[{"name":"mammalian oogenesis process","type":"exact"}],"termid":"GO:0022605"}


id: PBO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg2","termid":"PBO:0090691"}


id: PBO:0063194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 7","termid":"PBO:0063194"}


id: GO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"tachykinin receptor signaling pathway","termid":"GO:0007217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating tachykinin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by tachykinin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by tachykinin receptor signalling pathway","type":"related"},{"name":"tachykinin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007209"}


id: PATO:0001348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the absence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F minus mating type","synonyms":[{"name":"F-","type":"exact"}],"termid":"PATO:0001348"}


id: PBO:0000823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein BiP","termid":"PBO:0000823"}


id: PBO:0076054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin","termid":"PBO:0076054"}


id: PBO:0064641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenoylcysteine synthetase","termid":"PBO:0064641"}


id: PBO:0029294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus","termid":"PBO:0029294"}


id: PBO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-functionally_related_to","termid":"PBO:0017467"}


id: PBO:0027337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027337"}


id: PR:P79009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2502 gene.","definition_xrefs":["UniProtKB:P79009","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.05c","synonyms":[{"name":"S31-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2502","type":"exact"}],"termid":"PR:P79009"}


id: GO:0061621
data:
  {"annotated_genes":["SJAG_03660","SJAG_00839","SJAG_02369","SJAG_02107","SJAG_02009","SJAG_00461","SJAG_06621","SJAG_00027","SJAG_00605","SJAG_01310","SJAG_03373","SJAG_04334","SJAG_02135","SJAG_04495","SJAG_03903","SJAG_06622","SJAG_02796","SJAG_02945","SJAG_03828","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90575,91060,94033,94303,99399,99655,100471,101453,101454,101455,101819,101820,104923,104924,104925,104926,104927,104928,104929,105387,105388,105389,105390,105391,105392,105393,112364],"is_not":false,"summary":null,"term":"GO:0061621"}]},"cv_name":"biological_process","definition":"The glycolytic process that begins with the conversion of glucose to glucose-6-phosphate by glucokinase activity. Glycolytic processes are the chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP.","definition_xrefs":["ISBN:0201090910","GOC:dph","ISBN:0879010479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH regeneration","termid":"GO:0006735"},{"relation_name":"is_a","term_name":"NAD catabolic process","termid":"GO:0019677"},{"relation_name":"is_a","term_name":"glycolytic process through glucose-6-phosphate","termid":"GO:0061620"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"canonical glycolysis","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycolysis","MetaCyc:ANAGLYCOLYSIS-PWY"],"termid":"GO:0061621","terms_by_termid":{"GO:0061621":null}}


id: PR:Q9UTC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly enzyme ISCU, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10093:SF0","PRO:DNx","OMA:SCHPO00204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.13c","secondary_identifiers":["UniProtKB:Q9UTC6"],"synonyms":[{"name":"Spom972h-ISCU","type":"exact"},{"name":"iron sulfur cluster scaffold protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTC6"}


id: GO:0018426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine. The polypeptide backbones of glycoproteins and mucin-like proteoglycans are extensively modified with a complex array of phosphoglycan chains that are linked to Ser/Thr-rich domains via a common Man-alpha1-phosphate-Ser linkage.","definition_xrefs":["RESID:AA0297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphate-linked glycosylation via serine","termid":"GO:0042077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthetic process","synonyms":[{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine anabolism","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine biosynthesis","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine formation","type":"exact"},{"name":"O3-(phosphoglycosyl-D-mannose-1-phosphoryl)-L-serine synthesis","type":"exact"}],"termid":"GO:0018426"}


id: GO:1900099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of plasma cell differentiation","termid":"GO:1900098"},{"relation_name":"negatively_regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma cell differentiation","synonyms":[{"name":"down regulation of plasma cell development","type":"related"},{"name":"down regulation of plasma cell differentiation","type":"exact"},{"name":"down-regulation of plasma cell development","type":"related"},{"name":"down-regulation of plasma cell differentiation","type":"exact"},{"name":"downregulation of plasma cell development","type":"related"},{"name":"downregulation of plasma cell differentiation","type":"exact"},{"name":"inhibition of plasma cell development","type":"related"},{"name":"inhibition of plasma cell differentiation","type":"narrow"},{"name":"negative regulation of plasma cell development","type":"related"}],"termid":"GO:1900099"}


id: GO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesol biosynthetic process","synonyms":[{"name":"farnesol anabolism","type":"exact"},{"name":"farnesol biosynthesis","type":"exact"},{"name":"farnesol formation","type":"exact"},{"name":"farnesol synthesis","type":"exact"}],"termid":"GO:0006715"}


id: GO:0031814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y4 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"P2Y4 nucleotide receptor binding","synonyms":[{"name":"P2Y4 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031814"}


id: PBO:0047694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR1 divergent transcript","termid":"PBO:0047694"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["PubMed:3769923","DeltaMass:0","PubMed:1547888","RESID:AA0182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: PBO:0061439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group E member 1","termid":"PBO:0061439"}


id: FYPO:0006089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}


id: PBO:0003240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon alpha subunit Sec61","termid":"PBO:0003240"}


id: GO:0001510
data:
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id: SO:0000791
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id: PBO:0078337
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id: PBO:0071677
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id: PBO:0074616
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id: PBO:0052210
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id: PBO:0003066
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id: PBO:0034810
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id: GO:0051943
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id: GO:0060656
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id: PBO:0051164
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id: GO:0005816
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id: GO:0009742
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id: GO:0004345
data:
  {"annotated_genes":["SJAG_02297","SJAG_02696","SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92935,93025,114441],"is_not":false,"summary":null,"term":"GO:0004345"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+.","definition_xrefs":["EC:1.1.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02148":null,"SJAG_02297":null,"SJAG_02696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose-6-phosphate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLU6PDEHYDROG-RXN","RHEA:15841","Reactome:R-HSA-70377"],"synonyms":[{"name":"6-phosphoglucose dehydrogenas","type":"related"},{"name":"6-phosphoglucose dehydrogenase activity","type":"exact"},{"name":"D-glucose 6-phosphate dehydrogenase activity","type":"exact"},{"name":"D-glucose-6-phosphate:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"Entner-doudoroff enzyme","type":"related"},{"name":"G6PD activity","type":"related"},{"name":"G6PDH","type":"exact"},{"name":"GDH","type":"related"},{"name":"NADP-dependent glucose 6-phosphate dehydrogenase activity","type":"exact"},{"name":"NADP-glucose-6-phosphate dehydrogenase activity","type":"exact"},{"name":"Zwischenferment","type":"related"},{"name":"glucose 6-phosphate dehydrogenase (NADP) activity","type":"exact"},{"name":"glucose-6-phosphate 1-dehydrogenase activity","type":"exact"}],"termid":"GO:0004345","terms_by_termid":{"GO:0004345":null}}


id: PBO:0111441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein","termid":"PBO:0111441"}


id: FYPO:0007205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork arrest at rDNA repeats","synonyms":[{"name":"normal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"normal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0007205"}


id: SOFP:dicistronic
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"true if transcript codes for >1 non-overlapping CDSs","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic","termid":"SOFP:dicistronic"}


id: PBO:0080505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL divergent transcript","termid":"PBO:0080505"}


id: PBO:0027902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_centromeric_outer_repeat_transcript-derived_siRNA_level","termid":"PBO:0027902"}


id: PBO:0074215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 1","termid":"PBO:0074215"}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["GOC:jh","GOC:dph","GOC:tb","PMID:19966303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: PBO:0003984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp43 (predicted)","termid":"PBO:0003984"}


id: PBO:0067575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 732, pseudogene","termid":"PBO:0067575"}


id: PBO:0068081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 387","termid":"PBO:0068081"}


id: PBO:0080663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 9","termid":"PBO:0080663"}


id: GO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a host cell nucleus, composed of lamin filaments.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nuclear inner membrane","termid":"GO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear lamina","termid":"GO:0044203"}


id: PBO:0078230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-5","termid":"PBO:0078230"}


id: PBO:0082486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carnitine acetyltransferase; has similarity to Yat1p, which is a carnitine acetyltransferase associated with the mitochondrial outer membrane","termid":"PBO:0082486"}


id: PBO:0076172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 3","termid":"PBO:0076172"}


id: PBO:0068103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 410","termid":"PBO:0068103"}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: PBO:0055233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2660","termid":"PBO:0055233"}


id: GO:2000233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"negative regulation of ribosome biogenesis","termid":"GO:0090071"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"negatively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"negative regulation of rRNA processing","synonyms":[{"name":"negative regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000233"}


id: FYPO:0001084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002946","FYPO:0005447"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level","synonyms":[{"name":"increased cell wall alpha-D-glucan level","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation","type":"related"},{"name":"increased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001084"}


id: PBO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.-","termid":"PBO:0001572"}


id: PBO:0088566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A catalytic subunit Ppa1/Ppa2","termid":"PBO:0088566"}


id: PBO:0005464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (predicted)","termid":"PBO:0005464"}


id: GO:0034952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonate semialdehyde + H+ = acetaldehyde + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete malonate semialdehyde decarboxylase activity (obsolete GO:0034952)","termid":"GO:0034952"}


id: PBO:0082650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Shu complex (aka PCSS complex); Shu complex also includes Psy3, Csm2, Shu1, and promotes error-free DNA repair, Shu complex mediates inhibition of Srs2p function; promotes formation of Rad51p filaments; important for both mitotic and meiotic homologous recombination, and contains a conserved SWIM domain that is necessary for both","termid":"PBO:0082650"}


id: PBO:0071139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 2","termid":"PBO:0071139"}


id: FYPO:0006313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which progression from meiotic G2 phase to M phase of meiosis I does not occur.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiotic G2/MI transition","synonyms":[{"name":"abolished G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"abolished entry into meiosis","type":"related"}],"termid":"FYPO:0006313"}


id: PBO:0044221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 2","termid":"PBO:0044221"}


id: PBO:0086819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR084W and adjacent ORF YMR085W are merged in related strains, and together are paralogous to glutamine-fructose-6-phosphate amidotransferase GFA1","termid":"PBO:0086819"}


id: PATO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000063 percentage (obsolete PATO:0000063)","termid":"PATO:0000063"}


id: GO:0052207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type III secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type III secretion system involved in symbiotic interaction (obsolete GO:0052207)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type III secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052207"}


id: GO:0044465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal, in a different organism.","definition_xrefs":["GOC:ed","PMID:18579526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"is_a","term_name":"regulation of sensory perception of pain","termid":"GO:0051930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of sensory perception of pain in another organism","synonyms":[{"name":"modulation of sensory perception of pain in other organism","type":"exact"},{"name":"regulation of sensory perception of pain in another organism","type":"exact"}],"termid":"GO:0044465"}


id: FYPO:0008150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from rDNA intergenic repeat regions is higher than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased non functional ncRNA level","termid":"FYPO:0008149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rDNA intergenic repeat RNA level","synonyms":[{"name":"increased transcript level at rDNA intergenic region","type":"exact"}],"termid":"FYPO:0008150"}


id: GO:0099067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endosome membrane (obsolete GO:0099067)","termid":"GO:0099067"}


id: PBO:0050131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 41","termid":"PBO:0050131"}


id: PBO:0076730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"treacle ribosome biogenesis factor 1","termid":"PBO:0076730"}


id: GO:0030197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions as a lubricant for an extracellular matrix, such as a mucous membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix constituent, lubricant activity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030197"}


id: PBO:0091846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific microprotein Smp2","termid":"PBO:0091846"}


id: PBO:0091174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BC10 family small membrane protein, unknown biological role, human BLCAP ortholog","termid":"PBO:0091174"}


id: PBO:0082120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis","termid":"PBO:0082120"}


id: PR:O94330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg6 gene.","definition_xrefs":["UniProtKB:O94330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid acetyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.14","synonyms":[{"name":"AGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-acetylglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NAGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg6","type":"exact"},{"name":"arginine-requiring protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate N-acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94330"}


id: PR:O00087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydrolipoyl dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoyl dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.09c","secondary_identifiers":["UniProtKB:O00087"],"synonyms":[{"name":"DLDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DLD","type":"exact"},{"name":"dihydrolipoamide dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00087"}


id: PBO:0030572
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_phenylalanine_level","termid":"PBO:0030572"}


id: GO:0045952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"juvenile hormone catabolic process","termid":"GO:0006719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of juvenile hormone catabolic process","synonyms":[{"name":"regulation of juvenile hormone breakdown","type":"exact"},{"name":"regulation of juvenile hormone catabolism","type":"exact"},{"name":"regulation of juvenile hormone degradation","type":"exact"}],"termid":"GO:0045952"}


id: PBO:0069793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1079, pseudogene","termid":"PBO:0069793"}


id: GO:0061129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061129"}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: GO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a glycosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane","termid":"GO:0005778"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycosome membrane","termid":"GO:0046860"}


id: PBO:0086294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in mitochondrial DNA recombinational repair; also involved in interstrand cross-link repair; binds to and catalyzes the annealing of single-stranded mtDNA; oligomerizes to form rings and filaments; related to Rad52-type recombination proteins, with limited overall similarity but sharing conserved functionally important residues; component of the mitochondrial nucleoid, required for the repair of oxidative mtDNA damage and mitochondrial genome maintenance","termid":"PBO:0086294"}


id: GO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transport","synonyms":[{"name":"glucosylglycerol transport","type":"broad"}],"termid":"GO:0051475"}


id: PBO:0064587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member G","termid":"PBO:0064587"}


id: GO:1990545
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99652],"is_not":false,"summary":null,"term":"GO:1990545"}]},"cv_name":"biological_process","definition":"The process in which thiamine pyrophosphate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:12411483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine pyrophosphate transmembrane transport","termid":"GO:0030974"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"mitochondrial thiamine pyrophosphate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990545","terms_by_termid":{"GO:1990545":null}}


id: PBO:0085195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ornithine transporter of the mitochondrial inner membrane; exports ornithine from mitochondria as part of arginine biosynthesis; functionally complemented by human ortholog, SLC25A15, which is associated with hyperammonaemia-hyperornithinaemia-homocitrullinuria (HHH) syndrome, but HHH-associated variants fail to complement","termid":"PBO:0085195"}


id: GO:0052896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + O2 + spermidine = 1,3-diaminopropane + 4-aminobutanal + H2O2.","definition_xrefs":["RHEA:25820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"spermidine oxidase (propane-1,3-diamine-forming) activity","secondary_identifiers":["EC:1.5.3.14","KEGG_REACTION:R01914","MetaCyc:RXN-10747"],"synonyms":[{"name":"polyamine oxidase (propane-1,3-diamine-forming) activity","type":"broad"},{"name":"spermidine:(acceptor) oxidoreductase activity","type":"broad"}],"termid":"GO:0052896"}


id: MOD:01649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine removal","termid":"MOD:01649"}


id: GO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the absence of centrosomes. Formation is initiated by the nucleation of microtubules (MTs) in the vicinity of condensed chromatin. MTs then attach to and congress around the chromatin due to activity of microtubule motors. A bipolar spindle is formed by focusing of the terminal ends of the MT array into spindle poles by molecular motors and cross-linking proteins.","definition_xrefs":["PMID:15034926","GOC:expert_rg","GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000226","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"anastral spindle assembly","termid":"GO:0055048"}


id: PBO:0064696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 32","termid":"PBO:0064696"}


id: PR:P79051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase rhp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.01c","synonyms":[{"name":"DNA repair protein rhp16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD16 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp16","type":"exact"}],"termid":"PR:P79051"}


id: GO:2000355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"negatively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ovarian follicle development","synonyms":[{"name":"negative regulation of follicular phase","type":"related"}],"termid":"GO:2000355"}


id: PBO:0079961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 X-linked","termid":"PBO:0079961"}


id: PBO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 2","termid":"PBO:0040026"}


id: GO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a club cell. A club cell is an unciliated epithelial cell found in the respiratory and terminal bronchioles.","definition_xrefs":["PMID:28144783","GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung epithelial cell differentiation","termid":"GO:0060487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"club cell differentiation","synonyms":[{"name":"Clara cell differentiation","type":"exact"}],"termid":"GO:0060486"}


id: PBO:0034359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syngeny_relationship_with","termid":"PBO:0034359"}


id: PBO:0090916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone","termid":"PBO:0090916"}


id: GO:0033313
data:
  {"annotated_genes":["SJAG_02771","SJAG_03026","SJAG_03529","SJAG_00364","SJAG_04126","SJAG_01680","SJAG_01837","SJAG_04287","SJAG_01082","SJAG_01330","SJAG_03438","SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110500,102311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[87476,102604,112064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[102605,76825,85127,110263,112065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[97815,102312,112686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[109795],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97355],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a meiotic cell cycle checkpoint that ensures accurate chromosome replication and segregation by preventing progression through a meiotic cell cycle until conditions are suitable for the cell to proceed to the next stage.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01680":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072411"],"synonyms":[{"name":"meiotic cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic cell cycle checkpoint","type":"exact"}],"termid":"GO:0033313","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0044778":null,"GO:0051598":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Relaying of environmental signals promoting filamentous growth.","definition_xrefs":["PMID:9728395","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction involved in filamentous growth","synonyms":[{"name":"MAPKKK cascade (pseudohyphal growth)","type":"related"},{"name":"signal transduction during filamentous growth","type":"related"}],"termid":"GO:0001402"}


id: PBO:0088105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; involved in the pyrimidine salvage and nicotinamide riboside salvage pathways","termid":"PBO:0088105"}


id: PBO:0084579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR100W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR098W","termid":"PBO:0084579"}


id: PBO:0080733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing oxidoreductase","termid":"PBO:0080733"}


id: PBO:0000311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase (predicted)","termid":"PBO:0000311"}


id: PBO:0038905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D2","termid":"PBO:0038905"}


id: PBO:0056181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor G","termid":"PBO:0056181"}


id: GO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus of the pronephric kidney over time from its initial formation until its mature state. The pronephric glomerulus is part of the pronephric nephron and is restricted to one body segment.","definition_xrefs":["ZFA:00001557","GOC:dgh","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric glomerulus development","termid":"GO:0039021"}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: GO:0009375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of reduced ferredoxin. Hydrogenase contains iron-sulfur clusters, and some contain nickel; it can use molecular hydrogen for the reduction of a variety of substances.","definition_xrefs":["PMID:12792025","PMID:9836629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ferredoxin hydrogenase complex","termid":"GO:0009375"}


id: GO:1902041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","synonyms":[{"name":"regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902041"}


id: PBO:0017704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4 nonhomologous end joining factor Xrc4","termid":"PBO:0017704"}


id: GO:1900018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.","definition_xrefs":["GOC:TermGenie","PMID:19666497","PMID:10594013","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex (obsolete GO:1900018)","termid":"GO:1900018"}


id: GO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of direction of cell growth","termid":"GO:0061390"}


id: FYPO:0006112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0008212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"abolished silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0006112"}


id: GO:0008826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfinoalanine = L-alanine + sulfite.","definition_xrefs":["RHEA:28278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cysteine sulfinate desulfinase activity","secondary_identifiers":["MetaCyc:RXN0-279"],"synonyms":[{"name":"cysteine sulphinate desulphinase activity","type":"exact"}],"termid":"GO:0008826"}


id: MOD:01627
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms L-cysteinyl-L-selenocysteine either by the natural process of cross-linking an L-cysteine residue and an L-selenocysteine residue, or by the hypothetical process of substituting a selenium for a sulfur atom in cystine.","definition_xrefs":["PubMed:18688235","PubMed:12911312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}


id: GO:0009895
data:
  {"annotated_genes":["SJAG_02573","SJAG_04946","SJAG_03048","SJAG_03448","SJAG_03371","SJAG_03883","SJAG_04586","SJAG_01331","SJAG_03696","SJAG_00052","SJAG_00797","SJAG_00685","SJAG_00457","SJAG_05314","SJAG_03283","SJAG_02723","SJAG_04825","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77571,86252,96115,114304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[92294,85550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[98381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[105260,114357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010507"},{"annotations":[74925,72107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[102644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[85151,85551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[86460,102947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[102300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902369"},{"annotations":[86693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"negatively_regulates","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00457":null,"SJAG_00475":null,"SJAG_00685":null,"SJAG_00797":null,"SJAG_01331":null,"SJAG_02573":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03283":null,"SJAG_03371":null,"SJAG_03448":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of catabolic process","type":"exact"},{"name":"down-regulation of catabolic process","type":"exact"},{"name":"downregulation of catabolic process","type":"exact"},{"name":"inhibition of catabolic process","type":"narrow"},{"name":"negative regulation of breakdown","type":"exact"},{"name":"negative regulation of catabolism","type":"exact"},{"name":"negative regulation of degradation","type":"exact"}],"termid":"GO:0009895","terms_by_termid":{"GO:0010507":null,"GO:0016242":null,"GO:0032435":null,"GO:0045820":null,"GO:0048255":null,"GO:0070935":null,"GO:0090669":null,"GO:0120271":null,"GO:1902369":null,"GO:1902373":null,"GO:1905785":null}}


id: PBO:0077185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR8 antisense RNA 1","termid":"PBO:0077185"}


id: PBO:0039494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A17, pseudogene","termid":"PBO:0039494"}


id: PBO:0045888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma","termid":"PBO:0045888"}


id: PR:Q1MTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcf1 gene.","definition_xrefs":["UniProtKB:Q1MTN9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit rlf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.03c","synonyms":[{"name":"Spom972h-pcf1","type":"exact"}],"termid":"PR:Q1MTN9"}


id: GO:0180018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}


id: PBO:0068630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 10, pseudogene","termid":"PBO:0068630"}


id: PBO:0068046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 351","termid":"PBO:0068046"}


id: PBO:0079882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3A","termid":"PBO:0079882"}


id: PBO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 2","termid":"PBO:0052420"}


id: GO:0030549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"},{"relation_name":"is_a","term_name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"acetylcholine receptor activator activity","termid":"GO:0030549"}


id: FYPO:0001428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic DNA replication initiation","termid":"FYPO:0005107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal negative regulation of mitotic DNA replication initiation","synonyms":[{"name":"normal negative regulation of DNA replication initiation during mitotic cell cycle","type":"related"},{"name":"normal negative regulation of DNA replication initiation during vegetative growth","type":"exact"},{"name":"normal negative regulation of initiation of DNA replication initiation","type":"exact"}],"termid":"FYPO:0001428"}


id: PBO:0063781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 6","termid":"PBO:0063781"}


id: FYPO:0002757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of quinidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to quinidine","synonyms":[{"name":"resistance to quinidine during mitotic cell cycle","type":"related"},{"name":"resistance to quinidine during vegetative growth","type":"exact"},{"name":"resistant to quinidine","type":"exact"}],"termid":"FYPO:0002757"}


id: PBO:0072082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 12","termid":"PBO:0072082"}


id: PBO:0058735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6860","termid":"PBO:0058735"}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18037263","PMID:29571981","PMID:19801898","PMID:11805081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0039651","GO:0060139","GO:0033669","GO:0052030"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


id: PBO:0072031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 1","termid":"PBO:0072031"}


id: PBO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 19","termid":"PBO:0071017"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: PBO:0027747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_regulation_of_mitotic_cell_cycle_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027747"}


id: PBO:0068399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 216 pseudogene 1","termid":"PBO:0068399"}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: GO:0018520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate + NADP+ = 4-methylcatechol + NADPH + H+ + CO2.","definition_xrefs":["EC:1.3.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0179","MetaCyc:1.3.1.67-RXN"],"synonyms":[{"name":"4-methylcyclohexa-3,5-diene-1,2-cis-diol-1-carboxylic acid dehydrogenase activity","type":"exact"},{"name":"cis-1,2-dihydroxy-4-methylcyclohexa-3,5-diene-1-carboxylate:NAD(P)+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018520"}


id: FYECO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with uracil as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, uracil nitrogen source","termid":"FYECO:0000276"}


id: PBO:0045402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 4","termid":"PBO:0045402"}


id: PBO:0063257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 3","termid":"PBO:0063257"}


id: FYPO:0002284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide (obsolete FYPO:0002284)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to H2O2","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"protein tyrosine phosphorylation abolished during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002284"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: GO:0006169
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112856],"is_not":false,"summary":null,"term":"GO:0006169"}]},"cv_name":"biological_process","definition":"Any process that generates adenosine, adenine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside salvage","termid":"GO:0006166"},{"relation_name":"is_a","term_name":"adenosine biosynthetic process","termid":"GO:0046086"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"adenosine salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006169","terms_by_termid":{"GO:0006169":null}}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["PMID:4338436","GOC:kp","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: PATO:0002245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A force which relative high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased force","synonyms":[{"name":"increased force amplitude","type":"exact"}],"termid":"PATO:0002245"}


id: PBO:0080865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 6","termid":"PBO:0080865"}


id: GO:1901311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of gene expression involved in extracellular matrix organization.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of gene expression involved in extracellular matrix organization (obsolete GO:1901311)","synonyms":[{"name":"regulation of expression of extracellular matrix proteins","type":"exact"},{"name":"regulation of extracellular matrix protein production","type":"related"}],"termid":"GO:1901311"}


id: PBO:0074633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 27","termid":"PBO:0074633"}


id: PBO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit, guanyl-nucleotide exchange factor (eEF1B)","termid":"PBO:0018187"}


id: FYPO:0005907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to heat","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to heat","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0005907"}


id: PBO:0085440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polynucleotide kinase present on rDNA; required for efficient transcription termination by RNA polymerase I; functions with Las1p in a conserved mechanism to cleave pre-rRNA at a specific site during rRNA processing and ribosome biogenesis; required for cell growth; mRNA is cell-cycle regulated","termid":"PBO:0085440"}


id: PBO:0074277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIRP. pseudogene 1","termid":"PBO:0074277"}


id: GO:0016226
data:
  {"annotated_genes":["SJAG_02457","SJAG_00186","SJAG_00066","SJAG_00455","SJAG_01417","SJAG_02994","SJAG_02895","SJAG_00894","SJAG_00532","SJAG_04397","SJAG_01238","SJAG_03222","SJAG_00972","SJAG_01615","SJAG_03701","SJAG_02866","SJAG_04016","SJAG_02306","SJAG_03862","SJAG_04014","SJAG_01063","SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67690,85337,89001,96055,100763,110766],"is_not":false,"summary":null,"term":"GO:0016226"},{"annotations":[97628,102876,109886,99120,95265,88999,94298,105683,105875,84985,89227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[113853,88819,105244,105862,84296,97629,94956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:jl","GOC:pde","GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"iron-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"iron-sulfur cluster biosynthesis","type":"related"},{"name":"iron-sulphur cluster assembly","type":"exact"}],"termid":"GO:0016226","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: GO:2000215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"negatively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of proline metabolic process","synonyms":[{"name":"negative regulation of proline metabolism","type":"exact"}],"termid":"GO:2000215"}


id: PBO:0029629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_meiotic_chromosomes","termid":"PBO:0029629"}


id: CHEBI:16976
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hygromycin B","termid":"CHEBI:16976"}


id: PBO:0046275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease subunit 2","termid":"PBO:0046275"}


id: PBO:0031478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031478"}


id: FYPO:0004205
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115584],"is_not":false,"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased siRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature siRNA level","type":"exact"},{"name":"decreased siRNA accumulation","type":"related"},{"name":"decreased siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased siRNA level during vegetative growth","type":"exact"},{"name":"decreased siRNA transcript level","type":"exact"},{"name":"decreased small interfering RNA level","type":"exact"},{"name":"reduced siRNA level","type":"exact"}],"termid":"FYPO:0004205","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0016461
data:
  {"annotated_genes":["SJAG_04901","SJAG_04001","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99264,91411,92907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045160"}]},"cv_name":"cellular_component","definition":"A portmanteau term for myosins other than myosin II.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"unconventional myosin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005860"],"synonyms":[{"name":"non-muscle myosin","type":"related"}],"termid":"GO:0016461","terms_by_termid":{"GO:0045160":null}}


id: GO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 galanin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 galanin receptor binding","synonyms":[{"name":"type 1 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031764"}


id: PBO:0091740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam1","termid":"PBO:0091740"}


id: PBO:0090071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L11","termid":"PBO:0090071"}


id: PBO:0031094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sterile","termid":"PBO:0031094"}


id: PR:O74428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tco89 gene.","definition_xrefs":["UniProtKB:O74428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.12","synonyms":[{"name":"Spom972h-tco89","type":"exact"}],"termid":"PR:O74428"}


id: PBO:0091576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein adenylyltransferase SelO","termid":"PBO:0091576"}


id: PBO:0083391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF AIM9/YER080W","termid":"PBO:0083391"}


id: GO:0102313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) + H2O = 1,8-cineole + diphosphoric acid.","definition_xrefs":["RHEA:32543","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"1,8-cineole synthase activity","secondary_identifiers":["EC:4.2.3.108","MetaCyc:RXN-12980"],"termid":"GO:0102313"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: GO:1990045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sclerotium over time, from its formation to the mature structure. A sclerotium is a mycelial resting body, resistant to adverse environmental conditions.","definition_xrefs":["GOC:di","PMID:21148914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sclerotium development","termid":"GO:1990045"}


id: PBO:0026781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_progression_following_cellular_response_to_hydroxyurea","termid":"PBO:0026781"}


id: GO:0019678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylmalonyl pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"propionate metabolic process, methylmalonyl pathway","secondary_identifiers":["MetaCyc:PROPIONMET-PWY"],"synonyms":[{"name":"propionate metabolism, methylmalonyl pathway","type":"exact"}],"termid":"GO:0019678"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: GO:0046153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"eye pigment catabolic process","termid":"GO:0046151"},{"relation_name":"is_a","term_name":"ommochrome metabolic process","termid":"GO:0046152"},{"relation_name":"is_a","term_name":"ocellus pigment catabolic process","termid":"GO:0046159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ommochrome catabolic process","synonyms":[{"name":"ommochrome breakdown","type":"exact"},{"name":"ommochrome catabolism","type":"exact"},{"name":"ommochrome degradation","type":"exact"}],"termid":"GO:0046153"}


id: PBO:0058438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5002","termid":"PBO:0058438"}


id: GO:0038046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an enkephalin, and transmitting the signal across the membrane by activating an associated G-protein. A enkephalin is a pentapeptide (Tyr-Gly-Gly-Phe-Met or Tyr-Gly-Gly-Phe-Leu) involved in regulating nociception in the body.","definition_xrefs":["Wikipedia:Enkephalin","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"},{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled enkephalin receptor activity","synonyms":[{"name":"delta-opioid receptor activity","type":"related"},{"name":"enkephalin receptor activity","type":"broad"}],"termid":"GO:0038046"}


id: PBO:0003566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi2 (predicted)","termid":"PBO:0003566"}


id: PBO:0071529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 32","termid":"PBO:0071529"}


id: PBO:0091479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane fatty acid alpha-oxygenase Mpo1","termid":"PBO:0091479"}


id: PBO:0029198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation","termid":"PBO:0029198"}


id: GO:0008842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + a purine nucleoside = monophosphate + a purine mononucleotide.","definition_xrefs":["EC:2.7.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"diphosphate-purine nucleoside kinase activity","secondary_identifiers":["MetaCyc:2.7.1.143-RXN"],"synonyms":[{"name":"diphosphate-dependent nucleoside kinase activity","type":"related"},{"name":"diphosphate:purine nucleoside phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent nucleoside kinase activity","type":"related"},{"name":"pyrophosphate-purine nucleoside kinase activity","type":"related"}],"termid":"GO:0008842"}


id: GO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"nitrate efflux transmembrane transporter activity","termid":"GO:0010542"}


id: GO:1990703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi medial cisterna membrane (obsolete GO:1990703)","synonyms":[{"name":"integral component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990703"}


id: PBO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 51, pseudogene","termid":"PBO:0044425"}


id: GO:0005400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane transporter (obsolete GO:0005400)","synonyms":[{"name":"peroxisomal membrane transporter","type":"exact"}],"termid":"GO:0005400"}


id: PBO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 12","termid":"PBO:0050388"}


id: PATO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a substance by virtue of the amount of the bearer's there is mixed with another substance.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/concentration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"concentration of","synonyms":[{"name":"concentration","type":"exact"}],"termid":"PATO:0000033"}


id: GO:0031754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-1 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Edg-1 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-1 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031754"}


id: GO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring tensile strength","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030020"}


id: GO:0046081
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95012],"is_not":false,"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUTP metabolic process","termid":"GO:0046080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUTP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dUTP breakdown","type":"exact"},{"name":"dUTP catabolism","type":"exact"},{"name":"dUTP degradation","type":"exact"}],"termid":"GO:0046081","terms_by_termid":{"GO:0046081":null}}


id: GO:0035863
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95010],"is_not":false,"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dITP, a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dITP metabolic process","termid":"GO:0035862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dITP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate catabolic process","type":"exact"},{"name":"dITP breakdown","type":"exact"},{"name":"dITP catabolism","type":"exact"},{"name":"dITP degradation","type":"exact"},{"name":"deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) catabolic process","type":"exact"}],"termid":"GO:0035863","terms_by_termid":{"GO:0035863":null}}


id: GO:0010724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of definitive erythrocyte differentiation. Definitive erythrocyte differentiation occurs as part of the process of definitive hemopoiesis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"definitive erythrocyte differentiation","termid":"GO:0060318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of definitive erythrocyte differentiation","synonyms":[{"name":"regulation of definitive RBC differentiation","type":"exact"},{"name":"regulation of definitive erythropoiesis","type":"exact"},{"name":"regulation of definitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010724"}


id: PBO:0064491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I and III subunit D","termid":"PBO:0064491"}


id: FYPO:0005024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal along the chromosome arms. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","PMID:21633354","GO:1990891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid arm separation","synonyms":[{"name":"abnormal mitotic chromosome arm separation","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid arm separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005024"}


id: PBO:0059913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 36","termid":"PBO:0059913"}


id: GO:0071821
data:
  {"annotated_genes":["SJAG_02294","SJAG_02465","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96660,104148,113445],"is_not":false,"summary":null,"term":"GO:0071821"}]},"cv_name":"cellular_component","definition":"A protein complex contains the proteins FANCM and MHF, or their orthologs, plays an essential role in DNA remodeling, protects replication forks, and is conserved in eukaryotes.","definition_xrefs":["GOC:vw","PMID:20347428","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02294":null,"SJAG_02465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"FANCM-MHF complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071821","terms_by_termid":{"GO:0071821":null}}


id: PBO:0036376
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLUtamate requiring","termid":"PBO:0036376"}


id: PBO:0043040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chimerin 2","termid":"PBO:0043040"}


id: GO:0044275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbohydrate catabolic process (obsolete GO:0044275)","synonyms":[{"name":"cellular carbohydrate breakdown","type":"exact"},{"name":"cellular carbohydrate catabolism","type":"exact"},{"name":"cellular carbohydrate degradation","type":"exact"}],"termid":"GO:0044275"}


id: FYPO:0003494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to L-azetidine-2-carboxylic acid. Cells stop growing (and may die) at a concentration of L-azetidine-2-carboxylic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to L-azetidine-2-carboxylic acid","synonyms":[{"name":"hypersensitive to L-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to (S)-azetidine-2-carboxylic acid","type":"exact"},{"name":"sensitive to AZC","type":"broad"},{"name":"sensitive to L-azetidine-2-carboxylic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to L-azetidine-2-carboxylic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0003494"}


id: GO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-iodophenol + S-adenosyl-L-methionine = 1-iodo-2-methoxybenzene + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:14313","EC:2.1.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"iodophenol O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03746","MetaCyc:IODOPHENOL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-iodophenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030737"}


id: GO:0034513
data:
  {"annotated_genes":["SJAG_00566","SJAG_00083","SJAG_04754","SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86076,91400,97186,102284],"is_not":false,"summary":null,"term":"GO:0034513"}]},"cv_name":"molecular_function","definition":"Binding to a box H/ACA small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"box H/ACA snoRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034513","terms_by_termid":{"GO:0034513":null}}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: PBO:0048717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLRX5 pseudogene 3","termid":"PBO:0048717"}


id: CHEBI:17489
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"3',5'-cyclic purine nucleotide having having adenine as the nucleobase.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-cyclic AMP","secondary_identifiers":["CHEBI:19827","CHEBI:41588","CHEBI:1325","CHEBI:11673"],"termid":"CHEBI:17489"}


id: PBO:0054654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2059","termid":"PBO:0054654"}


id: PBO:0005009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 3","termid":"PBO:0005009"}


id: PBO:0063776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 3","termid":"PBO:0063776"}


id: GO:0071450
data:
  {"annotated_genes":["SJAG_05181","SJAG_04399","SJAG_04788","SJAG_01734","SJAG_04632","SJAG_00668","SJAG_03653","SJAG_04403","SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89174,58036,85469,95297,96180,85051,64544,106134,106091,67551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen radical","termid":"GO:0000305"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen radical","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0071450","terms_by_termid":{"GO:0019430":null}}


id: GO:0005482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle targeting (obsolete GO:0005482)","synonyms":[{"name":"vesicle targeting","type":"exact"}],"termid":"GO:0005482"}


id: PBO:0075457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 7","termid":"PBO:0075457"}


id: PBO:0059327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S2","termid":"PBO:0059327"}


id: PBO:0087292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing protein; interacts with Sir2p, Sir4p, and histone H3/H4 tails to establish transcriptionally silent chromatin; required for spreading of silenced chromatin; recruited to chromatin through interaction with Rap1p; C-terminus assumes variant winged helix-turn-helix (wH) fold that mediates homodimerization, which is critical for holo-SIR complex loading; required for telomere hypercluster formation in quiescent yeast cells; has paralog ORC1 from whole genome duplication","termid":"PBO:0087292"}


id: PBO:0044021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 3","termid":"PBO:0044021"}


id: PBO:0074095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A9 and RAB7B antisense RNA 1","termid":"PBO:0074095"}


id: PBO:0032712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032712"}


id: PBO:0086110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene","termid":"PBO:0086110"}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01110","PANTHER:PTHR11140:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: PBO:0026907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0026907"}


id: FYPO:0004422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation","termid":"FYPO:0004422"}


id: GO:0030643
data:
  {"annotated_genes":["SJAG_04242","SJAG_01000","SJAG_01713","SJAG_00232","SJAG_03519","SJAG_05325","SJAG_03624","SJAG_03644","SJAG_04870","SJAG_03061","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84787,88178,93228,96077,98609,98610,98611,103579,103697,105032,110604,111050],"is_not":false,"summary":null,"term":"GO:0030643"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of phosphate ions within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion homeostasis","termid":"GO:0055062"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00232":null,"SJAG_00244":null,"SJAG_01000":null,"SJAG_01713":null,"SJAG_03061":null,"SJAG_03519":null,"SJAG_03624":null,"SJAG_03644":null,"SJAG_04242":null,"SJAG_04870":null,"SJAG_05325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular phosphate ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular phosphate ion homeostasis","type":"exact"},{"name":"intracellular Pi homeostasis","type":"exact"},{"name":"intracellular phosphate homeostasis","type":"broad"}],"termid":"GO:0030643","terms_by_termid":{"GO:0030643":null}}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: PBO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 6, pseudogene","termid":"PBO:0050641"}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: GO:0052840
data:
  {"annotated_genes":["SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101191],"is_not":false,"summary":null,"term":"GO:0052840"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol tetrakisphosphate + H2O = 1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10963","Reactome:R-HSA-1855166"],"termid":"GO:0052840","terms_by_termid":{"GO:0052840":null}}


id: GO:0033040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with soluble sour compounds to initiate a change in cell activity. These receptors are responsible for the sense of sour taste.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sour taste receptor activity","termid":"GO:0033040"}


id: GO:0046836
data:
  {"annotated_genes":["SJAG_02897","SJAG_03774"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90473,108559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glycolipid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0046836","terms_by_termid":{"GO:0034203":null}}


id: PBO:0067503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 643, pseudogene","termid":"PBO:0067503"}


id: PBO:0069494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 761, pseudogene","termid":"PBO:0069494"}


id: GO:0051453
data:
  {"annotated_genes":["SJAG_01669","SJAG_02023","SJAG_04616","SJAG_04955","SJAG_05294","SJAG_00136","SJAG_01129","SJAG_01397","SJAG_01913","SJAG_01817","SJAG_04258","SJAG_02716","SJAG_00516","SJAG_00301","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83776,83777,94845,109781],"is_not":false,"summary":null,"term":"GO:0051453"},{"annotations":[114718,97657,84113,85383,91700,96036,85912,98003,94938,99924,86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular pH","termid":"GO:0030641"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00301":null,"SJAG_00516":null,"SJAG_01129":null,"SJAG_01397":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02716":null,"SJAG_04258":null,"SJAG_04616":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular pH","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell pH regulation","type":"exact"},{"name":"cellular pH regulation","type":"exact"},{"name":"pH regulation in cell","type":"exact"},{"name":"regulation of cell pH","type":"exact"}],"termid":"GO:0051453","terms_by_termid":{"GO:0007035":null,"GO:0051453":null}}


id: PBO:0083112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA photolyase involved in photoreactivation; repairs pyrimidine dimers in the presence of visible light; induced by DNA damage; regulated by transcriptional repressor Rph1p","termid":"PBO:0083112"}


id: GO:0048660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation.","definition_xrefs":["CL:0000192","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell proliferation","synonyms":[{"name":"regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048660"}


id: PBO:0051717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like 4","termid":"PBO:0051717"}


id: PR:P28706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein complementing XP-G cells that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.08c","secondary_identifiers":["UniProtKB:P28706"],"synonyms":[{"name":"SPBC3E7.08c","type":"related"},{"name":"Spom972h-ERCC5","type":"exact"}],"termid":"PR:P28706"}


id: PBO:0066671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPPLY3 pseudogene 1","termid":"PBO:0066671"}


id: GO:0032695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-12 production","termid":"GO:0032655"},{"relation_name":"negatively_regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-12 production","secondary_identifiers":["GO:2001183","GO:0045083"],"synonyms":[{"name":"down regulation of interleukin-12 production","type":"exact"},{"name":"down-regulation of interleukin-12 production","type":"exact"},{"name":"downregulation of interleukin-12 production","type":"exact"},{"name":"inhibition of interleukin-12 production","type":"narrow"},{"name":"negative regulation of CLMF production","type":"related"},{"name":"negative regulation of IL-12 production","type":"exact"},{"name":"negative regulation of NKSF production","type":"related"},{"name":"negative regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032695"}


id: GO:0099157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Transynaptic signaling in which the ligand is carried across the synapse by an exosome.","definition_xrefs":["GOC:dos","PMID:19837038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling via exosome","termid":"GO:0099156"},{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling via exosome","synonyms":[{"name":"exosome mediated transynaptic signalling","type":"exact"},{"name":"trans-synaptic signalling via exosome","type":"exact"}],"termid":"GO:0099157"}


id: GO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment containing crystals of phytic acid and proteins characteristic of a lytic vacuole, found within a storage vacuole.","definition_xrefs":["PMID:11739490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"lytic vacuole within protein storage vacuole","termid":"GO:0000327"}


id: PBO:0079701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 2","termid":"PBO:0079701"}


id: GO:1990498
data:
  {"annotated_genes":["SJAG_01330","SJAG_02761","SJAG_00918","SJAG_01613","SJAG_03540","SJAG_02624","SJAG_01224","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96396,97442,102307,114646],"is_not":false,"summary":null,"term":"GO:1990498"},{"annotations":[103499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[94645,95239,114128,103500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"}]},"cv_name":"cellular_component","definition":"Any microtubule that is part of a mitotic spindle; anchored at one spindle pole.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01224":null,"SJAG_01330":null,"SJAG_01613":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0072686","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990498","terms_by_termid":{"GO:1990498":null,"GO:1990537":null,"GO:1990941":null}}


id: PBO:0080835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ybeY metalloendoribonuclease","termid":"PBO:0080835"}


id: PBO:0039569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 63","termid":"PBO:0039569"}


id: PBO:0040909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 13","termid":"PBO:0040909"}


id: PBO:0054730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2139","termid":"PBO:0054730"}


id: GO:0055008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac muscle tissue are generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue morphogenesis","synonyms":[{"name":"heart muscle morphogenesis","type":"exact"},{"name":"myocardium morphogenesis","type":"broad"}],"termid":"GO:0055008"}


id: GO:0042765
data:
  {"annotated_genes":["SJAG_05278","SJAG_03292","SJAG_02776","SJAG_00846","SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83516,87443,88268,99725,109953],"is_not":false,"summary":null,"term":"GO:0042765"}]},"cv_name":"cellular_component","definition":"An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor.","definition_xrefs":["PMID:12802054","GOC:jl","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005783","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"GPI-anchor transamidase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPIT complex","type":"exact"}],"termid":"GO:0042765","terms_by_termid":{"GO:0042765":null}}


id: PATO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000092 abiotic stress sensitivity (obsolete PATO:0000092)","termid":"PATO:0000092"}


id: PBO:0041969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC12 pseudogene 1","termid":"PBO:0041969"}


id: GO:0046033
data:
  {"annotated_genes":["SJAG_00044","SJAG_04123","SJAG_02038","SJAG_01859","SJAG_01070","SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94166,97831],"is_not":false,"summary":null,"term":"GO:0046033"},{"annotations":[84948,99435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[89578,112857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02850":null,"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"AMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP metabolism","type":"exact"},{"name":"adenylate forming enzyme activity","type":"related"}],"termid":"GO:0046033","terms_by_termid":{"GO:0044208":null,"GO:0044209":null,"GO:0046033":null}}


id: MOD:00472
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["URL:http://dx.doi.org/10.1002/rcm.517","PubMed:11746907","Unimod:94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMID d0","synonyms":[{"name":"IMID","type":"related"},{"name":"IMID d0","type":"related"}],"termid":"MOD:00472"}


id: PBO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc2/Med1","termid":"PBO:0000440"}


id: PBO:0079937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream transcription factor 2, c-fos interacting","termid":"PBO:0079937"}


id: PBO:0073599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1","termid":"PBO:0073599"}


id: PATO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiopacity that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radiopacity","termid":"PATO:0002136"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased radiopacity","termid":"PATO:0002144"}


id: PBO:0079864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 1","termid":"PBO:0079864"}


id: GO:0021828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a gonadotrophin-releasing hormone producing neuron from the nasal placode to the hypothalamus.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"hypothalamic tangential migration using cell-axon interactions","termid":"GO:0021856"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron development","termid":"GO:0021888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadotrophin-releasing hormone neuronal migration to the hypothalamus","secondary_identifiers":["GO:0021857"],"synonyms":[{"name":"gonadotropin-releasing hormone neuronal migration to the hypothalamus","type":"exact"}],"termid":"GO:0021828"}


id: PBO:0083684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal subunit of membrane-associated retromer complex; required for retrograde transport; receptor that recognizes retrieval signals on cargo proteins, forms subcomplex with Vps26p and Vps29p that selects cargo proteins for retrieval; interacts with Ypt7p; overexpression of wild-type human VPS35 or Parkinson's-associated vps35-D686N or vps35-P299S variants complements Ni2+ resistance and Cd2+ sensitivity of yeast vps35 null mutant","termid":"PBO:0083684"}


id: PBO:0089194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0089194"}


id: PBO:0074376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 2","termid":"PBO:0074376"}


id: GO:0030041
data:
  {"annotated_genes":["SJAG_02245","SJAG_02700","SJAG_01268","SJAG_02566","SJAG_04479","SJAG_04100","SJAG_01993","SJAG_03086","SJAG_00279","SJAG_00677","SJAG_01894","SJAG_04982","SJAG_00521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64160,88366,89869,93759,94858],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[84331,88367,110325,94919],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[85894,97770,98754,86733,101161],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93762,110328],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0065003","GO:0030036"],"is_obsolete":false,"name":"actin filament polymerization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin polymerization","type":"exact"},{"name":"actin polymerizing activity","type":"related"}],"termid":"GO:0030041","terms_by_termid":{"GO:0030041":null,"GO:0030833":null,"GO:0042989":null,"GO:0051016":null}}


id: GO:0097141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BIM-BCL-2 complex","termid":"GO:0097141"}


id: FYPO:0004344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability upon nitrogen starvation","synonyms":[{"name":"increased cell population viability upon nitrogen starvation","type":"exact"},{"name":"increased viability during nitrogen starvation","type":"exact"},{"name":"increased viability upon nitrogen depletion","type":"exact"},{"name":"increased viability upon nitrogen deprivation","type":"exact"}],"termid":"FYPO:0004344"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115537],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[115119,115120,115131,115134,115122],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["GO:0007029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_02763","SJAG_03940","SJAG_01906"],"single_locus_genotype_uniquenames":["nem1delta","ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0084334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein; tracks plus-ends and stabilizes microtubules; required for mitotic spindle assembly, chromosome segregation, and 2 micron plasmid partitioning; functionally redundant with Cin8p for chromosomal but not plasmid functions","termid":"PBO:0084334"}


id: GO:1905547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of subtelomeric heterochromatin assembly.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:25819580","GOC:BHF_telomere","GO_REF:0000058","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of subtelomeric heterochromatin assembly (obsolete GO:1905547)","synonyms":[{"name":"regulation of telomeric heterochromatin assembly","type":"related"},{"name":"regulation of telomeric heterochromatin formation","type":"related"}],"termid":"GO:1905547"}


id: PBO:0000652
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.22.-","termid":"PBO:0000652"}


id: PBO:0043332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal liver metastasis associated transcript 3","termid":"PBO:0043332"}


id: PBO:0058154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4449","termid":"PBO:0058154"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity (obsolete GO:0034571)","termid":"GO:0034571"}


id: PBO:0085211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding phosphatidylserine transferase; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication","termid":"PBO:0085211"}


id: PBO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec24","termid":"PBO:0002795"}


id: GO:1901462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"positively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to formic acid","synonyms":[{"name":"activation of response to formic acid","type":"narrow"},{"name":"up regulation of response to formic acid","type":"exact"},{"name":"up-regulation of response to formic acid","type":"exact"},{"name":"upregulation of response to formic acid","type":"exact"}],"termid":"GO:1901462"}


id: PBO:0064147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 divergent transcript","termid":"PBO:0064147"}


id: PBO:0079460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-golgi network vesicle protein 23 homolog B","termid":"PBO:0079460"}


id: PR:O74501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs130 gene.","definition_xrefs":["UniProtKB:O74501","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CC285.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.14","synonyms":[{"name":"Spom972h-trs130","type":"exact"}],"termid":"PR:O74501"}


